These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12780#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2044 fasta sequence [AGATGAGGAAATTTTGTCAATGCGCAGAAATTTGAGTTTGCTTTATGAAGCATGCACTAGTTCAGTTTCTGAGATTGAAGGGATGACTGGTATTGAGTCTGGTGACCATAGTTGTTCTGTTGTGCAGAACCATTTATCTGCAGATGACCATATAAAATCAGTAGTTAATCAATTAGTTGCGGCCATAAAGACTACTCAGAACAGTAACGAAGGCAACACAAAGGAACTAAAGGCCACTGTTCTTGAATTGCAGCAGGAGCTTCAAGAAAAACATATCCAAATAAGTACAATCAGTGCAGAACTTGCATCTCAGGTAAAGGAAGCTGAATCTTCTGCGAAGCAGCTATCTGTTGAGCTTGAAAATGCTAGAATGGAAATCCACAACTTAGAGAAACACTCTGAAATGTTGCTTAATCAGAAGAAGAATTTAGAGACTCAAGTAAGCGAGCTTAAAGATATGGAGGCAGTGGCACATGATCAGCATGGAAGAATAAAGGACTTGAGTGATGAACTTAGCAAAAAAGACCAAGAGATTGAAGGTTTGATGCAAGCACTTGATGAAGAAGAAAGGGAGCTTGAGGTCTTGGAGAACAAAAGCAATGACTTAGAGAAAATGCTTCAAGAAAAAGAATTCGCTTTAAAGAGTCTTGAAGTTTCTAGGACCAAAGCCTTGACAAACTTGCAACAACTGTTGACAAGTTTGATGAGTTGCATAGCTTGTCTGAAAGCCTTCTTGCTGAAGTGGAAAACCTACAGTCACAACTGCAAGAGAGAGATTCAGAGATCTCTTTTCTGCGGCAAGAAATCACGAGAAGTACCAATGAACTGCTAACAACTGAAGAGAGCAACAAGAAGTACTCATCTCAGATAAATGATTTTACTAAATGGTTGGAAACTGCACTATTGCAGTTTAGTGTACACTGTGATAGCACGAATGATTATGAATGCACTCAAGTTCCTGTATATATGGATATGTTGGAGAAGAAAATAGGATCTCTGATATCTGAATCAGATGAATTAAGGGTGACCCTGCAAAGTAAAGATTCTTTATTACAGGCTGAGAGAACCAGGATGGAAGAATTGCTGCGTAAATCAGAGGCTCTTGAATCTTCTTTGAGCCAAAAAGATTCTCAGATAGGGTTGCTTCGTCGAGACAGGACATCAGGCCAACCTAGCAGATTTATAAACTTGCCAGGCACTTCAGAGATTGAGCAAGTGAATGAAAAAGTAAGCCCAGCTGCGGTTGTCACTCAGATTCGAGGGGCACGAAAAGTCAATACCGACCAAGTTGCTATTGATGTAGAGGTGAAGGACAAGCCATTAGATGATGAAGATGATGATAAAGCACATGGTTTCAAGTCACTGACGATGTCACACATTGTTCCAAAGTTCACTCGACCTATATCAGATAGGATTGATGGAATGTGGGTCTCAGGAGATAGATTGCTCATGAGACAA-CAACATTGAGA-CTTGGCGTTTTGCTATATTGGATTGTGCTGCATGCATTGCTTGCTAGTTTTATTTGAAGATTATATGTAAAGCTGTAGTGATCTCCTTTGGTGAGCTACTGTACA-GTAGTATGTCTATACTCCATAGCAAGCTACACA-AAGAAAGTAGTCCGCGCTAATGTTGTTGATTCTTTTGGATACGTTACAAGGATACTCGTATTGGCAGCTGCGAATCAACTTCAGGTTGTCTTCGAGATG-CATTTGTCCTGCCTCAGCTGGAATAGAGA-ACTGAAGA-AAGCAGCAGCAGCAGCGGCAAAGATCCCCTCTGTAAATACTCTCATTTTTGTTTGCTCTATTCTTTGCTTTTAGAAAGATGTAGGGCATAATTTTGAATGGTAGTAGAATCTACATTATACGTAACAGCTTTACAGAAGAATGACAAGTAGTTCTCAAAGTTTTAGGGTATTGGGATGGTAACAGCTTTTCCCCCACTTTGAAAGTTGGCTCCCTGTATTCTCTCTCTCTACCCAATATTTTTGTTTACATGTGCACAAGCAGCAATTATTTCATTATTATTATT--CCCAC--AAAAAAAAAGG] [+] EMBL CB676108 [AGATGAGGAAATTTTGTCAATGCGCAGAAATTTGAGTTTGCTTTATGAAGCATGCACTAGTTCAGTTTCTGAGATTGAAGGGATGACTGGTATTGAGTCTGGTGACCATAGTTGTTCTGTTGTGCAGAACCATTTATCTGCAGATGACCATATAAAATCAGTAGTTAATCAATTAGTTGCGGCCATAAAGACTACTCAGAACAGTAACGAAGGCAACACAAAGGAACTAAAGGCCACTGTTCTTGAATTGCAGCAGGAGCTTCAAGAAAAACATATCCAAATAAGTACAATCAGTGCAGAACTTGCATCTCAGGTAAAGGAAGCTGAATCTTCTGCGAAGCAGCTATCTGTTGAGCTTGAAAATGCTAGAATGGAAATCCACAACTTAGAGAAACACTCTGAAATGTTGCTTAATCAGAAGAAGAATTTAGAGACTCAAGTAAGCGAGCTTAAAGATATGGAGGCAGTGGCACATGATCAGCATGGAAGAATAAAGGACTTGAGTGATGAACTTAGCAAAAAAGACCAAGAGATTGAAGGTTTGATGCAAGCACTTGATGAAGAAGAAAGGGAGCTTGAGGTCTTGGAGAACAAAAGCAATGACTTAGAGAAAATGCTTCAAGAAAAAGAATTCGCTTTAAAGAGTCTTG ] [+] EMBL AK071342 [ AAAATGCTTCAAGAAAAAGAATTCGCTTTAAAGAGTCTTGAAGTTTCTAGGACCAAAGCCTTGACAAACTTGCAACAACTGTTGACAAGTTTGATGAGTTGCATAGCTTGTCTGAAAGCCTTCTTGCTGAAGTGGAAAACCTACAGTCACAACTGCAAGAGAGAGATTCAGAGATCTCTTTTCTGCGGCAAGAAATCACGAGAAGTACCAATGAACTGCTAACAACTGAAGAGAGCAACAAGAAGTACTCATCTCAGATAAATGATTTTACTAAATGGTTGGAAACTGCACTATTGCAGTTTAGTGTACACTGTGATAGCACGAATGATTATGAATGCACTCAAGTTCCTGTATATATGGATATGTTGGAGAAGAAAATAGGATCTCTGATATCTGAATCAGATGAATTAAGGGTGACCCTGCAAAGTAAAGATTCTTTATTACAGGCTGAGAGAACCAGGATGGAAGAATTGCTGCGTAAATCAGAGGCTCTTGAATCTTCTTTGAGCCAAAAAGATTCTCAGATAGGGTTGCTTCGTCGAGACAGGACATCAGGCCAACCTAGCAGATTTATAAACTTGCCAGGCACTTCAGAGATTGAGCAAGTGAATGAAAAAGTAAGCCCAGCTGCGGTTGTCACTCAGATTCGAGGGGCACGAAAAGTCAATACCGACCAAGTTGCTATTGATGTAGAGGTGAAGGACAAGCCATTAGATGATGAAGATGATGATAAAGCACATGGTTTCAAGTCACTGACGATGTCACACATTGTTCCAAAGTTCACTCGACCTATATCAGATAGGATTGATGGAATGTGGGTCTCAGGAGATAGATTGCTCATGAGACAA CAACATTGAGA CTTGGCGTTTTGCTATATTGGATTGTGCTGCATGCATTGCTTGCTAGTTTTATTTGAAGATTATATGTAAAGCTGTAGTGATCTCCTTTGGTGAGCTACTGTACA GTAGTATGTCTATACTCCATAGCAAGCTACACA AAGAAAGTAGTCCGCGCTAATGTTGTTGATTCTTTTGGATACGTTACAAGGATACTCGTATTGGCAGCTGCGAATCAACTTCAGGTTGTCTTCGAGATG CATTTGTCCTGCCTCAGCTGGAATAGAGA ACTGAAGA AAGCAGCAGCAGCAGCGGCAAAGATCCCCTCTGTAAATACTCTCATTTTTGTTTGCTCTATTCTTTGCTTTTAGAAAGATGTAGGGCATAATTTTGAATGGTAGTAGAATCTACATTATACGTAACAGCTTTACAGAAGAATGACA ] [+] EMBL AY224554 [ AACTGTTGACAAGTTTGATGAGTTGCATAGCTTGTCTGAAAGCCTTCTTGCTGAAGTGGAAAACCTACAGTCACAACTGCAAGAGAGAGATTCAGAGATCTCTTTTCTGCGGCAAGAAATCACGAGAAGTACCAATGAACTGCTAACAACTGAAGAGAGCAACAAGAAGTACTCATCTCAGATAAATGATTTTACTAAATGGTTGGAAACTGCACTATTGCAGTTTAGTGTACACTGTGATAGCACGAATGATTATGAATGCACTCAAGTTCCTGTATATATGGATATGTTGGAGAAGAAAATAGGATCTCTGATATCTGAATCAGATGAATTAAGGGTGACCCTGCAAAGTAAAGATTCTTTATTACAGGCTGAGAGAACCAGAATGGAAGAATTGCTGCGTAAATCAGAGGCTCTTGAATCTTCTTTGAGCCAAAAAGATTCTCAGATAGGGTTGCT ] [-] EMBL CB676109 [ AGGTGAAGGACAAGCCATTAGATGATGAAGATGATGATAAAGCACATGGTTTCAAGTCACTGACGATGTCACACATTGTTCCAAAGTTCACTCGACCTATATCAGATAGGATTGATGGAATGTGGGTCTCAGGAGATAGATTGCTCATGAGACAACCAACATTGAGA CTTGGCGTTTTGCTATATTGGATTGTGCTGCATGCATTGCTTGCTAGTTTTATTTGAAGATTATATGTAAAGCTGTAGTGATCTCCTTTGGTGAGCTACTGTACA GTAGTATGTCTATACTCCATAGCAAGCTACACA AAGAAAGTAGTCCGCGCTAATGTTGTTGATTCTTTTGGATACGTTACAAGGATACTCGTATTGGCAGCTGCGAATCAACTTCAGGTTGTCTTCGAGATG CATTTGTCCTGCCTCAGCTGGAATAGAGA ACTGAAGA AAGCAGCAGCAGCAGCGGCAAAGATCCCCTCTGTAAATACTCTCATTTTTGTTTGCTCTATTCTTTGCTTTTAGAAAGATGTAGGGCATAATTTTGAATGGTAGTAGAATCTACATTATACGTAACAGCTTTACAGAAGAATGACAAGTAGTTCTCAAAGTTTTAGGGTATTGGGATGGTAACAGCTTTTCCCCCACTTTGAAAGTTGGCTCCCTGTATTCTCTCTCTCTACCCAATATTTTTGTTTACATGTGCAAAAGGAGCAATTATTTCATTATTATTATT CCCAC AAAAAAAAAGG] [+] EMBL BI807564 [ AGACCTTGGCGTTTTGCTATATTGGATTGTGCTGCAT CATTGCTTGCTAGTTTTATTTGAAGATTATATGTAAAGCTGTAGTGATCTCCTTTGGTGAGCTACTGTACACGTAGTATGTCTATACTCCATAGCAAGCTACACACAAGAAAGTAGTCCGCGCTAATGTTGTTGATTCTTTTGGATACGTTACAAGGATACTCGTATTGGCAGCTGCGAATC ACTTCAGGTTGTCTTCGAGATG CATTTGTCCTGCCTCAGCTGGAATAGAGA ACTGAAGA AAGCAGCAGCAGCAGCGGC AAGATCCCCTCTGTAAATACTCTCATTTTTGTTTGCTCTATTCTTTGCTTTTAGAAAGATGTAGGGCATAATTTTGAATGGTAGTAGAATCTACATTATACGTAACAGCTTTACAGAAGAATGAC AGTAGTTCTCAAAGTTTTAGGGTATTGGGATGGTAACAGCTTTTCCCCCACTTTGAAAGTTGGCTCCCTGTATTCTCTCTCTCTACCCAATATTTTTGTTTACATGTGCACA CAGC ATTATTTCATTATTATTATT AA AAAAA ] [+] EMBL BI810276 [ TGAG TACTGT CA TAGTATGTCTATACTCCATAGCCAGCTACAC AAGAAAGTAGTCCGCGCTAATGTTGTTGATTCTTTTGGATACGTTACCAGGATACTCGTATTGGCAGCTGCGAATCAACTTCAGGTTGTCTTCGAGATGCCATTTGTCCTGCCTCAGCTGGAATAGAGATCCTGAAGAGAAGCCGCAGCA CAGCGGCCAAGATCCCCTCTGTAAATACTCTCATTTTTGTTTGCTCTATTCTTTGCTTTTAGAAAGATGTAGGGCATAATTTTGAATGGTAGTAGAATCTACCTTATACGTAACAGCTTTACAGAAGAATGACCAGTAGTTCTCCAAGTTTTAGGGTATTGGGATGGTAACCGCTTTTCCCCCACTTTGAAAGTTGGCTCCCTGTATTCTCTCTCTCTACCCCATATTTTTGTTTACATGTGC CACCCAGCCATTATTTCATTATTATTATTACCCCCCTGAAAAAAAAAa ] [+] EMBL AA751209 [ TGAGCTACTGTACA GTAGTATGTCTATACTCCATAGCAAGCTACACA AAGAAAGTAGTCCGCGCTAATGTTGTTGATTCTTTTGGATACGTTACAAGGATACTCGTATTGGCAGCTGCGAATCAACTTCAGGTTGTCTTCGAGATG CATTTGTCCTGCCTCAGCTGGAATAGAGA ACTGAAGA AAGCAGCAGCAGCA BGCAAAGATCCCCTCTGT ] consensusID : consensus_12780#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 570 fasta sequence [CTTTTTTGAAAGCGGGGGGGGTTCTTCCTCTGGGGGAGACCCCCCCGCCCCGTTGTGTTTTTTTTTCCCCCAGCAGGGCTTCTCCAAAAAAAAAAAATTGTGCGCCCCCAAAAAAGTGGTTTTTTTTTGGGGGGCGCCCCCCAAAAGAAATTCTGTTTTGGGGGGGGGGGGGAAAAAAACTCCGGGGGTGTTTTTCAAAAAGAGACTTTTTCCCCCCCCTCAAGGGGGAAAAAAGAAACTTTAAAAAAAAACCCCCCCCCGAAAAGGGGGCAAAAAAACCCCCCCCCGGAAAAAACCCCTCCATTTTGGGGTGGGCTCTTTTTTTTTGGCGTTTTAAAAAAAATGTTAGGGGCTAAATTTTGAATGGGTGGTAGAAATTTTCCTTTTTTACGTACCAAGCTTTCCAAAAGAATTGCCAAAGTAGGTCTCCAAAATTTTAGGGTATTTGGATGGTAACAGCTTTTCCCCCCACTTTGAAAGTTGGCTCCCTGTATTCTCTCTCTCTACCCAATATTTTTGTTTACATGTGCAACACAGCAATTATTTCATTATTATTATTAAAAAAAAAAA] [-] EMBL CA760488 [CTTTTTTGAAAGCGGGGGGGGTTCTTCCTCTGGGGGAGACCCCCCCGCCCCGTTGTGTTTTTTTTTCCCCCAGCAGGGCTTCTCCAAAAAAAAAAAATTGTGCGCCCCCAAAAAAGTGGTTTTTTTTTGGGGGGCGCCCCCCAAAAGAAATTCTGTTTTGGGGGGGGGGGGGAAAAAAACTCCGGGGGTGTTTTTCAAAAAGAGACTTTTTCCCCCCCCTCAAGGGGGAAAAAAGAAACTTTAAAAAAAAACCCCCCCCCGAAAAGGGGGCAAAAAAACCCCCCCCCGGAAAAAACCCCTCCATTTTGGGGTGGGCTCTTTTTTTTTGGCGTTTTAAAAAAAATGTTAGGGGCTAAATTTTGAATGGGTGGTAGAAATTTTCCTTTTTTACGTACCAAGCTTTCCAAAAGAATTGCCAAAGTAGGTCTCCAAAATTTTAGGGTATTTGGATGGTAACAGCTTTTCCCCCCACTTTGAAAGTTGGCTCCCTGTATTCTCTCTCTCTACCCAATATTTTTGTTTACATGTGCAACACAGCAATTATTTCATTATTATTATTAAAAAAAAAAA] consensusID : consensus_12780#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 528 fasta sequence [AGAAGTACTCATCTCAGATAAATGATTTTACTAAATGGTTGGAAACTGCACTATTGCAGTTTAGTGTACACTGTGATAGCACGAATGATTATGAATGCACTCAAGTTCCTGTATATATGGATATGTTGGAGAAGAAAATAGGATCTCTGATATCTGAATCAGATGAATTAAGGGTGACCCTGCAAAGTAAAGATTCTTTATTACAGGCTGAGAGAACCAGAATGGAAGAATTGCTGCGTAAATCAGAGGCTCTTGAATCTTCTTTGAGCCAAAAAGATTCTCAGATAGGGTTGCTTCGTCGAGACAGGACATCAGGCCAACCTAGCAGATTTATAAACTTGCCAGGCACTTCAGAGATTGAGCAAGTGAATGAAAAAGTAAGCCCAGCTGCGGTTGTCACTCAGATTCGAGGGGCACGAAAAGTNNNNACCGACCAAGTTGCTATTGATGTNNNGNTNGNNNNNNACNNGCCATTNNNTGATGANGNTGATGATAAAGCACATGGTTTCNNNTNNNTGANNNTGTCNN] [+] EMBL CF197031 [AGAAGTACTCATCTCAGATAAATGATTTTACTAAATGGTTGGAAACTGCACTATTGCAGTTTAGTGTACACTGTGATAGCACGAATGATTATGAATGCACTCAAGTTCCTGTATATATGGATATGTTGGAGAAGAAAATAGGATCTCTGATATCTGAATCAGATGAATTAAGGGTGACCCTGCAAAGTAAAGATTCTTTATTACAGGCTGAGAGAACCAGAATGGAAGAATTGCTGCGTAAATCAGAGGCTCTTGAATCTTCTTTGAGCCAAAAAGATTCTCAGATAGGGTTGCTTCGTCGAGACAGGACATCAGGCCAACCTAGCAGATTTATAAACTTGCCAGGCACTTCAGAGATTGAGCAAGTGAATGAAAAAGTAAGCCCAGCTGCGGTTGTCACTCAGATTCGAGGGGCACGAAAAGTNNNNACCGACCAAGTTGCTATTGATGTNNNGNTNGNNNNNNACNNGCCATTNNNTGATGANGNTGATGATAAAGCACATGGTTTCNNNTNNNTGANNNTGTCNN] [+] EMBL AU030439 [ GAATCAGATGAATTAAGGGTGACCCTGCAAAGTAAAGATTCTTTATTACAGGCTGAGAGAACCAGAATGGAAGAATTGCTGCGTAAATCAGAGGCTCTTGAATCTTCTTTGAGCCAAAAAGATTCTCAGATAGGGTTGCTTCGTCGAGACAGGACATCAGGCCAACCTAGCAGATTTATAAACTTGCCAGGCACTTCAGAGATTGAGCAAGTGAATGAAAAAGTAAGCCCAGCTGCGGTTGTCACTCAGATTCG ] consensusID : consensus_12780#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 157 fasta sequence [AGTAGTTCTTCAAANTTTTAGGGTATTGGGATGGTANCAGCTTTTCCCCCACTTTGAAAGTTGGTTCCCTGTATTCTNTTTCTCTACCCAATATTTTTGTTTACATGTGCAACACAGCAATTATTTCATTATTATTATTACCACACTGACCAAAAAA] [+] EMBL AU030440 [AGTAGTTCTTCAAANTTTTAGGGTATTGGGATGGTANCAGCTTTTCCCCCACTTTGAAAGTTGGTTCCCTGTATTCTNTTTCTCTACCCAATATTTTTGTTTACATGTGCAACACAGCAATTATTTCATTATTATTATTACCACACTGACCAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 AGATGAGGAAATTTTGTCAATGCGCAGAAATTTGAGTTTGCTTTATGAAGCATGCACTAG 60 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TTCAGTTTCTGAGATTGAAGGGATGACTGGTATTGAGTCTGGTGACCATAGTTGTTCTGT 120 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TGTGCAGAACCATTTATCTGCAGATGACCATATAAAATCAGTAGTTAATCAATTAGTTGC 180 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 GGCCATAAAGACTACTCAGAACAGTAACGAAGGCAACACAAAGGAACTAAAGGCCACTGT 240 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TCTTGAATTGCAGCAGGAGCTTCAAGAAAAACATATCCAAATAAGTACAATCAGTGCAGA 300 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 ACTTGCATCTCAGGTAAAGGAAGCTGAATCTTCTGCGAAGCAGCTATCTGTTGAGCTTGA 360 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 AAATGCTAGAATGGAAATCCACAACTTAGAGAAACACTCTGAAATGTTGCTTAATCAGAA 420 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 GAAGAATTTAGAGACTCAAGTAAGCGAGCTTAAAGATATGGAGGCAGTGGCACATGATCA 480 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 GCATGGAAGAATAAAGGACTTGAGTGATGAACTTAGCAAAAAAGACCAAGAGATTGAAGG 540 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TTTGATGCAAGCACTTGATGAAGAAGAAAGGGAGCTTGAGGTCTTGGAGAACAAAAGCAA 600 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TGACTTAGAGAAAATGCTTCAAGAAAAAGAATTCGCTTTAAAGAGTCTTGAAGTTTCTAG 660 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 GACCAAAGCCTTGACAAACTTGCAACAACTGTTGACAAGTTTGATGAGTTGCATAGCTTG 720 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TCTGAAAGCCTTCTTGCTGAAGTGGAAAACCTACAGTCACAACTGCAAGAGAGAGATTCA 780 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 --------------------------------------------------------CTTT 4 consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 GAGATCTCTTTTCTGCGGCAAGAAATCACGAGAAGTACCAATGAACTGCTAACAACTGAA 840 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 TTTGAAAGCGGGGGGGGTTCTTCCTCTGGGGGAGACCCCCCCGCCCCGTTGTGTTTTTTT 64 consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 GAGAGCAACAAGAAGTACTCATCTCAGATAAATGATTTTACTAAATGGTTGGAAACTGCA 900 consensus_12780#2 ----------AGAAGTACTCATCTCAGATAAATGATTTTACTAAATGGTTGGAAACTGCA 50 consensus_12780#1 TTCCCCCAGCAGGGCTT-CTCCAAAAAAAAAAAATTGTGCGCCCCCAAAAAAGTGGTTTT 123 consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 CTATTGCAGTTTAGTGTACACTGTGATAGCACGAATGATTATGAATGCACTCAAGTTCCT 960 consensus_12780#2 CTATTGCAGTTTAGTGTACACTGTGATAGCACGAATGATTATGAATGCACTCAAGTTCCT 110 consensus_12780#1 TTTTTGGGGGGCGCCCCCCAAAAGAAATTCTGTTTTGGGGGGGGGGGGGAAAAAAACTCC 183 consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 GTATATATGGATATGTTGGAGAAGAAAATAGGATCTCTGATATCTGAATCAGATGAATTA 1020 consensus_12780#2 GTATATATGGATATGTTGGAGAAGAAAATAGGATCTCTGATATCTGAATCAGATGAATTA 170 consensus_12780#1 GGGGGTGTTTTTCAAAAAGAGACTTTTTCCCCCCCCTCAAGGGGGAAAAAAGAAACTTTA 243 consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 AGGGTGACCCTGCAAAGTAAAGATTCTTTATTAC--------AGGCTGAGAGAACCAGGA 1072 consensus_12780#2 AGGGTGACCCTGCAAAGTAAAGATTCTTTATTAC--------AGGCTGAGAGAACCAGAA 222 consensus_12780#1 AAAAAAAACCCCCCCCCGAAAAGGGGGCAAAAAAACCCCCCCCCGGAAAAAACCCCTCCA 303 consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TGGAAGAATTGCTGCGTAAATCAGAGGCTCTTGAATCTTCTTTGAGCCAAAAAGATTCTC 1132 consensus_12780#2 TGGAAGAATTGCTGCGTAAATCAGAGGCTCTTGAATCTTCTTTGAGCCAAAAAGATTCTC 282 consensus_12780#1 TTTTGGGGTGGGCTCTTTTTTTTTGGCGTTTTAAAAAAAATGTTAGGGGC-TAAATTTTG 362 consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 AGATAGGGTTGCTTCGTCGAGACAGGACATCAGGCCAACCTAGCAGATTTATAAACTTGC 1192 consensus_12780#2 AGATAGGGTTGCTTCGTCGAGACAGGACATCAGGCCAACCTAGCAGATTTATAAACTTGC 342 consensus_12780#1 AATGGGTGGTAGAAATTTTCCTTTTTTACGTACCAAGCTTTCCAAAAGAATTGCCAAAGT 422 consensus_12780#3 ---------------------------------------------------------AGT 3 consensus_12780#0 CAGGCACTTCAGAGATTGAGCAAGTGAATGAA--AAAGT------AAGCCCAGCTGCGGT 1244 consensus_12780#2 CAGGCACTTCAGAGATTGAGCAAGTGAATGAA--AAAGT------AAGCCCAGCTGCGGT 394 ** consensus_12780#1 AGGTCTCCAAAATTTTAGGGTATTTGGATGGTAACAGCTTTTCCCCCCACTTTGAAAGTT 482 consensus_12780#3 AGTTCTTCAAANTTTTAGGGTATTGGGATGGTANCAGCTTTTCCCCC-ACTTTGAAAGTT 62 consensus_12780#0 TG-TCACTCAGATTCGAGGG-GCACGAAAAGTCAATACCGACCAAGTTGCTATTGATGTA 1302 consensus_12780#2 TG-TCACTCAGATTCGAGGG-GCACGAAAAGTNNNNACCGACCAAGTTGCTATTGATGTN 452 * ** * ** **** * * ** * * ** * * ** consensus_12780#1 GGCTCCCTGTATTCTCTCTCTCTACCCAATATTTTTGTTTACATGTGCAACACAGCAATT 542 consensus_12780#3 GGTTCCCTGTATTCTNTTTCTCTACCCAATATTTTTGTTTACATGTGCAACACAGCAATT 122 consensus_12780#0 GAGGTG---AAGGACAAGCCATTAGATGATGAAGATGATGATA-AAGCA-CATGGTT-TC 1356 consensus_12780#2 NNGNTNGNNNNNNACNNGCCATTNNNTGATGANGNTGATGATA-AAGCA-CATGGTT-TC 509 * * ** ** * * * *** ** * * consensus_12780#1 ATTTCATTATTATTATTAAAAAAAAAAA-------------------------------- 570 consensus_12780#3 ATTTCATTATTATTATTACCACACTGACCAAAAAA------------------------- 157 consensus_12780#0 AAGTCACTGACGATGTCACACATTGTTCCAAAGTTCACTCGACCTATATCAGATAGGATT 1416 consensus_12780#2 NNNTNNNTGANNNTGTCNN----------------------------------------- 528 * * * * consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 GATGGAATGTGGGTCTCAGGAGATAGATTGCTCATGAGACAACAACATTGAGACTTGGCG 1476 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TTTTGCTATATTGGATTGTGCTGCATGCATTGCTTGCTAGTTTTATTTGAAGATTATATG 1536 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TAAAGCTGTAGTGATCTCCTTTGGTGAGCTACTGTACAGTAGTATGTCTATACTCCATAG 1596 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 CAAGCTACACAAAGAAAGTAGTCCGCGCTAATGTTGTTGATTCTTTTGGATACGTTACAA 1656 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 GGATACTCGTATTGGCAGCTGCGAATCAACTTCAGGTTGTCTTCGAGATGCATTTGTCCT 1716 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 GCCTCAGCTGGAATAGAGAACTGAAGAAAGCAGCAGCAGCAGCGGCAAAGATCCCCTCTG 1776 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TAAATACTCTCATTTTTGTTTGCTCTATTCTTTGCTTTTAGAAAGATGTAGGGCATAATT 1836 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 TTGAATGGTAGTAGAATCTACATTATACGTAACAGCTTTACAGAAGAATGACAAGTAGTT 1896 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 CTCAAAGTTTTAGGGTATTGGGATGGTAACAGCTTTTCCCCCACTTTGAAAGTTGGCTCC 1956 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ------------------------------------------------------------ consensus_12780#3 ------------------------------------------------------------ consensus_12780#0 CTGTATTCTCTCTCTCTACCCAATATTTTTGTTTACATGTGCACAAGCAGCAATTATTTC 2016 consensus_12780#2 ------------------------------------------------------------ consensus_12780#1 ---------------------------- consensus_12780#3 ---------------------------- consensus_12780#0 ATTATTATTATTCCCACAAAAAAAAAGG 2044 consensus_12780#2 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||