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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12769#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2552 fasta sequence
[GGTTTTACCGGGATCACCAAATGGACCGTGTTCTTCTGAGCTCTCAATTGTCATCACAAACGGTTGTTAACACAAGGGTTCAACAAGGAAGCGGTGGTATCAACAGCATAGGATTTGCTGTTATCAGAAAGGGGAGCTTAAAATTGAGATGTTATGCAATTGGTGGACTTGGGGGAGGAGAGAATTTGAATGATCCTTTAAAGGAAAGCAATAATGGACCTGTTTTGCAAGGATTCAATGGATCTAGTGCTTCCTTTCGGACTGTTGGTGCTAAAATCACTCAGGAAACTGGTGATTTCTTTGTTAGCGATGCAGAGGGTGACCCAGACAAACCAACTGATGGTTTTTCCTCTATTGATGAGGCTATAGGCGCATTGCATGAAGGAAAGATGATGAAAGCGGTGATAATGAAGGGGATCTTGTCATGGCAGCTACGCTGGCAGACCCAGAATCTATTGCATTCATGATCAGGAATGGTTCTGGGATCATCTCAGTGGGCATGAAGGAAGAGGACTTAACAAGATTGATGATTCCTATGATGTCTCCAATTGCAGAAATTGAGGATATTTCAGCTGCTGCTTCCACAGTAACAGTGGATGCCAGAGTGGGCATATCAACCGGCGTCTCGGCTGCAGATAGGGCAAAAACGATTTTTACTCTAGCCTCCCCTGATTCTAAGCCAACTGACCTCAGAAGACCAGGCCATATATTCCCTCTAAAATACCGAAACGGTGGTGTGCTAAAAAGAGCTGGACATACTGAGGCATCCGTCGATCTT-GTCGCGTTGGCTGGCTTGCGCCCTGTGTCTGTCCTGTCAACCGTCATCAACCCAGTGGATGGTTCAATGGCAGGAATGCCAGTGCTGAAACAGATGGCTTTGGAGCATGATATCCCAATTGTTTCAATCGCTGATCTCATCCGGTTAGTATACCTTAAGGTGAACCCTTTGTGAACTTATAGCTTGTTTTCTTCTTTCTTTCGGTGAAACTTCATAGCCAGAATTGTTCTTCTTTAGAATGCACTGCTGAAACTACTCTCCAAGGTGGAACCTGAAATAAGAAAAATGGGAATTACCTAGGAGGAACTAGGTATTTTTAATCATGGAAAATAACCGTGTGAATTTGAAGCTAAGATGCTCGAACCAGAAATGAGATGCCATTGGTCATGGAACTAGGACAGTATATGTTAGGATTTTTCAGATATGCAAACATCTTTTGTGAAATCTCATCTCATTCTTTTGGTCTGATTCAGGTATAGAAGGAAGAGGGAGAAGCTGGTGGAACTGATTGCTGTATCTCGTTTGCCGACGAAATGGGGCCTTTTCCGAGCTTACTGCTACCAATCCAAGCTTGATGGAACCGAGCACATTGCTGTTGCAAAGGTGATATACATTATGCTCTTTTCCCTTCTCCTGGGACTTGAAATTGGGCAGAAAATGCAAATTATGTTCTTGTTTGATGTGTCAGAAGAGCAGATTAACTCATCAAGTCATCGCTCATTTCAGTAAAATTTTCTGCAAATTCCTGCTCTTTTCCCTTCTTCTCCTGGACTAGAAATTGGGCAGAAAAATACAAATTCTGTCCTTGTTCGATTTGTCAGAAATAACAAATTGGCAGAATACTCCATCGTTTCATCGTTTATTTCAGCAAATTTTCTGCAAGTTCTGTTCTTGTTTGATGTGTTAGAAATAACAATTTTTTTTGTTAGATAATGGGTTAGAAATAACAATTGGGCAGCAGAATGATCGATCAGTTCATCGCTCATTTCAGCAAATGCAAAAATTTTGTGGCTGATCCGCAGGGCGACATCGGCGACGGCGAGGACGTCTTGGTGAGGGTCCATTCCGAGTGCCTGACCGGCGACATCCTCGGCTCCGCCCGCTGCGACTGCGGCAACCAGCTGGACCTGGCGATGCAGCTCATCGACAAGGCCGGCCGCGGCGTCCTCGTCTACCTCCGCGGCCACGAGGGCCGCGGCATCGGCCTCGGCCAGAAGCTCCGCGCCTACAACCTCCAGGACGACGGCCACGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCCGTCGACTCCCGCGAGTACGGCATCGGCGCCCAGGTAGTGCACCGACATCAACCATGGCGCATTCTGAATTCAATTTTGCATTTGCATTTGCATTTTGATGATTTTGATCCCATTTCAGATTCTGCGGGACATGGGGGTGCGCACGATGCGGCTGATGACGAACAACCCGGCAAAGTTCGTCGGGCTCAAGGGCTACGGGCTCGCCGTCGTCGGCAGGGTTCCGGTGATCTCCCCCATCACCAAGGAGAACCAGAGGTACCTCGAGACGAAGCGCACCAAGATGGGCCATGTCTACGGCTCCGACCTCCCCGGCAACGTCCCGGAGGAATTCCTCAACCCGGACGACATCGCCGGAGACCAAGACGAAGACGACACCCACAACTGAATGCAACAACAAAATTCACAACCACAGATTCTCCACATCTCATTTTGTGATCAAATTGCATCTCAAACTGCACCGATCTTGTTATACTAGTAACAAATCTTGA]
[+] EMBL AK067655 [GGTTTTACCGGGATCACCAAATGGACCGTGTTCTTCTGAGCTCTCAATTGTCATCACAAACGGTTGTTAACACAAGGGTTCAACAAGGAAGCGGTGGTATCAACAGCATAGGATTTGCTGTTATCAGAAAGGGGAGCTTAAAATTGAGATGTTATGCAATTGGTGGACTTGGGGGAGGAGAGAATTTGAATGATCCTTTAAAGGAAAGCAATAATGGACCTGTTTTGCAAGGATTCAATGGATCTAGTGCTTCCTTTCGGACTGTTGGTGCTAAAATCACTCAGGAAACTGGTGATTTCTTTGTTAGCGATGCAGAGGGTGACCCAGACAAACCAACTGATGGTTTTTCCTCTATTGATGAGGCTATAGGCGCATTGCATGAAGGAAAGATGATGAAAGCGGTGATAATGAAGGGGATCTTGTCATGGCAGCTACGCTGGCAGACCCAGAATCTATTGCATTCATGATCAGGAATGGTTCTGGGATCATCTCAGTGGGCATGAAGGAAGAGGACTTAACAAGATTGATGATTCCTATGATGTCTCCAATTGCAGAAATTGAGGATATTTCAGCTGCTGCTTCCACAGTAACAGTGGATGCCAGAGTGGGCATATCAACCGGCGTCTCGGCTGCAGATAGGGCAAAAACGATTTTTACTCTAGCCTCCCCTGATTCTAAGCCAACTGACCTCAGAAGACCAGGCCATATATTCCCTCTAAAATACCGAAACGGTGGTGTGCTAAAAAGAGCTGGACATACTGAGGCATCCGTCGATCTT GTCGCGTTGGCTGGCTTGCGCCCTGTGTCTGTCCTGTCAACCGTCATCAACCCAGTGGATGGTTCAATGGCAGGAATGCCAGTGCTGAAACAGATGGCTTTGGAGCATGATATCCCAATTGTTTCAATCGCTGATCTCATCCGGTTAGTATACCTTAAGGTGAACCCTTTGTGAACTTATAGCTTGTTTTCTTCTTTCTTTCGGTGAAACTTCATAGCCAGAATTGTTCTTCTTTAGAATGCACTGCTGAAACTACTCTCCAAGGTGGAACCTGAAATAAGAAAAATGGGAATTACCTAGGAGGAACTAGGTATTTTTAATCATGGAAAATAACCGTGTGAATTTGAAGCTAAGATGCTCGAACCAGAAATGAGATGCCATTGGTCATGGAACTAGGACAGTATATGTTAGGATTTTTCAGATATGCAAACATCTTTTGTGAAATCTCATCTCATTCTTTTGGTCTGATTCAGGTATAGAAGGAAGAGGGAGAAGCTGGTGGAACTGATTGCTGTATCTCGTTTGCCGACGAAATGGGGCCTTTTCCGAGCTTACTGCTACCAATCCAAGCTTGATGGAACCGAGCACATTGCTGTTGCAAAGGTGATATACATTATGCTCTTTTCCCTTCTCCTGGGACTTGAAATTGGGCAGAAAATGCAAATTATGTTCTTGTTTGATGTGTCAGAAGAGCAGATTAACTCATCAAGTCATCGCTCATTTCAGTAAAATTTTCTGCAAATTCCTGCTCTTTTCCCTTCTTCTCCTGGACTAGAAATTGGGCAGAAAAATACAAATTCTGTCCTTGTTCGATTTGTCAGAAATAACAAATTGGCAGAATACTCCATCGTTTCATCGTTTATTTCAGCAAATTTTCTGCAAGTTCTGTTCTTGTTTGATGTGTTAGAAATAACAATTTTTTTTGTTAGATAATGGGTTAGAAATAACAATTGGGCAGCAGAATGATCGATCAGTTCATCGCTCATTTCAGCAAATGCAAAAATTTTGTGGCTGATCCGCAGGGCGACATCGGCGACGGCGAGGACGTCTTGGTGAGGGTCCATTCCGAGTGCCTGACCGGCGACATCCTCGGCTCCGCCCGCTGCGACTGCGGCAACCAGCTGGACCTGGCGATGCAGCTCATCGACAAGGCCGGCCGCGGCGTCCTCGTCTACCTCCGCGGCCACGAGGGCCGCGGCATCGGCCTCGGCCAGAAGCTCCGCGCCTACAACCTCCAGGACGACGGCCACGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCCGTCGACTCCCGCGAGTACGGCATCGGCGCCCAGGTAGTGCACCGACATCAACCATGGCGCATTCTGAATTCAATTTTGCATTTGCATTTGCATTTTGATGATTTTGATCCCATTTCAGATTCTGCGGGACATGGGGGTGCGCACGATGCGGCTGATGACGAACAACCCGGCAAAGTTCGTCGGGCTCAAGGGCTACGGGCTCGCCGTCGTCGGCAGGGTTCCGGTGATCTCCCCCATCACCAAGGAGAACCAGAGGTACCTCGAGACGAAGCGCACCAAGATGGGCCATGTCTACGGCTCCGACCTCCCCGGCAACGTCCCGGAGGAATTCCTCAACCCGGACGACATCGCCGGAGACCAAGACGAAGACGACACCCACAACTGAATGCAACAACAAAATTCACAACCACAGATTCTCCACATCTCATTTTGTGATCAAATTGCATCTCAAACTGCACCGATCTTGTTATACTAGTAACAAATCTTGA]
[+] EMBL C72873 [ GATGATGAAAGCGGTGATAATGAAGGGGATCTTGTCATGGCAGCTACGCTGGCAGACCCAGAATCTATTGCATTCATGATCAGGAATGGTTCTGGGATCATCTCAGTGGGCATGAAGGAAGAGGACTTAACAAGATTGATGATTCCTATGATGTCTCCAATTGCAGAAATTGAGGATATTTCAGCTGCTGCTTCCACAGTAACAGTGGATGCCAGAGTGGGCATATCAACCGGCGTCTCGGCTGCAGATAGGGCAAAAACGATTTTTACTCTAGCCTCCCCTGATTCTAAGCCAACTGACCTCAGAAGACCAGGCCATATATTCCCTCTAAAATACCGAAACGGTGGTGTGCTAAAAAGAGCTGGACATACTGAGGCATCCGTCGATCTTGGTCGCGTTGGCTGGCTTGCG CCTGTGTCTGTCCTGTCAACCGNCATCANCCag ]
consensusID : consensus_12769#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1875 fasta sequence
[AGGAAAAATATAGATAAAGAGAGAGAAAAGAAAACAAGAGAACCGAAAAGAAAAATAACATATAAATAAATAAAGAGAGAAAAAAGAGAAATGGGAAAAAATATAGATAAAGATAGATAAAAGAGAAAGGGGAAACTGAAAAAGGAAAAAAAATTGGGAGAGATTGGATTCGAACCCTGGCCCATGGGGCTATAGCTGCAGCTTGCTACCATTGTGCTATGGGAAAAGTACACGCAAGGTCCCTCAACTTGTCAGCGAGATACAAAATCGTCCCCGAACCGCAAAACCGGACATCCAGCGTCCCCCAACTTACAAAACCGGTCACAGAAGGTCCCTCGGCGGTTTTGACCCCGGTTTTGTCCCACGTGGCGGCTGACTCAGCGTGGGACCCACGTGGGCCCCACAGGTCATGGAGACCATGTCAGCACCCTCTCTCTTTTTCTCCTCTCTCTCTCTCCTTCCTTCCTCTCGCTCTCTGCTCTCGCACAGGCGGCGGCGCGCGCGGCCGGAGGGTGGTGCGGCCGGCGACGGCAACTCCCCGGTGGCGGCGCGCGGGCTCAGGGCGCCGCGAGCTCGCCGGCCTCCTCGTCCCCCTCGTGCGGTCGGTGATGGCGGACGAGCGACGAGAAGCAGGCGGTGCGACGCCCCCGCCGCGTACAGTGGCGCGGTGACCGTGGCCGCCATCGCCTATCAGAGGAGACCTCCGCTCGCGCCCGGAGCCGCCGACGACGATGAGGCCGAGCGGCGTGGAGTCGTCGGCGCCGCCGCTCCCCATCCGCAGCCGCGCTCACCTGCCGCCGCCGAGCTTGTTGTCCCGTGTCTCCGCCGTCGCGTCACCGCCCAGCATGAACCTCACACTCGCGCTCGCGTTCGCCGGGTGGGGAGCCGGCCGGTCGATCTCCTCTCCGCCGCTCCTTCCCCGTCGGCCGCGCCGCCCGGAGATCCTCGGCGTCGAGGCGGCCGCGGCGGAGACGGCCTCCCGCTCCCGCTGCCGCCGCGGCTCCTTGCTGGCTGCAAGACGACGACGGATGATGCGACGGCGCGGCGCCGTCGAATCCTCTGAGCAGCTTGTCGATTCCTTCACGCACCGCAGCGTGGTGTGGAACGCGGCGGCGTCAGGGACAAGCCGCAGGATCTTGTCGGCCACGCGGACGCCGTTGAGGCTGCGCACCGTGGCGAGGTCAAGGCCGCGCCCGTCGCCGCCGCCTTGCTCCCCTGCTCCCGCGTTGTCGCCGCCGACACCTTGCTCCCCTGGTCGCATGGCCACCGCACCTACAACCTCCTGGACGACGGCCATGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCTGTCGACTCCCGCGAGTACGGCATCGGCGCCCAGGTAGCAAAGTTCGTCGGGCTCAAGGGCTACAGGCTCGCCGTCGTCGGCAGGGTTCCGGGCTCCCCGCGCCTCCGCCGTGCTTCCCCACTACGGCCGCCGCCGCCGCTGTCGCCGTCGTGGTGCCGCCCTCCTCCTCTCCTGCTCGCCCCGGCTAGCTTTGCAGATAAGTGAGAGAGAGAGATGAGGAAGGGAGAGGAAGGGAAAGAGAAGAGAGAGAGGAGGCTGACGTGGTCTCCATGACATGTGGGGCCCACGTGGGTCCCACGCTGAGTCAGCCACCACGTGGGACAAAACCGGGGTGAAAACCGCCGAGGGACCTTTTATGACCGGTTTTGTAAGTTGGGGGATGCCGGATGTCCGGTTTTGCGGTTTAGTGACGATTTTGTATCTCGATGACAAGTTGAGGGACCTTGCGTGTACTTTTCCCTTGTGCTATAGGTGTCTCATTGAAAAAGGTTGCCTTCACATTGATTTAGATCGTCAAGACCTCAGCGCCAACCTATTTGGCG]
[+] EMBL CB646623 [AGGAAAAATATAGATAAAGAGAGAGAAAAGAAAACAAGAGAACCGAAAAGAAAAATAACATATAAATAAATAAAGAGAGAAAAAAGAGAAATGGGAAAAAATATAGATAAAGATAGATAAAAGAGAAAGGGGAAACTGAAAAAGGAAAAAAAATTGGGAGAGATTGGATTCGAACCCTGGCCCATGGGGCTATAGCTGCAGCTTGCTACCATTGTGCTATGGGAAAAGTACACGCAAGGTCCCTCAACTTGTCAGCGAGATACAAAATCGTCCCCGAACCGCAAAACCGGACATCCAGCGTCCCCCAACTTACAAAACCGGTCACAGAAGGTCCCTCGGCGGTTTTGACCCCGGTTTTGTCCCACGTGGCGGCTGACTCAGCGTGGGACCCACGTGGGCCCCACAGGTCATGGAGACCATGTCAGCACCCTCTCTCTTTTTCTCCTCTCTCTCTCTCCTTCCTTCCTCTCGCTCTCTGCTCTCGCACAGGCGGCGGCGCGCGCGGCCGGAGGGTGGTGCGGCCGGCGACGGCAACTCCCCGGTGGCGGCGCGCGGGCTCAGGGCGCCGCGAGCTCGCCGGCCTCCTCGTCCCCCTCGTGCGGTCGGTGATGGCGGACGAGCGACGAGAAGCAGGCGGTGCGACGCCCCCGCCGCGTACAGTGGCGCGGTGACCGTGGCCGCCATCGCCTATCAGAGGAGACCTCCGCTCGCGCCC ]
[+] EMBL CB646704 [AGGAAAAATATAGATAAAGAGAGAGAAAAGAAACCATGAGAACCGAAAAGAAAAATAACATATAAATAAATAAAGAGAGAAAAAAGAGAAATGGGAAAAAATATAGATAAAGATAGATAAAAGAGAAAGGGGAAACTGAAAAAGGAAAAAAAATTGGGAGAGATTGGATTCGAACCCTGGCCCATGGGGCTATAGCTGCAGCTTGCTACCATTGTGCTATGGGAAAAGTACACGCAAGGTCCCTCAACTTGTCAGCGAGATACAAAATCGTCCCCGAACCGCAAAACCGGACATCCAGCGTCCCCCAACTTACAAAACCGGTCACAGAAGGTCCCTCGGCGGTTTTGACCCCGGTTTTGTCCCACGTGGCGGCTGACTCAGCGTGGGACCCACGTGGGCCCCACAGGTCATGGAGACCATGTCAGCACCCTCTCTCTTTTTCTCCTCTCTCTCTCTCCTTCCTTCCTCTCGCTCTCTGCTCTCGCACAGGCGGCGGCGCGCGCGGCCGGAGGGTGGTGCGGCCGGCGACGGCAACTCCCCGGTGGCGGCGCGCGGGCTCAGGGCGCCGCGAGCTCGCCGGCCTCCTCGTCCCCCTCGTGCGGTCGGTGATGGCGGACGAGCGACGAGAAGCAGGCGGTGCGACCCCCCCGCCGCGTACAGTGGCGCGGAGACCGTGGCCcc ]
[-] EMBL AK068568 [ CCTGGCCCATGGGGCTATAGCTGCAGCTTGCTACCATTGTGCTATGGGAAAAGTACACGCAAGGTCCCTCAACTTGTCAGCGAGATACAAAATCGTCCCCGAACCGCAAAACCGGACATCCAGCGTCCCCCAACTTACAAAACCGGTCACAGAAGGTCCCTCGGCGGTTTTGACCCCGGTTTTGTCCCACGTGGCGGCTGACTCAGCGTGGGACCCACGTGGGCCCCACAGGTCATGGAGACCATGTCAGCACCCTCTCTCTTTTTCTCCTCTCTCTCTCTCCTTCCTTCCTCTCGCTCTCTGCTCTCGCACAGGCGGCGGCGCGCGCGGCCGGAGGGTGGTGCGGCCGGCGACGGCAACTCCCCGGTGGCGGCGCGCGGGCTCAGGGCGCCGCGAGCTCGCCGGCCTCCTCGTCCCCCTCGTGCGGTCGGTGATGGCGGACGAGCGACGAGAAGCAGGCGGTGCGACGCCCCCGCCGCGTACAGTGGCGCGGTGACCGTGGCCGCCATCGCCTATCAGAGGAGACCTCCGCTCGCGCCCGGAGCCGCCGACGACGATGAGGCCGAGCGGCGTGGAGTCGTCGGCGCCGCCGCTCCCCATCCGCAGCCGCGCTCACCTGCCGCCGCCGAGCTTGTTGTCCCGTGTCTCCGCCGTCGCGACACCGCCCAGCATGAACCTCACACTCGCGCTCGCGTTCGCCGGGTGGGGAGCCGGCCGGTCGATCTCCTCTCCGCCGCTCCTTCCCCGTCGGCCGCGCCGCCCGGAGATCCTCGGCGTCGAGGCGGCCGCGGCGGAGACGGCCTCCCGCTCCCGCTGCCGCCGCGGCTCCTTGCTGGCTGCAAGACGACGACGGATGATGCGACGGCGCGGCGCCGTCGAATCCTCTGAGCAGCTTGTCGATTCCTTCACGCACCGCAGCGTGGTGTGGAACGCGGCGGCGTCAGGGACAAACCGCAGGATCTTGTCGGCCACGCGGACGCCGTTGAGGCTGCGCACCGTGGCGAGGTCAAGGCCGCGCCCGTCGCCGCCGCCTTGCTCCCCTGCTCCCGCGTTGTCGCCGCCGACACCTTGCTCCCCTGGTCGCATGGCCACCGCACCTACAACCTCCTGGACGACGGCCATGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCTGTCGACTCCCGCGAGTACGGCATCGGCGCCCAGGTAGCAAAGTTCGTCGGGCTCAAGGGCTACAGGCTCGCCGTCGTCGGCAGGGTTCCGGGCTCCCCGCGCCTCCGCCGTGCTTCCCCACTACGGCCGCCGCCGCCGCTGTCGCCGTCGTGGTGCCGCCCTCCTCCTCTCCTGCTCGCCCCGGCTAGCTTTGCAGATAAGTGA ]
[+] EMBL AK100220 [ ACAGGCGGCGGCGCGCGCGGCCGGAGGGTGGTGCGGCCGGCGACGGCAACTCCCCGGTGGCGGCGCGCGGGCTCAGGGCGCCGCGAGCTCGCCGGCCTCCTCGTCCCCCTCGTGCGGTCGGTGATGGCGGACGAGCGACGAGAAGCAGGCGGTGCGACGCCCCCGCCGCGTACAGTGGCGCGGTGACCGTGGCCGCCATCGCCTATCAGAGGAGACCTCCGCTCGCGCCCGGAGCCGCCGACGACGATGAGGCCGAGCGGCGTGGAGTCGTCGGCGCCGCCGCTCCCCATCCGCAGCCGCGCTCACCTGCCGCCGCCGAGCTTGTTGTCCCGTGTCTCCGCCGTCGCGTCACCGCCCAGCATGAACCTCACACTCGCGCTCGCGTTCGCCGGGTGGGGAGCCGGCCGGTCGATCTCCTCTCCGCCGCTCCTTCCCCGTCGGCCGCGCCGCCCGGAGATCCTCGGCGTCGAGGCGGCCGCGGCGGAGACGGCCTCCCGCTCCCGCTGCCGCCGCGGCTCCTTGCTGGCTGCAAGACGACGACGGATGATGCGACGGCGCGGCGCCGTCGAATCCTCTGAGCAGCTTGTCGATTCCTTCACGCACCGCAGCGTGGTGTGGAACGCGGCGGCGTCAGGGACAAGCCGCAGGATCTTGTCGGCCACGCGGACGCCGTTGAGGCTGCGCACCGTGGCGAGGTCAAGGCCGCGCCCGTCGCCGCCGCCTTGCTCCCCTGCTCCCGCGTTGTCGCCGCCGACACCTTGCTCCCCTGGTCGCATGGCCACCGCACCTACAACCTCCTGGACGACGGCCATGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCTGTCGACTCCCGCGAGTACGGCATCGGCGCCCAGGTAGCAAAGTTCGTCGGGCTCAAGGGCTACAGGCTCGCCGTCGTCGGCAGGGTTCCGGGCTCCCCGCGCCTCCGCCGTGCTTCCCCACTACGGCCGCCGCCGCCGCTGTCGCCGTCGTGGTGCCGCCCTCCTCCTCTCCTGCTCGCCCCGGCTAGCTTTGCAGATAAGTGAGAGAGAGAGATGAGGAAGGGAGAGGAAGGGAAAGAGAAGAGAGAGAGGAGGCTGACGTGGTCTCCATGACATGTGGGGCCCACGTGGGTCCCACGCTGAGTCAGCCACCACGTGGGACAAAACCGGGGTGAAAACCGCCGAGGGACCTTTTATGACCGGTTTTGTAAGTTGGGGGATGCCGGATGTCCGGTTTTGCGGTTTAGTGACGATTTTGTATCTCGATGACAAGTTGAGGGACCTTGCGTGTACTTTTCCCTTGTGCTATAGGTGTCTCATTGAAAAAGGTTGCCTTCACATTGATTTAGATCGTCAAGACCTCAGCGCCAACCTATTTGGCG]
[-] EMBL CB646622 [ AGCCGCGCTCACCTGCCGCCGCCGAGCTTGTTGTCCCGTGTCTCCGCCGTCGCGTCACCGCCCAGCATGAACCTCACACTCGCGCTCGCGTTCGCCGGGTGGGGAGCCGGCCGGTCGATCTCCTCTCCGCCGCTCCTTCCCCGTCGGCCGCGCCGCCCGGAGATCCTCGGCGTCGAGGCGGCCGCGGCGGAGACGGCCTCCCGCTCCCGCTGCCGCCGCGGCTCCTTGCTGGCTGCAAGACGACGACGGATGATGCGACGGCGCGGCGCCGTCGAATCCTCTGAGCAGCTTGTCGATTCCTTCACGCACCGCAGCGTGGTGTGGAACGCGGCGGCGTCAGGGACAAGCCGCAGGATCTTGTCGGCCACGCGGACGCCGTTGAGGCTGCGCACCGTGGCGAGGTCAAGGCCGCGCCCGTCGCCGCCGCCTTGCTCCCCTGCTCCCGCGTTGTCGCCGCCGACACCTTGCTCCCCTGGTCGCATGGCCACCGCACCTACAACCTCCTGGACGACGGCCATGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCTGTCGACTCCCGCGAGTACGGCATCGGCGCCCAGGTAGCAAAGTTCGTCGGGCTCAAGGGCTACAGGCTCGCCGTCGTCGGCAGGGTTCCGGGCTCCCCGCGCCTCCGCCGTGCTTCCCCACTACGGCCGCCGCCGC ]
[-] EMBL CB646703 [ ACCTGCCGCCGCCGAGCTTGTTGTCCCGTGTCTCCGCCGTCGCGTCACCGCCCAGCATGAACCTCACACTCGCGCTCGCGTTCGCCGGGTGGGGAGCCGGCCGGTCGATCTCCTCTCCGCCGCTCCTTCCCCGTCGGCCGCGCCGCCCGGAGATCCTCGGCGTCGAGGCGGCCGCGGCGGAGACGGCCTCCCGCTCCCGCTGCCGCCGCGGCTCCTTGCTGGCTGCAAGACGACGACGGATGATGCGACGGCGCGGCGCCGTCGAATCCTCTGAGCAGCTTGTCGATTCCTTCACGCACCGCAGCGTGGTGTGGAACGCGGCGGCGTCAGGGACAAGCCGCAGGATCTTGTCGGCCACGCGGACGCCGTTGAGGCTGCGCACCGTGGCGAGGTCAAGGCCGCGCCCGTCGCCGCCGCCTTGCTCCCCTGCTCCCGCGTTGTCGCCGCCGACACCTTGCTCCCCTGGTCGCATGGCCACCGCACCTACAACCTCCTGGACGACGGCCATGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCTGTCGACTCCCGCGAGTACGGCATCGGCGCCCAGGTAGCAAAGTTCGTCGGGCTCAAGGGCTACAGGCTCGCCGTCGTCGGCAGGGTTCCGGGCTCCCCGCGCCTCCGCCGTGCTTCCCCACTACGGCCACGGCCGC ]
consensusID : consensus_12769#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1753 fasta sequence
[GGATCGGTTTTACCGGGATCACCAAATGGACCGTGTTCTTCTGAGCTCTCAATTGTCATCACAAACGGTTGTTAACACAAGGGTTCAACAAGGAAGCGGTGGTATCAACAGCATAGGATTTGCTGTTATCAGAAAGGGGAGCTTAAAATTGAGATGTTATGCAATTGGTGGACTTGGGGGAGGAGAGAATTTGAATGATCCTTTAAAGGAAAGCAATAATGGACCTGTTTTGCAAGGATTCAATGGATCTAGTGCTTCCTTTCGGACTGTTGGTGCTAAAATCACTCAGGAAACTGGTGATTTCTTTGTTAGCGATGCAGAGGGTGACCCAGACAAACCAACTGATGGTTTTTCCTCTATTGATGAGGCTATAGGCGCATTGCATGAAGGAAAGTTTGTTATTGCTGTAGATGATGAAAGCGGTGATAATGAAGGGGATCTTGTCATGGCAGCTACGCTGGCAGACCCAGAATCTATTGCATTCATGATCAGGAATGGTTCTGGGATCATCTCAGTGGGCATGAAGGAAGAGGACTTAACAAGATTGATGATTCCTATGATGTCTCCAATTGCAGAAATTGAGGATATTTCAGCTGCTGCTTCCACAGTAACAGTGGATGCCAGAGTGGGCATATCAACCGGCGTCTCGGCTGCAGATAGGGCAAAAACGATTTTTACTCTAACCTCCCCTGATTCTAAGCCAACTGACCTCAGAAGACCAGGCCATATATTCCCTCTAAAATACCGAAACGGTGGTGTGCTAAAAAGAGCTGGACATACTGAGGCATCCGTCGATCTTGTCGCGTTGGCTGGCTTGCGCCCTGTGTCTGTCCTGTCAACCGTCATCAACCCAGTGGATGGTTCAATGGCAGGAATGCCAGTGCTGAAACAGATGGCTTTGGAGCATGATATCCCAATTGTTTCAATCGCTGATCTCATCCGGTATAGAAGGAAGAGGGAGAAGCTGGTGGAACTGATTGCTGTATCTCGTTTGCCGACGAAATGGGGCCTTTTCCGAGCTTACTGCTACCAATCCAAGCTTGATGGAACCGAGCACATTGCTGTTGCAAAGGGCGACATCGGCGACGGCGAGGACGTCTTGGTGAGGGTCCATTCCGAGTGCCTGACCGGCGACATCCTCGGCTCCGCCCGCTGCGACTGCGGCAACCAGCTGGACCTGGCGATGCAGCTCATCGACAAGGCCGGCCGCGGCGTCCTCGTCTACCTCCGCGGCCACGAGGGCCGCGGCATCGGCCTCGGCCAGAAGCTCCGCGCCTACAACCTCCAGGACGACGGCCACGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCCGTCGACTCCCGCGAGTACGGCATCGGCGCCCAGATTCTGCGGGACATGGGGGTGCGCACGATGCGGCTGATGACGAACAACCCGGCAAAGTTCGTCGGGCTCAAGGGCTACGGGCTCGCCGTCGTCGGCAGGGTTCCGGTGATCTCCCCCATCACCAAGGAGAACCAGAGGTACCTCGAGACGAAGCGCACCAAGATGGGCCATGTCTACGGCTCCGACCTCCCCGGCAACGTCCCGGAGGAATTCCTCAACCCGGACGACATCGCCGGAGACCAAGACGAAGACGACACCCACAACTGAATGCAACAACAAAATTCACAACCACAGATTCTCCACATCTCATTTTGTGATCAAATTGCATCTCAAACTGCACCGATCTTGTTATACTAGTAACAAATCTTGATTTGGAACCAAAAA]
[+] EMBL AK072931 [GGATCGGTTTTACCGGGATCACCAAATGGACCGTGTTCTTCTGAGCTCTCAATTGTCATCACAAACGGTTGTTAACACAAGGGTTCAACAAGGAAGCGGTGGTATCAACAGCATAGGATTTGCTGTTATCAGAAAGGGGAGCTTAAAATTGAGATGTTATGCAATTGGTGGACTTGGGGGAGGAGAGAATTTGAATGATCCTTTAAAGGAAAGCAATAATGGACCTGTTTTGCAAGGATTCAATGGATCTAGTGCTTCCTTTCGGACTGTTGGTGCTAAAATCACTCAGGAAACTGGTGATTTCTTTGTTAGCGATGCAGAGGGTGACCCAGACAAACCAACTGATGGTTTTTCCTCTATTGATGAGGCTATAGGCGCATTGCATGAAGGAAAGTTTGTTATTGCTGTAGATGATGAAAGCGGTGATAATGAAGGGGATCTTGTCATGGCAGCTACGCTGGCAGACCCAGAATCTATTGCATTCATGATCAGGAATGGTTCTGGGATCATCTCAGTGGGCATGAAGGAAGAGGACTTAACAAGATTGATGATTCCTATGATGTCTCCAATTGCAGAAATTGAGGATATTTCAGCTGCTGCTTCCACAGTAACAGTGGATGCCAGAGTGGGCATATCAACCGGCGTCTCGGCTGCAGATAGGGCAAAAACGATTTTTACTCTAACCTCCCCTGATTCTAAGCCAACTGACCTCAGAAGACCAGGCCATATATTCCCTCTAAAATACCGAAACGGTGGTGTGCTAAAAAGAGCTGGACATACTGAGGCATCCGTCGATCTTGTCGCGTTGGCTGGCTTGCGCCCTGTGTCTGTCCTGTCAACCGTCATCAACCCAGTGGATGGTTCAATGGCAGGAATGCCAGTGCTGAAACAGATGGCTTTGGAGCATGATATCCCAATTGTTTCAATCGCTGATCTCATCCGGTATAGAAGGAAGAGGGAGAAGCTGGTGGAACTGATTGCTGTATCTCGTTTGCCGACGAAATGGGGCCTTTTCCGAGCTTACTGCTACCAATCCAAGCTTGATGGAACCGAGCACATTGCTGTTGCAAAGGGCGACATCGGCGACGGCGAGGACGTCTTGGTGAGGGTCCATTCCGAGTGCCTGACCGGCGACATCCTCGGCTCCGCCCGCTGCGACTGCGGCAACCAGCTGGACCTGGCGATGCAGCTCATCGACAAGGCCGGCCGCGGCGTCCTCGTCTACCTCCGCGGCCACGAGGGCCGCGGCATCGGCCTCGGCCAGAAGCTCCGCGCCTACAACCTCCAGGACGACGGCCACGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCCGTCGACTCCCGCGAGTACGGCATCGGCGCCCAGATTCTGCGGGACATGGGGGTGCGCACGATGCGGCTGATGACGAACAACCCGGCAAAGTTCGTCGGGCTCAAGGGCTACGGGCTCGCCGTCGTCGGCAGGGTTCCGGTGATCTCCCCCATCACCAAGGAGAACCAGAGGTACCTCGAGACGAAGCGCACCAAGATGGGCCATGTCTACGGCTCCGACCTCCCCGGCAACGTCCCGGAGGAATTCCTCAACCCGGACGACATCGCCGGAGACCAAGACGAAGACGACACCCACAACTGAATGCAACAACAAAATTCACAACCACAGATTCTCCACATCTCATTTTGTGATCAAATTGCATCTCAAACTGCACCGATCTTGTTATACTAGTAACAAATCTTGATTT ]
[+] EMBL AY224441 [ CGGACTGTTGGTGCTAAAATCACTCAGGAAACTGGTGATTTCTTTGTTAGCGATGCAGAGGGTGACCCAGACAAACCAACTGATGGTTTTTCCTCTATTGATGAGGCTATAGGCGCATTGCATGAAGGAAAGTTTGTTATTGCTGTAGATGATGAAAGCGGTGATAATGAAGGGGATCTTGTCATGGCAGCTACGCTGGCAGACCCAGAATCTATTGCATTCATGATCAGGAATGGTTCTGGGATCATCTCAGTGGGCATGAAGGAAGAGGACTTAACAAGATTGATGATTCCTATGATGTCTCCAATTGCAGAAATTGAGGATATTTCAGCTGCTGCTTCCACAGTAACAGTGGATGCCAGAGTGGGCATATCAACCGGCGTCTCGGCTGCAGATAGGGCAAAAACGATTTTTACTCTAGCCTCCCCTGATTCTAAGCCAACTGACCTCAGAAGACCAGGCCATATATTCCCTCTAAAATACCGAAACGGTGGTGTGCTAAAAAGAGCTGGACATACTGAGGCATCCGTCGATCTTGTCGCGTTGGCTGGCTTGCGCCCTGTGTCTGTCCTGTCAACCGTCATCAACCCAGTGGATGGTTCAATGGCAGGAATGCCAGTGCTGAAACAGATGGCTTTGGAGCATGATATCCCAATTGTTTCAATCGCTGATCTCATCCGGTATAGAAGGAAGAGGGAGAAGCTGGTGGAACTGATTGCTGTATCTCGTTTGCCGACGAAATGGGGCCTTTTCCGAGCTTACTGCTACCAATCCAAGCTTGATGGAACCGAGCACATTGCTGTTGCAAAGGGCGACATCGGCGACGGCGAGGACGTCTTGGTGAGGGTCCATTCCGAGTGCCTGACCGGCGACATCCTCGGCTCCGCCCGCTGCGACTGCGGCAACCAGCTGGACCTGGCGATGCAGCTCATCGACAAGGCCGGCCGCGGCGTCCTCGTCTACCTCCGCGGCCACGAGGGCCGCGGCATCGGCCTCGGCCAGAAGCTCCGCGCCTACAACCTCCAGGACGACGGCCACGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCCGTCGACTCCCGCGAGTACGGCATCGGCGCCCAGATTCTGCGGGACATGGGGGTGCGCACGATGCGGCTGATGACGAACAACCCGGCAAAGTTCGTCGGGCTCAAGGGCTACGGGCTCGCCGTCGTCGGCAGGGTTCCGGTGATCTCCCCCATCACCAAGGAGAACCAGAGGTACCTCGAGACGAAGCGCACCAAGATGGGCCATGTCTACGGCTCCGACCTCCCCGGCAACGTCCCGGAGGAATTCCTCAACCCGGACGACATCGCCGGAGACCAAGACGAAGACGACAC ]
[+] EMBL AU101184 [ TACGGCATCGGCGCCCAGATTCTGCGGGACATGGGGGTGCGCACGATGCGNCTGATGACGAACAACCCGGNAAAGTTCGTCGGGCTCAAGGGCTACGGGNTCGCCGTCGTCGGCAGGGTTCCGGTGATCTCCCCNATCACCAAGGAGAACCAGAGGTACCTCGAGACGAAGCGCACCAAGATGGGCCATGTCTACGGCTCCGACCTCCCCGGCAACGTCCCGGAGGAATTCCTCAACCCGGACGACATCGCCGGAGACCAAGACGAAGACGACACCCACAACTGAATGCAACAACAAAATTCACAACCACAGATTCTCCACATCTCATTTTGTGATCAAATTGCATCTCAAACTGCACCGATCTTGTTATACTAGTAACAAATCTTGATTTGGAACCAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12769#0 -----GGTTTTACCGGGATCACCAAATGGACC-GTGTTCTTCTGAGCTCTCAATTGTCAT 54
consensus_12769#2 GGATCGGTTTTACCGGGATCACCAAATGGACC-GTGTTCTTCTGAGCTCTCAATTGTCAT 59
consensus_12769#1 ----AGGAAAAATATAGATAAAGAGAGAGAAAAGAAAACAAGAGAACCGAAAAGAAAAAT 56
** * *** * * * ** * * ** * ** **
consensus_12769#0 CACAAACGGTTGTTAACACAAGGGTTCAACAAGGAAGCGGTGGTATCAACAGCATAGGAT 114
consensus_12769#2 CACAAACGGTTGTTAACACAAGGGTTCAACAAGGAAGCGGTGGTATCAACAGCATAGGAT 119
consensus_12769#1 AACATATAA--ATAAATAAAGAGAGAAAAAAGAGAAATGGGAAAAAATATAG-ATAAAGA 113
*** * * ** * * * ** * *** ** * * ** ***
consensus_12769#0 TTGCTGTTATCAGAAAGGGGAGCTTAAAATTGAGATGTTATGCAATTGGTGGACTTGGGG 174
consensus_12769#2 TTGCTGTTATCAGAAAGGGGAGCTTAAAATTGAGATGTTATGCAATTGGTGGACTTGGGG 179
consensus_12769#1 TAGATAAAAGAGAAAGGGGAAACTGAAAAAGGAAAAA-----AAATTGGGAGAGATTGGA 168
* * * * ** *** * ** **** ** * ****** ** * **
consensus_12769#0 GAGGAGAGAATTTGAATGATCCTTTAAAGGAAAGCAATAATGGACCTGTTTTGCAAGGAT 234
consensus_12769#2 GAGGAGAGAATTTGAATGATCCTTTAAAGGAAAGCAATAATGGACCTGTTTTGCAAGGAT 239
consensus_12769#1 TTCGAACCCTGGCCCATGGGGCTATAGCTGCAGCTTGCTACCATTGTGCTATGGGAAAAG 228
** *** ** ** * * * ** * ** * *
consensus_12769#0 TCAATGGATCTAGTGCTTCCTTTCGGACTGTTGGTGCTAAAATCACTCAGGAAACTGGTG 294
consensus_12769#2 TCAATGGATCTAGTGCTTCCTTTCGGACTGTTGGTGCTAAAATCACTCAGGAAACTGGTG 299
consensus_12769#1 TACACGCA---AGGTCCCTCAACTTGTCAGCGAGATACAAAATCGTCCCCGAACCGCAAA 285
* * * * ** * * * * * * ****** * *** *
consensus_12769#0 ATTTCTTTGTTAGCGATGCAGAGGGTGACCCAGACAAACCAACTGATGGTTTTTCCTCTA 354
consensus_12769#2 ATTTCTTTGTTAGCGATGCAGAGGGTGACCCAGACAAACCAACTGATGGTTTTTCCTCTA 359
consensus_12769#1 ACCGGACATCCAGCGTCCCCCAACTTA--CAAAACCGGTCA-CAGAAGGTCCCTCGGCGG 342
* **** * * * * * ** ** * ** *** ** *
consensus_12769#0 TTGATGAGGCTATAGGCGCATTGCATGAAGGAAAG----------------ATGATGAAA 398
consensus_12769#2 TTGATGAGGCTATAGGCGCATTGCATGAAGGAAAGTTTGTTATTGCTGTAGATGATGAAA 419
consensus_12769#1 TTT-TGACCCCGGTTTTGTCCCACGTGGCGGCTGACTCAGCGT-GGGACCCACGTGGGCC 400
** *** * * * ** ** * * *
consensus_12769#0 GCGGTGATAATGAAGGGGATCTTGTCATGGCAGCTACGCTGGCAGACCCAGAATCTATTG 458
consensus_12769#2 GCGGTGATAATGAAGGGGATCTTGTCATGGCAGCTACGCTGGCAGACCCAGAATCTATTG 479
consensus_12769#1 CCACAGGTCATGGAGACCATGTCAGCACCCTCTCTCTTTTTCTCCTCTCTCTCTCTCCTT 460
* * * *** ** ** * ** ** * * * *** *
consensus_12769#0 CATTCATGATCAGGAATGGTTCTGGGATCATCT-CAGTGGGCATGAAGGAAGAG-GACTT 516
consensus_12769#2 CATTCATGATCAGGAATGGTTCTGGGATCATCT-CAGTGGGCATGAAGGAAGAG-GACTT 537
consensus_12769#1 CCTTCCTC-TCGCTCTCTGCTCTCGCACAGGCGGCGGCGCGCGCGGCCGGAGGGTGGTGC 519
* *** * ** * *** * * * * * * ** * * ** * *
consensus_12769#0 AACAAG-ATTGATGATTCCTATGATGTCTCCAATTGCAGAAATTGAGGATATTTC-AGCT 574
consensus_12769#2 AACAAG-ATTGATGATTCCTATGATGTCTCCAATTGCAGAAATTGAGGATATTTC-AGCT 595
consensus_12769#1 GGCCGGCGACGGCAACTCCC-CGGTGGCGGC----GCGCGGGCTCAGGGCGCCGCGAGCT 574
* * * * *** * ** * * ** * *** * ****
consensus_12769#0 -GCTGCTTCCACAGTAACAGTGGATGCCAGAGTGGGCATATCAACCGGCGTCTCGGCTGC 633
consensus_12769#2 -GCTGCTTCCACAGTAACAGTGGATGCCAGAGTGGGCATATCAACCGGCGTCTCGGCTGC 654
consensus_12769#1 CGCCGGCCTCCTCGTCCCCCTCG-TGC--GGTCGGTGATGGCGGACGAGCGACGAGAAGC 631
** * * ** * * * *** * ** ** * ** * **
consensus_12769#0 AGATAGGGCAAAAACGATTTTTACTCTAGCCTCCCCTGATTCTAAGCCAACTGACCTCAG 693
consensus_12769#2 AGATAGGGCAAAAACGATTTTTACTCTAACCTCCCCTGATTCTAAGCCAACTGACCTCAG 714
consensus_12769#1 AGGCGGTGCGACGCCCCCGCCGCGTACAGTGGCGCGGTGACCGTGGCCGCCATCGCCTAT 691
** * ** * * * * * * * *** * * *
consensus_12769#0 AAGACCAGGCCATATATTCCCTCTAAAATACCGAAACGGTGGTGTGCTAAAAAGAGCTGG 753
consensus_12769#2 AAGACCAGGCCATATATTCCCTCTAAAATACCGAAACGGTGGTGTGCTAAAAAGAGCTGG 774
consensus_12769#1 CAGAGGAGACC-TCCGCTCGCGCCCGGAGCCGCCGACGACGATGAGGCCGAGCGGCGTGG 750
*** ** ** * ** * * * * *** * ** * * * ***
consensus_12769#0 ACATACTGAGGCATCCGTCGATCTT-----GTCGCGTTGGCTGGCTTGCGCCCTGTGT-C 807
consensus_12769#2 ACATACTGAGGCATCCGTCGATCTT-----GTCGCGTTGGCTGGCTTGCGCCCTGTGT-C 828
consensus_12769#1 AGTCGTCGGCGCCGCCGCTCCCCATCCGCAGCCGCGCTCACCTGCCGCCGCCGAGCTTGT 810
* * ** *** * * * **** * * ** **** * *
consensus_12769#0 TGTCCTGT-CAACCGTCATCAACCCAGTGGATGGTTCAATGGCAGGAATGCCAGTGCT-G 865
consensus_12769#2 TGTCCTGT-CAACCGTCATCAACCCAGTGGATGGTTCAATGGCAGGAATGCCAGTGCT-G 886
consensus_12769#1 TGTCCCGTGTCTCCGCCGTCGCGTCACCGCCCAGC---ATGAACCTCACACTCGCGCTCG 867
***** ** *** * ** ** * * *** * * * *** *
consensus_12769#0 AAACAGATGGCTTTGGAGCATGATATCCCAATTGTTTCAATCGCTGATCTCATCCGGTTA 925
consensus_12769#2 AAACAGATGGCTTTGGAGCATGATATCCCAATTGTTTCAATCGCTGATCTCATCCGGT-- 944
consensus_12769#1 CGTTCGCCGGGTGGGGAGCCGGCCGGTCGATCTCCTCT--CCGCCGCTCCTTCCCCGTCG 925
* ** * ***** * * * * * *** * ** ** **
consensus_12769#0 GTATACCTTAAGGTGAACCCTTTGTGAACTTATAGCTTGTTTTCTTCTTTCTTTCGGTGA 985
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 G----------------------------------------------------------- 926
consensus_12769#0 AACTTCATAGCCAGAATTGTTCTTCTTTAGAATGCACTGCTGAAACTACTCTCCAAGGTG 1045
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 ------------------------------------------------------------
consensus_12769#0 GAACCTGAAATAAGAAAAATGGGAATTACCTAGGAGGAACTAGGTATTTTTAATCATGGA 1105
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 ------------------------------------------------------------
consensus_12769#0 AAATAACCGTGTGAATTTGAAGCTAAGATGCTCGAACCAGAAATGAGATGCCATTGGTCA 1165
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 ------------------------------------------------------------
consensus_12769#0 TGGAACTAGGACAGTATATGTTAGGATTTTTCAGATATGCAAACATCTTTTGTGAAATCT 1225
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 ------------------------------------------------------------
consensus_12769#0 CATCTCATTCTTTTGGTCTGATTCAGGTATAGAAGGAAGAGGGAGAAGCTGGTGGAACTG 1285
consensus_12769#2 ----------------------------ATAGAAGGAAGAGGGAGAAGCTGGTGGAACTG 976
consensus_12769#1 -----------------CCGCGCCGCCCGGAGATCCTCGGCGTCGAGGCGGCCGCGGCGG 969
*** * * ** ** * * * *
consensus_12769#0 ATTGCTGTATCTCGTTTGCCGACGAAATGGGGCCTTTTCCGAGCTTACTGCTACCAATCC 1345
consensus_12769#2 ATTGCTGTATCTCGTTTGCCGACGAAATGGGGCCTTTTCCGAGCTTACTGCTACCAATCC 1036
consensus_12769#1 AG-ACGGCCTCCCGCTC-CCGCTGCCGCCGCGGCTCCTT---GCTGGCTGCAAGACGACG 1024
* * * ** ** * *** * * * ** * *** **** * *
consensus_12769#0 AAGCTTGATGGAACCGAGCACATTGCTGTTGCAAAGGTGATATACATTATGCTCTTTTCC 1405
consensus_12769#2 AAGCTTGATGGAACCGAGCACATTGCTGTTGCAAAGG----------------------- 1073
consensus_12769#1 ACGGATGATGCGAC--GGCGCGGCGCCGTCGAATCCTC---------------------- 1060
* * ***** ** ** * ** ** * *
consensus_12769#0 CTTCTCCTGGGACTTGAAATTGGGCAGAAAATGCAAATTATGTTCTTGTTTGATGTGTCA 1465
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 ------------------------------------------------------------
consensus_12769#0 GAAGAGCAGATTAACTCATCAAGTCATCGCTCATTTCAGTAAAATTTTCTGCAAATTCCT 1525
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 ------------------------------------------------------------
consensus_12769#0 GCTCTTTTCCCTTCTTCTCCTGGACTAGAAATTGGGCAGAAAAATACAAATTCTGTCCTT 1585
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 ------------------------------------------------------------
consensus_12769#0 GTTCGATTTGTCAGAAATAACAAATTGGCAGAATACTCCATCGTTTCATCGTTTATTTCA 1645
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 ------------------------------------------------------------
consensus_12769#0 GCAAATTTTCTGCAAGTTCTGTTCTTGTTTGATGTGTTAGAAATAACAATTTTTTTTGTT 1705
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 ------------------------------------------------------------
consensus_12769#0 AGATAATGGGTTAGAAATAACAATTGGGCAGCAGAATGATCGATCAGTTCATCGCTCATT 1765
consensus_12769#2 ------------------------------------------------------------
consensus_12769#1 ----------------------------------------TGAGCAGCTTGTCGATTCCT 1080
consensus_12769#0 TCAGCAAATGCAAAAATTTTGTGGCTGATCCGCAGGGCGACATCGGCGACGGCGAGGACG 1825
consensus_12769#2 ------------------------------------GCGACATCGGCGACGGCGAGGACG 1097
consensus_12769#1 TCAC------------------------------GCACCGCAGCG-TGGTGTGGAACGCG 1109
* ** ** * * ** **
consensus_12769#0 TCTTGGTGAGGGTCCATTCCGAGTGCCTGACCGGCGACATCCTCGGCTCCGCCCGCTGCG 1885
consensus_12769#2 TCTTGGTGAGGGTCCATTCCGAGTGCCTGACCGGCGACATCCTCGGCTCCGCCCGCTGCG 1157
consensus_12769#1 GCGGCGTCAGGGACAAGCCGCAGGATCTTGTCGGCCACGCGGACG-------CCGTTGAG 1162
* ** **** * * * ** ** **** ** ** *** ** *
consensus_12769#0 ACTGCGGCAACCAGCTGGACCTGGCGATGCAGCTCATCGACAAGGCCGGCCGCGGCGTCC 1945
consensus_12769#2 ACTGCGGCAACCAGCTGGACCTGGCGATGCAGCTCATCGACAAGGCCGGCCGCGGCGTCC 1217
consensus_12769#1 GCTGCG-CACCGTGGCGAGGTCAAGGCCGC-GCCCGTCGCC-------GCCGCCTTGCTC 1213
***** ** * * * * ** ** * *** * ***** * *
consensus_12769#0 TCGTCTACCTCCGCGGCCACGAGGGCCGCGGCATCGGCCTCGGC-CAGAAGCTCCGCGCC 2004
consensus_12769#2 TCGTCTACCTCCGCGGCCACGAGGGCCGCGGCATCGGCCTCGGC-CAGAAGCTCCGCGCC 1276
consensus_12769#1 CCCTGCTCCCGCGTTGTCGCCGCCGACACCTTGCTCCCCTGGTCGCATGGCCACCGCACC 1273
* * ** ** * * * * * * *** * * ** * **** **
consensus_12769#0 TACAACCTCCAGGACGACGGCCACGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCC 2064
consensus_12769#2 TACAACCTCCAGGACGACGGCCACGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCC 1336
consensus_12769#1 TACAACCTCCTGGACGACGGCCATGACACCGTCCAGGCCAACGTCGAGCTCGGCCTCGCT 1333
********** ************ ***********************************
consensus_12769#0 GTCGACTCCCGCGAGTACGGCATCGGCGCCCAGGTAGTGCACCGACATCAACCATGGCGC 2124
consensus_12769#2 GTCGACTCCCGCGAGTACGGCATCGGCGCCCAG--------------------------- 1369
consensus_12769#1 GTCGACTCCCGCGAGTACGGCATCGGCGCCCAGGTAG--------CAAAGTTCGTCGGGC 1385
*********************************
consensus_12769#0 ATTCTGAATTCAATTTTGCATTTGCATTTGCATTTTGATGATTTTGATCCCATTTCAGAT 2184
consensus_12769#2 ----------------------------------------------------------AT 1371
consensus_12769#1 TCAAGGGCTACAGGCTCGC------------------------------------CGTCG 1409
consensus_12769#0 TCTGCGGGACATGGGGGTGCGCACGATGCGGCTGATGACGAACAACCCGGCAAAGTTCGT 2244
consensus_12769#2 TCTGCGGGACATGGGGGTGCGCACGATGCGGCTGATGACGAACAACCCGGCAAAGTTCGT 1431
consensus_12769#1 TCGGCAGGGTTCCGGGCTCCCCGCGCCTCCGCCGTGCTTCCCCACTACGGCCGCCGCCGC 1469
** ** ** *** * * * ** * ** * ** **** **
consensus_12769#0 CGGGCTCA-----AGGGCTACGGGCTCGCCGTCGTCGGCAGGGTTCCGGTGATCTCCCCC 2299
consensus_12769#2 CGGGCTCA-----AGGGCTACGGGCTCGCCGTCGTCGGCAGGGTTCCGGTGATCTCCCCC 1486
consensus_12769#1 CGCTGTCGCCGTCGTGGTGCCGCCCTCCTCCTCTCCTGCTCGCCCCGGCTAGCTTTGCAG 1529
** ** ** ** *** * ** * ** * * * * * *
consensus_12769#0 ATCACCAAGGAGAACCAGAGGTACCTCGAGACGAAGCGCACCAAGATGGGCCATGTCTAC 2359
consensus_12769#2 ATCACCAAGGAGAACCAGAGGTACCTCGAGACGAAGCGCACCAAGATGGGCCATGTCTAC 1546
consensus_12769#1 ATAAGTGAGAGAGAGAGATGAGGAAGGGAGAGGAAGGGAAAGAGAAGAGAGAGAGGAGGC 1589
** * ** * * **** **** * * * * * * *
consensus_12769#0 GGCTCCGACCTCCCCGGCA---ACGTCCCGGAGGAATTCCTCAACCCGGACGACATCGCC 2416
consensus_12769#2 GGCTCCGACCTCCCCGGCA---ACGTCCCGGAGGAATTCCTCAACCCGGACGACATCGCC 1603
consensus_12769#1 TGACGTGGTCTCCATGACATGTGGGGCCCACGTGGGTCCCACGCTGAGTCAGCCACCACG 1649
* * **** * ** * *** * * ** * * * ** * *
consensus_12769#0 GGAGACCAAGACGAAGACGACACCCACAACTGAA-TGCAACAACAAAATTCACAACC--A 2473
consensus_12769#2 GGAGACCAAGACGAAGACGACACCCACAACTGAA-TGCAACAACAAAATTCACAACC--A 1660
consensus_12769#1 TGGGACAAAACCGGGGTGAAAACCGCCGAGGGACCTTTTATGACCGGTTTTGTAAGTTGG 1709
* *** ** ** * * *** * * ** * * ** ** **
consensus_12769#0 CAGATTCTCCACATCTCATTTTGTGATCAAATTGC-ATCTCAAACTGCACCGATC--TTG 2530
consensus_12769#2 CAGATTCTCCACATCTCATTTTGTGATCAAATTGC-ATCTCAAACTGCACCGATC--TTG 1717
consensus_12769#1 GGGATGCCGGATGTCCGGTTTTGCGGTTTAGTGACGATTTTGTATCTCGATGACAAGTTG 1769
*** * * ** ***** * * * * * ** * * * ** ***
consensus_12769#0 TTATACTAGTAACAAATCTTGA-------------------------------------- 2552
consensus_12769#2 TTATACTAGTAACAAATCTTGATTTGGAACCAAAAA------------------------ 1753
consensus_12769#1 AGGGACCTTGCGTGTACTTTTCCCTTGTGCTATAGGTGTCTCATTGAAAAAGGTTGCCTT 1829
** * **
consensus_12769#0 ----------------------------------------------
consensus_12769#2 ----------------------------------------------
consensus_12769#1 CACATTGATTTAGATCGTCAAGACCTCAGCGCCAACCTATTTGGCG 1875
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||