cluster # 12816

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Oryza sativa
cluster # 12816 cluster # 12816 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12816#0 length = 2236 sequences # 8

consensus_12816#1 length = 680 sequences # 1
consensus_12816#2 length = 605 sequences # 2

consensusID : consensus_12816#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2236
fasta sequence

                              [CTCCCACCTTTCTCGCGCCCCCATTGGATTGGGGGCGTCCGCCATTGATGACCAGCTCCGAATCTAGTACGGCGAATCGCCCGCGGCAAGGAGCAGCGTCGCCGTCGCCCGTGGATCGCCGGGAGCCCGGAGGGAGGCGGCGATGGCGGGCGCGGAGGCCGCCAATGGCAGGAACAAGTACGCGGTTCTTGATCCCAGCGACGAGCCGGAGGGGCGGAGGAGGCCCTCGGCGTGGGAGCGGAGGAGCAAGGAGCGGTTCGTGCTCGCCTGCGCCATCTTCGCCTCGCTCAACGCCATCCTCCTCGGCTACGATGTTGGTGTAATGAGTGGCGCAATAATCTACATTCAGAAAGATCTTCACATTACCGAATTTCAGGAAGAAATCCTAGTTGGTTGCTTGAGTGTGGTTTCACTCTTGGGAAGTCTGTCAGGAGGAAGAACATCTGATGCAATTGGCAGGAAATGGACAATGGCTCTTGGTGCAATTGTCTTCCAGGCTGGTGCAGCCATAATGACGTTCGCCCCTTCATTCACCGTGCTCATGATCGGGAGGCTCCTTGCTGGTGTGGGCATTGGCTTTGGTGCCATGGTATCTGCAGTCTATATCGCTGAGATATCCCCTGCAGCTGCCCGTGGGACTCTCACATCCCTCCCTGAGATCTGTATCAATTTAGGGATCCTCCTTGGTTATGTTTCCAACTATGCTTTCTCGGGCCTTTCAGAGCATATCAATTGGAGGATTATGCTTGGTGTTGGTATCCTCCCATCTGTCTTCATTGGATTTGCACTTTTTGTGATCCCAGAATCACCCAGGTGGTTGATGATGGAAAAGAGAGTTCCAGAAGCCAGGGCAGTATTGCTGCAGATAAGTGAGTCTGAAGCTGAGGTTGAAGAAAGGATTGCTGAGATTGAGGAAGCTGCAAATCTTCTTAAATCGACGAAATCCGAGGACAAGGCAGTGTGGATGGAGCTGTTGAACCCTTCTCCTGCTGTTCGTCGGATGCTATATGCTGGCTGTGGTATCCAAATGTTCCAGCAGATCACGGGTATTGATGCTACTGTCTATTACAGCCCAACTATTTTCAGAGATGCCGGGATCAAGTCTGATCAGGAGCTTCTTGCAGCCACAGTGGCTGTTGGTTTTACTAAGACAGTGTTCATATTGGTTGCAATTTTCCTCATTGATAAAGTTGGACGCAAACCGCTTCTTTATGTTAGCACCATTGGAATGACTATGTGCTTATTTGTCTTGGGGATTGCACTCACATTGCAAAAGCATGCCATGGGACTTATTTCTCCAAGAATTGGGATTGACCTAGCAGTTTTTGCAGTTTGTGGAAATGTGGCTTTCTTTTCAATTGGCATGGGTCCAATATGTTGGGTCTTGTCTTCAGAGATATTTCCTTTGAGATTACGAGCTCAAGCATCGGCACTAGGTCAAGTAGGTGGTAGAGTGAGCAGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGC-GTGCCAGAAACGAAAGGGAAAACTCT-GGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAACATTTAATACAGAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTT-CCATCGCCTACGGGATTCTGAAA-TTCAGGTCTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACACGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTCCACCTACCAAAAAATATAGTTGTTGAAGTTCCTTATTCCACAGTTTAATTTTAATAGAGGAAGAGGTGTGTGATTTCCAACTGAATGAATTCTGTGTGATTCTTGATCCAGCTTTTTGATTTAGTCCTTCATGATATTGTAGTACTGTGGCTTTGTTGGTCTAGTATAAAACCTTCAAGACCATGCCATGTCTATAGCTTTGCATTGACGTGCAGAGTTCTGTAAATACCAGATTTGGATGATTCATTCTGTCAAATTAATTA]

[+] EMBL AK069679             [CTCCCACCTTTCTCGCGCCCCCATTGGATTGGGGGCGTCCGCCATTGATGACCAGCTCCGAATCTAGTACGGCGAATCGCCCGCGGCAAGGAGCAGCGTCGCCGTCGCCCGTGGATCGCCGGGAGCCCGGAGGGAGGCGGCGATGGCGGGCGCGGAGGCCGCCAATGGCAGGAACAAGTACGCGGTTCTTGATCCCAGCGACGAGCCGGAGGGGCGGAGGAGGCCCTCGGCGTGGGAGCGGAGGAGCAAGGAGCGGTTCGTGCTCGCCTGCGCCATCTTCGCCTCGCTCAACGCCATCCTCCTCGGCTACGATGTTGGTGTAATGAGTGGCGCAATAATCTACATTCAGAAAGATCTTCACATTACCGAATTTCAGGAAGAAATCCTAGTTGGTTGCTTGAGTGTGGTTTCACTCTTGGGAAGTCTGTCAGGAGGAAGAACATCTGATGCAATTGGCAGGAAATGGACAATGGCTCTTGGTGCAATTGTCTTCCAGGCTGGTGCAGCCATAATGACGTTCGCCCCTTCATTCACCGTGCTCATGATCGGGAGGCTCCTTGCTGGTGTGGGCATTGGCTTTGGTGCCATGGTATCTGCAGTCTATATCGCTGAGATATCCCCTGCAGCTGCCCGTGGGACTCTCACATCCCTCCCTGAGATCTGTATCAATTTAGGGATCCTCCTTGGTTATGTTTCCAACTATGCTTTCTCGGGCCTTTCAGAGCATATCAATTGGAGGATTATGCTTGGTGTTGGTATCCTCCCATCTGTCTTCATTGGATTTGCACTTTTTGTGATCCCAGAATCACCCAGGTGGTTGATGATGGAAAAGAGAGTTCCAGAAGCCAGGGCAGTATTGCTGCAGATAAGTGAGTCTGAAGCTGAGGTTGAAGAAAGGATTGCTGAGATTGAGGAAGCTGCAAATCTTCTTAAATCGACGAAATCCGAGGACAAGGCAGTGTGGATGGAGCTGTTGAACCCTTCTCCTGCTGTTCGTCGGATGCTATATGCTGGCTGTGGTATCCAAATGTTCCAGCAGATCACGGGTATTGATGCTACTGTCTATTACAGCCCAACTATTTTCAGAGATGCCGGGATCAAGTCTGATCAGGAGCTTCTTGCAGCCACAGTGGCTGTTGGTTTTACTAAGACAGTGTTCATATTGGTTGCAATTTTCCTCATTGATAAAGTTGGACGCAAACCGCTTCTTTATGTTAGCACCATTGGAATGACTATGTGCTTATTTGTCTTGGGGATTGCACTCACATTGCAAAAGCATGCCATGGGACTTATTTCTCCAAGAATTGGGATTGACCTAGCAGTTTTTGCAGTTTGTGGAAATGTGGCTTTCTTTTCAATTGGCATGGGTCCAATATGTTGGGTCTTGTCTTCAGAGATATTTCCTTTGAGATTACGAGCTCAAGCATCGGCACTAGGTCAAGTAGGTGGTAGAGTGAGCAGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGC GTGCCAGAAACGAAAGGGAAAACTCT GGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAACATTTAATACAGAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTT CCATCGCCTACGGGATTCTGAAA TTCAGGTCTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACACGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTCCACCTACCAAAAAATATAGTTGTTGAAGTTCCTTATTCCACAGTTTAATTTTAATAGAGGAAGAGGTGTGTGATTTCCAACTGAATGAATTCTGTGTGATTCTTGATCCAGCTTTTTGATTTAGTCCTTCATGATATTGTAGTACTGTGGCTTTGTTGGTCTAGTATAAAACCTTCAAGACCATGCCATGTCTATAGCTTTGCATTGACGTGCAGAGTTCTGTAAATACCAGATTTGGATGATTCATTCTGTCAAATTA    ]
[+] EMBL CB633160             [                                                             ATCTAGTACGGCGAATCGCCCGCGGCAAGGAGCAGCGTCGCCGTCGCCCGTGGATCGCCGGGAGCCCGGAGGGAGGCGGCGATGGCGGGCGCGGAGGCCGCCAATGGCAGGAACAAGTACGCGGTTCTTGATCCCAGCGACGAGCCGGAGGGGCGGAGGAGGCCCTCGGCGTGGGAGCGGAGGAGCAAGGAGCGGTTCGTGCTCGCCTGCGCCATCTTCGCCTCGCTCAACGCCATCCTCCTCGGCTACGATGTTGGTGTAATGAGTGGCGCAATAATCTACATTCAGAAAGATCTTCACATTACCGAATTTCAGGAAGAAATCCTAGTTGGTTGCTTGAGTGTGGTTTCACTCTTGGGAAGTCTGTCAGGAGGAAGAACATCTGATGCAATTGGCAGGAAATGGACAATGGCTCTTGGTGCAATTGTCTTCCAGGCTGGTGCAGCCATAATGACGTTCGCCCCTTCATTCACCGTGCTCATGATCGGGAGGCTCCTTGCTGGTGTGGGCATTGGCTTTGGTGCCATGGTATCTGCAGTCTATATCGCTGAGATATCCCCTGCAGCTGCCCGTGGGACTCTCACATCCCTCCCTGAGATCTGTATCAATTTAGGGATCCTCCTTGGTTATGTTTCCAACTATGCTTTCTCGGGCCTTTCAGAGCATATCAATTGGAGGATTATGCTTGGTGTTGGTATCCTCCCATCTGTCTTCATTGGATTTGCACTTTTTGTGATCCCAGAATCACCCAGGTGGTTGATGATGGAAAAGAGAGTTCCAGAAGCCAGGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF306062             [                                                                                                                                                                                                                                         GGGAGCGGAGGACCAAGGAGCGGTTCGTGCTCGCCTGCGCCATCTTCGCCTCGCTCAACGCCATCCTCCTCGGCTACGATGTTGGTGTAATGAGTGGCGCAATAATCTACATTCAGAAAGATCTTCACATTACCTTATTTCATGAAGAAATCCTAGTTGGTTGCTTGAGTGTGGTTT TCACTTGTGAAGTCTGTCAGGAGGAAGAACATCTGATGCAATTGGCAGGAAATGGACAATGGCTCTTGGTGCAATTGTCTTCCAGGCTGGTGCAGCCATAATGACGTTCGCCCCTTCATTCACCGTGCTCATGATCGGGAGGCTCCTTGCTGGTGTGGGCATTGGCTTTGGTGCCATGGTATCTGCAGTCTATATCGCTGAGATATCCCCTGCAGCTGCCCGTGGGACTCTCACATCCCTCCCTGAGATCTGTATCAATTTAGGGATCCTCCTTGGTTATGTTTCCAACTATGCTTTCTCGGGCCTTTCAGAGCATATCAATTGGAGGATTATGCTTGGTGTTGGTATCCTCCCATCTGTCTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK101735             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAATTGTCTTCCAGGCTGGTGCAGCCATAATGACGTTCGCCCCTTCATTCACCGTGCTCATGATCGGGAGGCTCCTTGCTGGTGTGGGCATTGGCTTTGGTGCCATGGTATCTGCAGTCTATATCGCTGAGATATCCCCTGCAGCTGCCCGTGGGACTCTCACATCCCTCCCTGAGATCTGTATCAATTTAGGGATCCTCCTTGGTTATGTTTCCAACTATGCTTTCTCGGGCCTTTCAGAGCATATCAATTGGAGGATTAT CTTGGTGTTGGTATCCTCCCATCTGTCTTCATTGGATTTGCACTTTTTGTGATCCCAGAATCACCCAGGTGGTTGATGATGGAAAAGAGAGTTCCAGAAGCCAGGGCAGTATTGCTGCAGATAAGTGAGTCTGAAGCTGAGGTTGAAGAAAGGATTGCTGAGATTGAGGAAGCTGCAAATCTTCTTAAATCGACGAAATCCGAGGACAAGGCAGTGTGGATGGAGCTGTTGAACCCTTCTCCTGCTGTTCGTCGGATGCTATATGCTGGCTGTGGTATCCAAATGTTCCAGCAGATCACGGGTATTGATGCTACTGTCTATTACAGCCCAACTATTTTCAGAGATGCCGGGATCAAGTCTGATCAGGAGCTTCTTGCAGCCACAGTGGCTGTTGGTTTTACTAAGACAGTGTTCATATTGGTTGCAATTTTCCTCATTGATAAAGTTGGACGCAAACCGCTTCTTTATGTTAGCACCATTGGAATGACTATGTGCTTATTTGTCTTGGGGATTGCACTCACATTGCAAAAGCATGCCATGGGACTTATTTCTCCAAGAATTGGGATTGACCTAGCAGTTTTTGCAGTTTGTGGAAATGTGGCTTTCTTTTCAATTGGCATGGGTCCAATATGTTGGGTCTTGTCTTCAGAGATATTTCCTTTGAGATTACGAGCTCAAGCATCGGCACTAGGTCAAGTAGGTGGTAGAGTGAGCAGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGC GTGCCAGAAACGAAAGGGAAAACTCT GGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAACATTTAATACAGAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTT CCATCGCCTACGGGATTCTGAAA TTCAGGTCTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACACGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTCCACCTACCAAAAAATATAGTTGTTGAAGTTCCTTATTCCACAGTTTAATTTTAATAGAGGAAGAGGTGTGTGA                                                                                                                                                                                              ]
[+] EMBL OS1321739            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAAGCATGCCATGGGACTTATTTCTCCAAGAATTGGGATTGACCTAGCAGTTTTTGCAGTTTGTGGAAATGTGGCTTTCTTTTCAATTGGCATGGGTCCAATATGTTGGGTCTTGTCTTCAGAGATATTTCCTTTGAGATTACGAGCTCAAGCATCGGCACTAGGTCAAGTAGGTGGTAGAGTGAGCAGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGCGGTGCCAG AACGAAAGGGAAAACTCTGGGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTTAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C73367               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GATTACGAGCTCAAGCATCGGCACTAGGTCAAGTAGGTGGTAGAGTGAGCAGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGC GTGCCAGAAACGAAAGGGAAAACTCT GGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAACATTTAATACAGAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAANCAGTAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCCATCGNCTACGGGATTCTAAAATTTCAGGTCTGa                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB633161             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGTGGTAGAGTGAGCAGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGC GTGCCAGAAACGAAAGGGAAAACTCT GGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAACATTTAATACAGAGCAGCAAGAAGTCTGTGTTTTTAGGCTGACACTATTAGAAACAATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTT CCATCGCCTACGGGATTTTGAAA TTCAGGTTTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACACGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTTTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATTTTCCACCTACCAAAAAATATAGTTGTTGAAGTTCCTTATTCCACAGTTTAATTTTAATAGAGGAAGAGGTGTGTGATTTCCAACTGAATGAATTCTGTGTGATTCTTGATCCAGCTTTTTGATTTAGTCCTTCATGATATTGTAGTACTGTGGCTTTGTTGGTTTAGTATAAAACCTTCAAGACCATGCCATGTTTATAGCTTTGCATTGACGTGCAGAGTTCTGTAAATACCAGATTTGAAAGATTCATTCTGTCAAATTAATTA]
[+] EMBL CA766835             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AACATTTAATACAGAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTT CCATCGCCTACGGGATTCTGAAA TTCAGGTCTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACACGAGTATATTAGGTGTAGGCGCTAAACAGCATGTAAATGTCTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTCCACCTACCAAAAAATATAGTTGTTGAAGTTCCTTATTCCACAGTTTAATTTTAATAGAGGAAGAGGTGTGTGATTTCCAACTGAATGAATTCTGTGTGATTCTTGATCCAGCTTTTTGATTTAGTCCTTCATGATATTGTAGTACTGTGGCTTTGTTGGTCTAGTATAAAACCTTCAAGACCATGCCATGTCTATAGCTTTGCATTGACGTGCAGAGTTCTGTAAATACCAGATTTGGATGATTCATTCTGTC          ]




>consensus_12816#0
CTCCCACCTTTCTCGCGCCCCCATTGGATTGGGGGCGTCCGCCATTGATGACCAGCTCCG
AATCTAGTACGGCGAATCGCCCGCGGCAAGGAGCAGCGTCGCCGTCGCCCGTGGATCGCC
GGGAGCCCGGAGGGAGGCGGCGATGGCGGGCGCGGAGGCCGCCAATGGCAGGAACAAGTA
CGCGGTTCTTGATCCCAGCGACGAGCCGGAGGGGCGGAGGAGGCCCTCGGCGTGGGAGCG
GAGGAGCAAGGAGCGGTTCGTGCTCGCCTGCGCCATCTTCGCCTCGCTCAACGCCATCCT
CCTCGGCTACGATGTTGGTGTAATGAGTGGCGCAATAATCTACATTCAGAAAGATCTTCA
CATTACCGAATTTCAGGAAGAAATCCTAGTTGGTTGCTTGAGTGTGGTTTCACTCTTGGG
AAGTCTGTCAGGAGGAAGAACATCTGATGCAATTGGCAGGAAATGGACAATGGCTCTTGG
TGCAATTGTCTTCCAGGCTGGTGCAGCCATAATGACGTTCGCCCCTTCATTCACCGTGCT
CATGATCGGGAGGCTCCTTGCTGGTGTGGGCATTGGCTTTGGTGCCATGGTATCTGCAGT
CTATATCGCTGAGATATCCCCTGCAGCTGCCCGTGGGACTCTCACATCCCTCCCTGAGAT
CTGTATCAATTTAGGGATCCTCCTTGGTTATGTTTCCAACTATGCTTTCTCGGGCCTTTC
AGAGCATATCAATTGGAGGATTATGCTTGGTGTTGGTATCCTCCCATCTGTCTTCATTGG
ATTTGCACTTTTTGTGATCCCAGAATCACCCAGGTGGTTGATGATGGAAAAGAGAGTTCC
AGAAGCCAGGGCAGTATTGCTGCAGATAAGTGAGTCTGAAGCTGAGGTTGAAGAAAGGAT
TGCTGAGATTGAGGAAGCTGCAAATCTTCTTAAATCGACGAAATCCGAGGACAAGGCAGT
GTGGATGGAGCTGTTGAACCCTTCTCCTGCTGTTCGTCGGATGCTATATGCTGGCTGTGG
TATCCAAATGTTCCAGCAGATCACGGGTATTGATGCTACTGTCTATTACAGCCCAACTAT
TTTCAGAGATGCCGGGATCAAGTCTGATCAGGAGCTTCTTGCAGCCACAGTGGCTGTTGG
TTTTACTAAGACAGTGTTCATATTGGTTGCAATTTTCCTCATTGATAAAGTTGGACGCAA
ACCGCTTCTTTATGTTAGCACCATTGGAATGACTATGTGCTTATTTGTCTTGGGGATTGC
ACTCACATTGCAAAAGCATGCCATGGGACTTATTTCTCCAAGAATTGGGATTGACCTAGC
AGTTTTTGCAGTTTGTGGAAATGTGGCTTTCTTTTCAATTGGCATGGGTCCAATATGTTG
GGTCTTGTCTTCAGAGATATTTCCTTTGAGATTACGAGCTCAAGCATCGGCACTAGGTCA
AGTAGGTGGTAGAGTGAGCAGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTAT
TATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTT
TGTGTATTTCTGCGTGCCAGAAACGAAAGGGAAAACTCTGGAGCAGATTGAGATGATGTT
TGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAACATTTAAT
ACAGAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAATTCGAAA
TCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCATCGCCTACGGGATTCTGA
AATTCAGGTCTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAAC
ACGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAACTACAT
CCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTCCACCTAC
CAAAAAATATAGTTGTTGAAGTTCCTTATTCCACAGTTTAATTTTAATAGAGGAAGAGGT
GTGTGATTTCCAACTGAATGAATTCTGTGTGATTCTTGATCCAGCTTTTTGATTTAGTCC
TTCATGATATTGTAGTACTGTGGCTTTGTTGGTCTAGTATAAAACCTTCAAGACCATGCC
ATGTCTATAGCTTTGCATTGACGTGCAGAGTTCTGTAAATACCAGATTTGGATGATTCAT
TCTGTCAAATTAATTA

consensusID : consensus_12816#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 680
fasta sequence

                              [CTTTGAGATTACGAGGTCCAAGCATCGGCACTTAGGTCAAGTAGGTGGTANAGTGANCAGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGCGTGCCAGAAACGAAAGGGAAAACTNTGGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACCCAACATTTAATACAGAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACNCTATTAGAAACNATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCATCGCCTACGGGATTNTGAAATTCAGGTNTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACNCGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGGACNCAGATGATGTTGTATATGGCGGTATCTTCCNCCTACCAAAAAATATAGTTGTTNAAGTTCCTTATTCCNCAGTTTAATTTTAATAGAGGAANAGGTGTGTGATTTCCAACTGAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU094283             [CTTTGAGATTACGAGGTCCAAGCATCGGCACTTAGGTCAAGTAGGTGGTANAGTGANCAGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGCGTGCCAGAAACGAAAGGGAAAACTNTGGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACCCAACATTTAATACAGAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACNCTATTAGAAACNATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCATCGCCTACGGGATTNTGAAATTCAGGTNTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACNCGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGGACNCAGATGATGTTGTATATGGCGGTATCTTCCNCCTACCAAAAAATATAGTTGTTNAAGTTCCTTATTCCNCAGTTTAATTTTAATAGAGGAANAGGTGTGTGATTTCCAACTGAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12816#1
CTTTGAGATTACGAGGTCCAAGCATCGGCACTTAGGTCAAGTAGGTGGTANAGTGANCAG
TGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTT
CTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGCGTGCCAGA
AACGAAAGGGAAAACTNTGGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAG
AGGGAGTGAGATAGAGCTTGAGGATACCCAACATTTAATACAGAGCAGCAAGAAGTCTGT
GTCTCTAGGCTGACNCTATTAGAAACNATAAATTCGAAATCATTCGATGTTCAATGATGA
ACCATACTTATCCTGCTTCCATCGCCTACGGGATTNTGAAATTCAGGTNTGCAAAATGAT
CAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACNCGAGTATATTAGGTGTAGGC
GCAAAACAGCATGTAAATGTCTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGG
ACNCAGATGATGTTGTATATGGCGGTATCTTCCNCCTACCAAAAAATATAGTTGTTNAAG
TTCCTTATTCCNCAGTTTAATTTTAATAGAGGAANAGGTGTGTGATTTCCAACTGAAAAA
AAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12816#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 605
fasta sequence

                              [GCTCAAGCATCGGCACTAGGTCAAAGTAGTGGTAGAGTGAGCANGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCC-TTTGTGTATTTCTGCGTGCCAGAAACGAAAGGGAAAACTCTGGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAACACTTTAATACCACGAGCAGC-CAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCATCGCCTACGGGATTCTGAAATTCAGGTCTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACACGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTCCACCTA-CCAAAAAATATAGTTGTTGAAGTTCCTTAAAAAAAAAAA]

[+] EMBL BQ908867             [GCTCAAGCATCGGCACTAGGTCAAAGTAGTGGTAGAGTGAGCANGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCC TTTGTGTATTTCTGCGTGCCAGAAACGAAAGGGAAAACTCTGGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAACACTTTAATACCACGAGCAGC CAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCATCGCCTACGGGATTCTGAAATTCAGGTCTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACACGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTCCACCTA CCAAAAAATATAGTTGTTGAAGTTCCTTAAAAAAAAAAA]
[+] EMBL BI811088             [                                                                                                                        TATCTCGACTGTCTCT TGCCCATTTGTGTATTTCTGCGTGCCAGAAACGAAAGGG  AACTCTGGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACCACATGTTAATAC  CGAGCAGCACAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCATCGCCTACGGGATTCTGAAATTCAGGTCTGCCAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGGCTTAACACGAGTATATTAGGTGTAGGCGC AAACAGCATGTAAATGTCTGCTTTACACAACTACATCCC AAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTCCACCTACCCAAAAAATATAGTTGTTGAAGTTCCTTAAAAAAAAA  ]




>consensus_12816#2
GCTCAAGCATCGGCACTAGGTCAAAGTAGTGGTAGAGTGAGCANGTGGTTTGGTTTCCAT
GTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGT
TATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGCGTGCCAGAAACGAAAGGGAAAAC
TCTGGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGA
GCTTGAGGATACACAACACTTTAATACCACGAGCAGCCAGAAGTCTGTGTCTCTAGGCTG
ACACTATTAGAAACAATAAATTCGAAATCATTCGATGTTCAATGATGAACCATACTTATC
CTGCTTCCATCGCCTACGGGATTCTGAAATTCAGGTCTGCAAAATGATCAGGCTGCCTTG
GACTGCTACGGATTTTGAGGGCTTAACACGAGTATATTAGGTGTAGGCGCAAAACAGCAT
GTAAATGTCTGCTTTACACAACTACATCCCAAAATGTTACCTGGGAGGACACAGATGATG
TTGTATATGGCGGTATCTTCCACCTACCAAAAAATATAGTTGTTGAAGTTCCTTAAAAAA
AAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12816#0      CTCCCACCTTTCTCGCGCCCCCATTGGATTGGGGGCGTCCGCCATTGATGACCAGCTCCG 60
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      AATCTAGTACGGCGAATCGCCCGCGGCAAGGAGCAGCGTCGCCGTCGCCCGTGGATCGCC 120
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      GGGAGCCCGGAGGGAGGCGGCGATGGCGGGCGCGGAGGCCGCCAATGGCAGGAACAAGTA 180
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      CGCGGTTCTTGATCCCAGCGACGAGCCGGAGGGGCGGAGGAGGCCCTCGGCGTGGGAGCG 240
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      GAGGAGCAAGGAGCGGTTCGTGCTCGCCTGCGCCATCTTCGCCTCGCTCAACGCCATCCT 300
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      CCTCGGCTACGATGTTGGTGTAATGAGTGGCGCAATAATCTACATTCAGAAAGATCTTCA 360
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      CATTACCGAATTTCAGGAAGAAATCCTAGTTGGTTGCTTGAGTGTGGTTTCACTCTTGGG 420
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      AAGTCTGTCAGGAGGAAGAACATCTGATGCAATTGGCAGGAAATGGACAATGGCTCTTGG 480
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      TGCAATTGTCTTCCAGGCTGGTGCAGCCATAATGACGTTCGCCCCTTCATTCACCGTGCT 540
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      CATGATCGGGAGGCTCCTTGCTGGTGTGGGCATTGGCTTTGGTGCCATGGTATCTGCAGT 600
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      CTATATCGCTGAGATATCCCCTGCAGCTGCCCGTGGGACTCTCACATCCCTCCCTGAGAT 660
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      CTGTATCAATTTAGGGATCCTCCTTGGTTATGTTTCCAACTATGCTTTCTCGGGCCTTTC 720
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      AGAGCATATCAATTGGAGGATTATGCTTGGTGTTGGTATCCTCCCATCTGTCTTCATTGG 780
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      ATTTGCACTTTTTGTGATCCCAGAATCACCCAGGTGGTTGATGATGGAAAAGAGAGTTCC 840
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      AGAAGCCAGGGCAGTATTGCTGCAGATAAGTGAGTCTGAAGCTGAGGTTGAAGAAAGGAT 900
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      TGCTGAGATTGAGGAAGCTGCAAATCTTCTTAAATCGACGAAATCCGAGGACAAGGCAGT 960
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      GTGGATGGAGCTGTTGAACCCTTCTCCTGCTGTTCGTCGGATGCTATATGCTGGCTGTGG 1020
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      TATCCAAATGTTCCAGCAGATCACGGGTATTGATGCTACTGTCTATTACAGCCCAACTAT 1080
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      TTTCAGAGATGCCGGGATCAAGTCTGATCAGGAGCTTCTTGCAGCCACAGTGGCTGTTGG 1140
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      TTTTACTAAGACAGTGTTCATATTGGTTGCAATTTTCCTCATTGATAAAGTTGGACGCAA 1200
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      ACCGCTTCTTTATGTTAGCACCATTGGAATGACTATGTGCTTATTTGTCTTGGGGATTGC 1260
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      ACTCACATTGCAAAAGCATGCCATGGGACTTATTTCTCCAAGAATTGGGATTGACCTAGC 1320
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      AGTTTTTGCAGTTTGTGGAAATGTGGCTTTCTTTTCAATTGGCATGGGTCCAATATGTTG 1380
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      GGTCTTGTCTTCAGAGATATTTCCTTTGAGATTACGAGCTC-AAGCATCGGCACT-AGGT 1438
consensus_12816#2      -------------------------------------GCTC-AAGCATCGGCACT-AGGT 21
consensus_12816#1      -----------------------CTTTGAGATTACGAGGTCCAAGCATCGGCACTTAGGT 37
                                                            * ** ************* ****

consensus_12816#0      CAAGTAGGTGGTAGAGTGAGCAG-TGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCG 1497
consensus_12816#2      CAAAGTAGTGGTAGAGTGAGCANGTGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCG 81
consensus_12816#1      CAAGTAGGTGGTANAGTGANCAG-TGGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCG 96
                       ***    ****** ***** **  ************************************

consensus_12816#0      TATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGC 1557
consensus_12816#2      TATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGC 141
consensus_12816#1      TATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGC 156
                       ************************************************************

consensus_12816#0      CTTTGTGTATTTCTGCGTGCCAGAAACGAAAGGGAAAACTCTGGAGCAGATTGAGATGAT 1617
consensus_12816#2      CTTTGTGTATTTCTGCGTGCCAGAAACGAAAGGGAAAACTCTGGAGCAGATTGAGATGAT 201
consensus_12816#1      CTTTGTGTATTTCTGCGTGCCAGAAACGAAAGGGAAAACTNTGGAGCAGATTGAGATGAT 216
                       **************************************** *******************

consensus_12816#0      GTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAACA-TT 1676
consensus_12816#2      GTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAACACTT 261
consensus_12816#1      GTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACCCAACA-TT 275
                       *************************************************** ***** **

consensus_12816#0      TAATACA--GAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAAT 1734
consensus_12816#2      TAATACCACGAGCAGCCAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAAT 321
consensus_12816#1      TAATACA--GAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACNCTATTAGAAACNATAAAT 333
                       ******   ******* ************************ *********** ******

consensus_12816#0      TCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCATCGCCTACGGGA 1794
consensus_12816#2      TCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCATCGCCTACGGGA 381
consensus_12816#1      TCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCATCGCCTACGGGA 393
                       ************************************************************

consensus_12816#0      TTCTGAAATTCAGGTCTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGG 1854
consensus_12816#2      TTCTGAAATTCAGGTCTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGG 441
consensus_12816#1      TTNTGAAATTCAGGTNTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGGG 453
                       ** ************ ********************************************

consensus_12816#0      CTTAACACGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAA 1914
consensus_12816#2      CTTAACACGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAA 501
consensus_12816#1      CTTAACNCGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACAA 513
                       ****** *****************************************************

consensus_12816#0      CTACATCCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTCC 1974
consensus_12816#2      CTACATCCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTCC 561
consensus_12816#1      CTACATCCCAAAATGTTACCTGGGAGGACNCAGATGATGTTGTATATGGCGGTATCTTCC 573
                       ***************************** ******************************

consensus_12816#0      ACCTACCAAAAAATATAGTTGTTGAAGTTCCTTATTCCACAGTTTAATTTTAATAGAGGA 2034
consensus_12816#2      ACCTACCAAAAAATATAGTTGTTGAAGTTCCTTAAAAAAAAAAA---------------- 605
consensus_12816#1      NCCTACCAAAAAATATAGTTGTTNAAGTTCCTTATTCCNCAGTTTAATTTTAATAGAGGA 633
                        ********************** **********      *                   

consensus_12816#0      AGAGGTGTGTGATTTCCAACTGAATGAATTCTGTGTGATTCTTGATCCAGCTTTTTGATT 2094
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ANAGGTGTGTGATTTCCAACTGAAAAAAAAAAAAAAAAAAAAAAAAA------------- 680
                                                                                   

consensus_12816#0      TAGTCCTTCATGATATTGTAGTACTGTGGCTTTGTTGGTCTAGTATAAAACCTTCAAGAC 2154
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      CATGCCATGTCTATAGCTTTGCATTGACGTGCAGAGTTCTGTAAATACCAGATTTGGATG 2214
consensus_12816#2      ------------------------------------------------------------
consensus_12816#1      ------------------------------------------------------------
                                                                                   

consensus_12816#0      ATTCATTCTGTCAAATTAATTA 2236
consensus_12816#2      ----------------------
consensus_12816#1      ----------------------