cluster # 12694

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Oryza sativa
cluster # 12694 cluster # 12694 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12694#0 length = 1824 sequences # 10

consensus_12694#1 length = 517 sequences # 1

consensusID : consensus_12694#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1824
fasta sequence

                              [CGATTCTCCCTTCTCTCCACGATTTCTCCATTCTTCTTCTTCTCCTCCTCTCCACTACTCTATCCTCTTCTTCTTCTTCGTAGCCTTCGAGCTCGAGCTCCTCCATAGATTAGCTTGGCTACCACCGGAGAAGAGTCCGGGGAGTCGGAAACTCGTAGCTGGGGTTCGTTGCGGCGGTCGGGGCGGCCGAATTGATTGGTTGGGTCGGAGCGGATGATGATGGCGAACGCGAAGCTGCCCAAGCAGGCGCTGCTGCCGCCGCGCAGCCCGTTCCCGACGGCGGCGGCGGCGGCGGGGCCGTACGCCGGCGACCACGGCCCGATCGCGCGGCCGCAGGGTGCGCCGCACCACAGGCACGGGCACGGCCACGGGCACCACCAGCGCACGTCGTCGGAGAGCTTCATCGAGGAGCAGCCGTCGTGGCTCGACGACCTGCTCAACGAGCCCGAGACGCCGGTGCGGCAGCACGGCCGGGCCGGCCACCGCCGGTCGTCGAGTGACTCGTTTGCGATGTTCGACGGAGGCGCCGCCGCCGGCGCTTACGCCAATGGCTTTGAAGGGATGGGAGGAGGAGGAGGAGGAGGGCAGGCCGCGCCGTGGGGTGGTGTGCAGGAGTACTATGCGAAGCCAAGCTCGTTTGGTAGGCACCAGGGCCGGCCATGGGAGCAGGGCATGAACAATTTGGTGAATTACAGGCAAAGCGGCGGTCCACCGATGCCGGCGAAGGAGAAGGTTGGTGGGCACCATGGGTCGCCGAGCGTGTTGAGGGATCATGATCATGGTAT-GGACAGGAGATCCTCGGACGAATCGGGGCATGATCAGAAGGTTGGGCCTGAGAGGAAGGAGGGCGTGCCGCCGAAGCATGCACAATCCGAGGCGGACACCAAGCGCGCTAAACAGCAATATGCTCAAAGGTCCCGCGTTCGGAAGCTTCAATATATTGCAGAGCTTGAGAGAAAAGTTCAGGCATTACAGTCAGAAGGGATAGATGTGTCTGCTGAAATGGAGTTTCTTAGCCAACAGAATATTATGCTTGACTTGGAAAACAAAGCCTTAAAGCAAAGGCTGGAAAGTCTAGCTCAAGAGCAACTAATTAAACGCTTTCAACAGGAGATGTTTGAGCGGGAAATTGGTCGTCTCAGATCATTGTACCAGCAGCAGCAGCAGCAACAG-AAGCAGCCGCAA-CCTACTACTACCCTCAGTCGAAGTAACAGCAGAGACCTGGATTCACAGTTTGCTAATCTGTCTCTGAAACACAAAGACCCCAACTCTGGGCCTCTTCGTACTCAGTCCTCGTCAATCTTGTGAGTTCCACACAAAGTTGCCACAACTCCTAGATAACTCTTTGTGGCTGTCATCTGCATCAAGAAAGGAGCAGGCGCACCTGGAATCGTGTACCCCCATCTATGGTGAATAATAACACTGGAAAGGCTAATAACTGTGGATCTGATCTTTATTCTTTTGGAATATGCACCTGGCGGTCATCCTCAGCTCACTTCCATTGTTGATGCTCGACCAGTCGGAGGTGTTTAGGGTTTTTCTTTGTAGTTTGATGCTTTTATTATCGCATCGTTGTACCATTTTCGAAATGCTAGGGTTCTAATTTGTTACCGTCCTGTTCCCTGTGATCATGCATTATGTTAGCGATATTTGGATTAGTCTTGCCTTTATCAATGGAATGTGGAGCACTAGTCAGCATCTGGTACATACAGATGTTTTGAAATTGTGCCACATCCTTGAGAAACCGTATGTGTTGTAACATTGTTATTCAATAAGCTAGTGCAAATGAAGTATTAGCGTTGTTCAGTGTTCCAAAAAAAAAAA]

[+] EMBL AK072267             [CGATTCTCCCTTCTCTCCACGATTTCTCCATTCTTCTTCTTCTCCTCCTCTCCACTACTCTATCCTCTTCTTCTTCTTCGTAGCCTTCGAGCTCGAGCTCCTCCATAGATTAGCTTGGCTACCACCGGAGAAGAGTCCGGGGAGTCGGAAACTCGTAGCTGGGGTTCGTTGCGGCGGTCGGGGCGGCCGAATTGATTGGTTGGGTCGGAGCGGATGATGATGGCGAACGCGAAGCTGCCCAAGCAGGCGCTGCTGCCGCCGCGCAGCCCGTTCCCGACGGCGGCGGCGGCGGCGGGGCCGTACGCCGGCGACCACGGCCCGATCGCGCGGCCGCAGGGTGCGCCGCACCACAGGCACGGGCACGGCCACGGGCACCACCAGCGCACGTCGTCGGAGAGCTTCATCGAGGAGCAGCCGTCGTGGCTCGACGACCTGCTCAACGAGCCCGAGACGCCGGTGCGGCAGCACGGCCGGGCCGGCCACCGCCGGTCGTCGAGTGACTCGTTTGCGATGTTCGACGGAGGCGCCGCCGCCGGCGCTTACGCCAATGGCTTTGAAGGGATGGGAGGAGGAGGAGGAGGAGGGCAGGCCGCGCCGTGGGGTGGTGTGCAGGAGTACTATGCGAAGCCAAGCTCGTTTGGTAGGCACCAGGGCCGGCCATGGGAGCAGGGCATGAACAATTTGGTGAATTACAGGCAAAGCGGCGGTCCACCGATGCCGGCGAAGGAGAAGGTTGGTGGGCACCATGGGTCGCCGAGCGTGTTGAGGGATCATGATCATGGTAT GGACAGGAGATCCTCGGACGAATCGGGGCATGATCAGAAGGTTGGGCCTGAGAGGAAGGAGGGCGTGCCGCCGAAGCATGCACAATCCGAGGCGGACACCAAGCGCGCTAAACAGCAATATGCTCAAAGGTCCCGCGTTCGGAAGCTTCAATATATTGCAGAGCTTGAGAGAAAAGTTCAGGCATTACAGTCAGAAGGGATAGATGTGTCTGCTGAAATGGAGTTTCTTAGCCAACAGAATATTATGCTTGACTTGGAAAACAAAGCCTTAAAGCAAAGGCTGGAAAGTCTAGCTCAAGAGCAACTAATTAAACGCTTTCAACAGGAGATGTTTGAGCGGGAAATTGGTCGTCTCAGATCATTGTACCAGCAGCAGCAGCAGCAACAG AAGCAGCCGCAA CCTACTACTACCCTCAGTCGAAGTAACAGCAGAGACCTGGATTCACAGTTTGCTAATCTGTCTCTGAAACACAAAGACCCCAACTCTGGGCCTCTTCGTACTCAGTCCTCGTCAATCTTGTGAGTTCCACACAAAGTTGCCACAACTCCTAGATAACTCTTTGTGGCTGTCATCTGCATCAAGAAAGGAGCAGGCGCACCTGGAATCGTGTACCCCCATCTATGGTGAATAATAACACTGGAAAGGCTAATAACTGTGGATCTGATCTTTATTCTTTTGGAATATGCACCTGGCGGTCATCCTCAGCTCACTTCCATTGTTGATGCTCGACCAGTCGGAGGTGTTTAGGGTTTTTCTTTGTAGTTTGATGCTTTTATTATCGCATCGTTGTACCATTTTCGAAATGCTAGGGTTCTAATTTGTTACCGTCCTGTTCCCTGTGATCATGCATTATGTTAGCGATATTTGGATTAGTCTTGCCTTTATCAATGGAATGTGGAGCACTAGTCAGCATCTGGTACATACAGATGTTTTGAAATTGTGCCACATCCTTGAGAAACCGTATGTGTTGTAACATTGTTATTCAATAAGCTAGTGCAAATGAAGTATTAGCGTTGT                     ]
[+] EMBL CB641762             [                                         CTCCTCCTCTCCACTACTCTATCCTCTTCTTCTTCTTCGTAGCCTTCGAGCTCGAGCTCCTCCATAGATTAGCTTGGCTACCACCGGAGAAGAGTCCGGGGAGTCGGAAACTCGTAGCTGGGGTTCGTTGCGGCGGTCGGGGCGGCCGAATTGATTGGTTGGGTCGGAGCGGATGATGATGGCGAACGCGAAGCTGCCCAAGCAGGCGCTGCTGCCGCCGCGCAGCCCGTTCCCGACGGCGGCGGCGGCGGCGGGGCCGTACGCCGGCGACCACGGCCCGATCGCGCGGCCGCAGGGTGCGCCGCACCACAGGCACGGGCACGGCCACGGGCACCACCAGCGCACGTCGTCGGAGAGCTTCATCGAGGAGCAGCCGTCGTGGCTCGACGACCTGCTCAACGAGCCCGAGACGCCGGTGCGGCAGCACGGCCGGGCCGGCCACCGCCGGTCGTCGAGTGACTCGTTTGCGATGTTCGACGGAGGCGCCGCCGCCGGCGCTTACGCCAATGGCTTTGAAGGGATGGGAGGAGGAGGAGGAGGAGGGCAGGCCGCGCCGTGGGGTGGTGTGCAGGAGTACTATGCGAAGCCAAGCTCGTTTGGTAGGCACCAGGGCCGGCCATGGGAGCAGGGCATGAACAATTTGGTGAATTACAGGCAAAGCGGCGGTCCACCGATGCCGGCGAAGGAGAAGGTTGGTGGGCACCATGGGTCGCCGAGCGTGTTGAGGGATCATGATCATGGTATGGGAC GGAGATCCTCCGACGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB635087             [                                                                  CTTTCTCTTCTTCGTAGCCTTCGAGCTCGAGCTCCTCCATAGATTAGCTTGGCTACCACCGGAGAAGAGTCCGGGGAGTCGGAAACTCGTAGCTGGGGTTCGTTGCGGCGGTCGGGGCGGCCGAATTGATTGGTTGGGTCGGAGCGGATGATGATGGCGAACGCGAAGCTGCCCAAGCAGGCGCTGCTGCCGCCGCGCAGCCCGTTCCCGACGGCGGCGGCGGCGGCGGGGCCGTACGCCGGCGACCACGGCCCGATCGCGCGGCCGCAGGGCGCGCCGCACCACAGGCACGGGCACGGCCACGGGCACCACCAGCGCACGTCGTCGGAGAGCTTCATCGAGGAGCAGCCGTCGTGGCTCGACGACCTGCTCAACGAGCCCGAGACGCCGGTGCGGCAGCACGGCCGGGCCGGCCACCGCCGGTCGTCGAGTGACTCGTTTGCGATGTTTGACGGAGGCGCCGCCGCCGGCGCTTACGCCAATGGCTTTGAAGGGATGGGAGGAGGAGGAGGAGGAGGGCAGGCCTCGCCGTGGGGTGGTGTGCAGGAGTACTATGCAAATCCAAGCTCGTGTGGTAGGCACCACGGCCGGCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB640374             [                                                                                 AGCCTTCGAGCTCGAGCTCCTCCATAGATTAGCTTGGCTACCACCGGAGAAGAGTCCGGGGAGTCGGAAACTCGTAGCTGGGGTTCGTTGCGGCGGTCGGGGCGGCCGAATTGATTGGTTGGGTCGGAGCGGATGATGATGGCGAACGCGAAGCTGCCCAAGCAGGCGCTGCTTTTTTTTCGCAGCCCGTTCCCGACGGCGGCGGCGGCGGCGGGGCCGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF196887             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCGAAGCATGCACAATCCGAGGCGGACACCAAGCGCGCTAAACAGCAATATGCTCAAAGGTCCCGCGTTCGGAAGCTTCAATATATTGCAGAGCTTGAGAGAAAAGTTCAGGCATTACAGTCAGAAGGGATAGATGTGTCTGCTGAAATGGAGTTTCTTAGCCAACAGAATATTATGCTTGACTTGGAAAACAAAGCCTTAAAGCAAAGGCTGGAAAGTCTAGCTCAAGAGCAACTAATTAAACGCTTTCAACAGGAGATGTTTGAGCGGGAAATTGGTCGTCTCAGATCATTGTACCAGCAGCAGCAGCAGCAACAG AAGCAGCCGCAA CCTACTACTACCCTCAGTCGAAGTAACAGCAGAGACCTGGATTCACAGTTTGCTAATCTGTCTCTGAAACACAAAGACCCCAACTCTGGGCCTCTTCGTACTCAGTCCTCGTCAATCTTGTGAGTTCCACACAAAGTTGCCACAACTCCTAGATAACTCTTTGTGGCTGTCATCTGCATCAAGAAAGGAGCAGGCGCACCTGGAATCGTGTACCCCCATCTATGGTGNNTANTNNNACTGGANNGGCTANTNNNNNNNGATCTGAT                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB641763             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTCAACAGGAGATGTTTGAGCGGGAAATTGGTCGTCTCAGATCATTGTACCAGCAGCAGCAGCAGCAACAG AAGCAGCCGCAA CCTATTACTACCCTCAGTGGAAGTAACAGCAGAGACCTGGATTCACAGTTTGCTAATCTGTCTCTGAAACACAAAGACCCCAACTCTGGGCCTCTTCGTACTCAGTCCTCGTCAATCTTGTGAGTTCCACACAAAGTTGCCACAACTCCTAGATAACTCTTTGTGGCTGTCATCTGCATCAAGAAAGGAGCAGGCGCACCTGGAATCGTGTACCCCCATCTATGGTGAATAATAACACTGGAAAGGCTAATAACTGTGGATCTGATCTTTATTCTTTTGGAATATGCACCTGGCGGTCATCCTCAGCTCACTTCCATTGTTGATGCTCGACCAGTCGGAGGTGTTTAGGGTTTTTCTTTGTAGTTTGATGCTTTTATTATCGCATCGTTGTACCATTTTGGAAATGCTAGGGTTTTAATTTGTTACCGTCCTGTTCCCTGTGATCATGCATTATGTTAGGGATATTTGGATTAGTCTTGCCTTTATCAATGGAATGTGGAGCACTAGTCAGCATTTGGTACATACAGATGTTTTGAAATTGTGCCACATCCTTGAGAAACCGTATGTGTTGTAACATTGTTATTCAATAAGCTAGTGCAAAGGAAGTATTAGCGTTGTTCAGTG               ]
[-] EMBL CA761311             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCATTGTTCCAGCAGCAGCAGCAGCAACAGAAAGCAGCCCCAACCCTACTACTACCCTCAGTCGAAGTAACAGCAGAGACCTGGATTCACAGTNTGCTAATCTGTCTCTGAAACACAAAGACCCCAACTCTGGGCCTTTTCGTACTCAGTCCTNGTCAATCTTGTGAGTTCCACACAAAGTTGCCACAACTCCTAGATAACTCTTTGTGGCTGTCATNTGCATCAAGAAAGGAGCAGGCGCACCTGGAATCGTGTACCCCCATCTATGGTGAATAATAACACTGGAAAGGCTAATAACTGTGGATCTGATCTTTATTCTTTTGGAATATGCACCTGGCGGTCATCCTCAGCTCACTTCCATTGTTGATGCTCGACCAGTNGGAGGTGTTTAGGGTTTTTCTTTGTAGTTTGATGCTTTTGTTATCGCATCGTTGTACCATTTTCGGAATGCTAGGGTTCTAATTTGTTACCGTCCTGTTCCCTGTGATCATGCATTATGTTAGCGATATTTGGATTAGTCTTGCCTTTATCAATGGAATGTGGAGCACTAGTCAGCATTTGGTACATACAGATGTTTTGAAATTGTGCCACATCCTTGAGAAACCGTATGTGTTGTAACATTGTTATTCAATAAGCTAGTGCAAATGAAGTATTA CGTTGTTCAGTGTTCCAAAAAAAAAAA]
[-] EMBL BU673390             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCAACTCTGGGCCTCTTCGTACTCAGTCCTCGTCAATCTTGTGAGTTCCACACAAAGTTGCCACAACTCCTAGATAACTCTTTGTGNCTGTCATCTGCATCAAGAAAGGAGCAGGCGCACCTGGAATCGTGTACCCCCATCTATGGTGAATAATAACACTGGAAAGGCTAATAACTGTGGATCTGATCTTTATTCTTTTGGAATATGCACCTGGCGGTCATCCTCAGCTCACTTCCATTGTTGATGCTCGACCAGTCGGAGGTGTTTAGGGTTTTTCTTTGTAGTTTGATGCTTTTATTATCGCATCGTTGTACCATTTTCGGAATGCTAGGGTTCTAATTTGTTACCGTCCTGTTCCCTGTGATCATGCATTATGTTAGCGATATTTGGATTAGTCTTGCCTTTATCAATGGAATGTGGAGCACTAATCAGCATCTGGTACATACAGATGTTTTGAAATTGTGCCACATCCTTGAGAAACCGTATGTGTTGTAACATTGTTATTCAATAAGCTAGTGCAAA                                      ]
[+] EMBL CF312667             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTGTAGTTTGATGCTTTTATTATCGCATCGTTGTACCATTTTCGAAATGCTAGGGTTCTAATTTGTTACCGTCCTGTTCCCTGTGATCATGCATTATGTTAGCGATATTTGGATTAGTCTTGCCTTTATCAATGGAATGTGGAGCACTAGTCAGCATCTGGTACATACAGATGTTTTGAAATTGTGCCACATCCTTGAGAAACCGTATGTGTTGTAACATTGTTATTCAATAAGCTAGTGCAAATGAAGTATTAGCGTTGTTCAGTGTTCCAAAAA      ]
[-] EMBL CF312666             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTGTAGTTTGATGCTTTTATTATCGCATCGTTGTACCATTTTCGAAATGCTAGGGTTCTAATTTGTTACCGTCCTGTTCCCTGTGATCATGCATTATGTTAGCGATATTTGGATTAGTCTTGCCTTTATCAATGGAATGTGGAGCACTAGTCAGCATCTGGTACATACAGATGTTTTGAAATTGTGCCACATCCTTGAGAAACCGTATGTGTTGTAACATTGTTATTCAATAAGCTAGTGCAAATGAAGTATTAGCGTTGTTCAGTGTTCCAAAAAA     ]




>consensus_12694#0
CGATTCTCCCTTCTCTCCACGATTTCTCCATTCTTCTTCTTCTCCTCCTCTCCACTACTC
TATCCTCTTCTTCTTCTTCGTAGCCTTCGAGCTCGAGCTCCTCCATAGATTAGCTTGGCT
ACCACCGGAGAAGAGTCCGGGGAGTCGGAAACTCGTAGCTGGGGTTCGTTGCGGCGGTCG
GGGCGGCCGAATTGATTGGTTGGGTCGGAGCGGATGATGATGGCGAACGCGAAGCTGCCC
AAGCAGGCGCTGCTGCCGCCGCGCAGCCCGTTCCCGACGGCGGCGGCGGCGGCGGGGCCG
TACGCCGGCGACCACGGCCCGATCGCGCGGCCGCAGGGTGCGCCGCACCACAGGCACGGG
CACGGCCACGGGCACCACCAGCGCACGTCGTCGGAGAGCTTCATCGAGGAGCAGCCGTCG
TGGCTCGACGACCTGCTCAACGAGCCCGAGACGCCGGTGCGGCAGCACGGCCGGGCCGGC
CACCGCCGGTCGTCGAGTGACTCGTTTGCGATGTTCGACGGAGGCGCCGCCGCCGGCGCT
TACGCCAATGGCTTTGAAGGGATGGGAGGAGGAGGAGGAGGAGGGCAGGCCGCGCCGTGG
GGTGGTGTGCAGGAGTACTATGCGAAGCCAAGCTCGTTTGGTAGGCACCAGGGCCGGCCA
TGGGAGCAGGGCATGAACAATTTGGTGAATTACAGGCAAAGCGGCGGTCCACCGATGCCG
GCGAAGGAGAAGGTTGGTGGGCACCATGGGTCGCCGAGCGTGTTGAGGGATCATGATCAT
GGTATGGACAGGAGATCCTCGGACGAATCGGGGCATGATCAGAAGGTTGGGCCTGAGAGG
AAGGAGGGCGTGCCGCCGAAGCATGCACAATCCGAGGCGGACACCAAGCGCGCTAAACAG
CAATATGCTCAAAGGTCCCGCGTTCGGAAGCTTCAATATATTGCAGAGCTTGAGAGAAAA
GTTCAGGCATTACAGTCAGAAGGGATAGATGTGTCTGCTGAAATGGAGTTTCTTAGCCAA
CAGAATATTATGCTTGACTTGGAAAACAAAGCCTTAAAGCAAAGGCTGGAAAGTCTAGCT
CAAGAGCAACTAATTAAACGCTTTCAACAGGAGATGTTTGAGCGGGAAATTGGTCGTCTC
AGATCATTGTACCAGCAGCAGCAGCAGCAACAGAAGCAGCCGCAACCTACTACTACCCTC
AGTCGAAGTAACAGCAGAGACCTGGATTCACAGTTTGCTAATCTGTCTCTGAAACACAAA
GACCCCAACTCTGGGCCTCTTCGTACTCAGTCCTCGTCAATCTTGTGAGTTCCACACAAA
GTTGCCACAACTCCTAGATAACTCTTTGTGGCTGTCATCTGCATCAAGAAAGGAGCAGGC
GCACCTGGAATCGTGTACCCCCATCTATGGTGAATAATAACACTGGAAAGGCTAATAACT
GTGGATCTGATCTTTATTCTTTTGGAATATGCACCTGGCGGTCATCCTCAGCTCACTTCC
ATTGTTGATGCTCGACCAGTCGGAGGTGTTTAGGGTTTTTCTTTGTAGTTTGATGCTTTT
ATTATCGCATCGTTGTACCATTTTCGAAATGCTAGGGTTCTAATTTGTTACCGTCCTGTT
CCCTGTGATCATGCATTATGTTAGCGATATTTGGATTAGTCTTGCCTTTATCAATGGAAT
GTGGAGCACTAGTCAGCATCTGGTACATACAGATGTTTTGAAATTGTGCCACATCCTTGA
GAAACCGTATGTGTTGTAACATTGTTATTCAATAAGCTAGTGCAAATGAAGTATTAGCGT
TGTTCAGTGTTCCAAAAAAAAAAA

consensusID : consensus_12694#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 517
fasta sequence

                              [GCGCCGCACCACAGGCACGGGCACGGCACGGGCACCACCAGCGCACGTCGTCGGAGAGCTTCATCGACGACCTGCTCAACGAGCCCGAGACGCCGGTGCGGCAGCACGGCCGGGCCGGCCACCGCCGGTCGTCGAGTGACTCGTTTGCGATGTTCGACGGAGGCGCCGCCGCCGGCGCTTACGCCAATGGCTTTGAAGGGATGGGAGGAGGAGGAGGAGGAGGGCAGGCCGCGCCGTGGGGTGGTGTGCAGGAGTACTATGCGAAGCCAAGCTCGTTTGGTAGGCACCAGGGCCGGCCATGGGAGCAGGGCATGAACAATTTGGTGAATTACAGGCAAAGCGGCGGTCCACCGATGCCGGCGAAGGAGAAGGTTGGTGGGCACCATGGGTCGCCGAGCGTGTTGAGGGATCATGATCATGGTATGGACAGGAGATCCTCGGACGAATCGGGGCATGATCAGAAGGTTGGGCCTGAGAGGAAGGAGGGCGTGCCGCCGAAGCATGCACAATCCGAGGC]

[+] EMBL BU667261             [GCGCCGCACCACAGGCACGGGCACGGCACGGGCACCACCAGCGCACGTCGTCGGAGAGCTTCATCGACGACCTGCTCAACGAGCCCGAGACGCCGGTGCGGCAGCACGGCCGGGCCGGCCACCGCCGGTCGTCGAGTGACTCGTTTGCGATGTTCGACGGAGGCGCCGCCGCCGGCGCTTACGCCAATGGCTTTGAAGGGATGGGAGGAGGAGGAGGAGGAGGGCAGGCCGCGCCGTGGGGTGGTGTGCAGGAGTACTATGCGAAGCCAAGCTCGTTTGGTAGGCACCAGGGCCGGCCATGGGAGCAGGGCATGAACAATTTGGTGAATTACAGGCAAAGCGGCGGTCCACCGATGCCGGCGAAGGAGAAGGTTGGTGGGCACCATGGGTCGCCGAGCGTGTTGAGGGATCATGATCATGGTATGGACAGGAGATCCTCGGACGAATCGGGGCATGATCAGAAGGTTGGGCCTGAGAGGAAGGAGGGCGTGCCGCCGAAGCATGCACAATCCGAGGC]




>consensus_12694#1
GCGCCGCACCACAGGCACGGGCACGGCACGGGCACCACCAGCGCACGTCGTCGGAGAGCT
TCATCGACGACCTGCTCAACGAGCCCGAGACGCCGGTGCGGCAGCACGGCCGGGCCGGCC
ACCGCCGGTCGTCGAGTGACTCGTTTGCGATGTTCGACGGAGGCGCCGCCGCCGGCGCTT
ACGCCAATGGCTTTGAAGGGATGGGAGGAGGAGGAGGAGGAGGGCAGGCCGCGCCGTGGG
GTGGTGTGCAGGAGTACTATGCGAAGCCAAGCTCGTTTGGTAGGCACCAGGGCCGGCCAT
GGGAGCAGGGCATGAACAATTTGGTGAATTACAGGCAAAGCGGCGGTCCACCGATGCCGG
CGAAGGAGAAGGTTGGTGGGCACCATGGGTCGCCGAGCGTGTTGAGGGATCATGATCATG
GTATGGACAGGAGATCCTCGGACGAATCGGGGCATGATCAGAAGGTTGGGCCTGAGAGGA
AGGAGGGCGTGCCGCCGAAGCATGCACAATCCGAGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12694#0      CGATTCTCCCTTCTCTCCACGATTTCTCCATTCTTCTTCTTCTCCTCCTCTCCACTACTC 60
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      TATCCTCTTCTTCTTCTTCGTAGCCTTCGAGCTCGAGCTCCTCCATAGATTAGCTTGGCT 120
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      ACCACCGGAGAAGAGTCCGGGGAGTCGGAAACTCGTAGCTGGGGTTCGTTGCGGCGGTCG 180
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      GGGCGGCCGAATTGATTGGTTGGGTCGGAGCGGATGATGATGGCGAACGCGAAGCTGCCC 240
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      AAGCAGGCGCTGCTGCCGCCGCGCAGCCCGTTCCCGACGGCGGCGGCGGCGGCGGGGCCG 300
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      TACGCCGGCGACCACGGCCCGATCGCGCGGCCGCAGGGTGCGCCGCACCACAGGCACGGG 360
consensus_12694#1      ---------------------------------------GCGCCGCACCACAGGCACGGG 21
                                                              *********************

consensus_12694#0      CACGGCCACGGGCACCACCAGCGCACGTCGTCGGAGAGCTTCATCGAGGAGCAGCCGTCG 420
consensus_12694#1      CACGGC-ACGGGCACCACCAGCGCACGTCGTCGGAGAGCTTCATCG-------------- 66
                       ****** ***************************************              

consensus_12694#0      TGGCTCGACGACCTGCTCAACGAGCCCGAGACGCCGGTGCGGCAGCACGGCCGGGCCGGC 480
consensus_12694#1      -------ACGACCTGCTCAACGAGCCCGAGACGCCGGTGCGGCAGCACGGCCGGGCCGGC 119
                              *****************************************************

consensus_12694#0      CACCGCCGGTCGTCGAGTGACTCGTTTGCGATGTTCGACGGAGGCGCCGCCGCCGGCGCT 540
consensus_12694#1      CACCGCCGGTCGTCGAGTGACTCGTTTGCGATGTTCGACGGAGGCGCCGCCGCCGGCGCT 179
                       ************************************************************

consensus_12694#0      TACGCCAATGGCTTTGAAGGGATGGGAGGAGGAGGAGGAGGAGGGCAGGCCGCGCCGTGG 600
consensus_12694#1      TACGCCAATGGCTTTGAAGGGATGGGAGGAGGAGGAGGAGGAGGGCAGGCCGCGCCGTGG 239
                       ************************************************************

consensus_12694#0      GGTGGTGTGCAGGAGTACTATGCGAAGCCAAGCTCGTTTGGTAGGCACCAGGGCCGGCCA 660
consensus_12694#1      GGTGGTGTGCAGGAGTACTATGCGAAGCCAAGCTCGTTTGGTAGGCACCAGGGCCGGCCA 299
                       ************************************************************

consensus_12694#0      TGGGAGCAGGGCATGAACAATTTGGTGAATTACAGGCAAAGCGGCGGTCCACCGATGCCG 720
consensus_12694#1      TGGGAGCAGGGCATGAACAATTTGGTGAATTACAGGCAAAGCGGCGGTCCACCGATGCCG 359
                       ************************************************************

consensus_12694#0      GCGAAGGAGAAGGTTGGTGGGCACCATGGGTCGCCGAGCGTGTTGAGGGATCATGATCAT 780
consensus_12694#1      GCGAAGGAGAAGGTTGGTGGGCACCATGGGTCGCCGAGCGTGTTGAGGGATCATGATCAT 419
                       ************************************************************

consensus_12694#0      GGTATGGACAGGAGATCCTCGGACGAATCGGGGCATGATCAGAAGGTTGGGCCTGAGAGG 840
consensus_12694#1      GGTATGGACAGGAGATCCTCGGACGAATCGGGGCATGATCAGAAGGTTGGGCCTGAGAGG 479
                       ************************************************************

consensus_12694#0      AAGGAGGGCGTGCCGCCGAAGCATGCACAATCCGAGGCGGACACCAAGCGCGCTAAACAG 900
consensus_12694#1      AAGGAGGGCGTGCCGCCGAAGCATGCACAATCCGAGGC---------------------- 517
                       **************************************                      

consensus_12694#0      CAATATGCTCAAAGGTCCCGCGTTCGGAAGCTTCAATATATTGCAGAGCTTGAGAGAAAA 960
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      GTTCAGGCATTACAGTCAGAAGGGATAGATGTGTCTGCTGAAATGGAGTTTCTTAGCCAA 1020
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      CAGAATATTATGCTTGACTTGGAAAACAAAGCCTTAAAGCAAAGGCTGGAAAGTCTAGCT 1080
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      CAAGAGCAACTAATTAAACGCTTTCAACAGGAGATGTTTGAGCGGGAAATTGGTCGTCTC 1140
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      AGATCATTGTACCAGCAGCAGCAGCAGCAACAGAAGCAGCCGCAACCTACTACTACCCTC 1200
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      AGTCGAAGTAACAGCAGAGACCTGGATTCACAGTTTGCTAATCTGTCTCTGAAACACAAA 1260
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      GACCCCAACTCTGGGCCTCTTCGTACTCAGTCCTCGTCAATCTTGTGAGTTCCACACAAA 1320
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      GTTGCCACAACTCCTAGATAACTCTTTGTGGCTGTCATCTGCATCAAGAAAGGAGCAGGC 1380
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      GCACCTGGAATCGTGTACCCCCATCTATGGTGAATAATAACACTGGAAAGGCTAATAACT 1440
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      GTGGATCTGATCTTTATTCTTTTGGAATATGCACCTGGCGGTCATCCTCAGCTCACTTCC 1500
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      ATTGTTGATGCTCGACCAGTCGGAGGTGTTTAGGGTTTTTCTTTGTAGTTTGATGCTTTT 1560
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      ATTATCGCATCGTTGTACCATTTTCGAAATGCTAGGGTTCTAATTTGTTACCGTCCTGTT 1620
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      CCCTGTGATCATGCATTATGTTAGCGATATTTGGATTAGTCTTGCCTTTATCAATGGAAT 1680
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      GTGGAGCACTAGTCAGCATCTGGTACATACAGATGTTTTGAAATTGTGCCACATCCTTGA 1740
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      GAAACCGTATGTGTTGTAACATTGTTATTCAATAAGCTAGTGCAAATGAAGTATTAGCGT 1800
consensus_12694#1      ------------------------------------------------------------
                                                                                   

consensus_12694#0      TGTTCAGTGTTCCAAAAAAAAAAA 1824
consensus_12694#1      ------------------------