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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12798#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2612 fasta sequence
[GAGCAAAGGTGGAGTTCATGCCCTCATCATATGCCATGCAGATTATGTCAAACTAAAAGCACTTGCAATATCAATAGCTGAGGAAATTGAGTTTCAGTTTGACTATAAAGATGTTGCACTAGCAAATGCGTCCAAGTCTAATTTGCATCTAATTAATATTTCAATTGATGATGAGGGATATGAGGAAGAGGGAACAGATTGGACATCACGGATGGGTCTAAACCTCAAACATAGTTCCAAGATTAGGAAAGAAACACCAGAGAGTCAAGAACAGCCTCCTTTATCATTTTGGGGATTATTTTCCAAGCCATCACCTATTTCAGTTGTTTCAAACTTGAAATGGCTTTGCAGGAAAGCACGGGACTCCATATAAGGTCATTGGTTATGCTTCCAGCCCTGGATGTTGTGGCAACTCCAGACAAAGTTAAGCCCGCAGTTACAAAAACTCAGATAGACACTTCTGGAAATGCTCATGAAAACATTGGAAGTGAACAAACTCTGCAACAAGATTGTGTCCTGCAAGAATCCAATGATGTAGCTGATATGTGCAAGCGTCCCAAGGTGAATGATCAGGATGGACATTCTCTTATTAATATNCCAATTGCTGTTGCTGAATATCCTATGATGCATCAAGTTTGTGAGCGTCCAGTAAGTGTGAGTGCATGTGATGACCCTATCTGTTCATTTGATTCCCAGGATTCACCCACAACTGTTGCAGTGTCAGCTGGCAAACCTACCAGAGAACAATGTGGTGCTGAATCAACTGAGTTGAGTACTGTAAAACAGTTCCTGGACAATGGGCTTATCGCTGAGGGAGGCAGCATGAACTTCATAAGTAATCATGAGCACTTAGAATCTGACAATGCAACTTCAGTGTGCAAAGATGAACAATTGCAAGTTCAACAAGATCAGTTGGCCATGGTACTTTGTAATAATCCCAACACAGAATTGGTTGCAGGAGAATTACATGGGGGGGCAGCATCATCAACCCTTGAAAATGAGGATAGCTGTGGTAATACGTCTTACTGTTCTGACACTGTATTAAAGAACAGCGAACCTGATACAGATGATCAACCTGAAACATGTGATCGTAGTGTTGTTCTTGTAACACCAAAGTCGAGCTGTGACCAGATGATTTCTAGCAGTGACAGAAGTTGCAGTCTGACCTTGGACTGCCCTGTCTCCACTGATGCTGCCTTTTCAAGCGAAAAGCTGTCTATGGCTCATGATTTGATGGGCAGAGAGTTGCAGGCAGTCCATAATTCAAAGGCTGAGGTTGTGGCCAGTTTGACTGATGTCAAGGGTGCTAAGCTCAATAGCATTCATACCACACAGTTACCTCATGAATCTCCAAGCAGTGATTTCATCATTTCAGAAGGTGCGCAATCTGCTTCAACAACTGCAATTCCCAGAAAAAATGGAACATCCATGCACACAGAGTCAAATTCAATTGATATTTTACTTGGAGTTCTAGCCGATGAATCTAAGGTCTCTTCTGGAAAGGATGAGGTTGGCAAAGCTTCCTTGACATTGATGACACTGGCTGGCAATGACCAATCTGCAGATGATGTAACTCAGGATGAAGTTGCAGAGATCACTGATCCGTCGCATGGCTTCTGCTCATCAGACATAGTGTCTAGAAGCATTGGAAGTTCAAACAGAACAAATATCATATGTTATGCCAGACGCAAACACAAAAGAAAGAGCGGATCTGAGTTCAATATTAATAGTCCCCAAAGC-TTGGGGAGCTTTGTCCGCTCT-CCAT-GTGAAAGC-TTGAGACCAAGGACTAGACCTGCGATTGTTGAAGACATGACAAACGAAACAAAAACTGCAGAAGCTTCAACTGCAAATAAGAGGAAGAAGGCAAAGGTGGAAGCATTT-CAGTGTGA-CATAGAATTTTGTGACATGACATTTGAGACTAAAGCTGAACTTCGTGCTCACCAACGCAATATCTGCACCGACGAGTCTTGTGGCAAGCGCTTCAGCTCTCACAAATACCTGAAGCGTCATCAGTGTGTACA-CAGAGATGAGAGGCCATTCAAATGCCCCTGGGATGGTTGTCCAATGACTTTCAAGTGGTTGTGGGCGCAAACTGAGCATATCAGAGTCCATACAGGCGAGCGACCGTACAAGTGCTCGGCTCCTGACTGTGGCCAGAGTTTCAGATATGTCTCAGATTATAGTCGCCATAGAAAGAAGTTTAATCATTATTGATAGGTTGCCACTTTTCATGTTACTGATGAGTGATCACAGCTGGGGGCAAAAGCTCTAGCTGTTGAGGCCATGCTTGTTGTACCAGATCACGTATTTAACCA-CCTGACGTCTGATAGGCCTAGTGTTTGTTCCTTCGTTAGCAATGTGTTTAGTGTAGAAAGTAGAGAAATAGTTGGGGGTTAAGGATTGTACCCCCTGATGCATCAACGTAGATTTTCATAAGCAGCTGATCTTTCCCATTTACATGGGATCATTCA-TTCTTTCTTCAGTCCGTAAAGTTTATGAATACAGATCACTTGGATAACTTCCAAGTACCATTTGAAAAATATGTTAATGTCTCATGGTCTCAGTGAGCACATTGCTGTCTAATAAAAAAATGGCTTACGATAAAAAAAAAA]
[+] EMBL AU056543 [GAGCAAAGGTGGAGTTCATGCCCTCATCATATGCCATGCAGATTATGTCAAACTAAAAGCACTTGCAATATCAATAGCTGAGGAAATTGAGTTTCAGTTTGACTATAAAGATGTTGCACTAGCAAATGCGTCCAAGTCTAATTTGCATCTAATTAATATTTCAATTGATGATGAGGGATATGAGGAAGAGGGAACAGATTGGACATCACGGATGGGTCTAAACCTCAAACATAGTTCCAAGATTAGGAAAGAAACACCAGAGAGTCAAGAACAGCCTCCTTTATCATTTTGGGGATTATTTTCCAAGCCATCACCTATTTCAGTTGTTTCAAACTTGAAATGGCTTTGCAGGAAAGCACGGGACTCCATATAAGGTCATTGGTTATGCTTCCAGCCCTGGATGTTGTGGCAACTCCAGACAAAGTTAAGCCCGCAGTTACAAAAACTCAGATAGACACTTCTGGAAATGCTCATGAAAACATTGGAAGTGAACAAACTCTGCAACAAGATTGTGTCCTGCAAGAATCCAATGATGTAGCTGATATGTGCAAGCGTCCCAAGGTGAATGATCAGGATGGACATTCTCTTATTAATATNCCAATTGCTGTTGCTGAATATCCTATGATGCATCAAGTTTGTGAGCGTCCAGTAAGTGTGAGTGCATGTGATGACCCTATCTGTTCATTTGATTCCC ]
[+] EMBL AK110807 [ ACTTCTGGAAATGCTCATGAAAACATTGGAAGTGAACAAACTCTGCAACAAGATTGTGTCCTGCAAGAATCCAATGATGTAGCTGATATGTGCAAGCGTCCCAAGGTGAATGATCAGGATGGACATTCTCTTATTAATATTCCAATTGCTGTTGCTGAATATCCTATGATGCATCAAGTTTGTGAGCGTCCAGTAAGTGTGAGTGCATGTGATGACCCTATCTGTTCATTTGATTCCCAGGATTCACCCACAACTGTTGCAGTGTCAGCTGGCAAACCTACCAGAGAACAATGTGGTGCTGAATCAACTGAGTTGAGTACTGTAAAACAGTTCCTGGACAATGGGCTTATCGCTGAGGGAGGCAGCATGAACTTCATAAGTAATCATGAGCACTTAGAATCTGACAATGCAACTTCAGTGTGCAAAGATGAACAATTGCAAGTTCAACAAGATCAGTTGGCCATGGTACTTTGTAATAATCCCAACACAGAATTGGTTGCAGGAGAATTACATGGGGGGGCAGCATCATCAACCCTTGAAAATGAGGATAGCTGTGGTAATACGTCTTACTGTTCTGACACTGTATTAAAGAACAGCGAACCTGATACAGATGATCAACCTGAAACATGTGATCGTAGTGTTGTTCTTGTAACACCAAAGTCGAGCTGTGACCAGATGATTTCTAGCAGTGACAGAAGTTGCAGTCTGACCTTGGACTGCCCTGTCTCCACTGATGCTGCCTTTTCAAGCGAAAAGCTGTCTATGGCTCATGATTTGATGGGCAGAGAGTTGCAGGCAGTCCATAATTCAAAGGCTGAGGTTGTGGCCAGTTTGACTGATGTCAAGGGTGCTAAGCTCAATAGCATTCATACCACACAGTTACCTCATGAATCTCCAAGCAGTGATTTCATCATTTCAGAAGGTGCGCAATCTGCTTCAACAACTGCAATTCCCAGAAAAAATGGAACATCCATGCACACAGAGTCAAATTCAATTGATATTTTACTTGGAGTTCTAGCCGATGAATCTAAGGTCTCTTCTGGAAAGGATGAGGTTGGCAAAGCTTCCTTGACATTGATGACACTGGCTGGCAATGACCAATCTGCAGATGATGTAACTCAGGATGAAGTTGCAGAGATCACTGATCCGTCGCATGGCTTCTGCTCATCAGACATAGTGTCTAGAAGCATTGGAAGTTCAAACAGAACAAATATCATATGTTATGCCAGACGCAAACACAAAAGAAAGAGCGGATCTGAGTTCAATATTAATAGTCCCCAAAGC TTGGGGAGCTTTGTCCGCTCT CCAT GTGAAAGC TTGAGACCAAGGACTAGACCTGCGATTGTTGAAGACATGACAAACGAAACAAAAACTGCAGAAG ]
[+] EMBL CF329972 [ AATCTCCAAGCAGTGATTTCATCATTTCAGAAGGTGCGCAATCTGCTTCAACAACTGCAATTCCCAGAAAAAATGGAACATCCATGCACACAGAGTCAAATTCAATTGATATTTTACTTGGAGTTCTAGCCGATGAATCTAAGGTCTCTTCTGGAAAGGATGAGGTTGGCAAAGCTTCCTTGACATTGATGACACTGGCTGGCAATGACCAATCTGCAGATGATGTAACTCAGGATGAAGTTGCAGAGATCACTGATCCGTCGCATGGCTTCTGCTCATCAGACATAGTGTCTAGAAGCATTGGAAGTTCAAACAGAACAAATATCATATGTTATGCCAGACGCAAACACAAAAGAAAGAGCGGATCTGAGTTCAATATTAATAGTCCCCAAAGC TTGGGGAGCTTTGTCCGCTCT CCAT GTGAAAGC TTGAGACCAAGGACTAGATCTGCGATTGTTGAAGACATGACAAACGAAACAAAAACTGCAGAAGCTTCAACTGCAAATAAGAGGAAGAAGGCAAAGGTGGAAGCATTT CAGTGTGA CATAGAATTTTGTGACATGACATTTGAGACTAAAGCTGAACTTCGTGCTCACCAACGCAATATCTGCACCGACGAGTCTTGTGGCAAGCGCTTCAGCTCTCACAAATACCTGAAG ]
[+] EMBL C27006 [ ATATTTTACTTGGAGTTCTAGCCGATGAATCTAAGGTCTCTTCTGGAAAGNATGAGGTTGGCAAAGCTTCCTTGACATTGATGACACTGGCTGGCAATGACCAATCTGCAGATGATGTAACTCAGGATGAAGTTGCAGAGATCACTGATCCGTCGCATGGCTTCTGCTCATCAGACATAGTGTCTAGAAGCATTGNAAGTTCAAACAGAACAAATATCATATGTTATGCCAGANGCAAACACAAAAGAAAGAGCGGNTCTGAGTTCAATATTAATAGTCCCCAAAGCTTTGGGGAGCTTTGTCCGCTCTCCCATGGTGAAAGCTTTGAGACCAAGG ]
[+] EMBL CF331799 [ TACTTGGAGTTCTAGCCGATGAATCTAAGGTCTCTTCTGGAAAGGATGAGGTTGGCAAAGCTTCCTTGACATTGATGACACTGGCTGGCAATGACCAATCTGCAGATGATGTAACTCAGGATGAAGTTGCAGAGATCACTGATCCGTCGCATGGCTTCTGCTCATCAGACATAGTGTCTAGAAGCATTGGAAGTTCAAACAGAACAAATATCATATGTTATGCCAGACGCAAACACAAAAGAAAGAGCGGATCTGAGTTCAATATTAATAGTCCCCAAAGC TTGGGGAGCTTTGTCCGCTCT CCAT GTGAAAGC TTGAGACCAAGGACTAGACCTGCGATTGTTGAAGACATGACAAACGAAACAAAAACTGCAGAAGCTTCAACTGCAAATAAGAGGAAGAAGGCAAAGGTGTAAGCATTT CAGTGTGA CATAGAATTTTGTGACATGACATTTGAGACTAAAGCTGAACTTCGTGCTCACCAACGCAATATCTGCACCGACGAGTCTTGTGGCAAGCGCTTCAGCTCTCACAAATACCTGAAGCGTCATCAGTGTGTACA CAGAGATGAGAGGCCATTCAA ]
[+] EMBL AU056544 [ nnAGAGGAAGAAGNCAAAGGTGGAACCATTTCCAGTGTGACCATAGAATTTTGTGACATGACATTTGAGACTNAAGCTGAACTTCGTGCTCACCAACGCAATATCTGCACCGACGAGTCTTGTGGCAAGCGCTTCAGCTCTCACAAATACCTGAAGCGTCANCAGTGTGTACACCAGAGATGAGAGGCCATTCAAATGCCCCTGGGATGGTTGTCCAATGACTTTCAAGTGGTTGTGGGCGCAAACTGAGCATATCAGAGTCCATACAGGCGAGCGACCGTACAAGTGCTCGGCTCCTGACTGTGGCCAGAGTTTCAGATATGTCTCAGATTATAGTCGCCATAGAAAGAAGTTTAATCATTATTGATAGGTTGCCACTTTTCATGTTACTGATGAGTGATCACAGCTGGGGGCAAAAGCTCTAGCTGTTGAGGCCATGCTTGTTGTACCAGATCACGTATTTAACCA CCTGACGTCTGATAGGCCTAGTGTTTGTTCCTTCGTTAGCAATGTGTTTAGTGTAGAAAGTAGAGAAATAGTTGGGGGTTAAGGATTGTACCCCCTGATGCATCAACGTAGATTTTCATAAGCAGCTGATCTTTCCCATTTACATGGGATCATTCA TTCTTTCTTCAGTCCGTAAAGTTTATGAATACAGATCACTTGGATAACTTCCAAGTACNNTTTGAAAAAaaaaaaaaa ]
[-] EMBL CF329973 [ TGTGTACA CAGAGATGAGAGGCCATTCAAATGCCCCTGGGATGGTTGTCCAATGACTTTCAAGTGGTTGTGGGCGCAAACTGAGCATATCAGAGTCCATACAGGCGAGCGACCGTACAAGTGCTCGGCTCCTGACTGTGGCCAGAGTTTCAGATATGTCTCAGATTATAGTCGCCATAGAAAGAAGTTTAATCATTATTGATAGGTTGCCACTTTTCATGTTACTGATGAGTGATCACAGCTGGGGGCAAAAGCTCTAGCTGTTGAGGCCATGCTTG TGTACCAGATCACGTATTTAACCA CCTGACGTCTGATAGGCCTAGTGTTTGTTCCTTCGTTAGCAATGTGTTTAGTGTAGAAAGTAGAGAAATAGTTGGGGGTTAAGGATCGTACCCCCTGATGCATCAACGTAGATTTTCATAAGCAGCTGATCTTTCCCATTTACATGGGATCATTCA TTCTTTCTTCAGTCCGTAAAGTTTATGAATACAGATCACTTGGATAACTTCCAAGTACCATTTGAAAAATGTGTTAATGTCTCATGGTCTCAGTGAGCACATTGCTGTCTAAAAAAAAAA ]
[-] EMBL CF331798 [ GTACA CAGAGATGAGAGGCCATTCAAATGCCCCTGGGATGGTTGTCCAATGACTTTCAAGTGGTTGTGGGCGCAAACTGAGCATATCAGAGTCCATACAGGCGAGCGACCGTACAAGTGCTCGGCTCCTGACTGTGGCCAGAGTTTCAGATATGTTTCAGATTATAGTCGCCATAGAAAGAAGTTTAATCATTATTGATAGGTTGCCACTTTTCATGTTACTGATGAGTGATCACAGCTGGGGGCAAAAGCTCTAGCTGTTGAGGCCATGCTTGTTGTACCAGATCACGTATTTAACCA CCTGACGTTTGATAGGCCTAGTGTTTGTTCCTTCGTTAGCAATGTGTTTAGTGTAGAAAGTAGAGAAATAGTTGGGGGTTAAGGATTGTACCCCCTGATGCATCAACGTAGATTTTCATAAGCAGCTGATCTTTCCCATTTACATGGGATCATTCA TTCTTTTTTCAGTCCGTAAAGTTTATGAATACAGATCACTTGGATAACTTCCAAGTACCATTTGAAAAAaa ]
[+] EMBL BQ909111 [ TCAGAGTCCATACAGGCGAGCGACCGTACAAGTGCTCGGCTCCTGACTGTGGCCAGAGTTTCAGATATGTCTCAGATTATAGTCGCCATAGAAAGAAGTTTAATCATTATTGATAGGTTGCCACTTTTCATGTTACTGATGAGTGATCACAGCTGGGGGCAAAAGCTCTAGCTGTTGAGGCCATGCTTGTTGTACCAGATCACGTATTTAACCACCCTGACGTATGATAGGCCTAGTGTTTGTTCCTTCGTTAGCAATGTGTTTAGTGTAGAAAGTAGAGAAATAGTTGGGGGTTAAGGATTGTACCCCCTGATGCATCAACGTAGATTTTCATAAGCAGCTGATCTTTCCCATTTACATGGGATCATTCACTTCTTTCTTCAGTCCGTAAAGTTTATGAATACAGATCACTTGGATAACTTCCAAGTACCATTTGAAAAATATGTTGATGTCTCATGGTCTCAGTGAGCACATTGCTGTCTAATAATAATATGGCTTACGATAAAAAAAAAA]
[+] EMBL AU093246 [ atcCAGAGTCCATACAGGCGNGCGACCGTANAAGTGCTCGGCTCCTGACTGTGGCCAGAGTTTCAGATNTGTCNCAGATTATAGTCGCCATAGAAAGAAGTTTAATCATTATTGATAGGTTGCCACTTTTCATGTTACTGATGAGTGATCACAGCTGGGGGCAAAAGCTCTAGCTGTTGAGGCCATGCTTGTTGTACCAGATCACGTATTTAACCA CCTGACGTCTGATAGGCCTAGTGTTTGTTCCTTCGTTAGCAATGTGTTTAGTGTAGAAAGTAGAGAAATAGTTGGGGGTTAAGGATTGTACCCCNTGATGCATCAACGTAGATTTTCATAAGCAGCTGATCTTTCCCATTTACATGGGATCATTCA TTCTTTCTTCAGTCCGTAAAGTTTATGAATACAGATCACTTGGATAACTTCCAAGTACCATTTGAAAAATGTGTTAATGTCTCATGGTCTCAGTGAGCACATTGCTGTCTAATAAAAAAAa ]
[-] EMBL AU225123 [ ccgctGCAATGTGTTTAGTGTAGAAAGTAGAGAAATAGTTGGGGGTTAAGGATTGTACCCCCTGATGCATCAACGTAGATTTTCATAAGCAGCTGATCTTTCCCATTTACATGGGATCATTCA TTCTTTCTTCAGTCCGTAAAGTTTATGAATACAGATCACTTGGATAACTTCCAAGTACCATTTGAAAAATGTGTTAATGTCTCATGGTCTCAGTGAGCACATTGCTGTCTAATAATAATATGGagcggc ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||