cluster # 12775

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Oryza sativa
cluster # 12775 cluster # 12775 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12775#0 length = 1845 sequences # 7

consensus_12775#1 length = 761 sequences # 3
consensus_12775#2 length = 370 sequences # 1

consensusID : consensus_12775#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1845
fasta sequence

                              [GTCGGCAGCCAGGCTAATCTTGCCATGGATCGTCGGCTCCTTCTCTCTGCTCTACTGTTCATCGCTCTGGCTTGCAGCTCCAACCGCGTCCATGGCGCACTCAACAGGCACAGCTTCCCCGAGGGGTTCCTCTTCGGCACCGGCACCTCCGCGTATCAGTACGAGGGTGCTGTCGACAAGCGAGGTCAGAACATCTGGGACACCTTCAGCCGCATTCCAGGTAAAATCGCAGATGGTAGCAATGCAGATATAGCGAATGACTTCTATCATCGGTACAAGGAGGATTTGAACCTCATCACCGCGATGAACATGGATTCCTTCCGGTTCTCCATTGCATGGAGCAGGATTTTACCAAATGGAACCATTAGTGGAGGAATAAACAAAGAAGGGGTCGAATTCTACAACAGCCTCATCAAC-GAGGTCATAGCTAAAGGACTGAAGCCTTTTGTCACAATTTTCCACTTTGACACTCCACA-GGCTTTGGAGGATAAATATGGCGGCTTCTTGAGCGAAAACATCGTGAAGGACTACGTGGATTATGCGGACCTTTGCTTCAGCCTGTTCGGCGACCGCGTGAAGCTATGGAACACGTTCAACGAGCCGACGATCTTCTGCATGAACGGCTACGCCACCGGCATCATGGCGCCGGGGCGGTGCTCGCCGTACGCGTCGGCGTCGTGCGCCGCCGGCGGCGACTCCGGCAGGGAGCCGTACGTGGCGGGGCACCACCTCCTCGTCGCCCACGCCGAGGCCGTCCGCCTGTACAGGGCCAGGTACCGGGCGGCGCACGGCGGCGAGGTCGGCATCACGCAGGTGTCGCACTGGTTCGAGCCGTACGACGCCGGCTCCGCCGCCGACCGGCGCGCGCGGCGGCGCGCCCTCGACTTCATGCTCGGGTGGTTCATGCACCCCGTGGCGCACGGCGAGTACCCGCCGGCGATGAGGAGGCTCGTCGGCGGCCGGCTGCCGGCGTTCACCGCCGAGCAGTCGGAGATGCTCAGGGGTTCGTTCGACTTCATCGGCCTCAACTACTACACCTCCAACTACGCCGTGGCCGCGCCACCGCCCAACAAGCTCCACCCTTCCTACCTGACTGACAATTGGGTCAACGCGACAGGTTACCGCAATAGCATCCCGATTGGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTGCTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGACGAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGCTTCCACTACAAGCACCTCCAGTTCGTGCACAAGGCCATCCAGGAGGGTGTGAAGGTGAAGGGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGGTTCGGCCTCATCTATGTCGACCGCGCCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCTGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAAAATGATTGTGTTTTCTCATGGATATTGATTTGATTACTGGTACAGCGAGATGTCTATGATTGTTCAGAAATACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK059210             [GTCGGCAGCCAGGCTAATCTTGCCATGGATCGTCGGCTCCTTCTCTCTGCTCTACTGTTCATCGCTCTGGCTTGCAGCTCCAACCGCGTCCATGGCGCACTCAACAGGCACAGCTTCCCCGAGGGGTTCCTCTTTGGCACCGGCACCTCCGCGCATCAGTACGAGGGTGCTGTCGACAAGCGAGGTCAGAACATCTGGGACACCTTCAGCCGCATTCCAGGTAAAATCGCAGATGGTAGCAATGCAGATATAGCGAATGACTTCTATCATCGGTACAAGGAGGATTTGAACCTCATCACCGCGATGAACATGGATTCCTTCCGGTTCTCCATTGCATGGAGCAGGATTTTACCAAATGGAACCATTAGTGGAGGAATAAACAAAGAAGGGGTCGAATTCTACAACAGCCTCATCAAC GAGGTCATAGCTAAAGGACTGAAGCCTTTTGTCACAATTTTCCACTTTGACACTCCACA GGCTTTGGAGGATAAATATGGCGGCTTCTTGAGCGAAAACATCGTGAAGGACTACGTGGATTATGCGGACCTTTGCTTCAGCCTGTTCGGCGACCGCGTGAAGCTATGGAACACGTTCAACGAGCCGACGATCTTCTGCATGAACGGCTACGCCACCGGCATCATGGCGCCGGGGCGGTGCTCGCCGTACGCGTCGGCGTCGTGCGCCGCCGGCGGCGACTCCGGCAGGGAGTCGTACGTGGCGGGGCACCACCTCCTCGTCGCCCACGCCGAGGCCGTCCGCCTGTACAGGGCCAGGTACCGGGCGGCGCACGGCGGCGAGGTCGGCATCACGCAGGTGTCGCACTGGTTCGAGCCGTACGACGCCGGCTCCGCCGCCGACCGGCGCGCGCGGCGGCGCGCCCTCGACTTCATGCTCGGGTGGTTCATGCACCCCGTGGCGCACGGCGAGTACCCGCCGGCGATGAGGAGGCTCGTCGGCGGCCGGCTGCCGGCGTTCACCGCCGAGCAGTCGGAGATGCTCAGGGGTTCGTTCGACTTCATCGGCCTCAACTACTACACCTCCAACTACGCCGTGGCCGCGCCACCGCCCAACAAGCTCCACCCTTCCTACCTGACTGACAATTGGGTCAACGCGACAGGTTACCGCAATAGCATCCCGATTGGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTGCTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGACGAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGCTTCCACTACAAGCACCTCCAGTTCGTGCGCAAGGCCATCCAGGAGGGTGTGAAGGTGAAGGGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGGTTCGGCCTCATCTATGTCGACCGCGCCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGTTTCAGGCAGCTGCCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCTGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAAAATGATTGTGTTTTCTCATGGATATTGATTTGATTACTGGTACA                                                             ]
[+] EMBL AK105908             [GTCGGCAGCCAGGCTAATCTTGCCATGGATCGTCGGCTCCTTCTCTCTGCTCTACTGTTCATCGCTCTGGCTTGCAGCTCCAACCGCGTCCATGGCGCACTCAACAGGCACAGCTTCCCCGAGGGGTTCCTCTTCGGCACCGGCACCTCCGCGTATCAGTACGAGGGTGCTGTCGACAAGCGAGGTCAGAACATCTGGGACACCTTCAGCCGCATTCCAGGTAAAATCGCAGATGGTAGCAATGCAGATATAGCGAATGACTTCTATCATCGGTACAAGGAGGATTTGAACCTCATCACCGCGATGAACATGGATTCCTTCCGGTTCTCCATTGCATGGAGCAGGATTTTACCAAATGGAACCATTAGTGGAGGAATAAACAAAGAAGGGGTCGAATTCTACAACAGCCTCATCAAC GAGGTCATAGCTAAAGGACTGAAGCCTTTTGTCACAATTTTCCACTTTGACACTCCACA GGCTTTGGAGGATAAATATGGCGGCTTCTTGAGCGAAAACATCGTGAAGGACTACGTGGATTATGCGGACCTTTGCTTCAGCCTGTTCGGCGACCGCGTGAAGCTATGGAACACGTTCAACGAGCCGACGATCTTCTGCATGAACGGCTACGCCACCGGCATCATGGCGCCGGGGCGGTGCTCGCCGTACGCGTCGGCGTCGTGCGCCGCCGGCGGCGACTCCGGCAGGGAGCCGTACGTGGCGGGGCACCACCTCCTCGTCGCCCACGCCGAGGCCGTCCGCCTGTACAGGGCCAGGTACCGGGCGGCGCACGGCGGCGAGGTCGGCATCACGCAGGTGTCGCACTGGTTCGAGCCGTACGACGCCGGCTCCGCCGCCGACCGGCGCGCGCGGCGGCGCGCCCTCGACTTCATGCTCGGGTGGTTCATGCACCCCGTGGCGCACGGCGAGTACCCGCCGGCGATGAGGAGGCTCGTCGGCGGCCGGCTGCCGGCGTTCACCGCCGAGCAGTCGGAGATGCTCAGGGGTTCGTTCGACTTCATCGGCCTCAACTACTACACCTCCAACTACGCCGTGGCCGCGCCACCGCCCAACAAGCTCCACCCTTCCTACCTGACTGACAATTGGGTCAACGCGACAGGTTACCGCAATAGCATCCCGATTGGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTGCTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGACGAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGCTTCCACTACAAGCACCTCCAGTTCGTGCACAAGGCCATCCAGGAGGGTGTGAAGGTGAAGGGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGGTTCGGCCTCATCTATGTCGACCGCGCCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCTGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAAAATGATTGTGTTTTCTCATGGATATTGATTTGA                                                                        ]
[+] EMBL AK098938             [    GCAGCCAGGCTAATCTTGCCATGGATCGTCGGCTCCTTCTCTCTGCTCTACTGTTCATCGCTCTGGCTTGCAGCTCCAACCGCGTCCATGGCGCACTCAACAGGCACAGCTTCCCCGAGGGGTTCCTCTTCGGCACCGGCACCTCCGCGTATCAGTACGAGGGTGCTGTCGACAAGCGAGGTCAGAACATCTGGGACACCTTCAGCCGCATTCCAGGTAAAATCGCAGATGGTAGCAATGCAGATATAGCGAATGACTTCTATCATCGGTACAAGGAGGATTTGAACCTCATCACCGCGATGAACATGGATTCCTTCCGGTTCTCCATTGCATGGAGCGGGATTTTACCAAATGGAACCATTAGTGGAGGAATAAACAAAGAAGGGGTCGAATTCTACAACAGCCTCATCAAC GAGGTCATAGCTAAAGGACTGAAGCCTTTTGTCACAATTTTCCACTTTGACACTCCACA GGCTTTGGAGGATAAATATGGCGGCTTCTTGAGCGAAAACATCGTGAAGGACTACGTGGATTATGCGGACCTTTGCTTCAGCCTGTTCGGCGACCGCGTGAAGCTATGGAACACGTTCAACGAGCCGACGATCTTCTGCATGAACGGCTACGCCACCGGCATCATGGCGCCGGGGCGGTGCTCGCCGTACGCGTCGGCGTCGTGCGCCGCCGGCGGCGACTCCGGCAGGGAGCCGTACGTGGCGGGGCACCACCTCCTCGTCGCCCACGCCGAGGCCGTCCGCCTGTACAGGGCCAGGTACCGGGCGGCGCACGGCGGCGAGGTCGGCATCACGCAGGTGTCGCACTGGTTCGAGCCGTACGACGCCGGCTCCGCCGCCGACCGGCGCGCGCGGCGGCGCGCCCTCGACTTCATGCTCGGGTGGTTCATGCACCCCGTGGCGCACGGCGAGTACCCGCCGGCGATGAGGAGACTCGTCGGCGGCCGGCTGCCGGCGTTCACCGCCGAGCAGTCGGAGATGCTCAGGGGTTCGTTCGACTTCATCGGCCTCAACTACTACACCTCCAACTACGCCGTGGCCGCGCCACCGCCCAACAAGCTCCACCCTTCCTACCTGACTGACAATTGGGTCAACGCGACAGGTTACCGCAATAGCATCCCGATTGGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTGCTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGACGAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGCTTCCACTACAAGCACCTCCAGTTCGTGCACAAGGCCATCCAGGAGGGTGTGAAGGTGAAGGGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGGTTCGGCCTCATCTATGTCGACCGCGCCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCTGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAAAATGATTGTGTTTTCTCATGGATATTGATTTGATTAC                                                                    ]
[+] EMBL OSS5064A             [                           GATCGTCGGCTCCTTCTCTCTGCTCTACTGTTCATCGCTCTGGCTTGCAGCTCCAACCGCGTCCATGGCGCACTCAACAGGCACAGCTTCCCCGAGGGGTTCCTCTTCGGCACCGGCACCTCCGCGTATCAGTACGAGGGTGCTGTCGACAAGCGAGGTCAGAACATCTGGGACACCTTCAGCCGCATTCCAGGTAAAATCGCAGATGGTAGCAATGCAGATATAGCGAATGACTTCTATCATCGGTACAAGGAGGATTTGAACCTCATCACCGCGATGAACATGGATTCCTTCCGGTTCTCCATTGCATGGAGCAGGATTTTANCAAATGGGACCATTAGTGGGGGGATAAACAAAGGAGGGGTCGGATTCTACAACAGCCTCATCAACGGGGGTCATAGGTTAAGGGCTTAAGCCTTTTGTCACAANTTTCCACTTTGACAATTCACAGGGTTTTGGGGGGTAAATATGGGGGGTTtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BI306517             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gAATGGGGTCAACGCGAC  GTTACCGCAATGGCATCCCGATTGGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTGCTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGACGAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGCTTCCACTACAAGCACCTCCAGTTCGTGCACAAGGCCATCCAGGAGGGTGTGAAGGTGAAGGGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGGTTCGGCCTCATCTATGTCGACCGCGCCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTG CTTTTTTTTTCTTTTTTCTTTT AAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCCGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAAAATGATTGTGTTTTCTCATGGATAT                                                                                ]
[+] EMBL AU102010             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGGTTCGGCCTCATCTATGTCGACCGCGCCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCTGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAAAATGATTGTGTTTTCTCATGGATATTGATTTGATTACTGGTACAGCGAGATGTCTATGATTGTTCAGAAATACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK060593             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCTGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAAAATGATTGTGTTTTCTCATGGATATTGATTT                                                                          ]




>consensus_12775#0
GTCGGCAGCCAGGCTAATCTTGCCATGGATCGTCGGCTCCTTCTCTCTGCTCTACTGTTC
ATCGCTCTGGCTTGCAGCTCCAACCGCGTCCATGGCGCACTCAACAGGCACAGCTTCCCC
GAGGGGTTCCTCTTCGGCACCGGCACCTCCGCGTATCAGTACGAGGGTGCTGTCGACAAG
CGAGGTCAGAACATCTGGGACACCTTCAGCCGCATTCCAGGTAAAATCGCAGATGGTAGC
AATGCAGATATAGCGAATGACTTCTATCATCGGTACAAGGAGGATTTGAACCTCATCACC
GCGATGAACATGGATTCCTTCCGGTTCTCCATTGCATGGAGCAGGATTTTACCAAATGGA
ACCATTAGTGGAGGAATAAACAAAGAAGGGGTCGAATTCTACAACAGCCTCATCAACGAG
GTCATAGCTAAAGGACTGAAGCCTTTTGTCACAATTTTCCACTTTGACACTCCACAGGCT
TTGGAGGATAAATATGGCGGCTTCTTGAGCGAAAACATCGTGAAGGACTACGTGGATTAT
GCGGACCTTTGCTTCAGCCTGTTCGGCGACCGCGTGAAGCTATGGAACACGTTCAACGAG
CCGACGATCTTCTGCATGAACGGCTACGCCACCGGCATCATGGCGCCGGGGCGGTGCTCG
CCGTACGCGTCGGCGTCGTGCGCCGCCGGCGGCGACTCCGGCAGGGAGCCGTACGTGGCG
GGGCACCACCTCCTCGTCGCCCACGCCGAGGCCGTCCGCCTGTACAGGGCCAGGTACCGG
GCGGCGCACGGCGGCGAGGTCGGCATCACGCAGGTGTCGCACTGGTTCGAGCCGTACGAC
GCCGGCTCCGCCGCCGACCGGCGCGCGCGGCGGCGCGCCCTCGACTTCATGCTCGGGTGG
TTCATGCACCCCGTGGCGCACGGCGAGTACCCGCCGGCGATGAGGAGGCTCGTCGGCGGC
CGGCTGCCGGCGTTCACCGCCGAGCAGTCGGAGATGCTCAGGGGTTCGTTCGACTTCATC
GGCCTCAACTACTACACCTCCAACTACGCCGTGGCCGCGCCACCGCCCAACAAGCTCCAC
CCTTCCTACCTGACTGACAATTGGGTCAACGCGACAGGTTACCGCAATAGCATCCCGATT
GGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTG
CTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGAC
GAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGC
TTCCACTACAAGCACCTCCAGTTCGTGCACAAGGCCATCCAGGAGGGTGTGAAGGTGAAG
GGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGG
TTCGGCCTCATCTATGTCGACCGCGCCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTAC
TGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGAC
AGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGC
CTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCTGA
TAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAA
AATGATTGTGTTTTCTCATGGATATTGATTTGATTACTGGTACAGCGAGATGTCTATGAT
TGTTCAGAAATACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12775#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 761
fasta sequence

                              [GACGTTACCGCAATGGCATCCCGATAGGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTGCTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGCCGAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGCTTCCACTACAAGCACCTCCAGTTCGTGCACAAGGCCATCCAGGAGGGTGTGAAGGTGAAGGGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGGTTCGGCCTCATCTATGTCGACCGCGCCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCCGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAACATGATTGTGTTTTCTCATGGATATCGATTTGATTACT-GGTACA-GCGAGATGTCTATGATT-GTCAGACAACAACAACACAAAAAACGGAGCGACGACATCGTGCGAAATCTGGCTCGAGGCCAAATCCTATAGGGA]

[+] EMBL CB966872             [GACGTTACCGCAATGGCATCCCGATAGGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTGCTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGCCGAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGCTTCCACTACAAGCACCTCCAGTTCGTGCACAAGGCCATCCAGGAGGGTGTGAAGGTGAAGGGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGGTTCGGCCTCATCTATGTCGACCGCGCCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCCGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAACATGATTGTGTTTTCTCATGGATATCGATTTGATTACT GGTACA GCGAGATGTCTATGATT GTCAGACAACAACAACACAAAAAACGGAGCGACGACATCGTGCGAAATCTGGCTCGAGGCCAAATCCTATAGGGA]
[+] EMBL CB966424             [GACGTTACCGCAATGGCATCCCGATAGGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTGCTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGACGAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGCTTCCACTACAAGCACCTCCAGTTCGTGCACAAGGCCATCCAGGAGGGTGTGAAGGTGAAGGGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGGTTCGGCCTCATCTATGTCGACCGCGCCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCAGCCGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCATGGAAAATGATTGTGTTTTCTCATGGATATTGATTTGATTACTGGGTACAGGCGAGATGTCTATGATTGGTCAGACAA AAGAAAAAGAAAAACAGAGCcgcggcct                                     ]
[-] EMBL CB965574             [                                                                                                                                                                                                                                                                                                                                                               CCACGCTCGCGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCTTTTTTTTTCTTTTTTCTTTT AAATAAGAGAGAGAGGCAAGGCTAGGC                                                                                                                                                                                                                 ]




>consensus_12775#1
GACGTTACCGCAATGGCATCCCGATAGGTCCACCGGCTTACACGCCGATCTTCTTTAACT
ATCCGCCGGGGCTACGCGAGCTGCTGCTGTACGTCAAGAGGAGATACAACAATCCCACCA
TCTACATCACCGAGAACGGCACTGCCGAGGCGAATAACAGCACGATCCCCATATCCGAGG
CGCTCAAGGACGAGACGCGGATCGGCTTCCACTACAAGCACCTCCAGTTCGTGCACAAGG
CCATCCAGGAGGGTGTGAAGGTGAAGGGTTACTTTACATGGACGTTCATGGACTGCTTCG
AGTTCGGCGATGGGTTCAAGGACCGGTTCGGCCTCATCTATGTCGACCGCGCCACGCTCG
CGAGGTTTCGCAAGAAGTCCAGCTACTGGTTCGCGGATTTCCTCCGTCGATGATGATGAT
TCAAATGCTTCAAGCTCCTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACT
CGATGAAGCTAGCTTCAGGCAGCTGCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGA
GAGGCAAGGCTAGGCAGGCAGCCGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGC
CCAAATAATTGCCATGTGCATGGAACATGATTGTGTTTTCTCATGGATATCGATTTGATT
ACTGGTACAGCGAGATGTCTATGATTGTCAGACAACAACAACACAAAAAACGGAGCGACG
ACATCGTGCGAAATCTGGCTCGAGGCCAAATCCTATAGGGA

consensusID : consensus_12775#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 370
fasta sequence

                              [TGCGTATGTGTGTGTGGGAATTGTAGAGCGGGATGAACAATTTGCACACATGGAAACACGCTATGACATGGATTAGCGAATGTGTAATACGACTGCACTGATAAGGGAATTTGGGCCCTGCGAGGCCAGAGAATTAAGGCAGCGAGGTGCGACACGCGCCACGCTCGGCGAGGTTTCGTCAAGAAGTCCAGNCTACTGGTTCGCGGATTTCCGTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCACTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCTTTTTTTTTCTGTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAG]

[-] EMBL BU673171             [TGCGTATGTGTGTGTGGGAATTGTAGAGCGGGATGAACAATTTGCACACATGGAAACACGCTATGACATGGATTAGCGAATGTGTAATACGACTGCACTGATAAGGGAATTTGGGCCCTGCGAGGCCAGAGAATTAAGGCAGCGAGGTGCGACACGCGCCACGCTCGGCGAGGTTTCGTCAAGAAGTCCAGNCTACTGGTTCGCGGATTTCCGTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCACTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCAGCTGCTTTTTTTTTCTGTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAG]




>consensus_12775#2
TGCGTATGTGTGTGTGGGAATTGTAGAGCGGGATGAACAATTTGCACACATGGAAACACG
CTATGACATGGATTAGCGAATGTGTAATACGACTGCACTGATAAGGGAATTTGGGCCCTG
CGAGGCCAGAGAATTAAGGCAGCGAGGTGCGACACGCGCCACGCTCGGCGAGGTTTCGTC
AAGAAGTCCAGNCTACTGGTTCGCGGATTTCCGTCCGTCGATGATGATGATTCAAATGCT
TCAAGCTCACTGATCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAG
CTAGCTTCAGGCAGCTGCTTTTTTTTTCTGTTTTTCTTTTAAAATAAGAGAGAGAGGCAA
GGCTAGGCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12775#0      GTCGGCAGCCAGGCTAATCTTGCCATGGATCGTCGGCTCCTTCTCTCTGCTCTACTGTTC 60
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      ATCGCTCTGGCTTGCAGCTCCAACCGCGTCCATGGCGCACTCAACAGGCACAGCTTCCCC 120
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      GAGGGGTTCCTCTTCGGCACCGGCACCTCCGCGTATCAGTACGAGGGTGCTGTCGACAAG 180
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      CGAGGTCAGAACATCTGGGACACCTTCAGCCGCATTCCAGGTAAAATCGCAGATGGTAGC 240
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      AATGCAGATATAGCGAATGACTTCTATCATCGGTACAAGGAGGATTTGAACCTCATCACC 300
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      GCGATGAACATGGATTCCTTCCGGTTCTCCATTGCATGGAGCAGGATTTTACCAAATGGA 360
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      ACCATTAGTGGAGGAATAAACAAAGAAGGGGTCGAATTCTACAACAGCCTCATCAACGAG 420
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      GTCATAGCTAAAGGACTGAAGCCTTTTGTCACAATTTTCCACTTTGACACTCCACAGGCT 480
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      TTGGAGGATAAATATGGCGGCTTCTTGAGCGAAAACATCGTGAAGGACTACGTGGATTAT 540
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      GCGGACCTTTGCTTCAGCCTGTTCGGCGACCGCGTGAAGCTATGGAACACGTTCAACGAG 600
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      CCGACGATCTTCTGCATGAACGGCTACGCCACCGGCATCATGGCGCCGGGGCGGTGCTCG 660
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      CCGTACGCGTCGGCGTCGTGCGCCGCCGGCGGCGACTCCGGCAGGGAGCCGTACGTGGCG 720
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      GGGCACCACCTCCTCGTCGCCCACGCCGAGGCCGTCCGCCTGTACAGGGCCAGGTACCGG 780
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      GCGGCGCACGGCGGCGAGGTCGGCATCACGCAGGTGTCGCACTGGTTCGAGCCGTACGAC 840
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      GCCGGCTCCGCCGCCGACCGGCGCGCGCGGCGGCGCGCCCTCGACTTCATGCTCGGGTGG 900
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      TTCATGCACCCCGTGGCGCACGGCGAGTACCCGCCGGCGATGAGGAGGCTCGTCGGCGGC 960
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      CGGCTGCCGGCGTTCACCGCCGAGCAGTCGGAGATGCTCAGGGGTTCGTTCGACTTCATC 1020
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      GGCCTCAACTACTACACCTCCAACTACGCCGTGGCCGCGCCACCGCCCAACAAGCTCCAC 1080
consensus_12775#1      ------------------------------------------------------------
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      CCTTCCTACCTGACTGACAATTGGGTCAACGCGACAGGTTACCGCAATAGCATCCCGATT 1140
consensus_12775#1      ----------------------------------GACGTTACCGCAATGGCATCCCGATA 26
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      GGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTG 1200
consensus_12775#1      GGTCCACCGGCTTACACGCCGATCTTCTTTAACTATCCGCCGGGGCTACGCGAGCTGCTG 86
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      CTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGAC 1260
consensus_12775#1      CTGTACGTCAAGAGGAGATACAACAATCCCACCATCTACATCACCGAGAACGGCACTGCC 146
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      GAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGC 1320
consensus_12775#1      GAGGCGAATAACAGCACGATCCCCATATCCGAGGCGCTCAAGGACGAGACGCGGATCGGC 206
consensus_12775#2      -----------------------------------------TGCGTATGTGTGTGTGGGA 19
                                                                 *   *   * *  * ** 

consensus_12775#0      TTCCACTACAAGCACCTCCAGTTCGTGCACAAGGCCATCCAGGAGGGTGTGAAGGTGAAG 1380
consensus_12775#1      TTCCACTACAAGCACCTCCAGTTCGTGCACAAGGCCATCCAGGAGGGTGTGAAGGTGAAG 266
consensus_12775#2      ATTGTAGAGCGGGATGAACAATTTGCACACATGGAAACACGCTATGACATGGATTAGCGA 79
                        *     *   * *    ** ** *  **** **  *  *   * *   ** *   *   

consensus_12775#0      GGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGG 1440
consensus_12775#1      GGTTACTTTACATGGACGTTCATGGACTGCTTCGAGTTCGGCGATGGGTTCAAGGACCGG 326
consensus_12775#2      ATGTGTAATACGACTGCACTGATAAGGGAATTTGGGCCCTGCGA--GGCCAGAGAATTAA 137
                          *    ***     *  * **       ** * *  * ****  **    ** *    

consensus_12775#0      TTCGGCCTCATCTATGTCGACCGCGCCACGCTCG-CGAGGTTTCG-CAAGAAGTCCAGC- 1497
consensus_12775#1      TTCGGCCTCATCTATGTCGACCGCGCCACGCTCG-CGAGGTTTCG-CAAGAAGTCCAGC- 383
consensus_12775#2      GGCAGC--GAGGTGCGACA--CGCGCCACGCTCGGCGAGGTTTCGTCAAGAAGTCCAGNC 193
                         * **   *  *  * *   ************* ********** ************  

consensus_12775#0      TACTGGTTCGCGGATTTCC-TCCGTCGATGATGATGATTCAAATGCTTCAAGCTC-CTGA 1555
consensus_12775#1      TACTGGTTCGCGGATTTCC-TCCGTCGATGATGATGATTCAAATGCTTCAAGCTC-CTGA 441
consensus_12775#2      TACTGGTTCGCGGATTTCCGTCCGTCGATGATGATGATTCAAATGCTTCAAGCTCACTGA 253
                       ******************* *********************************** ****

consensus_12775#0      TCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCA 1615
consensus_12775#1      TCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCA 501
consensus_12775#2      TCGACAGTGATTCGATCCGATCTATATCTCCAGTGTACTCGATGAAGCTAGCTTCAGGCA 313
                       ************************************************************

consensus_12775#0      GCTGCCTTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCA 1675
consensus_12775#1      GCTGC-TTTTTTTTTCTTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAGGCA 560
consensus_12775#2      GCTGCTTTTTTTTTCTGTTTTTCTTTTAAAATAAGAGAGAGAGGCAAGGCTAGGCAG--- 370
                       ***** ********   ****************************************   

consensus_12775#0      GCTGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCA 1735
consensus_12775#1      GCCGATAGAATTACCAAACCTGATGTGTGCAGTGTGCTGCCCAAATAATTGCCATGTGCA 620
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      TGGAAAATGATTGTGTTTTCTCATGGATATTGATTTGATTACTGGTACAGCGAGATGTCT 1795
consensus_12775#1      TGGAACATGATTGTGTTTTCTCATGGATATCGATTTGATTACTGGTACAGCGAGATGTCT 680
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      ATGATTGTTCAGAAATACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------- 1845
consensus_12775#1      ATGATTGTCAGACAACAACAACACAAAAAACGGAGCGACGACATCGTGCGAAATCTGGCT 740
consensus_12775#2      ------------------------------------------------------------
                                                                                   

consensus_12775#0      ---------------------
consensus_12775#1      CGAGGCCAAATCCTATAGGGA 761
consensus_12775#2      ---------------------