These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12770#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1611 fasta sequence [CCAAGAGAGGCGAAGGGCGCAACGCAACGCGAACCCCTCCTTCCCCCGTCGCGCCCAACCCTAACCCGCCTCCCCTCCACGTAGATCCAATCCCGCCGCCACCGCCGAACCCTAGCCCGCCCCACCTCCCTCCCCGCCGCCGCCGG-GGCGCGCGCGCGCGCGATCGGCGTCCTCCCGCCGCCGCGTTCGTGCGGGGTGGGGTTGGGAGGAGGAGGAGGAGGAGGAGGGCCCGACGGCGGCTCCTCTCGAGACGGGGGCCATGGAGGCGGACGGTGCCGCGGCTGCGGCGGCGGCGGGGGAGGCGAGCACGGAGGCCGGCGCGAGGCCCCTGGCGCCAGAGGAGGAGGCGCTGCGGCGCAACACCGACTGCGTCTACTTCCTCGCCTCGCCCCTCACATGCAAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAG-ATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC-TTTGGAGCAGCTTCAG-ACTCAAAA-GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT-CAGCATGGTGCTCCAA-TAACTAATGAGAGGGG-CAAAA-CAGCCG-TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT-AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG-GTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT-GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATCATCACCAGAGCTCTCGAGGAAGCACTCTTAGCTCTCGTCTGCA] [+] EMBL AK070857 [CCAAGAGAGGCGAAGGGCGCAACGCAACGCGAACCCCTCCTTCCCCCGTCGCGCCCAACCCTAACCCGCCTCCCCTCCACGTAGATCCAATCCCGCCGCCACCGCCGAACCCTAGCCCGCCCCACCTCCCTCCCCGCCGCCGCCGG GGCGCGCGCGCGCGCGATCGGCGTCCTCCCGCCGCCGCGTTCGTGCGGGGTGGGGTTGGGAGGAGGAGGAGGAGGAGGAGGGCCCGACGGCGGCTCCTCTCGAGACGGGGGCCATGGAGGCGGACGGTGCCGCGGCTGCGGCGGCGGCGGGGGAGGCGAGCACGGAGGCCGGCGCGAGGCCCCTGGCGCCAGAGGAGGAGGCGCTGCGGCGCAACACCGACTGCGTCTACTTCCTCGCCTCGCCCCTCACATGCAAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAG ATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC TTTGGAGCAGCTTCAG ACTCAAAA GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATCATCACCAGAGCTCTCGAGGAAGCACTCTTAGCTCTCGTCTGCA] [+] EMBL CB638862 [ GCGAACCCCTCCTTCCCCCGTCGCGCCCAACCCTAACCCGCCTCCCCTCCACGTAGATCCAATCCCGCCGCCACCGCCGAACCCTAGCCCGCCCCACCTCCCTCCCCGCCGCCGCCGGAGGCGCGCGCGCGCGCGATCGGCGTCCTCCCGCCGCCGCGTTCGTGCGGGGTGGG ] [+] EMBL CB632983 [ CGAGACGGGGGCCATGGAGGCGGACGGTGCCGCGGCTGCGGCGGCGGCGGGGGAGGCGAGCACGGAGGCCGGCGCGAGGCCCCTGGCGCCAGAGGAGGAGGCGCTGCGGCGCAACACCGACTGCGTCTACTTCCTCGCCTCGCCCCTCACATGCAAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAG ATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC TTTGGAGCAGCTTCAG ACTCAAAA GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT AAGGAAAGCTTCACTACTTCATCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATA ] [+] EMBL CB632794 [ GGAGGCCGGCGCGAGGCCCCCGGCGCCAGTGGTGGTGGCGCCGCGGCGCAACACCGACCGCGTCTACTTCCTCGCCTCGCCCCTCACATGCAAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAGAATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC TTTGGAGCAGCTTCAGAACTCAAAA GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAAAAAGTAAAAAGTAGTACGCCAGCAGCACTT AAGG ] [+] EMBL AU108129 [ ACCGACTGCGTCTACTTCCTCGCCTCGCCCCTCACATGCAAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAG ATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC TTTGGAGCAGCTTCAG ACTCAAAA GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTTAAAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGNACCAT ] [+] EMBL CB649585 [ AAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAG ATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC TTTGGAGCAGCTTCAG ACTCAAAA GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAAGAGATATGTATCCAGTGGAAGATTA ] [+] EMBL AU108128 [ AAAGTTTCTTCCTTACCTTTTGGAGCAGCTTCAG ACTCAAAAGGAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATTCCAGCATGGTGCTCCAATTAACTAATGAGAGGGGNCAAAACCAGCCGTTTGATCGGTCAACGNTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATCAT ] [-] EMBL CB649586 [ G ACTCAAAA GAATGATTTGTGGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATCATCA ] [-] EMBL CB638863 [ AGCAGCACTT AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATC ] [-] EMBL CB675443 [ CCAGAGCAGTAGGGAGGGTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAGGCGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCTGGATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTGCGAGAGAAAACGGCGTAGATCATTTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGGCCGTGTCGAGATGGATGGATCGGATT ] [+] EMBL CB677255 [ AGATGCGTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATCATCACCAGAGCTCTCGAGGAAGCACTCTTAGCTCTCGTCTGCA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||