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Oryza sativa
cluster # 12766 cluster # 12766       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12766#0 length = 1862 sequences # 9  
consensus_12766#1 length = 697 sequences # 2  

consensusID : consensus_12766#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1862
fasta sequence
                              [GGGACTCGTATTATCATTTACAATCTTTGGGAGGACGATGAAGGACATTTGGAGCTTGATTTTGATGAGGACATACACGATATTCAACTCAGAGGTGGCAATCGTGATGAGAAAAATATCCTGATGGCTAAGCAGTTTCCGAACTCCAAGCATTTCCTGACTTATAGGCATTCATTAAGGAGCTATGCATCCATTTTATATCTCCGAGTTCCAAGTTTTTTCCAAATGATTTTACGTGGAAAAGAGATTGAGCACCATAATATTGTGACTGACATGATGTTGAAGAAAGAGGTGAAATACAAGCCGGTTGCACCTAATGGTGTTCCAAAGGATTCAAATGTTAAGACCTATGGTAGCCGATGTAACAATTGGCTTTGTTAAAGATGCAAAACATCATGTTGATGTTCAGGGATTTAATGTATACCACAAGAACAGGCTAATAAAGCCTTTCTGGAGAGTGTGGACTGCCGCTGGAAGTGGTGGGCGTGGTGTCATAGGTGTACTGGAAGCTAATTTTATAGAGCCAGCTCATGATAAGCAGGACTTTGAGAGAACAACTCTTCTAGCAAGACTTGAAGCACGATTAATTCAAATGCAGAAAGACTATTGGTCAGGAAATGCTCATCGAATTGGATATTCTGGGACACGTGCTGGCAGATCCAATGAAACAGAAGAGGACGCCCCTGAAGTTACCCAAAGTGCACAGCAATCACCTTACTCTACTGGAAAAAATTATGGAAAATCAAATAAAAAGCAATCGCCTTACTCTACTGGGAAAGATAATGGAAAATCAAATACTAAATCTGGGAAGGCAAGCACGTCATTTCATACTCAGCGAAGAACTGATAAGTCTGCAACGACTAAACAACCTGGAAGATCAATAATGTATGGGCTTTCAGATACCAGTGATGAAAGTGATTCTGAGTTTGTGGGCGCCCCAACTCCAACAAGTTCAAGATCTCATATCCTGAATCCACATAGAAAATCTTTCCAGAATGGGACTGCTTTGGCAACACCTCCATCCAATGGACGGACAGAAAGAGAGAGAAACAAAACTGCATCCCAGCCTGTGCAACTTAATGCAACAAGTAATGGGGATTATACTATTGATGATCATGAGACTATTATCAAGCAACTGAGGGGCGAAAACTCATCGTTGAAGGAAAGGTTACTGAAGGTGGAAGAATCATTGTCACAGGAGCTGG-CGATTGAACGTGATAAGAACAAATCGTT-AACAGAGAGG-TTAGAGGATGCACAGAGGCAACTAGAAACTTCAAACA-AGGAACAAGAAGCATT-GATT-GAC-ATCTTCTCAGAAGAAAGAGGT-CGACGAGACCTAGAAGAGGAAAATCTGCGAGGGAAGCTAAAGGAT-GCTTCTTCTACC-ATACAAGATTTGCTGGA-GCAATT-AAACGCTGCCCGAAAAGGTCGCAAGTTTTGAG-AAAAAATAGCTAT-TTTGCTACCAAAAATTCACTAACCGGAAGACCTCTAGTTTTCAGTTACACTGACGTGAAGGATTCCAGCCATTCTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTAT-GTTTAGTGTTGATAGGTAGTTCC-AT-CATCTCACTTCCAGAT-CACTTCCAGCATTGTGTACAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTAT-GTGAGTTTGTAGGTAAAAACAC-TCGCTAGGCCTTTTAATACTTAATTAGTCATTTCG-TTCGTTGTG-TTCAATGTTACACGTGGTTGTGTCAAATCAGTCTCGATTTTTTGTGCCTGGGCTTTTGAGACTCTTTATCTCGAGTCTGACAGTGAAACAGTGTTAATCAACGGCCGTATGGGAGGTAAAAGGCATGGCTTGA]

[+] EMBL CB660768             [GGGACTCGTATTATCATTTACAATCTTTGGGAGGACGATGAAGGACATTTGGAGCTTGATTTTGATGAGGACATACACGATATTCAACTCAGAGGTGGCAATCGTGATGAGAAAAATATCCTGATGGCTAAGCAGTTTCCGAACTCCAAGCATTTCCTGACTTATAGGCATTCATTAAGGAGCTATGCATCCATTTTATATCTCCGAGTTCCAAGTTTTTTCCAAATGATTTTACGTGGAAAAGAGATTGAGCACCATAATATTGTGACTGACATGATGTTGAAGAAAGAGGTGAAATACAAGCCGGTTGCACCTAATGGTGTTCCAAAGGATTCAAATGTTAAGACCTATGGTAGCCGATGTAACAATTGGCTTTGTTAAAGATGCAAAACATCATGTTGATGTTCAGGGATTTAATGTATACCACAAGAACAGGCTAATAAAGCCTTTCTGGAGAGTGTGGACTGCCGCTGGAAGTGGTGGGCGTGGTGTCATAGGTGTACTGGAAGCTAATTTTATAGAGCCAGCTCATGATAAGCAGGACTTTGAGAGAACAACTCTTCTAGCAAGACTTGAAGCACGATTAATTCAAATGCAGAAAGACTATTGGTCAGGAAATGCTCATCGAATTGGATATTCTGGGACACGTGCTGGCAGATCCAATGAAACAGAAGAGGACGCCCCTGAAGTTACCCAAAGTGCACAGCAATCACCTTACTCTACTGGAAAAAATTATGGAAAATCAAATAAAAAGCAATCGCCTTACTCTACTGGGAAAGATAATGGAAAATCAAATACTANATCTGGGAAGGCAAGCACGTCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB669497             [                                             CATTTGGCCCTTGATTTTGATGACGACATACACGATATTCAACTCAGAGGTGGCAATCGTGATGAGAAAAATATCCTGATGGCTAACCAGTTTCCGAACTCCAAGCATTTCCTGACTTATATGCATTCATTAAGGAGCTATGCATCCATTTTATATCTCCGAGTTCCAAGTTTTTTCCAAATGATTTTACGTGGAAAAGAGATTGAGCACCATAATATTGTGACTGACATGATGGTGAAGAAAGAGGTGAAATACAAGCCGGTTGCACCTAATGGCGTTCCAAAGGATTCAAATGTTAAGACCTATGGTAGCCGATGTAACAATTGGCTTTGCTAAAGATGCAAAACATCATGGTGATGTTCAGGGATTTAATGTATACCACAAGAACAGGCTAATAAAGCCTTTCTGGACAGCGTGGACTGCCGCTGGAAGTGGTGGGCGTGGTGTCATATGTGTACTGGAAGCTAATTTTATAGAGCCAGCTCATGATAAGCACGACTTTGAGAGAACAACTCTTCTAGCAAGACTTGAAGCACGATTAATTCAAATGCAGAAAGACTATTGGTCATGAAATGCTCATCGAATTGGATATTCTGGGACACGTGCTGGCACATCCAATGAAACAGAAGAGGACGCCCCTGAAGTTACCCAAAGTGCACAGCAATCACCTTACTCTACTGGAAAAAATTATGGAATATCAAATAAAAAGCAATCGCCTTACTCTACTGGGAAAGATAATGGAAAATCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BP184536             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAATGCAGAAAGACTATTGGTCAGGAAATGCTCATCGAATTGGATATTCTGGGACACGTGCTGGCAGATCCAATGAAACAGAAGAGGACGCCCCTGAAGTTACCCAAAGTGCACAGCAATCACCTTACTCTACTGGAAAAAATTATGGAAAATCAAATAAAAAGCAATCGCCTTACTCTACTGGGAAAGATAATGGAAAATCAAATACTAAATCTGGGAAGGCAAGCACGTCATTTCATACTCAGCGAAGAACTGATAAGTCTGCAACGACTAAACAACCTGGAAGATCAATAATGTATGGGCTTTCAGATACCAGTGATGAAAGTGATTCTGAGTTTGTGGGCGCCCCAACTCCAACAAGTTCAAGATCTCATATCCTGAATCCACATAGAAAATCTTTCCAGAATGGGACTGCTTTGGCAACACCTTCATTCAATGGACGGACAGAAAGAGAGAGAAACAAAACTGNATTCCANCCTGTGCAACTTAATGCAACAAGT ATGGGGgant                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BP184487             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACTCTACTGGGAAAGATAATGGAAAATCAAATACTAAATCTGGGAAGGCAAGCACGTCATTTCATACTCAGCGAAGAACTGATAAGTCTGCAACGACTAAACAACCTGGAAGATCAATAATGTATGGGCTTTCAGATACCAGTGATGAAAGTGATTCTGAGTTTGTGGGCGCCCCAACTCCAACAAGTTCAAGATCTCATATCCTGAATCCACATAGAAAATCTTTCCAGAATGGGACTGCTTTGGCAACACCTCCATCCAATGGACGGACAGAAAGAGAGAGAAACAAAACTGCATCCCAGCCTGTGCAACTTAATGCAACAAGTAATGGGGATTATACTATTGATGATCATGAGACTATTATCAAGCAACTGAGGGGCGAAAACTCATCGTTGAAGGAAAGGTTACTGAAGGTGGAAGAATCATTGTCACAGGAGCTGG CGATTGAACGTGATAAGAACAAATCGTT AACAGAGAGG TTAGAGGATGCACAGAGGCAACTAGAAACTTCAAACA AGGAACAAGAAGCATT GATT GAC ATCTTCTCAGAAGAAAGAGGT CGACGAGACCTAGAAGAGGAAAATCTGCGAGGGAAGCTAAAGGAT GCTTCTTCTACC ATACAAGATTTGCTGGA GCAATT AAACGCTGCCCGAAAAGGTCGCAAGTTTTGAG AAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB669498             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGAAAATCTTTCCAGAATGGGACTGCTTTGGCAACACCTCCATCCAATGGACGGACAGAAAGAGAGAGAAACAAAACTGCATCCCAGCCTGTGCAACTTAATGCAACAAGTAATGGGGATTATACTATTGATGATCATGAGACTATTATCAAGCAACTGAGGGGCGAAAACTCATCGTTGAAGGAAAGGTTACTGAAGGTGGAAGAATCATTGTCACAGGAGCTGG CGATTGAACGTGATAAGAACAAATCGTT AACAGAGAGG TTAGAGGATGCACAGAGGCAACTAGAAACTTCAAACA AGGAACAAGAAGCATT GATT GAC ATCTTCTCAGAAGAAAGAGGT CGACGAGACCTAGAAGAGGAAAATCTGCGAGGGAAGCTAAAGGAT GCTTCTTCTACC ATACAAGATTTGCTGGA GCAATT AAACGCTGCCCGAAAAGGTCGCAAGTTTTGAG AAAAAATAGCTAT TTTGCTACCAAAAATTCACTAACCGGAAGACCTCTAGTTTTCAGTTACACTGACGTGAAGGATTCCAGCCATTCTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTAT GTTTAGTGTTGATAGGTAGTTCC AT CATCTCACTTCCAGAT CACTTCCAGCATTGTGTACAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTAT GTGAGTTTGTAGGTAAAAACAC TCGCTAGGCCTTTTAATACTTAATTAGTCATTTCG TTCGTTGTG TTCAATGTTACACGTGGTTGTGTCAAATCAGTCTCGATTTTTTGTGCCTGGGCTTTTGAGA                                                                        ]
[-] EMBL CB660769             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCAACTTAATGCAACAAGTAATGGGGATTATACTATTGATGATCATGAGACTATTATCAAGCAACTGAGGGGCGAAAACTCATCGTTGAAGGAAAGGTTACTGAAGGTGGAAGAATCATTGTCACAGGAGCTGG CGATTGAACGTGATAAGAACAAATCGTT AACAGAGAGG TTAGAGGATGCACAGAGGCAACTAGAAACTTCAAACA AGGAACAAGAAGCATT GATT GAC ATCTTCTCAGAAGAAAGAGGT CGACGAGACCTAGAAGAGGAAAATCTGCGAGGGAAGCTAAAGGAT GCTTTTTTTACC ATACAAGATTTGCTGGA GCAATT AAACGCTGCCCGAAAAGGTCGCAAGTTTTGAG AAAAAATAGCTAT TTTGCTACCAAAAATTCACTAACCGGAAGACCTTTAGTTTTCAGTTACACTGACGTGAAGGATTCCAGCCATTTTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTAT GTTTAGTGTTGATAGGTAGTTCC AT CATCTCACTTCCAGAT CACTTCCAGCATTGTGTACAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTAT GTGAGTTTGTAGGTAAAAACAC TCGCTAGGCCTTTTAATACTTAATTAGTCATTTCG TTCGTTGTG TTCAATGTTACACGTGGTTGTGTCAAATCAGTCTCGATT                                                                                              ]
[+] EMBL CB096370             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCATCGTTGAAGGAAAGGTTACTGAAGGTGGAAGAATCATTGTCACAGGAGCTGG CGATTGAACGTGATAAGAACAAATCGTT AACAGAGAGG TTAGAGGATGCACAGAGGCAACTAGAAACTTCAAACA AGGAACAAGAAGCATT GATT GAC ATCTTCTCAGAAGAAAGAGGT CGACGAGACCTAGAAGAGGAAAATCTGCGAGGGAAGCTAAAGGAT GCTTCTTCTACC ATACAAGATTTGCTGGA GCAATT AAACGCTGCCCGAAAAGGTCGCAAGTTTTGAGAAAAAAATAGCTAT TTTGCTACCAAAAATTCACTAACCGGAAGACCTCTACTTTTCAGTTACACTGACGTGAAGGATTCCAGCCATTCTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTAT GTTTAGTGTTGATAGGTAGTTCC AT CATCTCACTTCCAGAT CACTTCCAGCATTGTGTACAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTAT GTGAGTTTGTAGGTAAAAACACTTTGCTAGGCCTTTTAATACTTAATTAGTCATTTCG NTCGg                                                                                                                                          ]
[+] EMBL BQ908059             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAATCATGGTCACAGGAGCTGGCCGATTGAACGTGATAAGCACAAATCGTTGAACAGAGAGGTTTAGAGGATGCACAGAGGCAACTAGAAACTTCAAACATAGGNACAAGAAGCATTGGATTGGACTATCTTCTCAGAAGAAAGAGTTCCGACGAGACCTAGAAGAGGAAAATCTGCGAGGGAAGCTAAAGGATGGCTTCTTCTACCTATACAAGATTTGCTGGACGCAATTGAAACGCTGCCCGAAAAGGTCGCAAGTTTTGAG AAAAAATAGCTATGTTGGCTACCAAAAATTCACTAACCGGAAGACCTCNACTTTTCAGTTACACTGACGTGAAGGATTCCA CCATTCTAGCTTGTGTAGGGAGA GCTGTAGGCTATTCCCCTATGGTTTAGTGTTNATAGGTAGTGCCAATGCATCTCACTTCCAGATGCACTTCCAGCATGGNGTACAGGCAAGGAAT CCAATAAAGGCTACTGTTAGTGATCGGTATGGTGGATTTGTAGGTAAAAACAC TCGCTAGCCCTTTTAATACTTAATTAGTCATTTCGTTTCGTNGTGTTTCAAaaaaaa                                                                                                                          ]
[+] EMBL AK059112             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GG TTAGAGGATGCACAGAGGCAACTAGAAACTTCAAACA AGGAACAAGAAGCATT GATT GAC ATCTTCTCAGAAGAAAGAGGT CGACGAGACCTAGAAGAGGAAAATCTGCGAGGGAAGCTAAAGGAT GCTTCTTCTACC ATACAAGATTTGCTGGA GCAATT AAACGCTGCCCGAAAAGGTCGCAAGTTTTGAG AAAAAATAGCTAT TTTGCTACCAAAAATTCACTAACCGGAAGACCTCTAGTTTTCAGTTACACTGACGTGAAGGATTCCAGCCATTCTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTAT GTTTAGTGTTGATAGGTAGTTCC AT CATCTCACTTCCAGAT CACTTCCAGCATTGTGTACAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTAT GTGAGTTTGTAGGTAAAAACAC TCGCTAGGCCTTTTAATACTTAATTAGTCATTTCG TTCGTTGTG TTCAATGTTACACGTGGTTGTGTCAAATCAGTCTCGATTTTTTGTGCCTGGGCTTTTCATCCTCTTTATCTCGAGTCTGACAGTGAAACAGTGTTAATCAACGGCCGTATGGGAGGTAAAAGGCATGGCTTGA]


>consensus_12766#0 GGGACTCGTATTATCATTTACAATCTTTGGGAGGACGATGAAGGACATTTGGAGCTTGAT TTTGATGAGGACATACACGATATTCAACTCAGAGGTGGCAATCGTGATGAGAAAAATATC CTGATGGCTAAGCAGTTTCCGAACTCCAAGCATTTCCTGACTTATAGGCATTCATTAAGG AGCTATGCATCCATTTTATATCTCCGAGTTCCAAGTTTTTTCCAAATGATTTTACGTGGA AAAGAGATTGAGCACCATAATATTGTGACTGACATGATGTTGAAGAAAGAGGTGAAATAC AAGCCGGTTGCACCTAATGGTGTTCCAAAGGATTCAAATGTTAAGACCTATGGTAGCCGA TGTAACAATTGGCTTTGTTAAAGATGCAAAACATCATGTTGATGTTCAGGGATTTAATGT ATACCACAAGAACAGGCTAATAAAGCCTTTCTGGAGAGTGTGGACTGCCGCTGGAAGTGG TGGGCGTGGTGTCATAGGTGTACTGGAAGCTAATTTTATAGAGCCAGCTCATGATAAGCA GGACTTTGAGAGAACAACTCTTCTAGCAAGACTTGAAGCACGATTAATTCAAATGCAGAA AGACTATTGGTCAGGAAATGCTCATCGAATTGGATATTCTGGGACACGTGCTGGCAGATC CAATGAAACAGAAGAGGACGCCCCTGAAGTTACCCAAAGTGCACAGCAATCACCTTACTC TACTGGAAAAAATTATGGAAAATCAAATAAAAAGCAATCGCCTTACTCTACTGGGAAAGA TAATGGAAAATCAAATACTAAATCTGGGAAGGCAAGCACGTCATTTCATACTCAGCGAAG AACTGATAAGTCTGCAACGACTAAACAACCTGGAAGATCAATAATGTATGGGCTTTCAGA TACCAGTGATGAAAGTGATTCTGAGTTTGTGGGCGCCCCAACTCCAACAAGTTCAAGATC TCATATCCTGAATCCACATAGAAAATCTTTCCAGAATGGGACTGCTTTGGCAACACCTCC ATCCAATGGACGGACAGAAAGAGAGAGAAACAAAACTGCATCCCAGCCTGTGCAACTTAA TGCAACAAGTAATGGGGATTATACTATTGATGATCATGAGACTATTATCAAGCAACTGAG GGGCGAAAACTCATCGTTGAAGGAAAGGTTACTGAAGGTGGAAGAATCATTGTCACAGGA GCTGGCGATTGAACGTGATAAGAACAAATCGTTAACAGAGAGGTTAGAGGATGCACAGAG GCAACTAGAAACTTCAAACAAGGAACAAGAAGCATTGATTGACATCTTCTCAGAAGAAAG AGGTCGACGAGACCTAGAAGAGGAAAATCTGCGAGGGAAGCTAAAGGATGCTTCTTCTAC CATACAAGATTTGCTGGAGCAATTAAACGCTGCCCGAAAAGGTCGCAAGTTTTGAGAAAA AATAGCTATTTTGCTACCAAAAATTCACTAACCGGAAGACCTCTAGTTTTCAGTTACACT GACGTGAAGGATTCCAGCCATTCTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTA TGTTTAGTGTTGATAGGTAGTTCCATCATCTCACTTCCAGATCACTTCCAGCATTGTGTA CAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTATGTGAGTTTGTAGGTAAA AACACTCGCTAGGCCTTTTAATACTTAATTAGTCATTTCGTTCGTTGTGTTCAATGTTAC ACGTGGTTGTGTCAAATCAGTCTCGATTTTTTGTGCCTGGGCTTTTGAGACTCTTTATCT CGAGTCTGACAGTGAAACAGTGTTAATCAACGGCCGTATGGGAGGTAAAAGGCATGGCTT GA



consensusID : consensus_12766#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 697
fasta sequence
                              [TTNTTCTTTGTGAAACTTGCAGTAACATTTTTTCCCACAGTTTACTAAGGTATGAAGTTTTATCACGAGAATGTTAGAAAATGCCTTTGCTCCTTTGTGCTGCTTCTTTGTCAGGTTACTGAAGGTGGAAGAATCATTGTCACAGGAGCTGGCGATTGAACGTGATAAGAACAAATCGTTAACAGAGAGGTTAGAGGATGCACAGAGGCAACTAGAAACTTCAAACAAGGAACAAGAAGCATTGATTGACATCTTCTCAGAAGAAAGAGGTCGACGAGACCTAGAAGAGGAAAATTTGCGAGGGAAGCTAAAGGATGCTTTTTTTACCATACAAGATTTGCTGGAGCAATTAAACGCTGCCCGAAAAGGTCGCAAGTTTTGAGAAAAAATAGCTATTTTGCTACCAAAAATTCCCTAACCGGAAGACCTTTACTTTTCAGTTACACTGACGTGAAGGATTCCAGCCCTTCTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTATGTTTAGTGTTGATAGGTAGTTCCATCATCTCACTTCCAGATCACTTCCAGCATTGTGTACAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTATGTGAGTTTGTAGGTAAAAACCCTCGCTAGGCCTTTTAATACTTAATTAGTCATTTCGTTCGTTGTGTTCAAAAAAAAAAAAAAAAAA]

[-] EMBL CA762729             [TTNTTCTTTGTGAAACTTGCAGTAACATTTTTTCCCACAGTTTACTAAGGTATGAAGTTTTATCACGAGAATGTTAGAAAATGCCTTTGCTCCTTTGTGCTGCTTCTTTGTCAGGTTACTGAAGGTGGAAGAATCATTGTCACAGGAGCTGGCGATTGAACGTGATAAGAACAAATCGTTAACAGAGAGGTTAGAGGATGCACAGAGGCAACTAGAAACTTCAAACAAGGAACAAGAAGCATTGATTGACATCTTCTCAGAAGAAAGAGGTCGACGAGACCTAGAAGAGGAAAATTTGCGAGGGAAGCTAAAGGATGCTTTTTTTACCATACAAGATTTGCTGGAGCAATTAAACGCTGCCCGAAAAGGTCGCAAGTTTTGAGAAAAAATAGCTATTTTGCTACCAAAAATTCCCTAACCGGAAGACCTTTACTTTTCAGTTACACTGACGTGAAGGATTCCAGCCCTTCTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTATGTTTAGTGTTGATAGGTAGTTCCATCATCTCACTTCCAGATCACTTCCAGCATTGTGTACAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTATGTGAGTTTGTAGGTAAAAACCCTCGCTAGGCCTTTTAATACTTAATTAGTCATTTCGTTCGTTGTGTTCAAAAAAAAAAAAAAAAAA]
[+] EMBL BP184537             [                                                                                                                                           gCACAGGAGCTGGCGATTGAACGTGATAAGAACAAATCGTTAACAGAGAGGTTAGAGGATGCACAGAGGCAACTAGAAAC TCAAACAAGGAACAAGAAGCATTGATTGACATCTTCTCAGAAGAAAGAGGTCGACGAGACCTAGAAGAGGAAAATCTGCGAGGGAAGCTAAAGGATGCTTCTTCTACCATACAAGATTTGCTGGAGCAATTAAACGCTGCCCGAAAAGGTCGCAAGTTTTGAGAAAAAATAGCTATTTTGCTACCAAAAATTCACTAACCGGAAGACCTCTAGTTTTCAGTTACACTGACGTGAAGGATTCCAGCCATTCTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTATGTTTAGTGTTGATAGGTAGTTCCATCATCTCACTTCCAGATCACTTCCAGCATTGTGTACAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTATGTGAGTTTGTAGGTAAAAACACTCGCTAGGCCTTTTAATACTTAATTAGTCATTTCGTTCGTTGTGTTCAAAAAAAAAAAAAAAA  ]


>consensus_12766#1 TTNTTCTTTGTGAAACTTGCAGTAACATTTTTTCCCACAGTTTACTAAGGTATGAAGTTT TATCACGAGAATGTTAGAAAATGCCTTTGCTCCTTTGTGCTGCTTCTTTGTCAGGTTACT GAAGGTGGAAGAATCATTGTCACAGGAGCTGGCGATTGAACGTGATAAGAACAAATCGTT AACAGAGAGGTTAGAGGATGCACAGAGGCAACTAGAAACTTCAAACAAGGAACAAGAAGC ATTGATTGACATCTTCTCAGAAGAAAGAGGTCGACGAGACCTAGAAGAGGAAAATTTGCG AGGGAAGCTAAAGGATGCTTTTTTTACCATACAAGATTTGCTGGAGCAATTAAACGCTGC CCGAAAAGGTCGCAAGTTTTGAGAAAAAATAGCTATTTTGCTACCAAAAATTCCCTAACC GGAAGACCTTTACTTTTCAGTTACACTGACGTGAAGGATTCCAGCCCTTCTAGCTTGTGT AGGGAGAGGCTGTAGGCTATTCCCCTATGTTTAGTGTTGATAGGTAGTTCCATCATCTCA CTTCCAGATCACTTCCAGCATTGTGTACAGGCAAGGAATGCCAATAAAGGCTACTGTTAG TGATCGGTATGTGAGTTTGTAGGTAAAAACCCTCGCTAGGCCTTTTAATACTTAATTAGT CATTTCGTTCGTTGTGTTCAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12766#0      GGGACTCGTATTATCATTTACAATCTTTGGGAGGACGATGAAGGACATTTGGAGCTTGAT 60
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      TTTGATGAGGACATACACGATATTCAACTCAGAGGTGGCAATCGTGATGAGAAAAATATC 120
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      CTGATGGCTAAGCAGTTTCCGAACTCCAAGCATTTCCTGACTTATAGGCATTCATTAAGG 180
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      AGCTATGCATCCATTTTATATCTCCGAGTTCCAAGTTTTTTCCAAATGATTTTACGTGGA 240
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      AAAGAGATTGAGCACCATAATATTGTGACTGACATGATGTTGAAGAAAGAGGTGAAATAC 300
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      AAGCCGGTTGCACCTAATGGTGTTCCAAAGGATTCAAATGTTAAGACCTATGGTAGCCGA 360
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      TGTAACAATTGGCTTTGTTAAAGATGCAAAACATCATGTTGATGTTCAGGGATTTAATGT 420
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      ATACCACAAGAACAGGCTAATAAAGCCTTTCTGGAGAGTGTGGACTGCCGCTGGAAGTGG 480
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      TGGGCGTGGTGTCATAGGTGTACTGGAAGCTAATTTTATAGAGCCAGCTCATGATAAGCA 540
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      GGACTTTGAGAGAACAACTCTTCTAGCAAGACTTGAAGCACGATTAATTCAAATGCAGAA 600
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      AGACTATTGGTCAGGAAATGCTCATCGAATTGGATATTCTGGGACACGTGCTGGCAGATC 660
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      CAATGAAACAGAAGAGGACGCCCCTGAAGTTACCCAAAGTGCACAGCAATCACCTTACTC 720
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      TACTGGAAAAAATTATGGAAAATCAAATAAAAAGCAATCGCCTTACTCTACTGGGAAAGA 780
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      TAATGGAAAATCAAATACTAAATCTGGGAAGGCAAGCACGTCATTTCATACTCAGCGAAG 840
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      AACTGATAAGTCTGCAACGACTAAACAACCTGGAAGATCAATAATGTATGGGCTTTCAGA 900
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      TACCAGTGATGAAAGTGATTCTGAGTTTGTGGGCGCCCCAACTCCAACAAGTTCAAGATC 960
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      TCATATCCTGAATCCACATAGAAAATCTTTCCAGAATGGGACTGCTTTGGCAACACCTCC 1020
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      ATCCAATGGACGGACAGAAAGAGAGAGAAACAAAACTGCATCCCAGCCTGTGCAACTTAA 1080
consensus_12766#1      ----------------------------TTNTTCTTTGTGAAACTTGCAGTAACATTTTT 32
                                                           **     *   * **   * **  

consensus_12766#0      TGCAACAAGTAATGGGGATTATACTATTGATGATCATGAGACTATTATCAAGCAACTGAG 1140
consensus_12766#1      TCCCACAGTTTACTAAGGT-ATGAAGTT--TTATCACGAGAATGTTAGAAAATGCCTTTG 89
                       * * ***  * *    * * **    **  * **** **** * ***  **    **  *

consensus_12766#0      GGGCGAAAACTCATCGTTGAAGGAAAGGTTACTGAAGGTGGAAGAATCATTGTCACAGGA 1200
consensus_12766#1      CTCCTTTG--TGCTGCTTCTTTGTCAGGTTACTGAAGGTGGAAGAATCATTGTCACAGGA 147
                          *      *  *  **    *  ***********************************

consensus_12766#0      GCTGGCGATTGAACGTGATAAGAACAAATCGTTAACAGAGAGGTTAGAGGATGCACAGAG 1260
consensus_12766#1      GCTGGCGATTGAACGTGATAAGAACAAATCGTTAACAGAGAGGTTAGAGGATGCACAGAG 207
                       ************************************************************

consensus_12766#0      GCAACTAGAAACTTCAAACAAGGAACAAGAAGCATTGATTGACATCTTCTCAGAAGAAAG 1320
consensus_12766#1      GCAACTAGAAACTTCAAACAAGGAACAAGAAGCATTGATTGACATCTTCTCAGAAGAAAG 267
                       ************************************************************

consensus_12766#0      AGGTCGACGAGACCTAGAAGAGGAAAATCTGCGAGGGAAGCTAAAGGATGCTTCTTCTAC 1380
consensus_12766#1      AGGTCGACGAGACCTAGAAGAGGAAAATTTGCGAGGGAAGCTAAAGGATGCTTTTTTTAC 327
                       **************************** ************************ ** ***

consensus_12766#0      CATACAAGATTTGCTGGAGCAATTAAACGCTGCCCGAAAAGGTCGCAAGTTTTGAGAAAA 1440
consensus_12766#1      CATACAAGATTTGCTGGAGCAATTAAACGCTGCCCGAAAAGGTCGCAAGTTTTGAGAAAA 387
                       ************************************************************

consensus_12766#0      AATAGCTATTTTGCTACCAAAAATTCACTAACCGGAAGACCTCTAGTTTTCAGTTACACT 1500
consensus_12766#1      AATAGCTATTTTGCTACCAAAAATTCCCTAACCGGAAGACCTTTACTTTTCAGTTACACT 447
                       ************************** *************** ** **************

consensus_12766#0      GACGTGAAGGATTCCAGCCATTCTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTA 1560
consensus_12766#1      GACGTGAAGGATTCCAGCCCTTCTAGCTTGTGTAGGGAGAGGCTGTAGGCTATTCCCCTA 507
                       ******************* ****************************************

consensus_12766#0      TGTTTAGTGTTGATAGGTAGTTCCATCATCTCACTTCCAGATCACTTCCAGCATTGTGTA 1620
consensus_12766#1      TGTTTAGTGTTGATAGGTAGTTCCATCATCTCACTTCCAGATCACTTCCAGCATTGTGTA 567
                       ************************************************************

consensus_12766#0      CAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTATGTGAGTTTGTAGGTAAA 1680
consensus_12766#1      CAGGCAAGGAATGCCAATAAAGGCTACTGTTAGTGATCGGTATGTGAGTTTGTAGGTAAA 627
                       ************************************************************

consensus_12766#0      AACACTCGCTAGGCCTTTTAATACTTAATTAGTCATTTCGTTCGTTGTGTTCAATGTTAC 1740
consensus_12766#1      AACCCTCGCTAGGCCTTTTAATACTTAATTAGTCATTTCGTTCGTTGTGTTCAAAAAAAA 687
                       *** **************************************************    * 

consensus_12766#0      ACGTGGTTGTGTCAAATCAGTCTCGATTTTTTGTGCCTGGGCTTTTGAGACTCTTTATCT 1800
consensus_12766#1      AAAAAAAAAA-------------------------------------------------- 697
                       *                                                           

consensus_12766#0      CGAGTCTGACAGTGAAACAGTGTTAATCAACGGCCGTATGGGAGGTAAAAGGCATGGCTT 1860
consensus_12766#1      ------------------------------------------------------------
                                                                                   

consensus_12766#0      GA 1862
consensus_12766#1      --
                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)