cluster # 12648

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Oryza sativa
cluster # 12648 cluster # 12648 Sequences # 11 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12648#0 length = 1645 sequences # 4
consensus_12648#1 length = 966 sequences # 2
consensus_12648#2 length = 712 sequences # 2

consensus_12648#3 length = 706 sequences # 1
consensus_12648#4 length = 555 sequences # 1
consensus_12648#5 length = 440 sequences # 1

consensusID : consensus_12648#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1645
fasta sequence

                              [TCCTCCCTCCCTCGTGGCCTCCTCTCTCCAGATCCACATCCTCTCCTCCTCCCAAGCTGTTCGGTGGCACGGCCGCGACGAAGGGAGGCGGACGTCGGGGGGCGCGACGATGGCGACTGCGACGGGATGGCGACGGGGGCCGCGGCGAAGGGAGGCGGTCGTCGTGGGGCGCGACGATGGCGACTGCGACGGGGGGCGCCGCCGCCTAGTCCCAGCTCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTCGGCCGCCGCCACCACCCCCTCTCCCTCTCTCAGATCTGGCGCGCGGGGAGCGATGGCAGTGGCGTCGTCGAGGCGGAGGCTGCGGCGGGGCTCGGTAGCGGCGGCGTCAAGGCGGATCCGGCGGTGGTGGTTCTCACCGGCCACTTCAAGGACGACGACGGCAACCTCCGCAGCTGGTTGGGTTCAGCAGCTGCTGTTCTTGCGATGAGGCAATGGGTGATGCTGGGAACATTTTTTTTTCTGCAGGATCGACAATATCGTTGGCCCTCTTAAGAACGCGCTTGCGAAAATTGGTTTTCGCCAGGCGGTTTTATGACCGCTTGTGAAAAGCAATGATTTTCTCTGGCCTTTACTTATTGGCGGGCTGCTCAGCCGCCAGCACATACCACTTTTTGCCGCCGGCGTAAATTTTTTCGTAGTAGTGTACCTTTTCTTTTCTGAAAAAAACATTACATTATTTGAATGACTTGAAAAAGATGAGTGTACGTGCACGCACTTAGGTCGTAAAGAGATTGTCTCCATTTTAAACTCGGTCACTCGGAAGTATTTATGATGTTGGCTGTTTGTTGTTCATTCCATGAGTGCACTTTCAGGGAACGTGCAGTTTTTTTTTCTTCTGAACATTTCAAACTGTGCTATAGTCAAATACAAAGATTTTTTTTCCCGTTTTATTCATCCTTCAAGAGTACACAACAGATCATGCTCAGGATTTAAATAGG-TTTACATTATCCCGCCAAGAAAAAAAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACAATTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACAACGAGCCCTTCGTCTCCGCCACCGCCGGTCACAATGCTGCAGGAAACATGCACGGGCTTGCTGCCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCGCTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTCCCCGCCGGCGGCGTCGACGACGACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCCTTGTCGACGCAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCGCTGCCGCTGCAGTA]

[+] EMBL AK099958             [TCCTCCCTCCCTCGTGGCCTCCTCTCTCCAGATCCACATCCTCTCCTCCTCCCAAGCTGTTCGGTGGCACGGCCGCGACGAAGGGAGGCGGACGTCGGGGGGCGCGACGATGGCGACTGCGACGGGATGGCGACGGGGGCCGCGGCGAAGGGAGGCGGTCGTCGTGGGGCGCGACGATGGCGACTGCGACGGGGGGCGCCGCCGCCTAGTCCCAGCTCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTCGGCCGCCGCCACCACCCCCTCTCCCTCTCTCAGATCTGGCGCGCGGGGAGCGATGGCAGTGGCGTCGTCGAGGCGGAGGCTGCGGCGGGGCTCGGTAGCGGCGGCGTCAAGGCGGATCCGGCGGTGGTGGTTCTCACCGGCCACTTCAAGGACGACGACGGCAACCTCCGCAGCTGGTTGGGTTCAGCAGCTGCTGTTCTTGCGATGAGGCAATGGGTGATGCTGGGAACATTTTTTTTTCTGCAGGATCGACAATATCGTTGGCCCTCTTAAGAACGCGCTTGCGAAAATTGGTTTTCGCCAGGCGGTTTTATGACCGCTTGTGAAAAGCAATGATTTTCTCTGGCCTTTACTTATTGGCGGGCTGCTCAGCCGCCAGCACATACCACTTTTTGCCGCCGGCGTAAATTTTTTCGTAGTAGTGTACCTTTTCTTTTCTGAAAAAAACATTACATTATTTGAATGACTTGAAAAAGATGAGTGTACGTGCACGCACTTAGGTCGTAAAGAGATTGTCTCCATTTTAAACTCGGTCACTCGGAAGTATTTATGATGTTGGCTGTTTGTTGTTCATTCCATGAGTGCACTTTCAGGGAACGTGCAGTTTTTTTTTCTTCTGAACATTTCAAACTGTGCTATAGTCAAATACAAAGATTTTTTTTCCCGTTTTATTCATCCTTCAAGAGTACACAACAGATCATGCTCAGGATTTAAATAGG TTTACATTATCCCGCCAAGAAAAAAAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATGTTATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK071925             [TCCTCCCTCCCTCGTGGCCTCCTCTCTCCAGATCCACATCCTCTCCTCCTCCCAAGCTGTTCGGTGGCACGGCCGCGACGAAGGGAGGCGGACGTCGGGGGGCGCGACGATGGCGACTGCGACGGGATGGCGACGGGGGCCGCGGCGAAGGGAGGCGGTCGTCGTGGGGCGCGACGATGGCGACTGCGACGGGGGGCGCCGCCGCCTAGTCCCAGCTCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTCGGCCGCCGCCACCACCCCCTCTCCCTCTCTCAGATCTGGCGCGCGGGGAGCGATGGCAGTGGCGTCGTCGAGGCGGAGGCTGCGGCGGGGCTCGGTAGCGGCGGCGTCAAGGCGGATCCGGCGGTGGTGGTTCTCACCGGCCACTTCAAGGACGACGACGGCAACCTCCGCAGCTGGTTGGGTTCAGCAGCTGCTGTTCTTGCGATGAGGCAATGGGTGATGCTGGGAACATTTTTTTTTCTGCAGGATCGACAATATCGTTGGCCCTCTTAAGAACGCGCTTGCGAAAATTGGTTTTCG CAGGCGGTTTTATGACCGCTTGTGAAAAGCAATGATTTTCTCTGGCCTTTACTTATTGGCGGGCTGCTCAGCCGCCAGCACATACCACTTTTTGCCGCCGGCGTAAATTTTTTCGTAGTAGTGTACCTTTTCTTTTCTGAAAAAAACATTACATTATTTGAATGACTTGAAAAAGATGAGTGTACGTGCACGCACTTAGGTCGTAAAGAGATTGTCTCCATTTTAAACTCGGTCACTCGGAAGTATTTATGATGTTGGCTGTTTGTTGTTCATTCCATGAGTGCACTTTCAGGGAACGTGCAGTTTTTTTTTCTTCTGAACATTTCAAACTGTGCTATAGTCAAATACAAAGATTTTTTTTCCCGTTTTATTCATCCTTCAAGAGTACACAACAGATCATGCTCAGGATTTAAATAGG TTTACATTATCCCGCCAAGAAAAAAAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATGTTATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB655214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          cccTTTATACATCCTTCAATA TCCTCAACTCATCATGCACGGGATTTAAATAGGCGTTACATTATCCCGCCCA CAAAAAAAAAGGAAGGCTTACATTACATTGGTTTTCCATCTTGAACACTACAATCTCAGAAATTTATCACATTGCAACACTCCTAGGCATACCTAACAATAATGGGGACTCCCCCCCTCCCATAAAAACCAATCTAATACTTTCATCCCATACTAGATTGGTTTTTATGACATGAAAAAAATACTATGTTATTTTACAATTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACAACGAGCCCTTCGTCTCCGCCACCGCCGGTCACAATGCTGCAGGAAACATGCACGGGCTTGCTGCCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCGCTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTCCCCG                                                                                                                                             ]
[+] EMBL CB651333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTCAGGATTTAAATAGG TTTACATTATCCCGCCCAG  AAAAAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACGATTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACGACGAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAGACATGCACGGGCTTGCTGCCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCGCTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTCCCCGCCGGCGGCGTCGACGACGACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCCTTGTCGACGCAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCGCTGCCGCTGCAGTA]




>consensus_12648#0
TCCTCCCTCCCTCGTGGCCTCCTCTCTCCAGATCCACATCCTCTCCTCCTCCCAAGCTGT
TCGGTGGCACGGCCGCGACGAAGGGAGGCGGACGTCGGGGGGCGCGACGATGGCGACTGC
GACGGGATGGCGACGGGGGCCGCGGCGAAGGGAGGCGGTCGTCGTGGGGCGCGACGATGG
CGACTGCGACGGGGGGCGCCGCCGCCTAGTCCCAGCTCCTCTCCCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTCGGCCGCCGCCACCACCCCCTCTCCCT
CTCTCAGATCTGGCGCGCGGGGAGCGATGGCAGTGGCGTCGTCGAGGCGGAGGCTGCGGC
GGGGCTCGGTAGCGGCGGCGTCAAGGCGGATCCGGCGGTGGTGGTTCTCACCGGCCACTT
CAAGGACGACGACGGCAACCTCCGCAGCTGGTTGGGTTCAGCAGCTGCTGTTCTTGCGAT
GAGGCAATGGGTGATGCTGGGAACATTTTTTTTTCTGCAGGATCGACAATATCGTTGGCC
CTCTTAAGAACGCGCTTGCGAAAATTGGTTTTCGCCAGGCGGTTTTATGACCGCTTGTGA
AAAGCAATGATTTTCTCTGGCCTTTACTTATTGGCGGGCTGCTCAGCCGCCAGCACATAC
CACTTTTTGCCGCCGGCGTAAATTTTTTCGTAGTAGTGTACCTTTTCTTTTCTGAAAAAA
ACATTACATTATTTGAATGACTTGAAAAAGATGAGTGTACGTGCACGCACTTAGGTCGTA
AAGAGATTGTCTCCATTTTAAACTCGGTCACTCGGAAGTATTTATGATGTTGGCTGTTTG
TTGTTCATTCCATGAGTGCACTTTCAGGGAACGTGCAGTTTTTTTTTCTTCTGAACATTT
CAAACTGTGCTATAGTCAAATACAAAGATTTTTTTTCCCGTTTTATTCATCCTTCAAGAG
TACACAACAGATCATGCTCAGGATTTAAATAGGTTTACATTATCCCGCCAAGAAAAAAAA
AAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTC
TCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAA
CCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATG
TTATTTTACAATTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGC
CATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACAACGAGCCCTTCGTCTCC
GCCACCGCCGGTCACAATGCTGCAGGAAACATGCACGGGCTTGCTGCCCCTGAGCACCAG
CTCCTCCAGCCCCAGCTCGCTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGC
GCCACCACCGGGCGACGCCGTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTC
CCCGCCGGCGGCGTCGACGACGACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAG
CGCCTCGCTCGCCTTGTCGACGCAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCC
GTCCGCCGCCGCTGCCGCTGCAGTA

consensusID : consensus_12648#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 966
fasta sequence

                              [TCCTTCCTCCCTCGTCCCTCCAGATCCAGCACCTTCCTCTCCTCCTCCCCTCCTCCCAGGCGGCGTCGGCAGCAGCGGCGACTTCGGTAGCTTTGCACGGCGGCGACGGCGACGGCGACGGCTGCGTCAAGCGCAAGAGCAAGCCGCGGCAACAGCAAGAGCAAGCTGCGCCAGGCGGCGGGGGGCGGCTGCGGCCGCCGCGGCGAGGGAGGCGACGAGCAGGTGCCCCTGCCGTCGAGGTGACCCGGAGGTGCTGCGGGCGGGGAGGGCGTGCTGTGCGCGCCTCGGCTGCTCGGTGGCGCGGCTGCGACGAAGGGAGGCGGACGTCGGGGGGCGCGACGATGGCGACTGCGACGGGATGGCGACGGGGGCCGCGGCGAAGGGAGGCGTGGGGCGCGACGATGGCGACTGCGACGGGGCGCGCGGCGGCTGCGCCGACGGCTACTGCGACGGCGATGACTCCATCCGAGTCCCCTGCGGATCCGGCCACTTCAAGGACGACGACGGCAACCTCGAGCGGGTTCGCTGGCAATTCGATCAATCCTTGGGTTCAGCAGCTGCTGTTCTTCTCGCGATGAGGCGATGGGTGATGCTGGGATTGAAACGTTTTTTTGTTCTGCAATATCGTTGGCAAAATTAATTTTGATTTGTGATGTTGAANATGCACTGTGAGGCCAGCATATTTGAATCGATAAATGAATTTTTGATTGGGGTTTGTNNNNNAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGGGGGGGGGCCGCGGCCCCAAATCCCCCTAAAGGGAGCGTATTACCCCCCCCCTGCGCCGGTTTATAAACGTTGGGAGTGGAAAACCTGGGGTTACCCAAATTAATATGTTTGAGGCAATCCCCTTTTGCCAGTGTGGGTAAACAAAAAGAGCCCCCCCCG]

[+] EMBL BE040558             [TCCTTCCTCCCTCGTCCCTCCAGATCCAGCACCTTCCTCTCCTCCTCCCCTCCTCCCAGGCGGCGTCGGCAGCAGCGGCGACTTCGGTAGCTTTGCACGGCGGCGACGGCGACGGCGACGGCTGCGTCAAGCGCAAGAGCAAGCCGCGGCAACAGCAAGAGCAAGCTGCGCCAGGCGGCGGGGGGCGGCTGCGGCCGCCGCGGCGAGGGAGGCGACGAGCAGGTGCCCCTGCCGTCGAGGTGACCCGGAGGTGCTGCGGGCGGGGAGGGCGTGCTGTGCGCGCCTCGGCTGCTCGGTGGCGCGGCTGCGACGAAGGGAGGCGGACGTCGGGGGGCGCGACGATGGCGACTGCGACGGGATGGCGACGGGGGCCGCGGCGAAGGGAGGCGTGGGGCGCGACGATGGCGACTGCGACGGGGCGCGCGGCGGCTGCGCCGACGGCTACTGCGACGGCGATGACTCCATCCGAGTCCCCTGCGGATCCGGCCACTTCAAGGACGACGACGGCAACCTCGAGCGGGTTCGCTGGCAATTCGATCAATCCTTGGGTTCAGCAGCTGCTGTTCTTCTCGCGATGAGGCGATGGGTGATGCTGGGATTGAAACGTTTTTTTGTTCTGCAATATCGTTGGCAAAATTAATTTTGATTTGTGATGTTGAANATGCACTGTGAGGCCAGCATATTTGAATCGATAAATGAATTTTTGATTGGGGTTTGTNNNNNAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGGGGGGGGGCCGCGGCCCCAAATCCCCCTAAAGGGAGCGTATTACCCCCCCCCTGCGCCGGTTTATAAACGTTGGGAGTGGAAAACCTGGGGTTACCCAAATTAATATGTTTGAGGCAATCCCCTTTTGCCAGTGTGGGTAAACAAAAAGAGCCCCCCCCG]
[+] EMBL CA758159             [       TCCCTCGTCCCTCCAGATCCAGCACCTTCCTCTCCTCCTCCCCTCCTCCCAGGCGGCGTCGGCAGCAGCGGCGACTTCGGTAGCTTTGCACGGCGGCGACGGCGACGGCGACGGCTGCGTCAAGCGCAAGAGCAAGCCGCGGCAACAGCAAGAGCAAGCTGCGCCAGGCGGCGGGGGGCGGCTGCGGCCGCCGCGGCGAGGGAGGCGACGAGCAGGTGCCCCTGCCGTCGAGGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_12648#1
TCCTTCCTCCCTCGTCCCTCCAGATCCAGCACCTTCCTCTCCTCCTCCCCTCCTCCCAGG
CGGCGTCGGCAGCAGCGGCGACTTCGGTAGCTTTGCACGGCGGCGACGGCGACGGCGACG
GCTGCGTCAAGCGCAAGAGCAAGCCGCGGCAACAGCAAGAGCAAGCTGCGCCAGGCGGCG
GGGGGCGGCTGCGGCCGCCGCGGCGAGGGAGGCGACGAGCAGGTGCCCCTGCCGTCGAGG
TGACCCGGAGGTGCTGCGGGCGGGGAGGGCGTGCTGTGCGCGCCTCGGCTGCTCGGTGGC
GCGGCTGCGACGAAGGGAGGCGGACGTCGGGGGGCGCGACGATGGCGACTGCGACGGGAT
GGCGACGGGGGCCGCGGCGAAGGGAGGCGTGGGGCGCGACGATGGCGACTGCGACGGGGC
GCGCGGCGGCTGCGCCGACGGCTACTGCGACGGCGATGACTCCATCCGAGTCCCCTGCGG
ATCCGGCCACTTCAAGGACGACGACGGCAACCTCGAGCGGGTTCGCTGGCAATTCGATCA
ATCCTTGGGTTCAGCAGCTGCTGTTCTTCTCGCGATGAGGCGATGGGTGATGCTGGGATT
GAAACGTTTTTTTGTTCTGCAATATCGTTGGCAAAATTAATTTTGATTTGTGATGTTGAA
NATGCACTGTGAGGCCAGCATATTTGAATCGATAAATGAATTTTTGATTGGGGTTTGTNN
NNNAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCCCGGGGGGGGGCCGCGGCCCCAAATCCCCCTAAAGGG
AGCGTATTACCCCCCCCCTGCGCCGGTTTATAAACGTTGGGAGTGGAAAACCTGGGGTTA
CCCAAATTAATATGTTTGAGGCAATCCCCTTTTGCCAGTGTGGGTAAACAAAAAGAGCCC
CCCCCG

consensusID : consensus_12648#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 712
fasta sequence

                              [TTCCGAGTTTTTTTTTTTTTTTTTTTTTTTATCCTTCAAGAGTACACAACAGATCATGCTCAGGATTTAAATAGGTTTACATTATCCCGCCAAGAAAAAAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACGATTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACGACGAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAGACATGCACGGGCTTGCTGCCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCGCTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTCCCCGCCGGCGGCGTCGACGACGACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCCTTGTCGACGCAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCG]

[+] EMBL CB653673             [TTCCGAGTTTTTTTTTTTTTTTTTTTTTTTATCCTTCAAGAGTACACAACAGATCATGCTCAGGATTTAAATAGGTTTACATTATCCCGCCAAGAAAAAAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACGATTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACGACGAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAGACATGCACGGGCTTGCTGCCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCGCTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTCCCCGCCGGCGGCGTCGACGACGACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCCTTGTCGACGCAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCG]
[+] EMBL CB645129             [                                                                                                     AAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACGATTGTCATCAACATACACTTCTGCTTCTTCTTCTACTTGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACGACGAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAGACATGCACGGGCTTGCTGCCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCGCTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTCCCCGCCGGCGGCGTCGACGACGACGACCGAGAGCCTCGAC                                                                                           ]




>consensus_12648#2
TTCCGAGTTTTTTTTTTTTTTTTTTTTTTTATCCTTCAAGAGTACACAACAGATCATGCT
CAGGATTTAAATAGGTTTACATTATCCCGCCAAGAAAAAAAAAGGAAGGTTTACATTACA
TTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGT
CATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATC
CAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACGATTGTCATC
AACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGCCATGACAAGCAACGACCCA
GCGCCGTCGTCGGGCATCACGACGACGAGCCCTTCGTCTCCGCCACCGCCGGTCACGATG
CTGCAGGAGACATGCACGGGCTTGCTGCCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCG
CTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCC
GTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTCCCCGCCGGCGGCGTCGACG
ACGACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCCTTGTCG
ACGCAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCG

consensusID : consensus_12648#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 706
fasta sequence

                              [CTTTTTTTTTTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAAATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACGATTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACGACGAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAGACATGCACGGGCTTGCTGCCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCGCTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTCCCCGCCGGCGGCGTCGACGACGACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCCTTGTCGACGCAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCGCTGCCGCTGCAGTACCGGCCCTGAAGAGCACGGTCTCGGCGTCGCCGTCGCCGTCGCCGGCGAAGGAGTCGATCGGGACGGACCTGACGCGCTTGCGGGTGGTCTCCG]

[+] EMBL CB641501             [CTTTTTTTTTTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAAATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACGATTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACGACGAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAGACATGCACGGGCTTGCTGCCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCGCTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTCCCCGCCGGCGGCGTCGACGACGACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCCTTGTCGACGCAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCGCTGCCGCTGCAGTACCGGCCCTGAAGAGCACGGTCTCGGCGTCGCCGTCGCCGTCGCCGGCGAAGGAGTCGATCGGGACGGACCTGACGCGCTTGCGGGTGGTCTCCG]




>consensus_12648#3
CTTTTTTTTTTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGT
CGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGT
TTCATCCAATACTAAATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACGATT
GTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGCCATGACAAGCAAC
GACCCAGCGCCGTCGTCGGGCATCACGACGACGAGCCCTTCGTCTCCGCCACCGCCGGTC
ACGATGCTGCAGGAGACATGCACGGGCTTGCTGCCCCTGAGCACCAGCTCCTCCAGCCCC
AGCTCGCTCCACTGCACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGC
GACGCCGTGCACGTCTCGATGGTAGTCTTTCCGGCCAGGGAATCGTCCCCGCCGGCGGCG
TCGACGACGACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCC
TTGTCGACGCAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCGCT
GCCGCTGCAGTACCGGCCCTGAAGAGCACGGTCTCGGCGTCGCCGTCGCCGTCGCCGGCG
AAGGAGTCGATCGGGACGGACCTGACGCGCTTGCGGGTGGTCTCCG

consensusID : consensus_12648#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 555
fasta sequence

                              [TTTTTTTATTTTTTTTTTTGCTCAGGATTTAAATAGGTTTACATTATCCCGCCAAGAAAAAAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACGATTTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGGCATGACAAGCAAGAACCAGGCCGTCTGTCGGGCATCACGACAGACGAAGCCCTTCGTCTCCGCACCGCCGGTCACGATGCTGCAGGAGACATGCACGGTGCTTGCTGCCCCTGAGCACCAGATCCTCCAGCACCCAGACTACGCTCCACTGCAACGCTTCCAGCGAGGGCCGCCGGCTGGGGTGCCACCACCGGGGGAAGCCGTGCACGTCTCGATGGTAGTCTTTCCGGGGCAGGGAATCGTCCCCGCCG]

[-] EMBL BI801083             [TTTTTTTATTTTTTTTTTTGCTCAGGATTTAAATAGGTTTACATTATCCCGCCAAGAAAAAAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAAAAACCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACTATGTTATTTTACGATTTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGTGGGCATGACAAGCAAGAACCAGGCCGTCTGTCGGGCATCACGACAGACGAAGCCCTTCGTCTCCGCACCGCCGGTCACGATGCTGCAGGAGACATGCACGGTGCTTGCTGCCCCTGAGCACCAGATCCTCCAGCACCCAGACTACGCTCCACTGCAACGCTTCCAGCGAGGGCCGCCGGCTGGGGTGCCACCACCGGGGGAAGCCGTGCACGTCTCGATGGTAGTCTTTCCGGGGCAGGGAATCGTCCCCGCCG]




>consensus_12648#4
TTTTTTTATTTTTTTTTTTGCTCAGGATTTAAATAGGTTTACATTATCCCGCCAAGAAAA
AAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTT
CTCTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCCATAA
AAACCAATCTAATAGTTTCATCCAATACTAGATTGGTTTTTATGACATGAAGAAAATACT
ATGTTATTTTACGATTTGTCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAG
TGGGCATGACAAGCAAGAACCAGGCCGTCTGTCGGGCATCACGACAGACGAAGCCCTTCG
TCTCCGCACCGCCGGTCACGATGCTGCAGGAGACATGCACGGTGCTTGCTGCCCCTGAGC
ACCAGATCCTCCAGCACCCAGACTACGCTCCACTGCAACGCTTCCAGCGAGGGCCGCCGG
CTGGGGTGCCACCACCGGGGGAAGCCGTGCACGTCTCGATGGTAGTCTTTCCGGGGCAGG
GAATCGTCCCCGCCG

consensusID : consensus_12648#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 440
fasta sequence

                              [TTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGAACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAAGGGGTACTCGCTCCATCCCCATAAAAACCAATCTAAAAGTTTCGCCCAATACTAAATTGGTTTTTATGACCCGAAAAAAATACTATGTTATTTTACGATTGGCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGGGGCCATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACAATAAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAAACATGCACGGGCTTGCTGTCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCGCTCCACT]

[+] EMBL CA763061             [TTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAGGAAGGTTTACATTACATTGGTTTTCGATCTTGACGAGAACAATCTCTGAAATTTCTCTCATTGCAACAGTCGTAGTCATACATAACAATAAGGGGTACTCGCTCCATCCCCATAAAAACCAATCTAAAAGTTTCGCCCAATACTAAATTGGTTTTTATGACCCGAAAAAAATACTATGTTATTTTACGATTGGCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGGGGCCATGACAAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACAATAAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAAACATGCACGGGCTTGCTGTCCCTGAGCACCAGCTCCTCCAGCCCCAGCTCGCTCCACT]




>consensus_12648#5
TTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAGGAAG
GTTTACATTACATTGGTTTTCGATCTTGACGAGAACAATCTCTGAAATTTCTCTCATTGC
AACAGTCGTAGTCATACATAACAATAAGGGGTACTCGCTCCATCCCCATAAAAACCAATC
TAAAAGTTTCGCCCAATACTAAATTGGTTTTTATGACCCGAAAAAAATACTATGTTATTT
TACGATTGGCATCAACATACACATCTGCTTCTTCTTCTACTTGGGGAGAGGGGCCATGAC
AAGCAACGACCCAGCGCCGTCGTCGGGCATCACGACAATAAGCCCTTCGTCTCCGCCACC
GCCGGTCACGATGCTGCAGGAAACATGCACGGGCTTGCTGTCCCTGAGCACCAGCTCCTC
CAGCCCCAGCTCGCTCCACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      TCCTCCCTCCCTCGTGGCCTCCTCTCTCCAGATCCACATCCTCTCCTCCTCCCAAGCTGT 60
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      TCGGTGGCACGGCCGCGACGAAGGGAGGCGGACGTCGGGGGGCGCGACGATGGCGACTGC 120
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      GACGGGATGGCGACGGGGGCCGCGGCGAAGGGAGGCGGTCGTCGTGGGGCGCGACGATGG 180
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      CGACTGCGACGGGGGGCGCCGCCGCCTAGTCCCAGCTCCTCTCCCTCTCTCTCTCTCTCT 240
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTCGGCCGCCGCCACCACCCCCTCTCCCT 300
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      CTCTCAGATCTGGCGCGCGGGGAGCGATGGCAGTGGCGTCGTCGAGGCGGAGGCTGCGGC 360
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      GGGGCTCGGTAGCGGCGGCGTCAAGGCGGATCCGGCGGTGGTGGTTCTCACCGGCCACTT 420
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      CAAGGACGACGACGGCAACCTCCGCAGCTGGTTGGGTTCAGCAGCTGCTGTTCTTGCGAT 480
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      GAGGCAATGGGTGATGCTGGGAACATTTTTTTTTCTGCAGGATCGACAATATCGTTGGCC 540
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      CTCTTAAGAACGCGCTTGCGAAAATTGGTTTTCGCCAGGCGGTTTTATGACCGCTTGTGA 600
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      AAAGCAATGATTTTCTCTGGCCTTTACTTATTGGCGGGCTGCTCAGCCGCCAGCACATAC 660
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      CACTTTTTGCCGCCGGCGTAAATTTTTTCGTAGTAGTGTACCTTTTCTTTTCTGAAAAAA 720
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      ACATTACATTATTTGAATGACTTGAAAAAGATGAGTGTACGTGCACGCACTTAGGTCGTA 780
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      AAGAGATTGTCTCCATTTTAAACTCGGTCACTCGGAAGTATTTATGATGTTGGCTGTTTG 840
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      TTGTTCATTCCATGAGTGCACTTTCAGGGAACGTGCAGTTTTTTTTTCTTCTGAACATTT 900
consensus_12648#1      ------------------------------------------------------------
                                                                                   

consensus_12648#4      --------------------------------------------------------TTTT 4
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------TTCCGAGTTTTTTTTTTTTTTTTTTTTTTTATCCTTCAAGAG 42
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      CAAACTGTGCTATAGTCAAATACAAAGATTTTTTTTCCCGTTTTATTCATCCTTCAAGAG 960
consensus_12648#1      --TCCTTCCTCCCTCGTCCCTCCAGATCCAGCACCTTCCTCTCCTCCTCCCCTCCTCCCA 58
                                                                                   

consensus_12648#4      TTTATTTTTTTTTTTGCTCAGGATTTAAATAGGTTTACATTATCCCGCCAAGAAAAAAAA 64
consensus_12648#5      ------TTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAA 54
consensus_12648#2      TACACAACAGATCATGCTCAGGATTTAAATAGGTTTACATTATCCCGCCAAGAAAAAAAA 102
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      TACACAACAGATCATGCTCAGGATTTAAATAGGTTTACATTATCCCGCCAAGAAAAAAAA 1020
consensus_12648#1      GGCGGCGTCGGCAGCAGCGGCGACTTCGGTAGCTTTGCACGGCGGCGACGGCGACGGCGA 118
                                                                                   

consensus_12648#4      A-GGAAGGTTTA-CATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCT 122
consensus_12648#5      A-GGAAGGTTTA-CATTACATTGGTTTTCGATCTTGACGAGAACAATCTCTGAAATTTCT 112
consensus_12648#2      A-GGAAGGTTTA-CATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCT 160
consensus_12648#3      --------------CTTTTTTTTTTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCT 46
consensus_12648#0      AAGGAAGGTTTA-CATTACATTGGTTTTCGATCTTGACGAGTACAATCTCTGAAATTTCT 1079
consensus_12648#1      CGGCTGCGTCAAGCGCAAGAGCAAGCCGCGGCAACAGCAAGAGCAAGCTGCGCCAGGCGG 178
                                                   **       * **  *** **  *  *     

consensus_12648#4      CTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCC-ATAAA 181
consensus_12648#5      CTCATTGCAACAGTCGTAGTCATACATAACAATAAGGGGTACTCGCTCCATCCCCATAAA 172
consensus_12648#2      CTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCC-ATAAA 219
consensus_12648#3      CTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCC-ATAAA 105
consensus_12648#0      CTCATTGCAACAGTCGTAGTCATACATAACAATAATGTGTACTCGCTCCATCCC-ATAAA 1138
consensus_12648#1      CGGGGGGCGGCTGCGGCCGCCGCGGCGAGGGAGGCGACGAGCAGGTGCCCCTGCCGTCGA 238
                       *     **  * *  *  * *      *   *      *  *  *  **    *  *  *

consensus_12648#4      AACCAATCTAATA-GTTTCATCCAA--------TACTAGATTGGTTTTTATGACATGAAG 232
consensus_12648#5      AACCAATCTAAAA-GTTTCGCCCAA--------TACTAAATTGGTTTTTATGACCCGAAA 223
consensus_12648#2      AACCAATCTAATA-GTTTCATCCAA--------TACTAGATTGGTTTTTATGACATGAAG 270
consensus_12648#3      AACCAATCTAATA-GTTTCATCCAA--------TACTAAATTGGTTTTTATGACATGAAG 156
consensus_12648#0      AACCAATCTAATA-GTTTCATCCAA--------TACTAGATTGGTTTTTATGACATGAAG 1189
consensus_12648#1      GGTGACCCGGAGGTGCTGCGGGCGGGGAGGGCGTGCTGTGCGCGCCTCGGCTGCTCGGTG 298
                           *  *  *   * * *   *          * **      *  *      *  *   

consensus_12648#4      AAAATACTATGTTATTTTACGATTTGTCATCAACATACACATCTGCTTCTTCTTCTACT- 291
consensus_12648#5      AAAATACTATGTTATTTTACGATT-GGCATCAACATACACATCTGCTTCTTCTTCTACT- 281
consensus_12648#2      AAAATACTATGTTATTTTACGATT-GTCATCAACATACACATCTGCTTCTTCTTCTACT- 328
consensus_12648#3      AAAATACTATGTTATTTTACGATT-GTCATCAACATACACATCTGCTTCTTCTTCTACT- 214
consensus_12648#0      AAAATACTATGTTATTTTACAATT-GTCATCAACATACACATCTGCTTCTTCTTCTACT- 1247
consensus_12648#1      GCGCGGCTGCGACGAAGGGAGGCG-GACGTCGGGGGGCGCGACGATGGCGACTGCGACGG 357
                             **  *              * * **      * *  *     *  ** * **  

consensus_12648#4      --TGGGGAGAGTGGGCATGACAAGCAA-GAACCAG-GCCGTCTGTCGGGCATCACGACAG 347
consensus_12648#5      --TGGGGAGAGGGGCCATGACAAGCAACGACCCAGCGCCGTC-GTCGGGCATCACGACAA 338
consensus_12648#2      --TGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTC-GTCGGGCATCACGACGA 385
consensus_12648#3      --TGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTC-GTCGGGCATCACGACGA 271
consensus_12648#0      --TGGGGAGAGTGGCCATGACAAGCAACGACCCAGCGCCGTC-GTCGGGCATCACGACAA 1304
consensus_12648#1      GATGGCGACGGGGGCCGCGGCGAAGGGAGGCGTGGGGCGCGACGATGGCGACTGCGACGG 417
                         *** **  * ** *  * * *     *     * **     *  **  *   ****  

consensus_12648#4      ACGAAGCCCTTCGTCTCCGC-ACCGCCGGTCACGATGCTGCAGGAGACATGCACGGTGCT 406
consensus_12648#5      T--AAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAAACATGCACGG-GCT 395
consensus_12648#2      C--GAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAGACATGCACGG-GCT 442
consensus_12648#3      C--GAGCCCTTCGTCTCCGCCACCGCCGGTCACGATGCTGCAGGAGACATGCACGG-GCT 328
consensus_12648#0      C--GAGCCCTTCGTCTCCGCCACCGCCGGTCACAATGCTGCAGGAAACATGCACGG-GCT 1361
consensus_12648#1      G--GCGCGCGGCGGCTGCGCCGACGGCTACTGCGACGGCGATGACTCCATCCGAGTCCCC 475
                            ** *  ** ** ***   ** *     * * *  *  *    *** *  *   * 

consensus_12648#4      TGCTGCCCCTG-------AGCACCAGATCCTCCAGCACCCAGACTA--CGCT--CCACTG 455
consensus_12648#5      TGCTGTCCCTG-------AGCACCAGCTCCTCCAGC-CCCAGCT----CGCT--CCACT- 440
consensus_12648#2      TGCTGCCCCTG-------AGCACCAGCTCCTCCAGC-CCCAGCT----CGCT--CCACTG 488
consensus_12648#3      TGCTGCCCCTG-------AGCACCAGCTCCTCCAGC-CCCAGCT----CGCT--CCACTG 374
consensus_12648#0      TGCTGCCCCTG-------AGCACCAGCTCCTCCAGC-CCCAGCT----CGCT--CCACTG 1407
consensus_12648#1      TGCGGATCCGGCCACTTCAAGGACGACGACGGCAACCTCGAGCGGGTTCGCTGGCAATTC 535
                       *** *  ** *       *    *     *  ** *  * **      ****  * * * 

consensus_12648#4      CAACGCTTCCAGCGAGG-GCCGCCGGCTGGGGTGCCACCACCGGGGGAAGCCGTGCACGT 514
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      CACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGT 548
consensus_12648#3      CACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGT 434
consensus_12648#0      CACCGCTTCCAGCGAGGCGCCGCCGGCGGCGGCGCCACCACCGGGCGACGCCGTGCACGT 1467
consensus_12648#1      GATCAATCCTTGGGTTCAGCAGCTGCTGTTCTTCTCGCGATGAGGCGATGGGTGATGCTG 595
                                                                                   

consensus_12648#4      CTCGATGGTAGTCTTTCCGGGGCAGGGAATCGTCCCCGCCG------------------- 555
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      CTCGATGGTAGTCTTTCCGGC-CAGGGAATCGTCCCCGCCGGCGGCGTCGAC----GACG 603
consensus_12648#3      CTCGATGGTAGTCTTTCCGGC-CAGGGAATCGTCCCCGCCGGCGGCGTCGAC----GACG 489
consensus_12648#0      CTCGATGGTAGTCTTTCCGGC-CAGGGAATCGTCCCCGCCGGCGGCGTCGAC----GACG 1522
consensus_12648#1      GGATTGAAACGTTTTTTTGTTCTGCAATATCGTTGGCAAAATTAATTTTGATTTGTGATG 655
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCCTTGTCGACG 663
consensus_12648#3      ACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCCTTGTCGACG 549
consensus_12648#0      ACGACCGAGAGCCTCGACACCTTGTCCTTCTTGCCGAGCGCCTCGCTCGCCTTGTCGACG 1582
consensus_12648#1      TTGAANATGCACTGTGAGGCCAGCATATTTGAATCGATAAATGAATTTTTGATTGGGGTT 715
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      CAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCG----------- 712
consensus_12648#3      CAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCGCTGCCGCTGCA 609
consensus_12648#0      CAGGCCGCCGCGAGCGCGCGGTGATCACCGTGCCCGCCGTCCGCCGCCGCTGCCGCTGCA 1642
consensus_12648#1      TGTNNNNNAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNN 775
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      GTACCGGCCCTGAAGAGCACGGTCTCGGCGTCGCCGTCGCCGTCGCCGGCGAAGGAGTCG 669
consensus_12648#0      GTA--------------------------------------------------------- 1645
consensus_12648#1      NNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGGGGGGGGGCCGCGGCCCCAAATCCCCCTA 835
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ATCGGGACGGACCTGACGCGCTTGCGGGTGGTCTCCG----------------------- 706
consensus_12648#0      ------------------------------------------------------------
consensus_12648#1      AAGGGAGCGTATTACCCCCCCCCTGCGCCGGTTTATAAACGTTGGGAGTGGAAAACCTGG 895
                                                                                   

consensus_12648#4      ------------------------------------------------------------
consensus_12648#5      ------------------------------------------------------------
consensus_12648#2      ------------------------------------------------------------
consensus_12648#3      ------------------------------------------------------------
consensus_12648#0      ------------------------------------------------------------
consensus_12648#1      GGTTACCCAAATTAATATGTTTGAGGCAATCCCCTTTTGCCAGTGTGGGTAAACAAAAAG 955
                                                                                   

consensus_12648#4      -----------
consensus_12648#5      -----------
consensus_12648#2      -----------
consensus_12648#3      -----------
consensus_12648#0      -----------
consensus_12648#1      AGCCCCCCCCG 966