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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12753#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1847 fasta sequence
[TGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGTATCTACAATGTATTGCTGCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTGAACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGACGGATGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATGACTACAGATGAATTTCTAACTTTGTTTGCCTTGCAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAGTACTTGGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGTCCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGACCAACAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTAAGAAAGTTGTCTTGATTTGAGTATGTTTTCTAGCATTTAGAATGTTTAGGTTGGAGCAATTTGGGATATACATCGCCAGAATTTCTACCATCTATAAGTTTAGTTGACTTGAACTTATAAGCTGAATGGATATTGTTATTGAAGGAATGTTATTTTCTGAGAATGCTAATCCATCTAGCCACTTCTTAGCTGGGTACGAGCTTGCAGAACTGCAGCTACCTGTGGCATCCGAGAGAACCAATTTCCATGTTCAAGTTTTCATCTTTTATAAAACGAGGGAACCGTTCCTCAAGTTCCCTTATAAACACCTGAACCTTTTCAGGTAGGAACCAACACATAGATTGTCCAGATAAACTAGTTTATCTTTTTTGTTTCCCTCGAAAAAAGAAAACGAGTTACCCTTTTATCTTTGAACTGTGGTGTTATGATTTCTTCCGAATGCGTGTTGTATGGTGCATGTTTAATTTAGTGACAGTAGAATTTGAATTCCTTTGGTGTGAACATGGATGATGCAGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTTCCTTACAGGAATGTTA]
[+] EMBL AK119615 [TGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGTATCTACAATGTATTGCTGCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTGAACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGACGGATGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATGACTACAGATGAATTTCTAACTTTGTTTGCCTTGCAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAGTACTTGGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGTCCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGACCAACAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTAAGAAAGTTGTCTTGATTTGAGTATGTTTTCTAGCATTTAGAATGTTTAGGTTGGAGCAATTTGGGATATACATCGCCAGAATTTCTACCATCTATAAGTTTAGTTGACTTGAACTTATAAGCTGAATGGATATTGTTATTGAAGGAATGTTATTTTCTGAGAATGCTAATCCATCTAGCCACTTCTTAGCTGGGTACGAGCTTGCAGAACTGCAGCTACCTGTGGCATCCGAGAGAACCAATTTCCATGTTCAAGTTTTCATCTTTTATAAAACGAGGGAACCGTTCCTCAAGTTCCCTTATAAACACCTGAACCTTTTCAGGTAGGAACCAACACATAGATTGTCCAGATAAACTAGTTTATCTTTTTTGTTTCCCTCGAAAAAAGAAAACGAGTTACCCTTTTATCTTTGAACTGTGGTGTTATGATTTCTTCCGAATGCGTGTTGTATGGTGCATGTTTAATTTAGTGACAGTAGAATTTGAATTCCTTTGGTGTGAACATGGATGATGCAGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTTCCTTACAGGAATGTTA]
consensusID : consensus_12753#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1165 fasta sequence
[TGGCGCTANGAGGACCGCGTGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGC-TCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAGTACTT-GGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGT-CCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGACCAA-CAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTT-CTTACAGGAATGTTAATGCCATACCATGGATGTTGTCCTGGCCTTCTAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU101084 [TGGCGCTANGAGGACCGCGTGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCC CCGCGTCGGCGCTTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAA ]
[+] EMBL AK068891 [ CGCGTGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGC TCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAGTACTT GGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGT CCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGACCAA CAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTTCCTTACAGGAATGTTAATGCCATACCATGGATGT ]
[+] EMBL CF325171 [ CGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGC TCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAA ]
[+] EMBL CF325194 [ CGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGC TCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAGTACTT GGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGT CCAGTAGATGCCTTTTGCCTTCTG ]
[+] EMBL AU092585 [ GCAGTACTTGGGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGTCCCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAANCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGACCAA CAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGNCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTT CTTACAGGAATGTTAATGCCATACCATGGATGTTGTCCTGGCCTTCTAAAAAA ]
[+] EMBL AU101085 [ TCTTGATCCATCAGCTGGN CCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGNCCAACCAGTTGGATGGCCGAAAAAATTAGCCCNTGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTACTNGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCNCTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACANCGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACNAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTT CTTACAGGAATGTTAATGCCATACCATGGATGTTGTCCTGGCCAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA999731 [ CGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAAC ]
consensusID : consensus_12753#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 583 fasta sequence
[GGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGTGTCCGCGGGCGTTGCTCCCCTCAAATTTTGTTTTATTTTGCACTGGTTTTGACCCGGGAAATTTTTGGTCATGTTAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGTATCTACAATGTATTGCTGCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTGAACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGACGGANTGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATGACTACAGATGAATTT]
[+] EMBL CF323301 [GGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGTGTCCGCGGGCGTTGCTCCCCTCAAATTTTGTTTTATTTTGCACTGGTTTTGACCCGGGAAATTTTTGGTCATGTTAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGTATCTACAATGTATTGCTGCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTGAACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGACGGANTGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATGACTACAGATGAATTT]
[+] EMBL CF323793 [GGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGTGTCCGCGGGCGTTGCTCCCCTCAAATTTTGTTTTATTTTGCACTGGTTTTGACCCGGGAAATTTTTGGTCATGTTAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGTATCTACAATGTATTGCTGCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTGAACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGACGGA TGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATGACTACAGATGAAT ]
consensusID : consensus_12753#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 438 fasta sequence
[CGGGCGGCGGAGTAGATCGCCGGCGGTNGCGCCCGNTNCGGTCNTNCGNACCCCATGGAGGTCGCTGCTGCAGNAGCGTTGGACGGCAATGCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGACNGGCAGGCGCGANATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTTGACACTTNGGGAACAATTCCGTATTCAGCGGATTCATAGATGTTATTTATGGGTTCAAACCCCGAACCTGTTAAGCTACAACTTGAGAGAGAGANTTTGGTTTTGGAAGCTTAGTNAAATCGGGATTCAGTACTTTGGACATNCCCAGGGTTTCCATT]
[+] EMBL C27615 [CGGGCGGCGGAGTAGATCGCCGGCGGTNGCGCCCGNTNCGGTCNTNCGNACCCCATGGAGGTCGCTGCTGCAGNAGCGTTGGACGGCAATGCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGACNGGCAGGCGCGANATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTTGACACTTNGGGAACAATTCCGTATTCAGCGGATTCATAGATGTTATTTATGGGTTCAAACCCCGAACCTGTTAAGCTACAACTTGAGAGAGAGANTTTGGTTTTGGAAGCTTAGTNAAATCGGGATTCAGTACTTTGGACATNCCCAGGGTTTCCATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12753#1 TGGCGCTANGAGGACCGCGTGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGC 60
consensus_12753#3 -------------------------------------------------------CGGGC 5
consensus_12753#0 -------------------TGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGC 41
consensus_12753#2 -------------------------------GGAGGGGGAGAGGACGAGAGGCGGCGGGC 29
*****
consensus_12753#1 GGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTC 120
consensus_12753#3 GGCGGAGTAGATCGCCGGCGGTNGCGCC--CGNTNCGGTCNTNCGNACCCCATGGAGGTC 63
consensus_12753#0 GGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTC 101
consensus_12753#2 GGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTC 89
************ ********* ***** ** *** * **************
consensus_12753#1 GCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACT 180
consensus_12753#3 GCTGCTGCAGN-AGCGTTGGACGGCAATGCC-ACTTGAAGCACTCCACCTTCTTCCAACT 121
consensus_12753#0 GCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACT 161
consensus_12753#2 GCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACT 149
********** ******************* ****************************
consensus_12753#1 CGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGG-------- 232
consensus_12753#3 CGCCACGGTGGGTGG-ACNGGCAGGCGCG-ANATCGCACCGTCGTATTCAGG-------- 171
consensus_12753#0 CGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGG-------- 213
consensus_12753#2 CGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGTGTCCGCG 209
*************** ******* * ********************
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 ------------------------------------------------------------
consensus_12753#2 GGCGTTGCTCCCCTCAAATTTTGTTTTATTTTGCACTGGTTTTGACCCGGGAAATTTTTG 269
consensus_12753#1 -----------GGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAA 281
consensus_12753#3 -----------GGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAA 220
consensus_12753#0 -----------GGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAA 262
consensus_12753#2 GTCATGTTAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAA 329
*************************************************
consensus_12753#1 GCAATAAGAT-TGGTG--AGATCAGGAA-TTGCTCCTTTGGTGAGATATGTTGGTACTTT 337
consensus_12753#3 GCAATAAGAT-TGGTG--AGATCAGGAA-TTGCTCCTTTGGTGAGATATGTTGGTACTTT 276
consensus_12753#0 GCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGT-ATCTACAATGTATTGCT 321
consensus_12753#2 GCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGT-ATCTACAATGTATTGCT 388
******** * ** ** * *** * *** ** ** * ** ** *
consensus_12753#1 ACT-GACACTTGGG-AACAATTCCGTAT-CAGCGGATTCATAGATGTGATTGATGG-TT- 392
consensus_12753#3 ACTTGACACTTNGGGAACAATTCCGTATTCAGCGGATTCATAGATGTTATTTATGGGTT- 335
consensus_12753#0 GCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTG 381
consensus_12753#2 GCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTG 448
* ** ** ** * * * **** * ***** * * ** **
consensus_12753#1 --CAAACCCCGAACCTGTCAAGCTACAGCT-GAGAGAGA---GAGCTTGGTTT-GGAAGC 445
consensus_12753#3 --CAAACCCCGAACCTGTTAAGCTACAACTTGAGAGAGA---GANTTTGGTTTTGGAAGC 390
consensus_12753#0 AACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGAC 441
consensus_12753#2 AACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGAC 508
** * * * * * * ** * *** ** * * * * *
consensus_12753#1 TCAGTAAAATCGAGATTGCAGTACTTGGGACCATGCCCAGGTC-TTCCTATTCCGGATGA 504
consensus_12753#3 TTAGTNAAATCGGGATT-CAGTACTTTGGAC-ATNCCCAGGGT-TTCC-ATT-------- 438
consensus_12753#0 GGAT-GGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATG 500
consensus_12753#2 GGANTGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATG 568
* * * * * * * * * * ** * * *
consensus_12753#1 TGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGTCCAGTAGATGCCTTTTGCCT 564
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 ACTACAGATGAATTTCTAACTTTGTTTGCCTTGCAGATATGTTGGTACTTTACTGACACT 560
consensus_12753#2 ACTACAGATGAATTT--------------------------------------------- 583
consensus_12753#1 TCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAAT 624
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 TGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCT 620
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 GTTCACAAGAAACCAGAAGGGAGATGGGACCAACAGTTGGATGGCCGAAAAAATTAGCCC 684
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 GTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAG 680
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTAC 744
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 TACTTGGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCAT 740
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 TAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGA 804
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 CTTGATCCATCAGCTGGTCCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAG 800
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 TCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGG 864
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 GTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGA 860
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 CTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAG 924
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 GATGGGACCAACAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATT 920
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 TGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATA 984
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 GCAGCTCCAAATTTGTTTGTGGATTTATCATGGTAAGAAAGTTGTCTTGATTTGAGTATG 980
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 CAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTT 1044
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 TTTTCTAGCATTTAGAATGTTTAGGTTGGAGCAATTTGGGATATACATCGCCAGAATTTC 1040
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 GCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTTCTTAC 1104
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 TACCATCTATAAGTTTAGTTGACTTGAACTTATAAGCTGAATGGATATTGTTATTGAAGG 1100
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 AGGAATGTTAATGCCATACCATGGATGTTGTCCTGGCCTTCTAAAAAAAAAAAAAAAAAA 1164
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 AATGTTATTTTCTGAGAATGCTAATCCATCTAGCCACTTCTTAGCTGGGTACGAGCTTGC 1160
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 A----------------------------------------------------------- 1165
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 AGAACTGCAGCTACCTGTGGCATCCGAGAGAACCAATTTCCATGTTCAAGTTTTCATCTT 1220
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 TTATAAAACGAGGGAACCGTTCCTCAAGTTCCCTTATAAACACCTGAACCTTTTCAGGTA 1280
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 GGAACCAACACATAGATTGTCCAGATAAACTAGTTTATCTTTTTTGTTTCCCTCGAAAAA 1340
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 AGAAAACGAGTTACCCTTTTATCTTTGAACTGTGGTGTTATGATTTCTTCCGAATGCGTG 1400
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 TTGTATGGTGCATGTTTAATTTAGTGACAGTAGAATTTGAATTCCTTTGGTGTGAACATG 1460
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 GATGATGCAGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGT 1520
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 GCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACG 1580
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 ACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCA 1640
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 CGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGA 1700
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 GGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATAC 1760
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ------------------------------------------------------------
consensus_12753#3 ------------------------------------------------------------
consensus_12753#0 TACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATG 1820
consensus_12753#2 ------------------------------------------------------------
consensus_12753#1 ---------------------------
consensus_12753#3 ---------------------------
consensus_12753#0 TATTCCAGTTTCCTTACAGGAATGTTA 1847
consensus_12753#2 ---------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||