cluster # 12773

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Oryza sativa
cluster # 12773 cluster # 12773 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12773#0 length = 1253 sequences # 8
consensus_12773#1 length = 813 sequences # 1

consensus_12773#2 length = 628 sequences # 1
consensus_12773#3 length = 435 sequences # 1

consensusID : consensus_12773#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1253
fasta sequence

                              [TACCCTGGCGCAGCAAAAAATCGTTTCCCCTGAAATCACGCTGCCGATAGCTTCCTCTTCCCCTTGATATCGCTCTCCACAAAATCGATTAGCCTACACACGATTTCACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTATCAGG-TCACAAA-TATC--TATCAACTT--AAGTCT-CGACCT--C-AAGGAGTTCCTC--T-AAGAGTCAGGAAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAAAATTTGAGATGGGAGAAGAACTTCTGTGG-TTGGAAGTTGAGATGGGAGGATTTAGCACGACAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAGCCTTCTGCAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCTGAGGGGTTTTGTTAATCATAAGGCGTGTATCTCATTCAAATTAATCATTTTTTAGCAAACACTTCACTTTTGTTATCCTTGAGCAACCAAGTTTACAATTAAAAAAATTTGAGAATGCAAGATTATTTGAGAAGACTTGCTTGATTTTCATGGATATGTAGTTAGACACAGGTGCTTGACACTTTGAGAAGTGTAAGTTGGCACTTGACAGTTTCCTACTAGGCGTCCAAAAAAAACTAGCATGCACACAAGTCTTGCAAAATCTGAACCATATAGCTTAGCAACTAATTTTTTTCATGCAATGCTTAGGTATCGAACTATTTGATGCCTCACAACTTCTTTCGTCATGTTCTGTAATGCTATATTTTTCCTTTGCCATTACTTAAAGAATACTCAATTTTCGTGTTCGAGAAAGAAAAAAGAATACC]

[+] EMBL AK105480             [TACCCTGGCGCAGCAAAAAATCGTTTCCCCTGAAATCACGCTGCCGATAGCTTCCTCTTCCCCTTGATATCGCTCTCCACAAAATCGATTAGCCTACACACGATTTCACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGACGGGGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATGGGCAAGATCAGTCGCGCCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTATCAGG TCACAAA TATC  TATCAACTT  AAGTCT CGACCT  C AAGGAGTTCCTC  T AAGAGTCAGGAAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAAAATTTGAGATGGGAGAAGAACTTCTGTGG TTGGAAGTTGAGATGGGAGGATTTAGCACGACAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAGCCTTCTGCAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCTGAGGGGTTTTGTTAATCATAAGGCGTGTATCTCATTCAAATTAATCATTT                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF304290             [                                                               TTGATATCGCTCTCCACAAAATCGATTAGCCTACACACGATTTCACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGGAGTTGCGAAAGTGATTGGCAAATATTTTATTCGTACACGGTATCAGG TCACAAA TATC  TATCAACTT  AAGTCT CGACCT  C AAGGAGTTCCTC  T AAGAGTCAGGAAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAAAATTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF311787             [                                                                                                       TTTCACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTATCAGG TCACAAA TATC  TATCAACTT  AAGTCT CGACCT  C AAGGAGTTCCTC  T AAGAGTCAGGAAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAAAATTTGAGATGGGAGAAGAACTTCTGTGGTTTGGAAGTTGAGATGGGAGGATTTAGCACGACAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAGCCTTCTGCAGTTCACTTGATGCACAGATATTTTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF276108             [                                                                                                                                  TCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTATCAGG TCACAAA TATC  TATCAACTT  AAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF276109             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTATCAGG TCACAAA TATC  TATCAACTT  AAGTCT CGACCT  C AAGGAGTTCCTC  T AAGAGTCAGGAAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAAAATTTGAGATGGGAGAAGAACTTCTGTGG TTGGAAGTTGAGATGGGAGGATTTAGCACGACAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAGCCTTCTGCAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCTGAGGGGTTTTGTTAATCATAAGGCGTGTATCTCATTCAAATTAATCATTTTTTAGCAAACACTTCACTTTTGTTATCCTTGAGCAACCAAGTTTACAATTAAAAAAA                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OS1321758            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTATCAGG TCACAAA TATC  TATCAACTT  AAGTCT CGACCT  C AAGGAGTTCCTC  T AAGAGTCAGGAAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAAAATTTGAGATGGGAGAAGAACTTCTGTGG TTGGAAGTTGAGATGGGAGGATTTAGCACGACAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAGCCTTCTGCAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCTGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU102032             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                caAGGTTCACAAATTATCCTTATCAACTTTAAAGTCTCCGACCTTCCAAAGGAGTTCCTCCTTAAAGAGTCAGGAAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAAAATTTGAGATGGGAGAAGAACTTCTGTGG TTGGAAGTTGAGATGGGAGGATTTAGCACGACAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAGCCTTCTGCAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCTGAGGGGTTTTGTTAATCATAAGGCGTGTATCTCATTCAAATTAATCATTTTTTAGCAAACACTTCAaaa                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK059317             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTAATCATTTTTTAGCAAACACTTCACTTTTGTTATCCTTGAGCAACCAAGTTTACAATTATGTCGTTTTGAGAATGCAAGATTATTTGAGAAGACTTGCTTGATTTTCATGGATATGTAGTTAGACACAGGTGCTTGACACTTTGAGAAGTGTAAGTTGGCACTTGACAGTTTCCTACTAGGCGTCCAAAAAAAACTAGCATGCACACAAGTCTTGCAAAATCTGAACCATATAGCTTAGCAACTAATTTTTTTCATGCAATGCTTAGGTATCGAACTATTTGATGCCTCACAACTTCTTTCGTCATGTTCTGTAATGCTATATTTTTCCTTTGCCATTACTTAAAGAATACTCAATTTTCGTGTTCGAGAAAGAAAAAAGAATACC]




>consensus_12773#0
TACCCTGGCGCAGCAAAAAATCGTTTCCCCTGAAATCACGCTGCCGATAGCTTCCTCTTC
CCCTTGATATCGCTCTCCACAAAATCGATTAGCCTACACACGATTTCACCATCCACAAAA
TCGCTCAGCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGC
AGCCTCGCCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGACGGAGATCCACCAG
GAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCA
CCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATCGGCAAGA
TCAGTCGCACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATC
CCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACA
GAGGGCAGGTAAATAAAATGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACAC
GGTATCAGGTCACAAATATCTATCAACTTAAGTCTCGACCTCAAGGAGTTCCTCTAAGAG
TCAGGAAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAA
CAGAAAATTTGAGATGGGAGAAGAACTTCTGTGGTTGGAAGTTGAGATGGGAGGATTTAG
CACGACAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAGCC
TTCTGCAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCTGAGGGGTTTTGTTAA
TCATAAGGCGTGTATCTCATTCAAATTAATCATTTTTTAGCAAACACTTCACTTTTGTTA
TCCTTGAGCAACCAAGTTTACAATTAAAAAAATTTGAGAATGCAAGATTATTTGAGAAGA
CTTGCTTGATTTTCATGGATATGTAGTTAGACACAGGTGCTTGACACTTTGAGAAGTGTA
AGTTGGCACTTGACAGTTTCCTACTAGGCGTCCAAAAAAAACTAGCATGCACACAAGTCT
TGCAAAATCTGAACCATATAGCTTAGCAACTAATTTTTTTCATGCAATGCTTAGGTATCG
AACTATTTGATGCCTCACAACTTCTTTCGTCATGTTCTGTAATGCTATATTTTTCCTTTG
CCATTACTTAAAGAATACTCAATTTTCGTGTTCGAGAAAGAAAAAAGAATACC

consensusID : consensus_12773#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 813
fasta sequence

                              [ACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGTAACAACAGCTCCCACTCCTCCATTTTCTTAATTTCTCTATAAAACATTGGATGCCCTGATATAGGATGAGCACCATACCCAATGATGAGTAATTTCTATAGAATTAACTGCACACCTGATTAATCACTTGACACACTCAGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTATCAGGTCACAAATATCTATCAACTTAAGTCTCGACCTCAAGGAGTTCCTCTAAGAGTCAGGAAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAAAATTTGAGATGGGAGAAGAACTTCTGTGGTTGGAAGTTGAGATGGGAGGATTTAGCACGACAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAG]

[+] EMBL CB627370             [ACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGTAACAACAGCTCCCACTCCTCCATTTTCTTAATTTCTCTATAAAACATTGGATGCCCTGATATAGGATGAGCACCATACCCAATGATGAGTAATTTCTATAGAATTAACTGCACACCTGATTAATCACTTGACACACTCAGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTATCAGGTCACAAATATCTATCAACTTAAGTCTCGACCTCAAGGAGTTCCTCTAAGAGTCAGGAAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAAAATTTGAGATGGGAGAAGAACTTCTGTGGTTGGAAGTTGAGATGGGAGGATTTAGCACGACAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAG]




>consensus_12773#1
ACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCAC
CACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGAC
GGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGC
TTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTC
GCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCC
GCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAAC
AATGGCAAGGACAGAGGGCAGGTAAATAAAATGGTAACAACAGCTCCCACTCCTCCATTT
TCTTAATTTCTCTATAAAACATTGGATGCCCTGATATAGGATGAGCACCATACCCAATGA
TGAGTAATTTCTATAGAATTAACTGCACACCTGATTAATCACTTGACACACTCAGGGAGT
TGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTATCAGGTCACAAATATCTATCA
ACTTAAGTCTCGACCTCAAGGAGTTCCTCTAAGAGTCAGGAAAATGCTAAAATCAGCACA
AGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAAAATTTGAGATGGGAGAAGAA
CTTCTGTGGTTGGAAGTTGAGATGGGAGGATTTAGCACGACAATACATCCATCACCATGT
AGTCCGCTGCCATCTTCACCATATGGTGTAAAG

consensusID : consensus_12773#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 628
fasta sequence

                              [CCCTGAAATCACGCTGCCGATAGCTTCCTCTTCCCCTTGATATCGCTCTCCACAAAATCGATTAGCCTACACACGATTTCACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGGAGTNGTGAACGTGATGGGCAATATCTTATTCGTACACGGTATCAGGTCACAAATATCTATCCCTTAAGTCTCGACCTCAAGGAATTCCTCTAAAAGTCAGGAAAATGCTAANATCNGCCCAGCCTATGGAATAATCCATCNAGATGGAGTGGACCGAACTTNGAG]

[+] EMBL CA753582             [CCCTGAAATCACGCTGCCGATAGCTTCCTCTTCCCCTTGATATCGCTCTCCACAAAATCGATTAGCCTACACACGATTTCACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGGAGTNGTGAACGTGATGGGCAATATCTTATTCGTACACGGTATCAGGTCACAAATATCTATCCCTTAAGTCTCGACCTCAAGGAATTCCTCTAAAAGTCAGGAAAATGCTAANATCNGCCCAGCCTATGGAATAATCCATCNAGATGGAGTGGACCGAACTTNGAG]




>consensus_12773#2
CCCTGAAATCACGCTGCCGATAGCTTCCTCTTCCCCTTGATATCGCTCTCCACAAAATCG
ATTAGCCTACACACGATTTCACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATC
TTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGAC
GGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCG
GAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCG
CCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCT
CCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAA
CTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGGAGTNGTGAACGTGATGG
GCAATATCTTATTCGTACACGGTATCAGGTCACAAATATCTATCCCTTAAGTCTCGACCT
CAAGGAATTCCTCTAAAAGTCAGGAAAATGCTAANATCNGCCCAGCCTATGGAATAATCC
ATCNAGATGGAGTGGACCGAACTTNGAG

consensusID : consensus_12773#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 435
fasta sequence

                              [CCAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTGGTACACGGTATCAGGTCACAAATATCTATCAACTTAAGTCTCGCCCTCAAGGAGTTCCTTTAAGAGTCAGGAAAATGTTAAAATCAGCCCAAGCTATTGATGAATTCAATCAAGATGGAGTTTGACCAGAAAATTTGAGATGGGAGAAGAACTTCTGTGGTTGGAAGTTGAGATGGGAGGATTTAGCACGCCAATACATCCATCCCCATGTAGTCCGCTGCCATTTTCACCATATGGTGTAAAGCCTTCTGCAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCTGAGGGGTTTTGTTAATCATAAGGCGTGTATCTCATTCAAATTAATCATTTTTTAGCAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF311786             [CCAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTGGTACACGGTATCAGGTCACAAATATCTATCAACTTAAGTCTCGCCCTCAAGGAGTTCCTTTAAGAGTCAGGAAAATGTTAAAATCAGCCCAAGCTATTGATGAATTCAATCAAGATGGAGTTTGACCAGAAAATTTGAGATGGGAGAAGAACTTCTGTGGTTGGAAGTTGAGATGGGAGGATTTAGCACGCCAATACATCCATCCCCATGTAGTCCGCTGCCATTTTCACCATATGGTGTAAAGCCTTCTGCAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCTGAGGGGTTTTGTTAATCATAAGGCGTGTATCTCATTCAAATTAATCATTTTTTAGCAAAAAAAAAAAAAAAAAAA]




>consensus_12773#3
CCAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGGAGTTGTGAAAGTGATTGGCAAAT
ATTTTATTGGTACACGGTATCAGGTCACAAATATCTATCAACTTAAGTCTCGCCCTCAAG
GAGTTCCTTTAAGAGTCAGGAAAATGTTAAAATCAGCCCAAGCTATTGATGAATTCAATC
AAGATGGAGTTTGACCAGAAAATTTGAGATGGGAGAAGAACTTCTGTGGTTGGAAGTTGA
GATGGGAGGATTTAGCACGCCAATACATCCATCCCCATGTAGTCCGCTGCCATTTTCACC
ATATGGTGTAAAGCCTTCTGCAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCT
GAGGGGTTTTGTTAATCATAAGGCGTGTATCTCATTCAAATTAATCATTTTTTAGCAAAA
AAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12773#0      ------------------------------------------------------------
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      ------------------------------------------------------------
consensus_12773#2      CCCTGAAATCACGCTGCCGATAGCTTCCTCTTCCCCTTGATATCGCTCTCCACAAAATCG 60
                                                                                   

consensus_12773#0      -----------------------------------------------------TACCCTG 7
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      --------------------ACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATC 40
consensus_12773#2      ATTAGCCTACACACGATTTCACCATCCACAAAATCGCTCAGCCTCCTCCTCCGCTTGATC 120
                                                                                   

consensus_12773#0      GCGCAGCAAAAAATCGTTTCCCCTGAAATCACGCTGCCGATAGCTTCCTCTTCCCCTTGA 67
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      TTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGAC 100
consensus_12773#2      TTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCGCCGGAGATCCGCCTGACGAC 180
                                                                                   

consensus_12773#0      TATCGCTCTCCACAAAATCGATTAGCCTACACACGATTTCACCATCCACAAAATCGCTCA 127
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      GGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCG 160
consensus_12773#2      GGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAAAACCAGTCTCTGCTCCCGCG 240
                                                                                   

consensus_12773#0      GCCTCCTCCTCCGCTTGATCTTGCTGGCCATCTCCTTCACCACCGCTGTACGCAGCCTCG 187
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      GAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCG 220
consensus_12773#2      GAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACCCCAACTCTCTCAGATTGGCG 300
                                                                                   

consensus_12773#0      CCGGAGATCCGCCTGACGACGGAGTTTGAGGTGGCGCGACGGAGATCCACCAGGAGCGAA 247
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      CCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCT 280
consensus_12773#2      CCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCGCACCGCCGACCCCTCGCTCT 360
                                                                                   

consensus_12773#0      AACCAGTCTCTGCTCCCGCGGAGCACGGCCTCGACGACGCTTCCTCCTTCCCACCTCACC 307
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      CCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAA 340
consensus_12773#2      CCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCATCTCCATGACGAAGCAAGAA 420
                                                                                   

consensus_12773#0      CCAACTCTCTCAGATTGGCGCCGCTGCCAGCCACTCACTCGCCATCGGCAAGATCAGTCG 367
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      CTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGGTAAATAAAATGGTAACAA 400
consensus_12773#2      CTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCAGG------------------ 462
                                                                                   

consensus_12773#0      CACCGCCGACCCCTCGCTCTCCCTTGCCAAGAACAGTGCCGCTGCACCTCATCCCAGCCA 427
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      CAGCTCCCACTCCTCCATTTTCTTAATTTCTCTATAAAACATTGGATGCCCTGATATAGG 460
consensus_12773#2      ------------------------------------------------------------
                                                                                   

consensus_12773#0      TCTCCATGACGAAGCAAGAACTACAGATCATGAGATCAACAATGGCAAGGACAGAGGGCA 487
consensus_12773#3      --------------------------------------CCAATGGCAAGGACAGAGGGCA 22
consensus_12773#1      ATGAGCACCATACCCAATGATGAGTAATTTCTATAGAATTAACTGCACACCTGATTAATC 520
consensus_12773#2      ------------------------------------------------------------
                                                                                   

consensus_12773#0      GGTAAATAAAAT--GGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTAT 545
consensus_12773#3      GGTAAATAAAAT--GGGAGTTGTGAAAGTGATTGGCAAATATTTTATTGGTACACGGTAT 80
consensus_12773#1      ACTTGACACACTCAGGGAGTTGTGAAAGTGATTGGCAAATATTTTATTCGTACACGGTAT 580
consensus_12773#2      ----------------GAGTNGTGAACGTGATGGGCAA-TATCTTATTCGTACACGGTAT 505
                                       **** ***** ***** ***** *** ***** ***********

consensus_12773#0      CAGGTCACAAATATCTATCAACTTAAGTCTCGACCTCAAGGAGTTCCTCTAAGAGTCAGG 605
consensus_12773#3      CAGGTCACAAATATCTATCAACTTAAGTCTCGCCCTCAAGGAGTTCCTTTAAGAGTCAGG 140
consensus_12773#1      CAGGTCACAAATATCTATCAACTTAAGTCTCGACCTCAAGGAGTTCCTCTAAGAGTCAGG 640
consensus_12773#2      CAGGTCACAAATATCTATCC-CTTAAGTCTCGACCTCAAGGAATTCCTCTAAAAGTCAGG 564
                       *******************  *********** ********* ***** *** *******

consensus_12773#0      AAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAA 665
consensus_12773#3      AAAATGTTAAAATCAGCCCAAGCTATTGATGAATTCAATCAAGATGGAGTTTGACCAGAA 200
consensus_12773#1      AAAATGCTAAAATCAGCACAAGCTATTGATGAATTCAATCAAGATGGAGTTTGAACAGAA 700
consensus_12773#2      AAAATGCTAANATCNGCCCAGCCTATGGAATAATCCA-TCNAGATGGAG--TGGACCGAA 621
                       ****** *** *** ** **  **** **  *** ** ** ********  **  * ***

consensus_12773#0      AATTTGAGATGGGAGAAGAACTTCTGTGGTTGGAAGTTGAGATGGGAGGATTTAGCACGA 725
consensus_12773#3      AATTTGAGATGGGAGAAGAACTTCTGTGGTTGGAAGTTGAGATGGGAGGATTTAGCACGC 260
consensus_12773#1      AATTTGAGATGGGAGAAGAACTTCTGTGGTTGGAAGTTGAGATGGGAGGATTTAGCACGA 760
consensus_12773#2      C-TTNGAG---------------------------------------------------- 628
                         ** ***                                                    

consensus_12773#0      CAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAGCCTTCTG 785
consensus_12773#3      CAATACATCCATCCCCATGTAGTCCGCTGCCATTTTCACCATATGGTGTAAAGCCTTCTG 320
consensus_12773#1      CAATACATCCATCACCATGTAGTCCGCTGCCATCTTCACCATATGGTGTAAAG------- 813
consensus_12773#2      ------------------------------------------------------------
                                                                                   

consensus_12773#0      CAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCTGAGGGGTTTTGTTAATCATA 845
consensus_12773#3      CAGTTCACTTGATGCACAGATATTTTGCATGTTAACAGCTGAGGGGTTTTGTTAATCATA 380
consensus_12773#1      ------------------------------------------------------------
consensus_12773#2      ------------------------------------------------------------
                                                                                   

consensus_12773#0      AGGCGTGTATCTCATTCAAATTAATCATTTTTTAGCAAACACTTCACTTTTGTTATCCTT 905
consensus_12773#3      AGGCGTGTATCTCATTCAAATTAATCATTTTTTAGCAAAAAAAAAAAAAAAAAAA----- 435
consensus_12773#1      ------------------------------------------------------------
consensus_12773#2      ------------------------------------------------------------
                                                                                   

consensus_12773#0      GAGCAACCAAGTTTACAATTAAAAAAATTTGAGAATGCAAGATTATTTGAGAAGACTTGC 965
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      ------------------------------------------------------------
consensus_12773#2      ------------------------------------------------------------
                                                                                   

consensus_12773#0      TTGATTTTCATGGATATGTAGTTAGACACAGGTGCTTGACACTTTGAGAAGTGTAAGTTG 1025
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      ------------------------------------------------------------
consensus_12773#2      ------------------------------------------------------------
                                                                                   

consensus_12773#0      GCACTTGACAGTTTCCTACTAGGCGTCCAAAAAAAACTAGCATGCACACAAGTCTTGCAA 1085
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      ------------------------------------------------------------
consensus_12773#2      ------------------------------------------------------------
                                                                                   

consensus_12773#0      AATCTGAACCATATAGCTTAGCAACTAATTTTTTTCATGCAATGCTTAGGTATCGAACTA 1145
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      ------------------------------------------------------------
consensus_12773#2      ------------------------------------------------------------
                                                                                   

consensus_12773#0      TTTGATGCCTCACAACTTCTTTCGTCATGTTCTGTAATGCTATATTTTTCCTTTGCCATT 1205
consensus_12773#3      ------------------------------------------------------------
consensus_12773#1      ------------------------------------------------------------
consensus_12773#2      ------------------------------------------------------------
                                                                                   

consensus_12773#0      ACTTAAAGAATACTCAATTTTCGTGTTCGAGAAAGAAAAAAGAATACC 1253
consensus_12773#3      ------------------------------------------------
consensus_12773#1      ------------------------------------------------
consensus_12773#2      ------------------------------------------------