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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12682#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3035 fasta sequence
[TCTCGCCCTCTCCTCCCCCTCCCCCTCCCCCTCCAGTCCCCTCGCGAAACCCTAACTGTCTCCCCCTCCTCCTCCTCCTCCTCCTCGGGGTAGATCTTCGCGCGGGCTCTCCCGCTGGGGCGGCACCGCGCGCGCCCCGCCGTGATGGCGTCGGACGGCGCGCAGATGGAGGTGGAGCGGCGGCTTCGCGACATCGGCGCCCGCTTCACCTCGCTCCCGGACGCCGACGACGAGCTGCTCAGATTAATCGAGGAGGCAGAAACCTGGTTGGCCAGGGTTGACCAGTCGCCGCCGGAGAGCATGCACAAGGCTCTCCGGCCAACAATGAGTGCTCTGATTAAGAAGGAGTTACTGGATCACAGTGTCCCTGACATAAAGCTTGCTGTTGCCTCCTGTTTAACGGAGGTTACCAGGATCACTGCCCCGGAGGCCCCCTATGACGATGATGTCATGAAGGATGTATTTACCAGAGTTGTTGAGGCCTTTGAGAAGTTGGATGATATGGAAAGCCCCTCCTATGCAAGGAGGGTTGCGATGCTTGAAACCGTTGCGAAGGTCCGGAGCTGTGTCTTGATGCTAGATCTTGACTGCGACGATCTGATACGGGACATGTTTCACCACTTCTTCAGAACCATATCCAATACTCATCAAGAGAATGTCATCACCTCGATGGAAACTGTGATGAAGTTTGTAATTGATGAGAGCGAAGATGTCCAGCAAGATATGCCATCCTGCCTGCTTCAAGATCTAGCATCTTACCTTCTGAAGAACCTTAAAAAGGAAGAAAAAGAAACTCTTCCAGCATCTTTCGAACTTGCAGAGAAGGTAATTAATAAGTGTTATGAGAAGTTAAAGCCAGTGTTTACTCCTTTACTTCGGGGCACTCCCTTGGATGAGTACAGCGAAGTTGTTACATCATTGTTCGAAGATGCTTTAGATGCTGGAGTAGCCGACAATTCTGATGCCCCTGGAAAGGATATGGTGGCTGATGGGAAATTATCTCATAAGATTGTTTCAGATGAGTCAGCTCAGGAATCATCAAAATTAGAGCAAGATGCCAATTGCCCTGGAAAAGACGGTACTCCTCCAAACAATACTTCCACTTCGGCGGTTAGCAATGGTTGTGCTTTAATAGACAGGGTCAAGTCTCCAAGTGGACCATCCTCTTCTGATAAGAAGGCTGAACTGCCTTCTGATGACAATCAGGCAAAAGACACTGATGATTTGATATCCGGTGCTAAAGAAATACCAGAACCAATCACCACAGAGCCTGAAAAGCCATCTGATCACAATTTAAAGAAAAGCCATAAACTTGATACTTCCACTGATTCTGAAGTGGTTGATCATTCTAAGGCTGTTAACAACAACGAGGATATTTTAGTCTCTAGGGAGTTATCCCCAGAGACTGATGATGGGGATAATAAGCTGCCACCAGAGACTGGGAATAGAGCTGCTGATGACAAATCGAAACATGTTGATAACACACCTGCTGGCAAGGGAAAGCGGGGCCGGCCTCCTGCATCAAAGTCGCATGAGAAGAAGAATGTTGGAAAAGGCAAAGTATCAGGTTTAGAGTCTAAAAAAGCTGACGCAGTTAGTGATTCTGGTGGAAGGGCTACAAGGCGACTAGCTAAAGATGATGATATCAAGTCTTCATTCAAAAAGACTGGTGAAGGGGAATCTTCGAAGAAGAAGCAGAAGGAAAATTTGAAACAGCAGGAAGATACTCCACCCGATGAAGACACTGATGAGGATCTCAGTTTAAAGGATATCGTATCTCCCAAGTCTTCGGCCAAAACAGGTAAAAACAAAGGCCAGGCAGGTGACAGTGGGGGCTCAAAAAGGAAACGTGCACAGGAAGCTGAAGAGACTCCCCAGCCCAAGAAGAACAAAATTCTTAAAGGAAATCTTGTTGGCTCAAGAATCAAAGTGTGGTGGCCTGATGACAGAAAGTTCTATAAAGGTGTTGTTGAGTCATTTGATGTTGCTTCAAAAAAGCACAAGGTTGTTTATGATGATGGAGATGTTGAACGCCTACACCTTAAGAATGAAAAATGGGAATTCATTGATGAGGGGCGAGACAACAATCCTGACGCATCGTCTGATATGCCGCACGGCAGAAGGGGTAGAGTTAGCTTGGGTGAGCAAACAAAGGAAGGAAAAATAGAAACACCCAGCAGTGGGAAACATCGTGGCACTGATGTCGCTGATCCTCCCAAGAAAAGAGGACGCCCTAAAGGTGTGCGCTCCAGCAATAGTTCACAAAATGATGACAGTCCTTTGAAGGGGAAAAGTGCAGAAAACGATGATGAAGATATATCCAAGACACCTAAAAGTGGCAGTGCCCTCAAGAATGAAGGTGGAAGATCATCTCGATCCACTGGCAAGACAAAGGATGGCCTGCTAAAGGGAAGCAACAAGGATGAGACTGGTAACACTAAAAGCGCAAGCAAATCAAAAAATGATGGTGGCAGCAAACACAAGGATTCAAAAGATGAAGCTAAATCCAGCGGATCAAATCCAAAAGGTGCAAGCACTCCCAAAGCTGCTGATGGATCCAAGACAAATGGTCTTTCGACCAAAAGAAAGCAAAAGGAGAAAGAAGGCGAGTCATCTGAAGAGGAAGAGCATGTGTCTGCTAAAATTTCTACTGGAAAGAAG-CGCAGAAGGAAGGCTCATAACTAATTTGCTCTGGCCTTGTGCAGTTCTTCCAAGGGGTACTTATGAGGCATGCAGTCTGAAGGTTTTTGGCATGAGCAG-CCTAGCAATTTATATGGCTTCCATCCCTTGGCTGGTTGCCTGCCAAGTCTTGCCCTAATCGACCGTCACGAAACAGCTGGTAGTTGTAGCAGTTGCAGTGGTAGTTGTAATGTAGGTGTTACTTTTGTTCCTTGTGGTCAGCTGTGAGCCTCTAGCAAATATGGTTTCTTGCTTGCTGTCGTTCAACCCTTATTAGATTGTATTTTCTGCTGGAGCTATTTGAGACGTCAATTTTGCAGCAAGCATGAATGGAGAGAAATGTCGTAGTTCAAAAA]
[+] EMBL AK068612 [TCTCGCCCTCTCCTCCCCCTCCCCCTCCCCCTCCAGTCCCCTCGCGAAACCCTAACTGTCTCCCCCTCCTCCTCCTCCTCCTCCTCGGGGTAGATCTTCGCGCGGGCTCTCCCGCTGGGGCGGCACCGCGCGCGCCCCGCCGTGATGGCGTCGGACGGCGCGCAGATGGAGGTGGAGCGGCGGCTTCGCGACATCGGCGCCCGCTTCACCTCGCTCCCGGACGCCGACGACGAGCTGCTCAGATTAATCGAGGAGGCAGAAACCTGGTTGGCCAGGGTTGACCAGTCGCCGCCGGAGAGCATGCACAAGGCTCTCCGGCCAACAATGAGTGCTCTGATTAAGAAGGAGTTACTGGATCACAGTGTCCCTGACATAAAGCTTGCTGTTGCCTCCTGTTTAACGGAGGTTACCAGGATCACTGCCCCGGAGGCCCCCTATGACGATGATGTCATGAAGGATGTATTTACCAGAGTTGTTGAGGCCTTTGAGAAGTTGGATGATATGGAAAGCCCCTCCTATGCAAGGAGGGTTGCGATGCTTGAAACCGTTGCGAAGGTCCGGAGCTGTGTCTTGATGCTAGATCTTGACTGCGACGATCTGATACGGGACATGTTTCACCACTTCTTCAGAACCATATCCAATACTCATCAAGAGAATGTCATCACCTCGATGGAAACTGTGATGAAGTTTGTAATTGATGAGAGCGAAGATGTCCAGCAAGATATGCCATCCTGCCTGCTTCAAGATCTAGCATCTTACCTTCTGAAGAACCTTAAAAAGGAAGAAAAAGAAACTCTTCCAGCATCTTTCGAACTTGCAGAGAAGGTAATTAATAAGTGTTATGAGAAGTTAAAGCCAGTGTTTACTCCTTTACTTCGGGGCACTCCCTTGGATGAGTACAGCGAAGTTGTTACATCATTGTTCGAAGATGCTTTAGATGCTGGAGTAGCCGACAATTCTGATGCCCCTGGAAAGGATATGGTGGCTGATGGGAAATTATCTCATAAGATTGTTTCAGATGAGTCAGCTCAGGAATCATCAAAATTAGAGCAAGATGCCAATTGCCCTGGAAAAGACGGTACTCCTCCAAACAATACTTCCACTTCGGCGGTTAGCAATGGTTGTGCTTTAATAGACAGGGTCAAGTCTCCAAGTGGACCATCCTCTTCTGATAAGAAGGCTGAACTGCCTTCTGATGACAATCAGGCAAAAGACACTGATGATTTGATATCCGGTGCTAAAGAAATACCAGAACCAATCACCACAGAGCCTGAAAAGCCATCTGATCACAATTTAAAGAAAAGCCATAAACTTGATACTTCCACTGATTCTGAAGTGGTTGATCATTCTAAGGCTGTTAACAACAACGAGGATATTTTAGTCTCTAGGGAGTTATCCCCAGAGACTGATGATGGGGATAATAAGCTGCCACCAGAGACTGGGAATAGAGCTGCTGATGACAAATCGAAACATGTTGATAACACACCTGCTGGCAAGGGAAAGCGGGGCCGGCCTCCTGCATCAAAGTCGCATGAGAAGAAGAATGTTGGAAAAGGCAAAGTATCAGGTTTAGAGTCTAAAAAAGCTGACGCAGTTAGTGATTCTGGTGGAAGGGCTACAAGGCGACTAGCTAAAGATGATGATATCAAGTCTTCATTCAAAAAGACTGGTGAAGGGGAATCTTCGAAGAAGAAGCAGAAGGAAAATTTGAAACAGCAGGAAGATACTCCACCCGATGAAGACACTGATGAGGATCTCAGTTTAAAGGATATCGTATCTCCCAAGTCTTCGGCCAAAACAGGTAAAAACAAAGGCCAGGCAGGTGACAGTGGGGGCTCAAAAAGGAAACGTGCACAGGAAGCTGAAGAGACTCCCCAGCCCAAGAAGAACAAAATTCTTAAAGGAAATCTTGTTGGCTCAAGAATCAAAGTGTGGTGGCCTGATGACAGAAAGTTCTATAAAGGTGTTGTTGAGTCATTTGATGTTGCTTCAAAAAAGCACAAGGTTGTTTATGATGATGGAGATGTTGAACGCCTACACCTTAAGAATGAAAAATGGGAATTCATTGATGAGGGGCGAGACAACAATCCTGACGCATCGTCTGATATGCCGCACGGCAGAAGGGGTAGAGTTAGCTTGGGTGAGCAAACAAAGGAAGGAAAAATAGAAACACCCAGCAGTGGGAAACATCGTGGCACTGATGTCGCTGATCCTCCCAAGAAAAGAGGACGCCCTAAAGGTGTGCGCTCCAGCAATAGTTCACAAAATGATGACAGTCCTTTGAAGGGGAAAAGTGCAGAAAACGATGATGAAGATATATCCAAGACACCTAAAAGTGGCAGTGCCCTCAAGAATGAAGGTGGAAGATCATCTCGATCCACTGGCAAGACAAAGGATGGCCTGCTAAAGGGAAGCAACAAGGATGAGACTGGTAACACTAAAAGCGCAAGCAAATCAAAAAATGATGGTGGCAGCAAACACAAGGATTCAAAAGATGAAGCTAAATCCAGCGGATCAAATCCAAAAGGTGCAAGCACTCCCAAAGCTGCTGATGGATCCAAGACAAATGGTCTTTCGACCAAAAGAAAGCAAAAGGAGAAAGAAGGCGAGTCATCTGAAGAGGAAGAGCATGTGTCTGCTAAAATTTCTACTGGAAAGAAG CGCAGAAGGAAGGCTCATAACTAATTTGCTCTGGCCTTGTGCAGTTCTTCCAAGGGGTACTTATGAGGCATGCAGTCTGAAGGTTTTTGGCATGAGCAG CCTAGCAATTTATATGGCTTCCATCCCTTGGCTGGTTGCCTGCCAAGTCTTGCCCTAATCGACCGTCACGAAACAGCTGGTAGTTGTAGCAGTTGCAGTGGTAGTTGTAATGTAGGTGTTACTTTTGTTCCTTGTGGTCAGCTGTGAGCCTCTAGC AATATGGTTTCTTGCTTGCTGTCGTTCAACCCTTATTAGATTGTATTTTCTGCTGGAGCTATTTGAGACGTCAATTTTGCAGCAAGCATGAATGGAGAGAAAT ]
[+] EMBL CB634774 [ GTGATGAAGTTTGTAATTGATGAGAGCGAAGATGTCCAGCAAGATATGCCATCCTGCCTGCTTCAAGATCTAGCATCTTACCTTCTGAAGAACCTTAAAAAGGAAGAAAAAGAAACTCTTCCAGCATCTTTTGAACTTGCAGAGAAGGTAATTAATAAGTGTTATGAGAAGTTAAAGCCAGTGTTTACTCCTTTACTTCGGGGCACTCCCTTGGATGAGTACAGCGAAGTTGTTACATCATTGTTCGAAGATGCTTTAGATGCTGGAGTAGCCGACAATTCTGATGCCCCTGGAAAGGATACGGTGGCTGATGGGAAATTATCTCATAAGATTGTTTCAGATGAGTCAGCTCAGGAATCTTCAAAATTAGAGCAAGATGCCAATTGTCCTGGAAAAGACGGTACTCCTCCAAACAATACTTCCACTTCGGCGGTTAGCAATGGTTGTGCTTTAATAGACAGGGTCAAGTCTCCAAGTGGACCATCCTCTTCTGATAAGAAGGCTGAACTGCCTTCTGATGACAATCAGGCAAAAGACACTGATGATTTGATATCCGGTGCTAAAGAAATACCAGAACCAATCACCACAGAGCCTGAAAAGCCATCTGATCACAATTTAAAGAAAAGCCATAAACTTGATACTTCCACTGATTCTGAAGTGGTTGATCATTCTAAGGCTGTTAACAACGACGAGGATATTTTAGTCTCTAGGGAG ]
[+] EMBL CB640442 [ CATCCTGCCTGCTTCAAGATCTAGCATCTTACCTTCTGAAGAACCTTAAAAAGGAAGAAAAAGAAACTCTTCCAGCATCTTTCGAACTTGCAGAGAAGGTAATTAATAAGTGTTATGAGAAGTTAAAGCCAGTGTTTACTCCTTTACTTCGGGGCACTCCCTTGGATGAGTACAGCGAAGTTGTTACATCATTGTTCGAAGATGCTTTAGATGCTGGAGTAGCCGACAATTCTGATGCCCCTGGAAAGGATATGGTGGCTGATGGGAAATTATCTCATAAGATTGTTTCAGATGAGTCAGCTCAGGAATCATCAAAATTAGAGCAAGATGCCAATTGCCCTGGAAAAGACGGTACTCCTCCAAACAATACTTCCACTTCGGCGGTTAGCAATGGTTGTGCTTTAATAGACAGGGTCAAGTCTCCAAGTGGACCATCCTCTTCTGATAAGAAGGCTGAACTGCCTTCTGATGACAATCAGGCAAAAGACACTGATGATTTGATATCCGGTGCTAAAGAAATACCAGAACCAATCACCACAGAGCCTGAAAAGCCATCTGATCACAATTTAAAGAAAAGCCATAAACTTGATACTTCC ]
[+] EMBL CB675537 [ TCTGAAGAACCTTAAAAAGGAAGAAAAAGAAACTCTTCCAGCATCTTTCGAACTTGCAGAGAAGGTAATTAATAAGTGTTATGAGAAGTTAAAGCCAGTGTTTACTCCTTTACTTCGGGGCACTCCCTTGGATGAGTACAGCGAAGTTGTTACATCATTGTTCGAAGATGCTTTAGATGCTGGAGTAGCCGACAATTCTGATGCCCCTGGAAAGGATATGGTGGCTGATGGGAAATTATCTCATAAGATTGTTTCAGATGAGTCAGCTCAGGAATCATCAAAATTAGAGCAAGATGCCAATTGCCCTGGAAAAGACGGTACTCCTCCAAACAATACTTCCACTTCGGCGGTTAGCAATGGTTGTGCTTTAATAGACAGGGTCAAGTCTCCAAGTGGACCATCCTCTTCTGATAAGAAGGCTGAACTGCCTTCTGATGACAATCAGGCAAAAGACACTGATGATTTGATATCCGGTGCTAAAGAAATACCAGAACCAATCACCACAGAGCCTGAAAAGCCATCTGATCACAATTTAAAGAAAAGCCATAAACTTGATACTTCCACTGATTCTGAAGTGGTTGATCATTCTAAGGCTGTTAACAACAACGAGGATATTTTAGTCTCTAGGGAGTTATCCCCAGAGACTGATGATGGGGATAATAAGCTGCCACCAGAGACTGGGAATAGAGCTGCTGATGACAAATCGAAACATGTTGATAACACACCTGCTGGCAAGGGAAAGCGGGGCCG ]
[+] EMBL AK068884 [ CCAGCATCTTTCGAACTTGCAGAGAAGGTAATTAATAAGTGTTATGAGAAGTTAAAGCCAGTGTTTACTCCTTTACTTCGGGGCACTCCCTTGGATGAGTACAGCGAAGTTGTTACATCATTGTTCGAAGATGCTTTAGATGCTGGAGTAGCCGACAATTCTGATGCCCCTGGAAAGGATATGGTGGCTGATGGGAAATTATCTCATAAGATTGTTTCAGATGAGTCAGCTCAGGAATCATCAAAATTAGAGCAAGATGCCAATTGCCCTGGAAAAGACGGTACTCCTCCAAACAATACTTCCACTTCGGCGGTTAGCAATGGTTGTGCTTTAATAGACAGGGTCAAGTCTCCAAGTGGACCATCCTCTTCTGATAAGAAGGCTGAACTGCCTTCTGATGACAATCAGGCAAAAGACACTGATGATTTGATATCCGGTGCTAAAGAGATACCAGAACCAATCACCACAGAGCCTGAAAAGCCATCTGATCACAATTTAAAGAAAAGCCATAAACTTGATACTTCCACTGATTCTGAAGTGGTTGATCATTCTAAGGCTGTTAACAACAACGAGGATATTTTAGTCTCTAGGGAGTTATCCCCAGAGACTGATGATGGGGATAATAAGCTGCCACCAGAGACTGGGAATAGAGCTGCTGATGACAAATCGAAACATGTTGATAACACACCTGCTGGCAAGGGAAAGCGGGGCCGGCCTCCTGCATCAAAGTCGCATGAGAAGAAGAATGTTGGAAAAGGCAAAGTATCAGGTTTAGAGTCTAAAAAAGCTGACGCAGTTAGTGATTCTGGTGGAAGGGCTACAAGGCGACTAGCTAAAGATGATGATATCAAGTCTTCATTCAAAAAGACTGGTGAAGGGGAATCTTCGAAGAAGAAGCAGAAGGAAAATTTGAAACAGCAGGAAGATACTCCACCCGATGAAGACACTGATGAGGATCTCAGTTTAAAGGATATCGTATCTCCCAAGTCTTCGGCCAAAACAGGTAAAAACAAAGGCCAGGCAGGTGACAGTGGGGGCTCAAAAAGGAAACGTGCACAGGAAGCTGAAGAGACTCCCCAGCCCAAGAAGAACAAAATTCTTAAAGGAAATCTTGTTGGCTCAAGAATCAAAGTGTGGTGGCCTGATGACAGAAAGTTCTATAAAGGTGTTGTTGAGTCATTTGATGTTGCTTCAAAAAAGCACAAGGTTGTTTATGATGATGGAGATGTTGAACGCCTACACCTTAAGAATGAAAAATGGGAATTCATTGATGAGGGGCGAGACAACAATCCTGACGCATCGTCTGATATGCCGCACGGCGGAAGGGGTAGAGTTAGCTTGGGTGAGCAAACAAAGGAAGGAAAAATAGAAACACCCAGCAGTGGGAAACATCGTGGCACTGATGTCGCTGATCCTCCCAAGAAAAGAGGACGCCCTAAAGGTGTGCGCTCCAGCAATAGTTCACAAAATGATGACAGTCCTTTGAAGGGGAAAAGTGCAGAAAACGATGATGAAGATATATCCAAGACACCTAAAAGTGGCAGTGCCCTCAAGAATGAAGGTGGAAGATCATCTCGATCCACTGGCAAGACAAAGGATGGCCTGCTAAAGGGAAGCAACAAGGATGAGACTGGTAACACTAAAAGCGCAAGCAAATCAAAAAATGATGGTGGCAGCAAACACAAGGATTCAAAAGATGAAGCTAAATCCAGCGGATCAAATCCAAAAGGTGCAAGCACTCCCAAAGCTGCTGATGGATCCAAGACAAATGGTCTTTCGACCAAAAGAAAGCAAAAGGAGAAAGAAGGCGAGTCATCTGAAGAGGAAGAGCATGTGTCTGCTAAAATTTCTACTGGAAAGAAG CGCAGAAGGAAGGCTCATAACTAATTTGCTCTGGCCTTGTGCAGTTCTTCCAAGGGGTACTTATGAGGCATGCAGTCTGAAGGTTTTTGGCATGAGCAG CCTAGCAATTTATATGGCTTCCATCCCTTGGCTGGTTGCCTGCCAAGTCTTGCCCTAATCGACCGTCACGAAACAGCTGGTAGTTGTAGCAGTTGCAGTGGTAGTTGTAATGTAGGTGTTACTTTTGTTCCTTGTGGTCAGCTGTGAGCCTCTAGCAAATATGGTTTCTTGCTTGCTGTCGTTCAACCCTTATTAGATTGTATTTTCTGCTGGAGCTATTTGAGACGTCAATTTTGCAGCAAGCATGAATGGAGAGAAATGTCGTAGTT ]
[+] EMBL OSR22261A [ AAGAAAAGCCATAAACTTGATACTTCCACTGATTCTGAAGTGGTTGATCATTCTAAGGCTGTTAACAACAACGAGGATATTTTAGTCTCTAGGGAGTTATCCCCAGAGACTGATGATGGGGATAATAAGCTGCCACCAGAGACTGGGAATAGAGCTGCTGATGACAAATCGAAACATGTTGATAACACACCTGCTGGCAAGGGAAAGCGGGGCCGGCCTCCTGCATCAAAGTCGCATGAGAAGAAGAATGTTGGAAAAGGCAAAGTATCAGGTTTAGAGTCTAAAAANGCTGACGCAGTTAGTGATTCTGGTGGAAGGGCTACAAGGCGACTAGCTAAAGATGATGATATCAAGTCTT ]
[-] EMBL CB675538 [ GAAAAGAGGACGCCCTAAAGGTGTGCGCTCCAGCAATAGTTCACAAAATGATGACAGTCCTTTGAAGGGGAAAAGTGCAGAAAACGATGATGAAGATATATCCAAGACACCTAAAAGTGGCAGTGCCCTCAAGAATGAAGGTGGAAGATCATCTCGATCCACTGGCAAGACAAAGGATGGCCTGCTAAAGGGAAGCAACAAGGATGAGACTGGTAACACTAAAAGCGCAAGCAAATCAAAAAATGATGGTGGCAGCAAACACAAGGATTCAAAAGATGAAGCTAAATCCAGCGGATCAAATCCAAAAGGTGCAAGCACTCCCAAAGCTGCTGATGGATCCAAGACAAATGGTCTTTCGACCAAAAGAAAGCAAAAGGAGAAAGAAGGCGAGTCATCTGAAGAGGAAGAGCATGTGTCTGCTAAAATTTCTACTGGAAAGAAG CGCAGAAGGAAGGCTCATAACTAATTTGCTCTGGCCTTGTGCAGTTCTTCCAAGGGGTACTTATGAGGCATGCAGTCTGAAGGTTTTTGGCATGAGCAG CCTAGCAATTTATATGGCTTCCATCCCTTGGCTGGTTGCCTGCCAAGTCTTGCCCTAATCGACCGTCACGAAACAGCTGGTAGTTGTAGCAGTTGCAGTGGTAGTTGTAATGTAGGTGTTACTTTTGTTCCTTGTGGTCAGCTGTGAGCCTCTAGCAAATATGGTTTCTTGCTTGCTGTCGTTCAACCCTTATTAGATTGTATTTTCTGCTGGAGCTATTTGAGACGTCAATTTTGCA ]
[-] EMBL CB634775 [ AAGTGCAGAAAACGATGATGAAGATATATCCAAGACACCTAAAAGTGGCAGTGCCCTCAAGAATGAAGGTGGAAGATCATCTCGATCCACTGGCAAGACAAAGGATGGCCTGCTAAAGGGAAGCAACAAGGATGAGACTGGTAACACTAAAAGCGCAAGCAAATCAAAAAATGATGGTGGCAGCAAACACAAGGATTCAAAAGATGAAGCTAAATCCAGCGGATCAAATCCAAAAGGTGCAAGCACTCCCAAAGCTGCTGATGGATCCAAGACAAATGGTCTTTCGACCAAAAGAAAGCAAAAGGAGAAAGAAGGCGAGTCATCTGAAGAGGAAGAGCATGTGTCTGCTAAAATTTCTACTGGAAAGAAG CGCAGAAGGAAGGCTCATAACTAATTTGCTCTGGCCTTGTGCAGTTCTTCCAAGGGGTACTTATGAGACATGCAGTCTGAAGGTTTTTGGCATGAGCAG CCTAGCAATTTATATGGCTTCCATCCCTTGGCTGGTTGCCTGCCAAGTCTTGCCCTAATCGACCGTCACGAAACAGCTGGTAGTTGTAGCAGTTGCAGTGGTAGTTGTAATGTAGGTGTTACTTTTGTTCCTTGTGGTCAGCTGTGAGCCTCTAGCAAATATGGTTTCATGCTTGCTGTCGTTCAACCCTTATTAGATTGTATTTTCTGCTGGAGCTATTTGAGACGTCAATTTTGCAGCAAGCATGAATGGAGAGAAATGTCGTA ]
[+] EMBL AU031859 [ GAAAGAAGGCGANTCATCTGAAGAGGAAGAGCATGTGTCTGCTAAAATTTCTACTGGAAAGAAGCCGCAGAAGGAAGGCTCATAACTAATTTGCTCTGGCCTTGTGCAGTTCTTCCAAGGGGTACTTATGAGGCATGCAGTCTGAAGGTTTTTGGCATGAGCAGCCCTAGCAATTTATATGGCTTCCATCCCTTGGCTGGTTGCCTGCCAAGTCTTGCCCTAATCGACCGTCACGAAACAGCTGGTAGTTGTAGCAGTTGCAGTGGTAGTTGTAATGTAGGTGTTACTTTTGTTCCTTGTGGTCAGCTGTGAGCCTCTAGCAAATATGGTTTCTTGCTTGCTGTCGTTCAACCCTTATTAGATTGTATTTTCTGCTGGAGCTATTTGAGACGTCAATTTTGCAGCAAGCATGAATGGAGAGAAATGTCGTAGTTCAAAAA]
consensusID : consensus_12682#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 839 fasta sequence
[AAACCCTAACTGTCTCCCCCTCCTCCTCCTCCTCCTCCTCGGGGTAGATCTTCGCGCGGGCTCTCCCGCTGGGGCGGCACCGCGCGCGCCCCGCCGTGATGGCGTCGGACGGCGCGCAGATGGAGGTGGAGCGGCGGCTTCGCGACATCGGCGCCCGCTTCACCTCGCTCCCGGACGCCGACGACGAGCTGCTCAGATTAATCGAGGAGGCAGAAACCTGGTTGGCCAGGGTTGACCAGTCGCCGCCGGAGAGCATGCACAAGGCTCTCCGGCCAACAATGAGTGCTCTGATTAAGAAGGAGTTACTGGATCACAGTGTCCCTGACATAAAGCTTGCTGTTGCCTCCTGTTTAACGGAGGTTACCAGGATCACTGCCCCGGAGGCCCCCTATGACGATGATGTCATGAAGGATGTATTTACCAGAGTTGTTGAGGCCTTTGAGAAGTTGGATGATATGGAAAGCCCCTCCTATGCAAGGAGGGTTGCGATGCTTTGAAACCGTGCGAAGGCCCGGAGCTGGTCTTGATGCTAGATCTGCTGCGAGATCTGATCNGGACATGTTACCACTCTCAGACCATATCATACTATCAGAGATGCATACTCATGGACTGGAGAGTTGTATGTGANACAGATGCACAGATTGCATCTGCTGTAGACACATTACTCGAGACTAAAGGAGAAGACTTCGGTTTTGACTGAAAGGTTATGGTTGAATACCAGTCCTATTGGCACTGCATCGGAAACAATTTTCTTGAATTTGGGGCCCCCTCCGGGGGGGAGGTTATTTAATTGGTGATATAATGGCGCTTAAGAGTATAACAAAGCTTGGGGGAAGCGC]
[+] EMBL AW155198 [AAACCCTAACTGTCTCCCCCTCCTCCTCCTCCTCCTCCTCGGGGTAGATCTTCGCGCGGGCTCTCCCGCTGGGGCGGCACCGCGCGCGCCCCGCCGTGATGGCGTCGGACGGCGCGCAGATGGAGGTGGAGCGGCGGCTTCGCGACATCGGCGCCCGCTTCACCTCGCTCCCGGACGCCGACGACGAGCTGCTCAGATTAATCGAGGAGGCAGAAACCTGGTTGGCCAGGGTTGACCAGTCGCCGCCGGAGAGCATGCACAAGGCTCTCCGGCCAACAATGAGTGCTCTGATTAAGAAGGAGTTACTGGATCACAGTGTCCCTGACATAAAGCTTGCTGTTGCCTCCTGTTTAACGGAGGTTACCAGGATCACTGCCCCGGAGGCCCCCTATGACGATGATGTCATGAAGGATGTATTTACCAGAGTTGTTGAGGCCTTTGAGAAGTTGGATGATATGGAAAGCCCCTCCTATGCAAGGAGGGTTGCGATGCTTTGAAACCGTGCGAAGGCCCGGAGCTGGTCTTGATGCTAGATCTGCTGCGAGATCTGATCNGGACATGTTACCACTCTCAGACCATATCATACTATCAGAGATGCATACTCATGGACTGGAGAGTTGTATGTGANACAGATGCACAGATTGCATCTGCTGTAGACACATTACTCGAGACTAAAGGAGAAGACTTCGGTTTTGACTGAAAGGTTATGGTTGAATACCAGTCCTATTGGCACTGCATCGGAAACAATTTTCTTGAATTTGGGGCCCCCTCCGGGGGGGAGGTTATTTAATTGGTGATATAATGGCGCTTAAGAGTATAACAAAGCTTGGGGGAAGCGC]
consensusID : consensus_12682#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 153 fasta sequence
[TTGCATGTAGGCTGGATCAATATGGCACATCCATATGAAAAGAACCTGCTGGGTGTTTCTATTTTTCCTTCCTTTGTTTGCTCACCCAAGCTAACTCTACCCCTTCTGCCGCGCGGCCTGGTAAAAATGATCAAAGAACTCAAATATATAAAA]
[+] EMBL BI803414 [TTGCATGTAGGCTGGATCAATATGGCACATCCATATGAAAAGAACCTGCTGGGTGTTTCTATTTTTCCTTCCTTTGTTTGCTCACCCAAGCTAACTCTACCCCTTCTGCCGCGCGGCCTGGTAAAAATGATCAAAGAACTCAAATATATAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12682#0 TCTCGCCCTCTCCTCCCCCTCCCCCTCCCCCTCCAGTCCCCTCGCGAAACCCTAACTGTC 60
consensus_12682#1 ----------------------------------------------AAACCCTAACTGTC 14
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TCCCCCTCCTCCTCCTCCTCCTCCTCGGGGTAGATCTTCGCGCGGGCTCTCCCGCTGGGG 120
consensus_12682#1 TCCCCCTCCTCCTCCTCCTCCTCCTCGGGGTAGATCTTCGCGCGGGCTCTCCCGCTGGGG 74
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 CGGCACCGCGCGCGCCCCGCCGTGATGGCGTCGGACGGCGCGCAGATGGAGGTGGAGCGG 180
consensus_12682#1 CGGCACCGCGCGCGCCCCGCCGTGATGGCGTCGGACGGCGCGCAGATGGAGGTGGAGCGG 134
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 CGGCTTCGCGACATCGGCGCCCGCTTCACCTCGCTCCCGGACGCCGACGACGAGCTGCTC 240
consensus_12682#1 CGGCTTCGCGACATCGGCGCCCGCTTCACCTCGCTCCCGGACGCCGACGACGAGCTGCTC 194
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 AGATTAATCGAGGAGGCAGAAACCTGGTTGGCCAGGGTTGACCAGTCGCCGCCGGAGAGC 300
consensus_12682#1 AGATTAATCGAGGAGGCAGAAACCTGGTTGGCCAGGGTTGACCAGTCGCCGCCGGAGAGC 254
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 ATGCACA-AGGCTCTCCGGCCAACAATGAGTGCTCTGATTAAGAAGGAGTTACTGGATCA 359
consensus_12682#1 ATGCACA-AGGCTCTCCGGCCAACAATGAGTGCTCTGATTAAGAAGGAGTTACTGGATCA 313
consensus_12682#2 TTGCATGTAGGCTG---GATCAATATGGCACATCCATAT-GAAAAGAACCTGCTGG---- 52
**** ***** * *** * * * ** * *** * * ****
consensus_12682#0 CAGTGTCCCTGACATAAAGCTTGCTGTTGCCTCCTGTTTAACGGAGGTTACCAGGATCAC 419
consensus_12682#1 CAGTGTCCCTGACATAAAGCTTGCTGTTGCCTCCTGTTTAACGGAGGTTACCAGGATCAC 373
consensus_12682#2 --GTGTTTCT-------ATTTTTCCTTCCTTTGTTTGCTCACCCAAGCTAACTCTACCCC 103
**** ** * ** * * * * * ** * * ** * * * *
consensus_12682#0 TGCCCCGGAGGCCCCCTATGACGATGATGTCATGAAGGATGTATTTACCAGAGTTGTTGA 479
consensus_12682#1 TGCCCCGGAGGCCCCCTATGACGATGATGTCATGAAGGATGTATTTACCAGAGTTGTTGA 433
consensus_12682#2 TTCTGCCGCGCGGCCTGGTAAAAATGAT--CAAAGAACTCAAATATATAAAA-------- 153
* * * * * ** * * ***** ** * ** ** * *
consensus_12682#0 GGCCTTTGAGAAGTTGGATGATATGGAAAGCCCCTCCTATGCAAGGAGGGTTGCGATGCT 539
consensus_12682#1 GGCCTTTGAGAAGTTGGATGATATGGAAAGCCCCTCCTATGCAAGGAGGGTTGCGATGCT 493
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TGAAACCGTTGCGAAGGTCCGGAGCTGTGTCTTGATGCTAGATCTTGACTGCGACGATCT 599
consensus_12682#1 TTGAAACCGTGCGAAGGCCCGGAGCTG-GTCTTGATGCTAGATCT--GCTGCGA-GATCT 549
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 GATACGGGACATGTTTCACCACTTCTTCAGAACCATATCCAATACTCATCAAGAGAATGT 659
consensus_12682#1 GAT-CNGGACATGTT--ACCACT--CTCAGA-CCATATC--ATACT-ATCAGAGATGCAT 600
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 CATCACCTCGATGGAAACTGTGATGAAGTTTGTAATTGATGAGAGCGAAGATGTCCAGCA 719
consensus_12682#1 ACTCAT--------GGACTG----GAGAGTTGTATGTGA------NACAGATGCACAG-- 640
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 AGATATGCCATCCTGCCTGCTTCAAGATCTAGCATCTTACCTTCTGAAGAACCTTAAAAA 779
consensus_12682#1 ---------ATTGCATCTGCTGTAGA------CACATTAC-------------TCGAGAC 672
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 GGAAGAAAAAGAAACTCTTCCAGCATCTTTCGAACTTGCAGAGAAGGTAATTAATAAGTG 839
consensus_12682#1 TAAAGGAGAAGA-----CTTCGG----TTTTGACTGAAAGGTTATGGTTGAATACCAGTC 723
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TTATGAGAAGTTAAAGCCAGTGTTTACTCCTTTACTTCGGGGCACTCCCTTGGATG-AGT 898
consensus_12682#1 CTATTGGCA-CTGCATCGGAAACAATTTTCTTGAATTTGGGGCCCCCTCCGGGGGGGAGG 782
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 ACAGCGAAGTTGTTACATCAT--TGTTCGAAGATGCTTTAGATGCTGGAGTAGCCGACAA 956
consensus_12682#1 TTATTTAATTGGTGATATAATGGCGCTTAAGAGTATAACAAAGCTTGGGGGAAGCGC--- 839
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TTCTGATGCCCCTGGAAAGGATATGGTGGCTGATGGGAAATTATCTCATAAGATTGTTTC 1016
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 AGATGAGTCAGCTCAGGAATCATCAAAATTAGAGCAAGATGCCAATTGCCCTGGAAAAGA 1076
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 CGGTACTCCTCCAAACAATACTTCCACTTCGGCGGTTAGCAATGGTTGTGCTTTAATAGA 1136
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 CAGGGTCAAGTCTCCAAGTGGACCATCCTCTTCTGATAAGAAGGCTGAACTGCCTTCTGA 1196
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TGACAATCAGGCAAAAGACACTGATGATTTGATATCCGGTGCTAAAGAAATACCAGAACC 1256
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 AATCACCACAGAGCCTGAAAAGCCATCTGATCACAATTTAAAGAAAAGCCATAAACTTGA 1316
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TACTTCCACTGATTCTGAAGTGGTTGATCATTCTAAGGCTGTTAACAACAACGAGGATAT 1376
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TTTAGTCTCTAGGGAGTTATCCCCAGAGACTGATGATGGGGATAATAAGCTGCCACCAGA 1436
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 GACTGGGAATAGAGCTGCTGATGACAAATCGAAACATGTTGATAACACACCTGCTGGCAA 1496
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 GGGAAAGCGGGGCCGGCCTCCTGCATCAAAGTCGCATGAGAAGAAGAATGTTGGAAAAGG 1556
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 CAAAGTATCAGGTTTAGAGTCTAAAAAAGCTGACGCAGTTAGTGATTCTGGTGGAAGGGC 1616
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TACAAGGCGACTAGCTAAAGATGATGATATCAAGTCTTCATTCAAAAAGACTGGTGAAGG 1676
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 GGAATCTTCGAAGAAGAAGCAGAAGGAAAATTTGAAACAGCAGGAAGATACTCCACCCGA 1736
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TGAAGACACTGATGAGGATCTCAGTTTAAAGGATATCGTATCTCCCAAGTCTTCGGCCAA 1796
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 AACAGGTAAAAACAAAGGCCAGGCAGGTGACAGTGGGGGCTCAAAAAGGAAACGTGCACA 1856
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 GGAAGCTGAAGAGACTCCCCAGCCCAAGAAGAACAAAATTCTTAAAGGAAATCTTGTTGG 1916
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 CTCAAGAATCAAAGTGTGGTGGCCTGATGACAGAAAGTTCTATAAAGGTGTTGTTGAGTC 1976
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 ATTTGATGTTGCTTCAAAAAAGCACAAGGTTGTTTATGATGATGGAGATGTTGAACGCCT 2036
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 ACACCTTAAGAATGAAAAATGGGAATTCATTGATGAGGGGCGAGACAACAATCCTGACGC 2096
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 ATCGTCTGATATGCCGCACGGCAGAAGGGGTAGAGTTAGCTTGGGTGAGCAAACAAAGGA 2156
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 AGGAAAAATAGAAACACCCAGCAGTGGGAAACATCGTGGCACTGATGTCGCTGATCCTCC 2216
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 CAAGAAAAGAGGACGCCCTAAAGGTGTGCGCTCCAGCAATAGTTCACAAAATGATGACAG 2276
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TCCTTTGAAGGGGAAAAGTGCAGAAAACGATGATGAAGATATATCCAAGACACCTAAAAG 2336
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TGGCAGTGCCCTCAAGAATGAAGGTGGAAGATCATCTCGATCCACTGGCAAGACAAAGGA 2396
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TGGCCTGCTAAAGGGAAGCAACAAGGATGAGACTGGTAACACTAAAAGCGCAAGCAAATC 2456
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 AAAAAATGATGGTGGCAGCAAACACAAGGATTCAAAAGATGAAGCTAAATCCAGCGGATC 2516
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 AAATCCAAAAGGTGCAAGCACTCCCAAAGCTGCTGATGGATCCAAGACAAATGGTCTTTC 2576
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 GACCAAAAGAAAGCAAAAGGAGAAAGAAGGCGAGTCATCTGAAGAGGAAGAGCATGTGTC 2636
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TGCTAAAATTTCTACTGGAAAGAAGCGCAGAAGGAAGGCTCATAACTAATTTGCTCTGGC 2696
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 CTTGTGCAGTTCTTCCAAGGGGTACTTATGAGGCATGCAGTCTGAAGGTTTTTGGCATGA 2756
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 GCAGCCTAGCAATTTATATGGCTTCCATCCCTTGGCTGGTTGCCTGCCAAGTCTTGCCCT 2816
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 AATCGACCGTCACGAAACAGCTGGTAGTTGTAGCAGTTGCAGTGGTAGTTGTAATGTAGG 2876
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TGTTACTTTTGTTCCTTGTGGTCAGCTGTGAGCCTCTAGCAAATATGGTTTCTTGCTTGC 2936
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 TGTCGTTCAACCCTTATTAGATTGTATTTTCTGCTGGAGCTATTTGAGACGTCAATTTTG 2996
consensus_12682#1 ------------------------------------------------------------
consensus_12682#2 ------------------------------------------------------------
consensus_12682#0 CAGCAAGCATGAATGGAGAGAAATGTCGTAGTTCAAAAA 3035
consensus_12682#1 ---------------------------------------
consensus_12682#2 ---------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||