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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12767#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2402 fasta sequence
[AGCAGTCAAGCCGCGCACGCAGAGAGAGGCAGGCAAGGCAACGCAACGAAGGCGAAGCTGCCTGCCTCTGCCGCGCCGCGCCGCGCGAGATCTGGGCGGAAGGGAAGGCGCGGCGCGACGCGACGCACGAGAGAAACAAAAGGAAAAGGGAGGGGCGGGGGGGACAAAAACCTTCGCCGCACAAAGCGGTTACCGCGTCCCCCCAGATCTCGTCGCCGTGCCGTGCCGTGCCCTGCCCTTGCCCCGCTGGATACCGGCGGCGCACCGGCGCGGCCGCGCGATCCGATGAGGCGGCGGCCGTTCCTCGACCAGCGGCGGCCGTCGTCGTTCAAGCGCCGGTGGCAGCAGCGCCCGTGGTGGTTCCGCCTCGCGGTCACCCTCCTCCTCGCCCTCGCCTGCCTCTTCCTCCTGCTCGCGCTCCGGGGCTCGCCCGACCCCGACCCGGTGGTGCTCCCCTCCACCGACTCGTCCAGATCCGCGGCCACCACCTCCCCTCTCCTCCATCAGAGATCTTACCTCGATGGCGTTACGGATGCGTTCAACATGACCGACGAAATGCTGAGTGCTCACTCGTTTTCAAGGCAGCTTATGGACCAGATTTCCCTTGCAAAAACCTACCTCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCAGGATGCGGAGAAGGCAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCAGCAGTTCCGCTATGATAGTGCAGTTACAATCATGAAGTTGAAGGGTCAGATTCAATCCCTAGAGGAGAAATCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCCAAAGGGGCTTTACTGCCTTGGAGTCCGGTTAACCATGGAATGGTTCAAGACAACTGAGCTCCAGAGGAAGTTTACTGAGAGGAGCCCAGCAGTACAGAGCAACCTAAGGGATAACAGCCTTTACCATTACTGTGTTTTCTCGGACAACATCCTTGCTGTTTCTGTTGTCGTCAATTCTACAACTCTAAATTCAATGCGCCCTGAAAAGATTGTTTTTCACTTGGTGACTGACGAGGTGAATTATGCTCCCATGAGGGCGTGGTTCGCCCTGAATGATTACAGAGGAGCCACTGTGGAGATTCAAAAGGTAGAGGATTTCACTTGGCTCAATTCATCGTATGTTCCTGTTCTTAAACAGCTCCAGGATGCTGCCACCCAGAACTACTACTTCTCTGGCAGTGGTAATCGTGGAACACCAGTCAAATTCAGGAACCCTAAGTACTTATCAATGCTTAACCACCTGAGGTTCTATATCCCAGAAATCTATCCAGAATTGCGTAAGGTCGTATTTCTTGATGATGACACTGTTGTCCAAAAGGACTTGTCGGAATTGTTTACCATCAACCTCAATGGAAATGTTATGGGAGCTGTAGAGACTTGCATGGAGACATTTCACAGGTTCCATAAGTATCTTAACCATTCCCATCCTCTAATCCGTGCTCATTTTGATCCTGATGCCTGTGGCTGGGCATTTGGTATGAATGTTCTTGATCTTGTGATGTGGAGGAATAAGAATGTGACAGGTATATATCATTACTGGCAAGAGCGCAATGCTGATCATACCCTATGGAAGCTTGGATCTTTACCACCTGGTCTTCTTGCTTTCTATGGCTTGGTTGAGCCATTGGACCCCAAATGGCATGTCTTGGGACTGGGCTACACAACAGTGGATCCCGCTACTATCAAAGAAGGTGCAGTGTTGCATTACAATGGAAATATGAAGCCATGGCTAAAAATTGGGATGGAGAAGTACAAGGGCTTCTGGGATAACTATGTAGACTATTCACACCCTCTGCTTCAGCGGTGCTTCACGCACTAATGAATGTGTATCAACATTAGAATTTTTTGTGAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGATGTTCAGAGTAAAGCTTATTGTTTAAATGTCTCACAAAGCATAA]
[+] EMBL AK067760 [AGCAGTCAAGCCGCGCACGCAGAGAGAGGCAGGCAAGGCAACGCAACGAAGGCGAAGCTGCCTGCCTCTGCCGCGCCGCGCCGCGCGAGATCTGGGCGGAAGGGAAGGCGCGGCGCGACGCGACGCACGAGAGAAACAAAAGGAAAAGGGAGGGGCGGGGGGGACAAAAACCTTCGCCGCACAAAGCGGTTACCGCGTCCCCCCAGATCTCGTCGCCGTGCCGTGCCGTGCCCTGCCCTTGCCCCGCTGGATACCGGCGGCGCACCGGCGCGGCCGCGCGATCCGATGAGGCGGCGGCCGTTCCTCGACCAGCGGCGGCCGTCGTCGTTCAAGCGCCGGTGGCAGCAGCGCCCGTGGTGGTTCCGCCTCGCGGTCACCCTCCTCCTCGCCCTCGCCTGCCTCTTCCTCCTGCTCGCGCTCCGGGGCTCGCCCGACCCCGACCCGGTGGTGCTCCCCTCCACCGACTCGTCCAGATCCGCGGCCACCACCTCCCCTCTCCTCCATCAGAGATCTTACCTCGATGGCGTTACGGATGCGTTCAACATGACCGACGAAATGCTGAGTGCTCACTCGTTTTCAAGGCAGCTTATGGACCAGATTTCCCTTGCAAAAACCTACCTCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCAGGATGCGGAGAAGGCAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCAGCAGTTCCGCTATGATAGTGCAGTTACAATCATGAAGTTGAAGGGTCAGATTCAATCCCTAGAGGAGAAATCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCCAAAGGGGCTTTACTGCCTTGGAGTCCGGTTAACCATGGAATGGTTCAAGACAACTGAGCTCCAGAGGAAGTTTACTGAGAGGAGCCCAGCAGTACAGAGCAACCTAAGGGATAACAGCCTTTACCATTACTGTGTTTTCTCGGACAACATCCTTGCTGTTTCTGTTGTCGTCAATTCTACAACTCTAAATTCAATGCGCCCTGAAAAGATTGTTTTTCACTTGGTGACTGACGAGGTGAATTATGCTCCCATGAGGGCGTGGTTCGCCCTGAATGATTACAGAGGAGCCACTGTGGAGATTCAAAAGGTAGAGGATTTCACTTGGCTCAATTCATCGTATGTTCCTGTTCTTAAACAGCTCCAGGATGCTGCCACCCAGAACTACTACTTCTCTGGCAGTGGTAATCGTGGAACACCAGTCAAATTCAGGAACCCTAAGTACTTATCAATGCTTAACCACCTGAGGTTCTATATCCCAGAAATCTATCCAGAATTGCGTAAGGTCGTATTTCTTGATGATGACACTGTTGTCCAAAAGGACTTGTCGGAATTGTTTACCATCAACCTCAATGGAAATGTTATGGGAGCTGTAGAGACTTGCATGGAGACATTTCACAGGTTCCATAAGTATCTTAACCATTCCCATCCTCTAATCCGTGCTCATTTTGATCCTGATGCCTGTGGCTGGGCATTTGGTATGAATGTTCTTGATCTTGTGATGTGGAGGAATAAGAATGTGACAGGTATATATCATTACTGGCAAGAGCGCAATGCTGATCATACCCTATGGAAGCTTGGATCTTTACCACCTGGTCTTCTTGCTTTCTATGGCTTGGTTGAGCCATTGGACCCCAAATGGCATGTCTTGGGACTGGGCTACACAACAGTGGATCCCGCTACTATCAAAGAAGGTGCAGTGTTGCATTACAATGGAAATATGAAGCCATGGCTAAAAATTGGGATGGAGAAGTACAAGGGCTTCTGGGATAACTATGTAGACTATTCACACCCTCTGCTTCAGCGGTGCTTCACGCACTAATGAATGTGTATCAACATTAGAATTTTTTGTGAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGA ]
[+] EMBL CB647322 [ GTTACCGCCTCCCCCCAGATCTCGTCGCCGTGCCGTGCCGTGCCCTGCCCTTGCCCCGCTGGATACCGGCGGCGCACCGGCGCGGCCGCGCGATCCGATGAGGCGGCGGCCGTTCCTCGACCAGCGGCGGCCGTCGTCGTTCAAGCGCCGGTGGCAGCAGCGCCCGTGGTGGTTCCGCCTCGCGGTCACCCTCCTCCTCGCCCTCGCCTGCCTCTTCCTCCTGCTCGCGCTCCGGGGCTCGCCCGACCCCGACCCGGTGGTGCTCCCCTCCACCGACTCGTCCAGATCCGCGGCCACCACCTCCCCTCTCCTCCATCAGAGATCTTACCTCGATGGCGTTACGGATGCGTTCAACATGACCGACGAAATGCTGAGTGCTCACTCGTTTTCAAGGCAGCTTATGGACCAGATTTCCCTTGCAAAAACCTACCTCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCACGATGCGGAGAACGCAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCAGCAGTTCCGCTATGATAGTGCAGTTACGATCATGAAGTTGAAGGGTCAGATTCAATCCCTAGAGGAGAAACCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCCAAAGGG ]
[+] EMBL BF430794 [ GCCCCGCTGGATACCGGCGGCGCACCGGCGCGGCCGCGCGATCCGATGAGGCGGCGGCCGTTCCTCGACCAGCGGCGGCCGTCGTCGTTCAAGCGCCGGTGGCAGCAGCGCCCGTGGTGGTTCCGCCTCGCGGTCACCCTCCTCCTCGCCCTCGCCTGCCTCTTCCTCCTGCTCGCGCTCCGGGGCTCGCCCGACCCCGACCCGGTGGTGCTCCCCTCCACCGACTCGTCCAGATCCGCGGCCACCACCTCCCCTCTCCTCCATCAGAGATCTTACCTCGATGGCGTTACGGATGCGTTCAACATGACCGACGAAATGCTGAGTGCTCACTCGTTTTCAAGGCAGCTTATGGACCAGATTTCCCTTGCAAAAACCTACCTCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCAGGATGCGGAGAAGGTAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCAGCAGTTCCGCTATGATAGTGCAGTTACAATCATGAAGTTGAAGGGTCAGATTTAATCCCTAGAGGAGAAATCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCC AAGGGGCT ]
[+] EMBL CB673761 [ CCGACCCGGTGGTGCTCCCCTCCACCGACTCGTCCAGATCCGCGGCCACCACCTCCCCTCTCCTCCATCAGAGATCTTACCTCGATGGCGTTACGGATGCGTTCAACATGACCGACGAAATGCTGAGTGCTCACTCGTTTTCAAGGCAGCTTATGGACCAGATTTCCCTTGCAAAAACCTACCTCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCAGGATGCGGAGAAGGCAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCAGCAGTTCCGCTATGATAGTGCAGTTACAATCATGAAGTTGAAGGGTCAGATTCAATCCCTAGAGGAGAAATCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCCAAAGGGGCTTTACTGCCTTGGAGTCCGGTTAACCATGGAATGGTTCAAGACAACTGAGCTCCAGAGGAAGTTTACTGAGAGGAGCCCAGCAGTACAGAGCAACCTAAGGGATAACAGCCTTTACCATTACTGTGTTTTCTCGGACAACATCCTTGCTGTTTCTGTTGTCGTCAATTCTACAACTCTAAATTCAATGCGCCCTGAAAAGATTGTTTTTCACTTGGTGACTGACGAGGTGAATTATGCTC ]
[+] EMBL OSR18711A [ TCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCAGGATGCGGAGAAGGCAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCACGAGTTCCGCTATGATAGTGCAGTTACAATCATGAAGTTGAAGGGTCAGATTCAATCCCTAGAGGAGAAATCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCCAAAGGGGCTTTACTGCCTTNGAGTCCGGTTAACCATGGAATNGTTCAAGACAACTGAG ]
[+] EMBL CA999625 [ AATGCGCCCTGAAAAGATTGTTTTTCACTTGGTGACTGACGAGGTGAATTATGCTCCCATGAGGGCGTGGTTCGCCCTGAATGATTACAGAGGAGCCACTGTGGAGATTCAAAAGGTAGAGGATTTCACTTGGCTCAATTCATCGTATGTTCCTGTTCTTAAACAGCTCCAGGATGCTGCCACCCAGAAC ]
[-] EMBL CB673762 [ CATTTCACAGGTTCCATAAGTATCTTAACCATTCCCATCCTCTAATCCGTGCTCATTTTGATCCTGATGCCTGTGGCTGGGCATTTGGTATGAATGTTCTTGATCTTGTGATGTGGAGGAATAAGAATGTGACAGGTATATATCATTACTGGCAAGAGCGCAATGCTGATCATACCCTATGGAAGCTTGGATCTTTACCACCTGGTCTTCTTGCTTTCTATGGCTTGGTTGAGCCATTGGACCCCAAATGGCATGTCTTGGGACTGGGCTACACAACAGTGGATCCCGCTACTATCAAAGAAGGTGCAGTGTTGCATTACAATGGAAATATGAAGCCATGGCTAAAAATTGGGATGGAGAAGTACAAGGGCTTCTGGGATAACTATGTAGACTATTCACACCCTCTGCTTCAGCGGTGCTTCACGCACTAATGAATGTGTATCAACATTAGAATTTTTTGTGAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGATGTTCAGAG ]
[-] EMBL CB647323 [ GAATGTTCTTGATCTTGTGATGGGGAGGAATAAGAATGTGACAGGTATATATCATTACTGGCAAGAGCGCAATGCTGATCATACCCTATGGAAGCTTGGATCTTTACCACCTGGTCTTCTTGCTTTCTATGGCTTGGTTGAGCCATTGGACCCCAAATGGCATGTCTTGGGACTGGGCTACACAACAGTGGATCCCGCTACTATCAAAGAAGGTGCAGTGTTGCATTACAATGGAAATATGAAGCCATGGCTAAAAATTGGGATGGAGAAGTACAAGGGCTTTTGGGATAACTATGTAGACTATTCACACCCTCTGCTTCAGCGGTGCTTCACGCACTAATGAATGTGTATCAACATTAGAATTTTTTGTGAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATGTATATTTATTGGAT ]
[+] EMBL CA767153 [ agggGGAAATATGAAGCCATGGCTAAAAATTGGGATGGAGAAGTACAAGGGCTTCTGGGATAACTATGTAGACTATTCACACCCTCTGCTTCAGCGGTGCTTCACGCACTAATGAATGTGTATCAACATTAGAATTTTTTGTAAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGATGTTCAGAGCAAAGCTTATTGTTTAAATGTCTCACAAAGCATAA]
[+] EMBL AU173249 [ GAATGTGTATCAACATTAGAATTTTTTGTGAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGATGTTCAGAGTAAAGCTTATTGTTTAAAaa ]
[+] EMBL AU161614 [ acggcnCACCGTCCATTATANACATCCANAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTNGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGATGTTCAGAGTAAAGCTTATTGTTTAAATGTCTCACAAAGCAT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||