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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12802#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1328 fasta sequence
[AGCTCCCATCTCTCCTCGACTCCTCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGGATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGT-GGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGGCAGCGCCCCGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT-CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATCGA-GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGCCAAATTACAAATTGCAAGACACAATTTTGTGCAATCGTAATGAGAGACTAAAGAGTCTAGTTCAATTGTCTGAAAAAA]
[+] EMBL AK070170 [AGCTCCCATCTCTCCTCGACTCCTCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGTATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGT GGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGACAGCGCACCGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATCGA GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGCCAAATTACAAATTGCAAGACACAATTTTGTGCAATCGTAATGAGAGACTAAAGAGTCTAG ]
[+] EMBL AK104423 [ TCCCATCTCTCCTCGACTCCTCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGGATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGT GGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGGCAGCGCCCCGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATCGA GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGCCAAATTACAAATTGCAAGACACAATTTTGTGCAATCGTAATGAGAGACTAAAG ]
[+] EMBL CA754169 [ CTCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGGATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGTNGGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGAT ]
[+] EMBL CB653604 [ TCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGGATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGT GGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGAC ]
[+] EMBL CB657729 [ TCTCTTCTCTTCTCCTCTCCTCTCCTCTCCAACCGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCGCAGCAGCAGCAGCAGCCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTGTACAAGGCGCGCCACCGACGGGGTTGCCCCGCGCAGCAGCCGCTCGCGCTCAAGCTCTTCGCCGCCGGGGACCTCTCCGCGGCGCGGGAGGCCGAGATACTCAGGCTCGCGGCGGATGCCCCGCACGTCGTGAGGCTCCACGCGGTGGTCCCGTCGGCCGCCGGT GGGGTGGAGGAGCCCGCCGCGCTGGCGCTCGAGCTCATGCCCGGGGGTTCCCTGGCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGAT ]
[-] EMBL CB657730 [ GCTGGGTTGCTTCGCCGTCTCGGGCGCCCGATGGGGGAGCGCCCCATCGCCGCCGTGGCGAGGCAGGCGCTACTCGGGCTCGAGGCCCTTCACGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGGCAGCGCCCCGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATCGA GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGCCAAATTACAAATTGCAAGACACAATTTTGTG ]
[-] EMBL CB653605 [ CGCGCTCCGCATCGTGCACCGCGACCTCAAGCCGTCGAACCTGCTCCTCGGCGCCGACGGCGAGGTCAAGATCGCCGACTTCGGCGCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGGCAGCGCCCCGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATCGA GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGCCAAATTACAAATTGCAAGACACAATTTTGg ]
[+] EMBL BE229493 [ cgagAAGCCGTCGAACCTGCTCCTCGGCGCCGACGG SAGGTCAAGATCGCCGACTTCGG GCGGGCAAGGTCCTGCGGCGGCGGCTCGACCCCTGCGCGTCCTACGTCGGGACGGCGGCCTACATGTCCCCGGAGAGGTTCGACCCGGAGGCCTACTCCGGCGACTACGACCCGTACGCCGCCGACGTGTGGAGCCTCGGGGTAGCGATCCTTGAGCTGTACCTCGGSCACTTCCCGCTTCTCCCCGTGGGGCAGCG CCCGACTGGGCGGCGCTCATGTGCGCCATATKCTTCGGCGAGGCGCCGGAGATGCCGSCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGSCCVSGCGGCGCGCGTCGGTCGGCGAGCTGCTCGASCACCCGTTCATCGCCGAGCGGSACG CSCCGATGCGSA CGCTCCGCTCGC ]
[-] EMBL CB656880 [ CGCCGACGTGTGGAGCCTCGGGTTAGCGATCCTTGAGCTGTACCTCGGCCACTTCCCGCTTCTCCCCGTGGGGCAGCGCCCCGACTGGGCGGCGCTCATGTGCGCCATATGATTCGGCGAGGCGCCGGAGATGCCGGCCGCCGCGTCGGAGGAGTTCCGGGACTTCGTGTCGCGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGTTGCTCGAGCACCCGTTCATCGCGGAGCGGGACGCCGCTGATGCGCAGCGCT CGCTGGCCGCGCTAGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCCAATGGA GCCGCCGGTTAAATTATCTCGGCAGATTTAGGAACCAATCAGAGATGTCGCGTACATAATCTTTGCCACGTGGACGAACAGCTTGGTCCCGTGTGTTTTTTTCTTCCTCTCTGTTCACTTCTTGC ]
[+] EMBL BI811689 [ CGACTGGGCGGCGCTCATGTGCGCCATATGCTTCGGCGAGGCGCCGGAGAT CCCGCCCCCGCGTCGGAGGAGTTCCGGGACTTC TGTCGCGGT CCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTCGCCGCGCTCGTCGCCGAGGCGGAGCAGAGCGGCGATCTATAGCC ATCGACGCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTT CCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTT GCC C AATTGTAAGACAC ATTTTGTCAAATCGTAATGAGAGACTAAAGAGTCTAGTTCAATTGTCTGAAAAAA]
[+] EMBL BI813825 [ GCGGCGCTCATGTGCCCCATATGCTTCGGCGAGGCGCCGGAGAT CC GCC CCGCGTCGGAGGAGTTCCGGGACTTCGTGTC CGGTGCCTCGAGAAGAAGGCCGGGCGGCGCGCGTCGGTCGGCGAGCTGCTCGAGCACCCGTTCATCGCCGAGCGGGACGCCGCCGATGCGCAGCGCT CGCTC CCGCGCTCGTCGCCGAGGCGGAGCAGA CGGCGATCTATAGCCAATCGA GCCGCCGGTTAAATTAACTCTGCAGATTTAGGAACCAATCAGAGATGACGTGTACATAATCTCTGCCACGTGGACGAACAGCTTTGTCCCGTGTGTTTTTTTCTTCCTCTCTTTTCACTTCTTGCCATCCAAGGATTTGTTTGTTTTTTAAGTTCGTTCTTGGC CAAATTGTAAGACACAATTTTGTGCAATCGTAATGAGAGACTAAAGAGTCTAGTTCAAaaaaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||