These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12802#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1328 fasta sequence [AGCTCCCATCTCTCCTCGACTCCTCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGGATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGT-GGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGGCAGCGCCCCGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT-CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATCGA-GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGCCAAATTACAAATTGCAAGACACAATTTTGTGCAATCGTAATGAGAGACTAAAGAGTCTAGTTCAATTGTCTGAAAAAA] [+] EMBL AK070170 [AGCTCCCATCTCTCCTCGACTCCTCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGTATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGT GGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGACAGCGCACCGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATCGA GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGCCAAATTACAAATTGCAAGACACAATTTTGTGCAATCGTAATGAGAGACTAAAGAGTCTAG ] [+] EMBL AK104423 [ TCCCATCTCTCCTCGACTCCTCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGGATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGT GGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGGCAGCGCCCCGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATCGA GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGCCAAATTACAAATTGCAAGACACAATTTTGTGCAATCGTAATGAGAGACTAAAG ] [+] EMBL CA754169 [ CTCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGGATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGTNGGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGAT ] [+] EMBL CB653604 [ TCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGGATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGT GGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGAC ] [+] EMBL CB657729 [ TCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGGATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGT GGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGAT ] [-] EMBL CB657730 [ GCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGGCAGCGCCCCGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATCGA GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGCCAAATTACAAATTGCAAGACACAATTTTGTG ] [-] EMBL CB653605 [ CGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGGCAGCGCCCCGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATCGA GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGCCAAATTACAAATTGCAAGACACAATTTTGg ] [+] EMBL BE229493 [ cgagAAGCCGTCGAACCTGCTCCTCGGCGCCGACGG SAGGTCAAGATCGCCGACTTCGG GCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGSCACTTCCCGCTTCTCCCCGTGGGGCAGCG CCCGACTGGGCGGCGCTCATGTGCGCCATATKCTTCGGCGAGGCGCCGGAGATGCCGSCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGSCCVSGCGGCGCGCGTCGGTCGGCGAGCTGCTCGASCACCCGTTCATCGCCGAGCGGSACG CSCCGATGCGSA CGCTCCGCTCGC ] [-] EMBL CB656880 [ CGCCGACGTGTGGAGCCTCGGGTTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGGCAGCGCCCCGACTGGGCGGCGCTCATGTGCGCCATATGATTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGTTGCTCGAGCACCCGTTCATCGCGGAGCGGGACGCCGCTGATGCGCAGCGCT CGCTGGCCGCGCTAGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATGGA GCCGCCGGTTAAATTATCTCGGCAGATTTAGGAACCAATCAGAGATGTCGCGTACATAATCTTTGCCACGTGGACGAACAGCTTGGTCCCGTGTGTTTTTTTCTTCCTCTCTGTTCACTTCTTGC ] [+] EMBL BI811689 [ CGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGAT CCCGCCCCCGCGTCGGAGGAGTTCCGGGACTTC TGTCGCGGT CCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCC ATCGACGCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTT CCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTT GCC C AATTGTAAGACAC ATTTTGTCAAATCGTAATGAGAGACTAAAGAGTCTAGTTCAATTGTCTGAAAAAA] [+] EMBL BI813825 [ GCGGCGCTCATGTGCCCCATATGCTTCGGCGAGGCGCCGGAGAT CC GCC CCGCGTCGGAGGAGTTCCGGGACTTCGTGTC CGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTC CCGCGCTCGTCGCCGAGGCGGAGCAGA CGGCGATCTATAGCCAATCGA GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGC CAAATTGTAAGACACAATTTTGTGCAATCGTAATGAGAGACTAAAGAGTCTAGTTCAAaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||