cluster # 12691

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Oryza sativa
cluster # 12691 cluster # 12691 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12691#0 length = 2142 sequences # 9

consensus_12691#1 length = 261 sequences # 2

consensusID : consensus_12691#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2142
fasta sequence

                              [CCTCACTCCCGATCAGATCCGAGCCCTAACCCTAGCCTCTCGCCGGCGGCGGCGGCGGCGGCGATGGCGTGCCTCGCGATCTCCCTCCAGCCGGTGAACGGCCCGGACATCCTCCTCCAGACCCGATCCTGGTTCCCCGTCTCCCGCGCCCTCGCCGCCGTCTCCTCCTTCCGCCTCGCCCGCCTCCACCTCGCCCGCGGGAAGCAGCAGCAGTTGTCATCGTCGTCGTCGGCCGCCGCGGCGGCGGCGACGCTCGAGGCCATCGGCGACGACCCGCTCGCCGCCGGGTCGGGGCAGCTCGTGGTCGGGGTGGAGTCGCAGTACCGCGTCGTGTACCGCCTAGTCAACTCCATCTACGTGCTCGGCGTCACCACCTCCTCCGACCACGCCTCCCCCGCCGTCCACGCCTTCGCCGTCGCCGACGCCGTCAACCAGGCCGTCTCCGTCGTCGTCGCCGCGTGCCGCGGCGTCGACGTCACGCCGGAGAAGGTGCACCGCAAGTACCCGGAGGTCTACCTCGCCCTCGACCTCGTCCTCCACGGCGTCGGCTCCGTCCGCCTCTCCCAGATCCTCGCCACCATCCATGGCGACAACCTCGCTCGCATGGTGAATTCATCCCCTGACGCCGAGGCGAAAGCTCGTGGCGCTGATCCCTGGCCCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACGGGCGCCTCGTTCGAGCTCCCCCAGGAGACCCTTGCTGCCGGTGA-CGAGTTCTCCGCGTCTAACATTGCGCCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGGAGAAGGACCCGTTTGCAGCCAGTGAACTGGTTAACAATTCTGAGGAGGCGTTGGTTGGTGGGTTCAAGAAGAACAAGGAGACCGCCATTGTGGTTGCTGATCCCGCGGCTGCGCTTGCTGGGTTGGAGGTCACGACCTTGCCACCAGCTGAGGCGACTAAGCCAACATTTATTGGAGTTGAAGGGTTTGAGGGTGACTATGGTGGAATTGAGTTTGGCAATGAGGAGGCTTCACTGGCCGAGGCATTTGAAGGGTTCAATGCGCCGTTTGGGGGTGGATTGGATGCTTCAGAGTTTGTTACCACAACAAAGAAGGACCATAAGGATAAGAGCATCACTGGTCTTGAGCTGCTAGCCACTAGTGCTGGACAGGGACCAAATGCACCTGGTGGTACCCCGCTGGAGAACTTGTTGGTGACAAAGAGCACAGAGATGACAGCCCCTGAGCTATACATCGTGGAGGAGGTCAATGCAGAATTTAAGGAGTCTATTCTTGCACGGGTTGGTTTGAAGGGAACAATCTTTCTGCGAACGTTGCCACCAAAGAAGGCGGCTGGTAAGGAGACAGAGTTCTCATTTCGTCTTGAGGGCACATCTGGAATGAAGAAGGCCGCGTTGCAGAGCACTGTGTTGAGCAACCTCGAGAATGGGATGTTCCATGTCCGGACGCCATCGAAGGAGGAACCCATCCCCATCATGAAGTACAGCTTTCTGCCCAAGCACTCACCTCTCCCTTTGAGGATGCGCCTTGTGAAGCGACATAGCGGAACATTGCTCTCAGTGATGATTCAATACGCATCAAACCCAATGTTGCCACAGCCGCTGAGCAATGTTACGTTCATTGTTAAGCTTCCTGTGGACCCAACTCTGCTAAATGTTTCACCCAAGGCTGTGCTGAATCGGGCAGAGAGGGAGCTCAGGTGGCACATCCCAGACATTCCCCTGAAAGGACCTGCTGGACGTTTGAGGGCTCGGATGCCTGTAGAT-CAGGACTCAAAGGATGGTGAGCTAGAGGTTGTTGGGATGGTGAAGTTTGCTTACCAAGGGCCATTTACATTGTCTGGCATCAAACTATGCCCAGCCACTGATGGCACGGCTCAGTTTAATGAGGCTGGCCACACCTTCTCCAGTGGGAGTTATCTGTGCATCTAATTGGTACCTTCTTTGTATTGTAGTTGTTACTTTACCCTTGATTTGTTCGGTTTGCTTCTAAAGCAGGTTGTGAAATTCCTATTGTATGTAGTGACGCTTGTTTGTTTTTTGAGGCTGGAAATTACATCATGTTTTTGATTTGTCTATTAAAAA]

[+] EMBL AK121452             [CCTCACTCCCGATCAGATCCGAGCCCTAACCCTAGCCTCTCGCCGGCGGCGGCGGCGGCGGCGATGGCGTGCCTCGCGATCTCCCTCCAGCCGGTGAACGGCCCGGACATCCTCCTCCAGACCCGATCCTGGTTCCCCGTCTCCCGCGCCCTCGCCGCCGTCTCCTCCTTCCGCCTCGCCCGCCTCCACCTCGCCCGCGGGAAGCAGCAGCAGTTGTCATCGTCGTCGTCGGCCGCCGCGGCGGCGGCGACGCTCGAGGCCATCGGCGACGACCCGCTCGCCGCCGGGTCGGGGCAGCTCGTGGTCGGGGTGGAGTCGCAGTACCGCGTCGTGTACCGCCTAGTCAACTCCATCTACGTGCTCGGCGTCACCACCTCCTCCGACCACGCCTCCCCCGCCGTCCACGCCTTCGCCGTCGCCGACGCCGTCAACCAGGCCGTCTCCGTCGTCGTCGCCGCGTGCCGCGGCGTCGACGTCACGCCGGAGAAGGTGCACCGCAAGTACCCGGAGGTCTACCTCGCCCTCGACCTCGTCCTCCACGGCGTCGGCTCCGTCCGCCTCTCCCAGATCCTCGCCACCATCCATGGCGACAACCTCGCTCGCATGGTGAATTCATCCCCTGACGCCGAGGCGAAAGCTCGTGGCGCTGATCCCTGGCCCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACGGGCGCCTCGTTCGAGCTCCCCCAGGAGACCCTTGCTGCCGGTGA CGAGTTCTCCGCGTCTAACATTGCGCCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGGAGAAGGACCCGTTTGCAGCCAGTGAACTGGTTAACAATTCTGAGGAGGCGTTGGTTGGTGGGTTCAAGAAGAACAAGGAGACCGCCATTGTGGTTGCTGATCCCGCGGCTGCGCTTGCTGGGTTGGAGGTCACGACCTTGCCACCAGCTGAGGCGACTAAGCCAACATTTATTGGAGTTGAAGGGTTTGAGGGTGACTATGGTGGAATTGAGTTTGGCAATGAGGAGGCTTCACTGGCCGAGGCATTTGAAGGGTTCAATGCGCCGTTTGGGGGTGGATTGGATGCTTCAGAGTTTGTTACCACAACAAAGAAGGACCATAAGGATAAGAGCATCACTGGTCTTGAGCTGCTAGCCACTAGTGCTGGACAGGGACCAAATGCACCTGGTGGTACCCCGCTGGAGAACTTGTTGGTGACAAAGAGCACAGAGATGACAGCCCCTGAGCTATACATCGTGGAGGAGGTCAATGCAGAATTTAAGGAGTCTATTCTTGCACGGGTTGGTTTGAAGGGTACAATCTTTCTGCGAACGTTGCCACCAAAGAAGGCGGCTGGTAAGGAGACAGAGTTCTCATTTCGTCTTGAGGGCACATCTGGAATGAAGAAGGCCGCGTTGCAGAGCACTGTGTTGAGCAACCTCGAGAATGGGATGTTCCATGTCCGGACGCCATCGAAGGAGGAACCCATCCCCATCATGAAGTACAGCTTTCTGCCCAAGCACTCACCTCTCCCTTTGAGGATGCGCCTTGTGAAGCGACATAGCGGAACATTGCTCTCAGTGATGATTCAATACGCATCAAACCCAATGTTGCCACAGCCGCTGAGCAATGTTACGTTCATTGTTAAGCTTCCTGTGGACCCAACTCTGCTAAATGTTTCACCCAAGGCTGTGCTGAATCGGGCAGAGAGGGAGCTCAGGTGGCACATCCCAGACATTCCCCTGAAAGGACCTGCTGGACGTTTGAGGGCTCGGATGCCTGTAGAT CAGGACTCAAAGGATGGTGAGCTAGAGGTTGTTGGGATGGTGAAGTTTGCTTACCAAGGGCCATTTACATTGTCTGGCATCAAACTATGCCCAGCCACTGATGGCACGGCTCAGTTTAATGAGGCTGGCCACACCTTCTCCAGTGGGAGTTATCTGTGCATCTAATTGGTACCTTCTTTGTATTGTAGTTGTTACTTTACCCTTGATTTGTTCGGTTTGCTTCTAAAGCAGGTTGTGAAATTCCTATTGTATGTAGTGACGCTTGTTTGTTTTTTGAGGCTGGAAATTACATCATGTTTTTGATTT            ]
[+] EMBL AK102707             [  TCACTCCCGATCAGATCCGAGCCCTAACCCTAGCCTCTCGCCGGCGGCGGCGGCGGCGGCGATGGCGTGCCTCGCGATCTCCCTCCAGCCGGTGAACGGCCCGGACATCCTCCTCCAGACCCGATCCTGGTTCCCCGTCTCCCGCGCCCTCGCCGCCGTCTCCTCCTTCCGCCTCGCCCGCCTCCACCTCGCCCGCGGGAAGCAGCAGCAGTTGTCATCGTCGTCGTCGGCCGCCGCGGCGGCGGCGACGCTCGAGGCCATCGGCGACGACCCGCTCGCCGCCGGGTCGGGGCAGCTCGTGGTCGGGGTGGAGTCGCAGTACCGCGTCGTGTACCGCCTAGTCAACTCCATCTACGTGCTCGGCGTCACCACCTCCTCCGACCACGCCTCCCCCGCCGTCCACGCCTTCGCCGTCGCCGACGCCGTCAACCAGGCCGTCTCCGTCGTCGTCGCCGCGTGCCGCGGCGTCGACGTCACGCCGGAGAAGGTGCACCGCAAGTACCCGGAGGTCTACCTCGCCCTCGACCTCGTCCTCCACGGCGTCGGCTCCGTCCGCCTCTCCCAGATCCTCGCCACCATCCATGGCGACAACCTCGCTCGCATGGTGAATTCATCCCCTGACGCCGAGGCGAAAGCTCGTGGCGCTGATCCCTGGCCCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACGGGCGCCTCGTTCGAGCTCCCCCAGGAGACCCTTGCTGCCGGTGA CGAGTTCTCCGCGTCTAACATTGCGCCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGGAGAAGGACCCGTTTGCAGCCAGTGAACTGGTTAACAATTCTGAGGAGGCGTTGGTTGGTGGGTTCAAGAAGAACAAGGAGACCGCCATTGTGGTTGCTGATCCCGCGGCTGCGCTTGCTGGGTTGGAGGTCACGACCTTGCCACCAGCTGAGGCGACTAAGCCAACATTTATTGGAGTTGAAGGGTTTGAGGGTGACTATGGTGGAATTGAGTTTGGCAATGAGGAGGCTTCACTGGCCGAGGCATTTGAAGGGTTCAATGCGCCGTTTGGGGGTGGATTGGATGCTTCAGAGTTTGTTACCACAACAAAGAAGGACCATAAGGATAAGAGCATCACTGGTCTTGAGCTGCTAGCCACTAGTGCTGGACAGGGACCAAATGCACCTGGTGGTACCCCGCTGGAGAACTTGTTGGTGACAAAGAGCACAGAGATGACAGCCCCTGAGCTATACATCGTGGAGGAGGTCAATGCAGAATTTAAGGAGTCTATTCTTGCACGGGTTGGTTTGAAGGGTACAATCTTTCTGCGAACGTTGCCACCAAAGAAGGCGGCTGGTAAGGAGACAGAGTTCTCATTTCGTCTTGAGGGCACATCTGGAATGAAGAAGGCCGCGTTGCAGAGCACTGTGTTGAGCAACCTCGAGAATGGGATGTTCCATGTCCGGACGCCATCGAAGGAGGAACCCATCCCCATCATGAAGTACAGCTTTCTGCCCAAGCACTCACCTCTCCCTTTGAGGATGCGCCTTGTGAAGCGACATAGCGGAACATTGCTCTCAGTGATGATTCAATACGCATCAAACCCAATGTTGCCACAGCCGCTGAGCAATGTTACGTTCATTGTTAAGCTTCCTGTGGACCCAACTCTGCTAAATGTTTCACCCAAGGCTGTGCTGAATCGGGCAGAGAGGGAGCTCAGGTGGCACATCCCAGACATTCCCCTGAAAGGACCTGCTGGACGTTTGAGGGCTCGGATGCCTGTAGAT CAGGACTCAAAGGATGGTGAGCTAGAGGTTGTTGGGATGGTGAAGTTTGCTTACCAAGGGCCATTTACATTGTCTGGCATCAAACTATGCCCAGCCACTGATGGCACGGCTCAGTTTAATGAGGCTGGCCACACCTTCTCCAGTGGGAGTTATCTGTGCATCTAATTGGTACCTTCTTTGTATTGTAGTTGTTACTTTACCCTTGATTTGTTCGGTTTGCTTCTAAAGCAGGTTGTGAAATTCCTATTGTATGTAGTGACGCTTGTTTGTTTTTTGAGGCTGGAAATTACATCATGTTTT                  ]
[+] EMBL BU667106             [                                                                                                                                                                                                                                                             TCGAGGCCATCGGCGACGACCCGCTCGCCGCCGGGTCGGGGCAGCTCGTGGTCGGGGTGGAGTCGCAGTACCGCGTCGTGTACCGCCTCGTCAACTCCATCTACGTGCTCGGCGTCACCACCTCCTCCGACCACGCCTCCCCCGCCGTCCACGCCTTCGCCGTCGCCGACGCCGTCAACCAGGCCGTCTCCGTCGTCGTCGCCGCGTGCCGCGGCGTCGACGTCACGCCGGAGAAGGTGCACCGCAAATACCCGGAGGTCTACCTCGCCCTCGACCTCGTCCTCCACGGCGTCGGCTCCGTCCGCCTCTCCCAGATCCTCGCCACCATCCATGGCGACAACCTCGCTCGCATGGTGAATTCCTCCCCCGACGCCGAGGCGAAAGCTCGTGGCGCTGATCCCTGGCCCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACGGGCGCCTCGTTCGAGCTCCCCCAGGAGACCCTTGCTGCTGGTGATAGAGTTCTCCGCGTCTAACATTGCGCCTGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGGAGAAGGATCCGTTTGCAGCCAGTGAACTTGTTAACAAGCCTGAGGAGGC ATGGTTGGTGGGTTCAAGAAGAACAAGGAGA CGCCATgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB633505             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGCTCGTGGCGCTGATCCCTGGCCCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACGGGCGCCTCGTTTGAGCTTCCCCAGGAGACCCTTGCTGCCGGTGA CGAGTTCTCCGCGTCTAACATTGCGCCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCAGAGGAGGCAGCTCCCGTGGAGAAGGACCCGTTTGCAGCCAGTGAACTGGTTAACAATTCTGAGGAGGCGTTGGTTGGTGGGTTCAAGAAGAACAAGGAGACCGCCATTGTGGTTGCTGATCCCGCGGCTGCGCTTGCTGGGTTGGAGGTCACGACCTTGCCACCAGCTGAGGCGACTAAGCCAACATTTATTGGAGTTGAAGGGTTTGAGGGTGACTATGGTGGAATTGAGTTTGGCAATGAGGAGGCTTCACTGGCCGAGGCATTTGAAGGGTTCAATGCGCCGTTTGGGGGTGGATTGGATGCTTCAGAGTTTGTTACCACAACAAAGAAGGACCATAAGGATAAGAGCATCACTGGTCTTGAGCTGCTAGCCACTAGTGCTGGACAGGGACCAAATGCACCTGGTGGTACCCCGCTGGAGAACTTGTTGGTGACAAAGAGCACAGAGATGACAGCCCCTGAGCTATACATCGTGGAGGAGGTCAATGCAGAATTTAAGGAGTCTATTCTTGCACGGGTTGGTTTGAAGGGAACAATCTTTCTGCGAACGTTGCCACCAAAGAAAGCGGCTGGTAAGGAGACAGAGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB633660             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGCTCTTGGCGCTGATCCCTGGCCCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACGGGCGCCTCGTTTGAGCTTCCCCAGGAGACCCTTGCTGCCGGTGA CGAGTTCTCCGCGTCTAACATTGCGCCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCAGAGGAGGCAGCTCCCGTGGAGAAGGACCCGTTTGCAGCCAGTGAACTGGTTAACAATTCTGAGGAGGCGTTGGTTGGTGGGTTCAAGAAGAACAAGGAGACCGCCATTGTGGTTGCTGATCCCGCGGCTGCGCTTGCTGGGTTGGAGGTCACGACCTTGCCACCAGCTGAGGCGACTAAGCCAACATTTATTGGAGTTGAAGGGTTTGAGGGTGACTATGGTGGAATTGAGTTTGGCAATGAGGAGGCTTCACTGGCCGAGGCATTTGAAGGGTTCAATGCGCCGTTTGGGGGTGGATTGGATGCTTCAGAGTTTGTTACCACAACAAAGAAGGACCATAAGGATAAGAGCATCACTGGTCTTGAGCTGCTAGCCACTAGTGCTGGACAGGGACCAAATGCACCTGGTGGTACCCCGCTGGAGAACTTGTTGGTGACAAAGAGCACAGAGATGACAGCCCCTGAGCTATACATCGTGGAGGAGGTCAATGCAGAATTTAAGGAGTCTATTCTTGCACGGGTTGGTTTGAAGGGAACAATCTTTCTGCGAACGTTGCCACCAAAGAAGGCGGCTGGTAAGGAGACAGAGTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB633661             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATTTAAGGAGTCTATTCTTGCACGGGTTGGTTTGAAGGGAACAATCTTTCTGCGAACGTTGCCACCAAAGAAGGCGGCTGGTAAGGAGACAGAGTTCTCATTTCGTCTTGAGGGCACATCTGGAATGAAGAAGGCCGCGTTGCAGAGCACTGTGTTGAGCAACCTCGAGAATGGGATGTTCCATGTCCGGACGCCATCGAAGGAGGAACCCATCCCCATCATGAAGTACAGCTTTCTGCCCAAGCACTCACCTCTCCCTTTGAGGATGCGCCTTGTGAAGCGACATAGCGGAACATTGCTCTCAGTGATGATTCAATACGCATCAAACCCAATGTTGCCACAGCCGCTGAGCAATGTTACGTTCATTGTTAAGCTTCCTGTGGACCCAACTCTGCTAAATGTTTCACCCAAGGCTGTGCTGAATCGGGCAGAGAGGGAGCTCAGGTGGCACATCCCAGACATTCCCCTGAAAGGACCTGCTGGACGTTTGAGGGCTCGGATGCCTGTAGAT CAGGACTCAAAGGATGGTGAGCTAGAGGTTGTTGGGATGGTGAAGTTTGCTTACCAAGGGCCATTTACATTGTCTGGCATCAAACTCTGCCCAGCCACTGATGGCACGGCTCAGTTTAATGAGGCTGGCCACACCTTCTCCAGTGGGAGTTATCTGTGCATCTAATTGGTACCTTCTTTGTATTGTAGTTGTTACTTTACCCTTGATTTGTTCGGTTTGCTTCTAAAGCAGGTTGTGAAATTCCTATTGTATGTAGTGGCGCTTGTTTGTTTTTTGAGGCTGGAAATTACAT                          ]
[-] EMBL CB633506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTTGCACGGGTTGGTTTGAAGGGAACAATCTTTCTGCGAACGTTGCCACCAAAGAAGGCGGCTGGTAAGGAGACAGAGTTCTCATTTCGTCTTGAGGGCACATCTGGAATGAAGAAGGCCGCGTTGCAGAGCACTGTGTTGAGCAACCTCGAGAATGGGATGTTCCATGTCCGGACGCCATCGAAGGAGGAACCCATCCCCATCATGAAGTACAGCTTTCTGCCCAAGCACTCACCTCTCCCTTTGAGGATGCGCCTTGTGAAGCGACATAGCGGAACATTGCTCTCAGTGATGATTCAATACGCATCAAACCCAATGTTGCCACAGCCGCTGAGCAATGTTACGTTCATTGTTAAGCTTCCTGTGGACCCAACTCTGCTAAATGTTTCACCCAAGGCTGTGCTGAATCGGGCAGAGAGGGAGCTCAGGTGGCACATCCCAGACATTCCCCTGAAAGGACCTGCTGGACGTTTGAGGGCTCGGATGCCTGTAGAT CAGGACTCAAAGGATGGTGAGCTAGAGGTTGTTGGGATGGTGAAGTTTGCTTACCAAGGGCCATTTACATTGTCTGGCATCAAACTCTGCCCAGCCACTGATGGCACGGCTCAGTTTAATGAGGCTGGCCACACCTTCTCCAGTGGGAGTTATCTGTGCATCTAATTGGTACCTTCTTTGTATTGTAGTTGTTACTTTACCCTTGATTTGTTCGGTTTGCTTCTAAAGCAGGTTGTGAAATTCCTATTGTATGTAGTGGCGCTTGTTTGTTTTTTGAGGCTGGAAATTACAT                          ]
[-] EMBL AW070124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTGCGAACGTTGCCACCAAAGAAGGCGGCTGGTAAGGAGACAGAGTTCTCATTTCGTCTTGAGGGCACATCTGGAATGAAGAAGGCCGCGTTGCAGAGCACTGTGTTGAGCAACCTCGAGAATGGGATGTTCCATGTCCGGACGCCATCGAAGGAGGAACCCATCCCCATCATGAAGTACctgcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU032544             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAAAGNA CTGCTGGACNTTTGAGGGCTCGGATGCCTGTAGATCCAGGACTCAAAGGATGNTGAGCTAGAGGTTGTTGGGATGGTGAAGTTTGCTTACCAAGGGCCATTTACATTGTCTGGCATCAAACTATGCCCAGCCACTGATGGCACGGCTCAGTTTAATGAGGCTGGCCACACCTTCTCCAGTGGGAGTTATCTGTGCATCTAATTGGTACCTTCTTTGTATTGTAGTTGTTACTTTACCCTTGATTTGTTCGGTTTGCTTCTAAAGCAGGTTGTGAAATTCCTATTGTATGTNGTGACGCTTGTTTGTTTTTTGAGGCTGGAAATTACATCATGTTTTTGATTTGTCTATTAAAAA]




>consensus_12691#0
CCTCACTCCCGATCAGATCCGAGCCCTAACCCTAGCCTCTCGCCGGCGGCGGCGGCGGCG
GCGATGGCGTGCCTCGCGATCTCCCTCCAGCCGGTGAACGGCCCGGACATCCTCCTCCAG
ACCCGATCCTGGTTCCCCGTCTCCCGCGCCCTCGCCGCCGTCTCCTCCTTCCGCCTCGCC
CGCCTCCACCTCGCCCGCGGGAAGCAGCAGCAGTTGTCATCGTCGTCGTCGGCCGCCGCG
GCGGCGGCGACGCTCGAGGCCATCGGCGACGACCCGCTCGCCGCCGGGTCGGGGCAGCTC
GTGGTCGGGGTGGAGTCGCAGTACCGCGTCGTGTACCGCCTAGTCAACTCCATCTACGTG
CTCGGCGTCACCACCTCCTCCGACCACGCCTCCCCCGCCGTCCACGCCTTCGCCGTCGCC
GACGCCGTCAACCAGGCCGTCTCCGTCGTCGTCGCCGCGTGCCGCGGCGTCGACGTCACG
CCGGAGAAGGTGCACCGCAAGTACCCGGAGGTCTACCTCGCCCTCGACCTCGTCCTCCAC
GGCGTCGGCTCCGTCCGCCTCTCCCAGATCCTCGCCACCATCCATGGCGACAACCTCGCT
CGCATGGTGAATTCATCCCCTGACGCCGAGGCGAAAGCTCGTGGCGCTGATCCCTGGCCC
GCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACGGGCGCCTCG
TTCGAGCTCCCCCAGGAGACCCTTGCTGCCGGTGACGAGTTCTCCGCGTCTAACATTGCG
CCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGGAG
AAGGACCCGTTTGCAGCCAGTGAACTGGTTAACAATTCTGAGGAGGCGTTGGTTGGTGGG
TTCAAGAAGAACAAGGAGACCGCCATTGTGGTTGCTGATCCCGCGGCTGCGCTTGCTGGG
TTGGAGGTCACGACCTTGCCACCAGCTGAGGCGACTAAGCCAACATTTATTGGAGTTGAA
GGGTTTGAGGGTGACTATGGTGGAATTGAGTTTGGCAATGAGGAGGCTTCACTGGCCGAG
GCATTTGAAGGGTTCAATGCGCCGTTTGGGGGTGGATTGGATGCTTCAGAGTTTGTTACC
ACAACAAAGAAGGACCATAAGGATAAGAGCATCACTGGTCTTGAGCTGCTAGCCACTAGT
GCTGGACAGGGACCAAATGCACCTGGTGGTACCCCGCTGGAGAACTTGTTGGTGACAAAG
AGCACAGAGATGACAGCCCCTGAGCTATACATCGTGGAGGAGGTCAATGCAGAATTTAAG
GAGTCTATTCTTGCACGGGTTGGTTTGAAGGGAACAATCTTTCTGCGAACGTTGCCACCA
AAGAAGGCGGCTGGTAAGGAGACAGAGTTCTCATTTCGTCTTGAGGGCACATCTGGAATG
AAGAAGGCCGCGTTGCAGAGCACTGTGTTGAGCAACCTCGAGAATGGGATGTTCCATGTC
CGGACGCCATCGAAGGAGGAACCCATCCCCATCATGAAGTACAGCTTTCTGCCCAAGCAC
TCACCTCTCCCTTTGAGGATGCGCCTTGTGAAGCGACATAGCGGAACATTGCTCTCAGTG
ATGATTCAATACGCATCAAACCCAATGTTGCCACAGCCGCTGAGCAATGTTACGTTCATT
GTTAAGCTTCCTGTGGACCCAACTCTGCTAAATGTTTCACCCAAGGCTGTGCTGAATCGG
GCAGAGAGGGAGCTCAGGTGGCACATCCCAGACATTCCCCTGAAAGGACCTGCTGGACGT
TTGAGGGCTCGGATGCCTGTAGATCAGGACTCAAAGGATGGTGAGCTAGAGGTTGTTGGG
ATGGTGAAGTTTGCTTACCAAGGGCCATTTACATTGTCTGGCATCAAACTATGCCCAGCC
ACTGATGGCACGGCTCAGTTTAATGAGGCTGGCCACACCTTCTCCAGTGGGAGTTATCTG
TGCATCTAATTGGTACCTTCTTTGTATTGTAGTTGTTACTTTACCCTTGATTTGTTCGGT
TTGCTTCTAAAGCAGGTTGTGAAATTCCTATTGTATGTAGTGACGCTTGTTTGTTTTTTG
AGGCTGGAAATTACATCATGTTTTTGATTTGTCTATTAAAAA

consensusID : consensus_12691#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 261
fasta sequence

                              [ATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCNATGGCTTCACGGGCGCCTCGTTCGAGCTCCCCCAGGAGACCCTTGCTGCCGGTGACGAGTTCTCCGCGTCTAACATTGCGCCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGGAGAAGGACCCGTTTGCAGCCAGTNAACTGGTTAACAATTCTGA]

[+] EMBL AU162814             [ATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCNATGGCTTCACGGGCGCCTCGTTCGAGCTCCCCCAGGAGACCCTTGCTGCCGGTGACGAGTTCTCCGCGTCTAACATTGCGCCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGGAGAAGGACCCGTTTGCAGCCAGTNAACTGGTTAACAATTCTGA]
[+] EMBL AU162825             [ATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACGGGCGCCTCGTTCGAGCTNCCCCAGGAGACCCTTNCTGCCGGTGACGNGGTCTNCGCGTCTAACATTGNGGCGGCGGCTGCTGCGGCTACTNGGGATGAGNCTNCACC                                                               ]




>consensus_12691#1
ATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGTCGAGCACCTCGCCCA
CGATCGCCATGCCGCTCGCNATGGCTTCACGGGCGCCTCGTTCGAGCTCCCCCAGGAGAC
CCTTGCTGCCGGTGACGAGTTCTCCGCGTCTAACATTGCGCCGGCGGCTGCTGCGGCTAC
TGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGGAGAAGGACCCGTTTGCAGCCAG
TNAACTGGTTAACAATTCTGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12691#0      CCTCACTCCCGATCAGATCCGAGCCCTAACCCTAGCCTCTCGCCGGCGGCGGCGGCGGCG 60
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GCGATGGCGTGCCTCGCGATCTCCCTCCAGCCGGTGAACGGCCCGGACATCCTCCTCCAG 120
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      ACCCGATCCTGGTTCCCCGTCTCCCGCGCCCTCGCCGCCGTCTCCTCCTTCCGCCTCGCC 180
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      CGCCTCCACCTCGCCCGCGGGAAGCAGCAGCAGTTGTCATCGTCGTCGTCGGCCGCCGCG 240
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GCGGCGGCGACGCTCGAGGCCATCGGCGACGACCCGCTCGCCGCCGGGTCGGGGCAGCTC 300
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GTGGTCGGGGTGGAGTCGCAGTACCGCGTCGTGTACCGCCTAGTCAACTCCATCTACGTG 360
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      CTCGGCGTCACCACCTCCTCCGACCACGCCTCCCCCGCCGTCCACGCCTTCGCCGTCGCC 420
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GACGCCGTCAACCAGGCCGTCTCCGTCGTCGTCGCCGCGTGCCGCGGCGTCGACGTCACG 480
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      CCGGAGAAGGTGCACCGCAAGTACCCGGAGGTCTACCTCGCCCTCGACCTCGTCCTCCAC 540
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GGCGTCGGCTCCGTCCGCCTCTCCCAGATCCTCGCCACCATCCATGGCGACAACCTCGCT 600
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      CGCATGGTGAATTCATCCCCTGACGCCGAGGCGAAAGCTCGTGGCGCTGATCCCTGG--C 658
consensus_12691#1      ----------------------ATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACT 38
                                             * *****   *  * *    *  * ** *    **   

consensus_12691#0      CCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACGGGCGCCT 718
consensus_12691#1      CCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCNATGGCTTCACGGGCGCCT 98
                       ***************************************** ******************

consensus_12691#0      CGTTCGAGCTCCCCCAGGAGACCCTTGCTGCCGGTGACGAGTTCTCCGCGTCTAACATTG 778
consensus_12691#1      CGTTCGAGCTCCCCCAGGAGACCCTTGCTGCCGGTGACGAGTTCTCCGCGTCTAACATTG 158
                       ************************************************************

consensus_12691#0      CGCCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGG 838
consensus_12691#1      CGCCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGG 218
                       ************************************************************

consensus_12691#0      AGAAGGACCCGTTTGCAGCCAGTGAACTGGTTAACAATTCTGAGGAGGCGTTGGTTGGTG 898
consensus_12691#1      AGAAGGACCCGTTTGCAGCCAGTNAACTGGTTAACAATTCTGA----------------- 261
                       *********************** *******************                 

consensus_12691#0      GGTTCAAGAAGAACAAGGAGACCGCCATTGTGGTTGCTGATCCCGCGGCTGCGCTTGCTG 958
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GGTTGGAGGTCACGACCTTGCCACCAGCTGAGGCGACTAAGCCAACATTTATTGGAGTTG 1018
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      AAGGGTTTGAGGGTGACTATGGTGGAATTGAGTTTGGCAATGAGGAGGCTTCACTGGCCG 1078
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      AGGCATTTGAAGGGTTCAATGCGCCGTTTGGGGGTGGATTGGATGCTTCAGAGTTTGTTA 1138
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      CCACAACAAAGAAGGACCATAAGGATAAGAGCATCACTGGTCTTGAGCTGCTAGCCACTA 1198
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GTGCTGGACAGGGACCAAATGCACCTGGTGGTACCCCGCTGGAGAACTTGTTGGTGACAA 1258
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      AGAGCACAGAGATGACAGCCCCTGAGCTATACATCGTGGAGGAGGTCAATGCAGAATTTA 1318
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      AGGAGTCTATTCTTGCACGGGTTGGTTTGAAGGGAACAATCTTTCTGCGAACGTTGCCAC 1378
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      CAAAGAAGGCGGCTGGTAAGGAGACAGAGTTCTCATTTCGTCTTGAGGGCACATCTGGAA 1438
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      TGAAGAAGGCCGCGTTGCAGAGCACTGTGTTGAGCAACCTCGAGAATGGGATGTTCCATG 1498
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      TCCGGACGCCATCGAAGGAGGAACCCATCCCCATCATGAAGTACAGCTTTCTGCCCAAGC 1558
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      ACTCACCTCTCCCTTTGAGGATGCGCCTTGTGAAGCGACATAGCGGAACATTGCTCTCAG 1618
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      TGATGATTCAATACGCATCAAACCCAATGTTGCCACAGCCGCTGAGCAATGTTACGTTCA 1678
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      TTGTTAAGCTTCCTGTGGACCCAACTCTGCTAAATGTTTCACCCAAGGCTGTGCTGAATC 1738
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GGGCAGAGAGGGAGCTCAGGTGGCACATCCCAGACATTCCCCTGAAAGGACCTGCTGGAC 1798
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GTTTGAGGGCTCGGATGCCTGTAGATCAGGACTCAAAGGATGGTGAGCTAGAGGTTGTTG 1858
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GGATGGTGAAGTTTGCTTACCAAGGGCCATTTACATTGTCTGGCATCAAACTATGCCCAG 1918
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      CCACTGATGGCACGGCTCAGTTTAATGAGGCTGGCCACACCTTCTCCAGTGGGAGTTATC 1978
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      TGTGCATCTAATTGGTACCTTCTTTGTATTGTAGTTGTTACTTTACCCTTGATTTGTTCG 2038
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      GTTTGCTTCTAAAGCAGGTTGTGAAATTCCTATTGTATGTAGTGACGCTTGTTTGTTTTT 2098
consensus_12691#1      ------------------------------------------------------------
                                                                                   

consensus_12691#0      TGAGGCTGGAAATTACATCATGTTTTTGATTTGTCTATTAAAAA 2142
consensus_12691#1      --------------------------------------------