These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12739#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1538 fasta sequence [AGGGGAGGAGCGGCGATCTCGTCGGCGACGACGACGTCGAGGTCGAGGCGGTGGCGGAGGAGCATGGCCGACGGTCAGGAGGACGCCGCGGGTCTGGACGATGACCTTGTTCTCGAGGATGAGCTGCGAGGTCGAGAAGAGGGCGAAGACGGCGGCGGCGGCGGCGGCGAGGAAGAGGAGGAGGACGACGTCGACGGCCTC-GCCAGCTTCCTCGAATC-GGAGATCCTCTCTGGATCTAG-CGGCGACGACCCTA-CCGGTCGGGAGGAAGGGGATGAGAAGGAGAAGCAG-TT-AGGAGATGATGCGAAG-AACAATAAGAGGAAGCAGGAGTCTGAATCTGATGGGGATA-GCGGCAGCGGGGAGGAGCA-GAACAAGAGGGTGAGGAGAGCA-AAGGGGAAAGAGAAGGACGTGGCGTCG-GTGGCGCCTC-AGATCGAT-AGCGGCATGTT-CTGCA-ATATCCCGCCGGAGT-TGTTCTTGCAGATATTCAAGTTCCTCTCATCGGAGGATCTCATCTCCTGCGCCCTCGTCTGCCGCTTCATGAACGTGGTTGCGTCCGACGAGACCCTCTGGCGCCGCCTGTATTGTATGCGGTGGGGCCTGTCATGCAATACCAAACTCAGGGAGTGCGCTTGGAAGAAACTCTACATCCAGCAAGATAGAGAGGATATGGTTGAGTTTGTGAGAAATACACCTACAGAATTCAAGGAGTATTATATCCAGATGCAGGCTTCAAAAAGGAGTCAAGCTCCCCTTCCCTCTGAAGTCAACGATGACAAGGTTATTCTTGATAAAACAATAGCCGATCAGGTGTCTAGCTGGAAAAGCAGCAGAGGCCTCACTGATGATGCGGTCAAGGGGCATTCTTGTTCTGGGAATACATGCTCTTACACCCAGATTGGTGATGCTTATATTTGTGAGAAGACAGGCCGTGTTCATGTTTGCGATGACGCTTGTCGTGAAT-TTGTCTTGGACCAGTCTAGTGGGCTGCTGCTTTGTACAATATCTGGGCACTGCTTTGAAAGGTGGTTGTGTCCTGATGATGAGTGGGATGCTGATGATGATACTGATCTACAACAAGCTGGTATGACCGATGAAGCAGAGCCATTTATGGGTTCTGGACGATTTGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCA-AGTTTTTGGTTTGCAAGGGAAATTATGGTCAGAAGGCTTGGTGCTATGTT--TTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCTATGTGTACAACTCACGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTTGAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAGAAACCTTCTGTAATGCTCACTGTATTTGTTTTTGCGCTGTATTTGTATCGTTATGTTCTAATTGATGTCCAGCTTGCAAAGCATCAAGTTTTTAGTGT] [+] EMBL AK059732 [AGGGGAGGAGCGGCGATCTCGTCGGCGACGACGACGTCGAGGTCGAGGCGGTGGCGGAGGAGCATGGCCGACGGTCAGGAGGACGCCGCGGGTCTGGACGATGACCTTGTTCTCGAGGATGAGCTGCGAGGTCGAGAAGAGGGCGAAGACGGCGGCGGCGGCGGCGGCGAGGAAGAGGAGGAGGACGACGTCGACGGCCTC GCCAGCTTCCTCGAATC GGAGATCCTCTCTGGATCTAG CGGCGACGACCCTA CCGGTCGGGAGGAAGGGGATGAGAAGGAGAAGCAG TT AGGAGATGATGCGAAG AACAATAAGAGGAAGCAGGAGTCTGAATCTGATGGGGATA GCGGCAGCGGGGAGGAGCA GAACAAGAGGGTGAGGAGAGCA AAGGGGAAAGAGAAGGACGTGGCGTCG GTGGCGCCTC AGATCGAT AGCGGCATGTT CTGCA ATATCCCGCCGGAGT TGTTCTTGCAGATATTCAAGTTCCTCTCATCGGAGGATCTCATCTCCTGCGCCCTCGTCTGCCGCTTCATGAACGTGGTTGCGTCCGACGAGACCCTCTGGCGCCGCCTGTATTGTATGCGGTGGGGCCTGTCATGCAATACCAAACTCAGGGAGTGCGCTTGGAAGAAACTCTACATCCAGCAAGATAGAGAGGATATGGTTGAGTTTGTGAGAAATACACCTACAGAATTCAAGGAGTATTATATCCAGATGCAGGCTTCAAAAAGGAGTCAAGCTCCCCTTCCCTCTGAAGTCAACGATGACAAGGTTATTCTTGATAAAACAATAGCCGATCAGGTGTCTAGCTGGAAAAGCAGCAGAGGCCTCACTGATGATGCGGTCAAGGGGCATTCTTGTTCTGGGAATACATGCTCTTACACCCAGATTGGTGATGCTTATATTTGTGAGAAGACAGGCCGTGTTCATGTTTGCGATGACGCTTGTCGTGAAT TTGTCTTGGACCAGTCTAGTGGGCTGCTGCTTTGTACAATATCTGGGCACTGCTTTGAAAGGTGGTTGTGTCCTGATGATGAGTGGGATGCTGATGATGATACTGATCTACAACAAGCTGGTATGACCGATGAAGCAGAGCCATTTATGGGTTCTGGACGATTTGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCA AGTTTTTGGTTTGCAAGGGAAATTATGGTCAGAAGGCTTGGTGCTATGTT TTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCTATGTGTACAACTCACGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTTGA ] [+] EMBL AK103683 [ CGTCGGCGACGACGACGTCGAGGTCGAGGCGGTGGCGGAGGAGCATGGCCGACGGTCAGGAGGACGCCGCGGGTCTGGACGATGACCTTGTTCTCGAGGATGAGCTGCGAGGTCGAGAAGAGGGCGAAGACGGCGGCGGCGGCGGCGGCGAGGAAGAGGAGGAGGACGACGTCGACGGCCTC GCCAGCTTCCTCGAATC GGAGATCCTCTCTGGATCTAG CGGCGACGACCCTA CCGGTCGGGAGGAAGGGGATGAGAAGGAGAAGCAG TT AGGAGATGATGCGAAG AACAATAAGAGGAAGCAGGAGTCTGAATCTGATGGGGATA GCGGCAGCGGGGAGGAGCA GAACAAGAGGGTGAGGAGAGCA AAGGGGAAAGAGAAGGACGTGGCGTCG GTGGCGCCTC AGATCGAT AGCGGCATGTT CTGCA ATATCCCGCCGGAGT TGTTCTTGCAGATATTCAAGTTCCTCTCATCGGAGGATCTCATCTCCTGCGCCCTCGTCTGCCGCTTCATGAACGTGGTTGCGTCCGACGAGACCCTCTGGCGCCGCCTGTATTGTATGCGGTGGGGCCTGTCATGCAATACCAAACTCAGGGAGTGCGCTTGGAAGAAACTCTACATCCAGCAAGATAGAGAGGATATGGTTGAGTTTGTGAGAAATACACCTACAGAATTCAAGGAGTATTATATCCAGATGCAGGCTTCAAAAAGGAGTCAAGCTCCCCTTCCCTCTGAAGTCAACGATGACAAGGTTATTCTTGATAAAACAATAGCCGATCAGGTGTCTAGCTGGAAAAGCAGCAGAGGCCTCACTGGTGATGCGGTCAAGGGGCATTCTTGTTCTGGGAATACATGCTCTTACACCCAGATTGGTGATGCTTATATTTGTGAGAAGACAGGCCGTGTTCATGTTTGCGATGACGCTTGTCGTGAAT TTGTCTTGGACCAGTCTAGTGGGCTGCTGCTTTGTACAATATCTGGGCACTGCTTTGAAAGGTGGTTGTGTCCTGATGATGAGTGGGATGCTGATGATGATACTGATCTACAACAAGCTGGTATGACCGATGAAGCAGAGCCATTTATGGGTTCTGGACGATTTGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCA AGTTTTTGGTTTGCAAGGGAAATTATGGTCAGAAGGCTT ] [+] EMBL AK070881 [ CGAGGTCGAGAAGAGGGCGAAGACGGCGGCGGCGGCGGCGGCGAGGAAGAGGAGGAGGACGACGTCGACGGCCTC GCCAGCTTCCTCGAATC GGAGATCCTCTCTGGATCTAG CGGCGACGACCCTA CCGGTCGGGAGGAAGGGGATGAGAAGGAGAAGCAG TT AGGAGATGATGCGAAG AACAATAAGAGGAAGCAGGAGTCTGAATCTGATGGGGATA GCGGCAGCGGGGAGGAGCA GAACAAGAGGGTGAGGAGAGCA AAGGGGAAAGAGAAGGACGTGGCGTCG GTGGCGCCTC AGATCGAT AGCGGCATGTT CTGCA ATATCCCGCCGGAGT TGTTCTTGCAGATATTCAAGTTCCTCTCATCGGAGGATCTCATCTCCTGCGCCCTCGTCTGCCGCTTCATGAACGTGGTTGCGTCCGACGAGACCCTCTGGCGCCGCCTGTATTGTAAGCGGTGGGGCCTGTCATGCAATACCAAACTCAGGGAGTGCGCTTGGAAGAAACTCTACATCCAGCAAGATAGAGAGGATATGGTTGAGTTTGTGAGAAATACACCTACAGAATTCAAGGAGTATTATATCCAGATGCAGGCTTCAAAAAGGAGTCAAGCTCCCCTTCCCTCTGAAGTCAACGATGACAAGGTTATTCTTGATAAAACAATAGCCGATCAGGTGTCTAGCTGGAAAAGCAGCAGAGGCCTCACTGATGATGCGGTCAAGGGGCATTCTTGTTCTGGGAATACATGCTCTTACACCCAGATTGGTGATGCTTATATTTGTGAGAAGACAGGCCGTGTTCATGTTTGCGATGACGCTTGTCGTGAAT TTGTCTTGGACCAGTCTAGTGGGCTGCTGCTTTGTACAATATCTGGGCACTGCTTTGAAAGGTGGTTGTGTCCTGATGATGAGTGGGATGCTGATGATGATACTGATCTACAACAAGCTGGTATGACCGATGAAGCAGAGCCATTTATGGGTTCTGGACGATTTGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATGACTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCA AGTTTTTGGTTTGCAAGGGAAATTATGGTCAGAAGGCTTGGTGCTATGTTTATTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCTATGTGTACAACTCACGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTTGAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAGAAACCTTCTGTAATGCTCACTGTATTTGTTTTTGCGCTGTATTTGTATCGTTATGTTCTAATTGATGTCCAGCTTGCAAAGCATCAAGTTTTTAGTGT] [+] EMBL CF312145 [ GCCTC GCCAGCTTCCTCGAATC GGAGATCCTCTCTGGATCTAG CGGCGACGACCCTA CCGGTCGGGAGGAAGGGGATGAGAAGGAGAAGCAG TT AGGAGATGATGCGAAG AACAATAAGAGGAAGCAGGAGTCTGAATCTGATGGGGATA GCGGCAGCGGGGAGGAGCA GAACAAGAGGGTGAGGAGAGCA AAGGGGAAAGAGAAGGACGTGGCGTCG GTGGCGCCTC AGATCGAT AGCGGCATGTT CTGCA ATATCCCGCCGGAGT TGTTCTTGCAGATATTCAAGTTCCTCTCATCGGAGGATCTCATCTCCTGCGCCCTCGTCTGCCGCTTCATGAACGTGGTTGCGTCCGACGAGACCCTCTGGCGCCGCCTGTATTGTATGCGGTGGGGCCTGTCATGCAATACCAAACTCAGGGAGTGCGCTTGGAAGAAACTCTACATCCAGCAAGATAGAGAGGATATGGTTGAGTTTGTGAGAAATACACCTACAGAATTCAAGGAGTATTATA ] [+] EMBL AU225747 [ GCCGCTGCCAGCTTCCTCGAATCAGGAGATCCTCTCTGGATCTAGACGGCGACGACCCTAGCCGGTCGGGAGGAAGGGGATGAGAAGGAGAAGCAGATTGAGGAGATGATGCGAAGTAACAATAAGAGGAAGCAGGAGTCTGAATCTGATGGGGATAGGCGGCAGCGGGGAGGAGCAGGAACAAGAGGGTGAGGAGAGCAGAAGGGGAAAGAGAAGGACGTGGCGTCGTGTGGCGCCTCTAGATCGATAAGCGGCATGTTGCTGCATATATCCCGCCGGAGTCTGTTCTAGCAGATATTCAAGTGCCTCTCATCGGAGGATCTCATCTCCTGCGCCCTCGTCTGCCGCATCATGAACGTGGTTGCGTACGACGAGACCCTCTGGCGCCGCCTGTATag ] [+] EMBL BM420015 [ gGCGATGACGCTTGTCGTGAATGTTGTCTTGGACCAGTCTAGTGGGCTGCTGCTTTGTACAATATCTGGGCACTGCTTTGAAAGGTGGTTGTGTCCTGATGATGAGTGGGATGCTGATGATGATACTGATCTACAACAAGCTGGTATGACCGATGAAGCAGAGCCATTTATGGGTTCTGGACGATTTGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCACAGTTTTTGGTTGGCAAGGGAAATTATGGTCAGAAGGCTTGGTGCTATG T TTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCTATGTGTACAACTCACGCACAAATATGAGACGGCTAAATTTCTGATCTGTTTGGATCA TTGAGGAACCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAGAAACCTTCTGTAAaaaaaaaa ] consensusID : consensus_12739#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 521 fasta sequence [TTAACCTCAGACCAATACCTTTTGTATGCACATCTTCCTTTTGTTTGTACTTTTATATTATTGGATCCCATAGTAGTGTGTGGTCCCTGTACCATCGGTGATTTTAGCTGTGTTTAGAATGCATAAGTCGTTTGTTTCATTACCTTGAATTACTGACTTGTGCTCTGATTCTGAACAGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATCCCTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCCAGTTTTTGGTTGGCAAGGGAAATTATGGTCAGAAGGCTTGGTGCTATGTTTTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCTATGTGTACAACTCACGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTTGAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACCAGGTGCATGCTAGTAATAAAAGAAACCTTCTGTAATGCTCAAAAA] [+] EMBL BI812010 [TTAACCTCAGACCAATACCTTTTGTATGCACATCTTCCTTTTGTTTGTACTTTTATATTATTGGATCCCATAGTAGTGTGTGGTCCCTGTACCATCGGTGATTTTAGCTGTGTTTAGAATGCATAAGTCGTTTGTTTCATTACCTTGAATTACTGACTTGTGCTCTGATTCTGAACAGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATCCCTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCCAGTTTTTGGTTGGCAAGGGAAATTATGGTCAGAAGGCTTGGTGCTATGTTTTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCTATGTGTACAACTCACGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTTGAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACCAGGTGCATGCTAGTAATAAAAGAAACCTTCTGTAATGCTCAAAAA] consensusID : consensus_12739#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 504 fasta sequence [ATGCACATCTTCCGTTTTGTTTGTACTTTTATATTATTGGATTCCAATAGTAGTGTGTGGTGCCACTGTACCAATCGGTGATTGTAGGCTGTGTTTAGAATGCATAAGTCGTTTGTTTCATTACATTGAATTACTGACTTGTGCTCTGATTCTGAACAGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCAAGTTTTTGGTTTGCAAGGGAAATTATGGTCAGAAGGCTTGGTGCTATGTTTTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCTATGTGTACAACTCACGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTTGAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAGAAACCTTCTGTAAAAAAAAAAAAAA] [+] EMBL CF314152 [ATGCACATCTTCCGTTTTGTTTGTACTTTTATATTATTGGATTCCAATAGTAGTGTGTGGTGCCACTGTACCAATCGGTGATTGTAGGCTGTGTTTAGAATGCATAAGTCGTTTGTTTCATTACATTGAATTACTGACTTGTGCTCTGATTCTGAACAGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCAAGTTTTTGGTTTGCAAGGGAAATTATGGTCAGAAGGCTTGGTGCTATGTTTTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCTATGTGTACAACTCACGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTTGAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAGAAACCTTCTGTAAAAAAAAAAAAAA] [+] EMBL CF328975 [ CGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTCGATCAGTTGAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAa ] consensusID : consensus_12739#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 491 fasta sequence [TGCTTTGTACAATATTTGGGCACTGCTTTGAAAGGTGGTTGTGTCCTGATGATGAGTGGGATGCTGATGGTGATACTGATCTACAACAAGCTGGTATGACCGATGAAGCAGAGCCATTTATGGGTTTTGGACGATTTGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCAAGTTTTTGGTTTGCAAGGGAAATTATGGTCAGAAGGCTTGGGGCTATGTTTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCTATGTGTACAACTCACGCCCAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTTGAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAGAAACCTTCTGTAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF312146 [TGCTTTGTACAATATTTGGGCACTGCTTTGAAAGGTGGTTGTGTCCTGATGATGAGTGGGATGCTGATGGTGATACTGATCTACAACAAGCTGGTATGACCGATGAAGCAGAGCCATTTATGGGTTTTGGACGATTTGCACGCGCATATCAGTTGGGTTACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGATTGCCTAATCATACTGGCAACATGAAACCAAGTTTTTGGTTTGCAAGGGAAATTATGGTCAGAAGGCTTGGGGCTATGTTTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCTATGTGTACAACTCACGCCCAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTTGAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAGAAACCTTCTGTAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_12739#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 434 fasta sequence [ATAAGTCGTTTGTTTCATTACATTGAATTACTGACTTGGGGTTTGATTTTGAACAGCACGGGCAAATCAGTTGGGTTACAACTGTGCTGATTAAAAGGAACTTGAAAAAGCCCTGAGGTTTTGGTGAAAATTGGGATTGCCTAATCAAACTGGCAACATGAAACCAAGTTTTTGGTTTGCAAGGGAAATTATGGTCAAAAGGGTTGGGGCTATGTTTTTTTTTTTTTTACCTAGTTTAGGTTTTTGGGATGTTCCTATGGGGACAACTCACGCCCAAATATGAGACGGGTAAAATTTTGATTTGTTTTGATCAGTTGAGGAAACTGTAAATTGTTGTAATTTTCCTAAATTACAAGGGGCATGGTAGTAATAAAAAAAACCTTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAA] [-] EMBL CF314151 [ATAAGTCGTTTGTTTCATTACATTGAATTACTGACTTGGGGTTTGATTTTGAACAGCACGGGCAAATCAGTTGGGTTACAACTGTGCTGATTAAAAGGAACTTGAAAAAGCCCTGAGGTTTTGGTGAAAATTGGGATTGCCTAATCAAACTGGCAACATGAAACCAAGTTTTTGGTTTGCAAGGGAAATTATGGTCAAAAGGGTTGGGGCTATGTTTTTTTTTTTTTTACCTAGTTTAGGTTTTTGGGATGTTCCTATGGGGACAACTCACGCCCAAATATGAGACGGGTAAAATTTTGATTTGTTTTGATCAGTTGAGGAAACTGTAAATTGTTGTAATTTTCCTAAATTACAAGGGGCATGGTAGTAATAAAAAAAACCTTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 AGGGGAGGAGCGGCGATCTCGTCGGCGACGACGACGTCGAGGTCGAGGCGGTGGCGGAGG 60 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 AGCATGGCCGACGGTCAGGAGGACGCCGCGGGTCTGGACGATGACCTTGTTCTCGAGGAT 120 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 GAGCTGCGAGGTCGAGAAGAGGGCGAAGACGGCGGCGGCGGCGGCGGCGAGGAAGAGGAG 180 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 GAGGACGACGTCGACGGCCTCGCCAGCTTCCTCGAATCGGAGATCCTCTCTGGATCTAGC 240 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 GGCGACGACCCTACCGGTCGGGAGGAAGGGGATGAGAAGGAGAAGCAGTTAGGAGATGAT 300 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 GCGAAGAACAATAAGAGGAAGCAGGAGTCTGAATCTGATGGGGATAGCGGCAGCGGGGAG 360 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 GAGCAGAACAAGAGGGTGAGGAGAGCAAAGGGGAAAGAGAAGGACGTGGCGTCGGTGGCG 420 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 CCTCAGATCGATAGCGGCATGTTCTGCAATATCCCGCCGGAGTTGTTCTTGCAGATATTC 480 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 AAGTTCCTCTCATCGGAGGATCTCATCTCCTGCGCCCTCGTCTGCCGCTTCATGAACGTG 540 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 GTTGCGTCCGACGAGACCCTCTGGCGCCGCCTGTATTGTATGCGGTGGGGCCTGTCATGC 600 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 AATACCAAACTCAGGGAGTGCGCTTGGAAGAAACTCTACATCCAGCAAGATAGAGAGGAT 660 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 ATGGTTGAGTTTGTGAGAAATACACCTACAGAATTCAAGGAGTATTATATCCAGATGCAG 720 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 GCTTCAAAAAGGAGTCAAGCTCCCCTTCCCTCTGAAGTCAACGATGACAAGGTTATTCTT 780 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 GATAAAACAATAGCCGATCAGGTGTCTAGCTGGAAAAGCAGCAGAGGCCTCACTGATGAT 840 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ------------------------------------------------------------ consensus_12739#2 ------------------------------------------------------------ consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 GCGGTCAAGGGGCATTCTTGTTCTGGGAATACATGCTCTTACACCCAGATTGGTGATGCT 900 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 ----------------------------------TTAACCTCAGACCAATACCTTTTGTA 26 consensus_12739#2 -----------------------------------------------------------A 1 consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 TATATTTGTGAGAAGACAGGCCGTGTTCATGTTTGCGATGACGCTTGTCGTGAATTTGTC 960 consensus_12739#3 ------------------------------------------------------------ consensus_12739#1 TGCACATCTTCC-TTTTGTTTGTACTTT-TATATTATTGGATCCCA-TAGTAGTGTGTGG 83 consensus_12739#2 TGCACATCTTCCGTTTTGTTTGTACTTT-TATATTATTGGATTCCAATAGTAGTGTGTGG 60 consensus_12739#4 ------------------------------------------------------------ consensus_12739#0 TTGGACCAGTCTAGTGGGCTGCTGCTTTGTACAATATCTGGGCACTGCTTTGAAAGGTGG 1020 consensus_12739#3 ----------------------TGCTTTGTACAATATTTGGGCACTGCTTTGAAAGGTGG 38 consensus_12739#1 TCCC--TGTACCA-TCGGTGAT-TTTAG-CTGTGTTTAGAATGCATAAGTCGTTTGTTTC 138 consensus_12739#2 TGCCACTGTACCAATCGGTGAT-TGTAGGCTGTGTTTAGAATGCATAAGTCGTTTGTTTC 119 consensus_12739#4 --------------------------------------------ATAAGTCGTTTGTTTC 16 consensus_12739#0 TTGTGTCCTGATGATGAGTGGGATGCTGATGATGATACTGATCTACAACAAGCTGGTATG 1080 consensus_12739#3 TTGTGTCCTGATGATGAGTGGGATGCTGATGGTGATACTGATCTACAACAAGCTGGTATG 98 * ** * * ** * consensus_12739#1 ATTACCTTGAATTACTGACTTGTGCTCTGATTCTGAACAGCACGCGCATATCAGTTGGGT 198 consensus_12739#2 ATTACATTGAATTACTGACTTGTGCTCTGATTCTGAACAGCACGCGCATATCAGTTGGGT 179 consensus_12739#4 ATTACATTGAATTACTGACTTGGGGTTTGATTTTGAACAGCACGGGCAAATCAGTTGGGT 76 consensus_12739#0 ACCGATGAAGCAGAGCCATTTATGGGTTCTGGACGATTTGCACGCGCATATCAGTTGGGT 1140 consensus_12739#3 ACCGATGAAGCAGAGCCATTTATGGGTTTTGGACGATTTGCACGCGCATATCAGTTGGGT 158 * * * ** * * ** ***** *** *********** consensus_12739#1 TACAGCTGTGCTGATGAGAAGGAACTTGAATATCCCTTGAGGTTTTGCTGATAATTGGGA 258 consensus_12739#2 TACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGA 239 consensus_12739#4 TACAACTGTGCTGATTAAAAGGAACTTGAAAAAGCCCTGAGGTTTTGGTGAAAATTGGGA 136 consensus_12739#0 TACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGA 1200 consensus_12739#3 TACAGCTGTGCTGATGAGAAGGAACTTGAATATGCCTTGAGGTTTTGCTGATAATTGGGA 218 **** ********** * ************ * ** ********** *** ******** consensus_12739#1 TTGCCTAATCATACTGGCAACATGAAACCCAGTTTTTGGTTGGCAAGGGAAATTATGGTC 318 consensus_12739#2 TTGCCTAATCATACTGGCAACATGAAACCAAGTTTTTGGTTTGCAAGGGAAATTATGGTC 299 consensus_12739#4 TTGCCTAATCAAACTGGCAACATGAAACCAAGTTTTTGGTTTGCAAGGGAAATTATGGTC 196 consensus_12739#0 TTGCCTAATCATACTGGCAACATGAAACCAAGTTTTTGGTTTGCAAGGGAAATTATGGTC 1260 consensus_12739#3 TTGCCTAATCATACTGGCAACATGAAACCAAGTTTTTGGTTTGCAAGGGAAATTATGGTC 278 *********** ***************** *********** ****************** consensus_12739#1 AGAAGGCTTGGTGCTATGTTTTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCT 378 consensus_12739#2 AGAAGGCTTGGTGCTATGTTTTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCT 359 consensus_12739#4 AAAAGGGTTGGGGCTATGTTTTTTTTTTTTTTACCTAGTTTAGGTTTTTGGGATGTTCCT 256 consensus_12739#0 AGAAGGCTTGGTGCTATGTTTTTTTTTTTTTTACCTAGTTTAGGTTTCTGGTATGTTCCT 1320 consensus_12739#3 AGAAGGCTTGGGGCTATGTTTTTTTTTTTTT-ACCTAGTTTAGGTTTCTGGTATGTTCCT 337 * **** **** ******************* *************** *** ******** consensus_12739#1 ATGTGTACAACTCACGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTT 438 consensus_12739#2 ATGTGTACAACTCACGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTT 419 consensus_12739#4 ATGGGGACAACTCACGCCCAAATATGAGACGGGTAAAATTTTGATTTGTTTTGATCAGTT 316 consensus_12739#0 ATGTGTACAACTCACGCACAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTT 1380 consensus_12739#3 ATGTGTACAACTCACGCCCAAATATGAGACGGCTAAAATTCTGATCTGTTTTGATCAGTT 397 *** * *********** ************** ******* **** ************** consensus_12739#1 GAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACCAGGTGCATGCTAGTAATAAAAG 498 consensus_12739#2 GAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAG 479 consensus_12739#4 GAGGAAACTGTAAATTGTTGTAATTTTCCTAAATTACAAGGGGCATGGTAGTAATAAAAA 376 consensus_12739#0 GAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAG 1440 consensus_12739#3 GAGGAAGCTGTATATTGTTGTAATCTTCCTAAATTACAAGGTGCATGCTAGTAATAAAAG 457 ****** ***** *********** ************ *** ***** *********** consensus_12739#1 AAACCTTCTGTAATGCTCAAAAA------------------------------------- 521 consensus_12739#2 AAACCTTCTGTAAAAAAAAAAAAAA----------------------------------- 504 consensus_12739#4 AAACCTTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAA-- 434 consensus_12739#0 AAACCTTCTGTAATGCTCACTGTATTTGTTTTTGCGCTGTATTTGTATCGTTATGTTCTA 1500 consensus_12739#3 AAACCTTCTGTAAAAAAAAAAAAAAAAAAAAAAA-------------------------- 491 ******* ***** * consensus_12739#1 -------------------------------------- consensus_12739#2 -------------------------------------- consensus_12739#4 -------------------------------------- consensus_12739#0 ATTGATGTCCAGCTTGCAAAGCATCAAGTTTTTAGTGT 1538 consensus_12739#3 -------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||