cluster # 12823

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Oryza sativa
cluster # 12823 cluster # 12823 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12823#0 length = 2019 sequences # 9

consensus_12823#1 length = 817 sequences # 2

consensusID : consensus_12823#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2019
fasta sequence

                              [CACACACGCGTAAACGACGACACGCGCGCCGGCGCCATGGGCCTCCCCGGCCGGCGCAACCCGTTGCTGAGCGCGAGGCG-CGCGGCGGCGTCCCTCCGGAGGAGCA-GACGGCTGCCCGTCTATGTCGCCGCAGTCTTCTTCGTCGCCTCCGTCCTCCTCATGTTCCGCGACGAGATCCTTTATCTGACGACGGCAAGGTCGCCGTCGTCGTCGTTGCCGACAACGGGAGGATCAGCCGGCGGCGCC-GGGCTCGCCCGGAAGGAGGAGCTAGTATCTGTCAACAAGCCAGTCTTGCTTGGTCACGGCGGCAAACCGGAGAAGCACCACAGCGTGACGGAGAGGCACCGGCCGAAGGTC-AGCGCGAAGAGG-CGGCCGAACAAGAAGGCGGCCAAGGCGGCGAGGAAGAAGTTCATGGCGTCGCCGTCGGTCGCCGCCGGCGCCGAGGTGAACGTGCCGGAGACGTGCAACCTGTCCAAGGGCAAGTGGGTGTTCGACAACGCGACGTACCCGCTGTACCGC-GAGCAGGAGTGCGAGTACCTGACGGCGCAGGTGACGTGCACGCGGAACGGGCGGCGCGACGACGGCTACCAGAAGTGGCGGTGGCAGCCGAGGGACTGCGACCTCCCGCTCGCCTTCGACGCGAGGCTGTTCATGGAGCGGCTCCGCGGGAAGCGCCTCATGTTCGTCGGCGACTCGCTGAACCGCAACCAGTGGGAGTCCATGGTGTGCCTGGTGCGGCCGGCGCTGTCGCCGGGGAAGAGCTACGTGACGTGGTGGGACGGCCAGCGGGTCGTCCTCCACGCTTGGGAGTACAACGCGACTGTGGAGTTCTACTGGGCGCCGTTCCTCGTCGAGTCCAACTCCGACGACCCCAAGGCGCACAGCATCCGGGACCGCGTCATCAAGCCCGAGGCGATCGCCGCGCACGCCGGCGACTGGGTCGGCGTCGACTACCTCGTCTTCAACACGTACATCTGGTGGATGAACACGGTCAACATGAAAGTCGTGAGGCCGACGGGGAAGACGTGGGAGGAGTACGACGAGGTGGGTCGGATCGAGGCGTACAGGAGAGTGCTCGACACATGGGCGACCTGGGTGAACGACAACGTCGACCCGGCCCGCACGTCCGTGTTCTTCATGAGCGTCTCCCCTCTTCACATCAGCCCGGAGGCGTGGGGCAACCCGGGCGGGGTGCGGTGCGCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGCCCGCTGTGGCTGGGCACGGACTGGGACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCCGCGGGGCGCGTCCCGGTCACGTTCGTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGACGGGCACACGTCGGTGCACACCATCCGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCCGACCCGGCCACGTACGCGGACTGCATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGGAACCTCATGCTCTACGCCCGTATCCTCTCCAGGCCGCCGGCGGCGGCCGGTCACGTGGCGTGACCGACCATATGTGTACAGATACTGTTTGTTTGTTTGTTCGTTCGTTGATGGGTTGCCAGCTGCCTGCACGGTTAGTTTTAGTTTTTGCCTTTCGCTTTTGTTGCTTCTCGATTATTATTTTCTCATATGCGAGATATAAAGGAGGTGGTTGGTGGCGATCGAGGTGATTGATGGTCATGTGACGCAACATTCTTGACCGGATTGTGTGGCACGAGTTAAGCGGGGAACATCTGCAGTAGTAGTAGTTACATGGTTGAAGGGGCGTGCGCCGTGGCGCGACGCGAATAAATGTCGTGTGACGGTGTGAGCGAGTACCGTGTAGATAGAAGGGCAGAATAGATATTCCAACACTCAGATTTACACAGCTTATTACTTCTGTAATACTCCATGAAATTTGTTATTCTTTTATCAATACTAGAAAAATGCCCGTGCATTGTAACGGATAAATGCGTTGTTTTTTTTCCAGTGGTACGATCTATC]

[+] EMBL CB644555             [CACACACGCGTAAACGACGACACGCGCGCCGGCGCCATGGGCCTCCCCGGCCGGCGCAACCCGTTGCTGAGCGCGAGGCG CGCGGAGGCGTCCCTCCGGAGGAGCA CACCGCTGCCCGTCTATGTCGCCGCAGTCTTCTTCATCGCCTCCGTCCTCCTCATGTTCCGCGACGAGATCCTTTATCTGACGACGGCAAGGTCGCCGACGTCCTCGTTGCCGACAACGGGAGGATCAGCCGGCGGCGCC TGGCTCACCCGGAAGGAGGAGCTAGTATCTGTCTACAAACCAATCTTGCTTGGTCACGGCGGCTAACCGGAGAATCACCACAGCGTGACCGAGAGGCACCGGCCGAAGGTC ATCGCGAAGAGG CGGCCGAACAACAAGGCGGCCAAGGCGGCGAGGAAGAAGTTCATGGCGTCGCCGTCGGTCGCCGACGGCGCCGAGGTGAACGTGCCGGAGACGTGCAACCTGTCCAATGGCAAGTGGGTGTTCGACAACGCAACGTACCCGCTGTACCGCTCAGCAGGAGTGCGAGTACCTGACTGCGCACGTGACGTGCACACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK065359             [  CACACGCGTAAACGACGACACGCGCGCCGGCGCCATGGGCCTCCCCGGCCGGCGCAACCCGTTGCTGAGCGCGAGGCG CGCGGCGGCGTCCCTCCGGAGGAGCA GACGGCTGCCCGTCTATGTCGCCGCAGTCTTCTTCGTCGCCTCCGTCCTCCTCATGTTCCGCGACGAGATCCTTTATCTGACGACGGCAAGGTCGCCGTCGTCGTCGTTGCCGACAACGGGAGGATCAGCCGGCGGCGCC GGGCTCGCCCGGAAGGAGGAGCTAGTATCTGTCAACAAGCCAGTCTTGCTTGGTCACGGCGGCAAACCGGAGAAGCACCACAGCGTGACGGAGAGGCACCGGCCGAAGGTC AGCGCGAAGAGG CGGCCGAACAAGAAGGCGGCCAAGGCGGCGAGGAAGAAGTTCATGGCGTCGCCGTCGGTCGCCGCCGGCGCCGAGGTGAACGTGCCGGAGACGTGCAACCTGTCCAAGGGCAAGTGG  GTTCGACAACGCGACGTACCCGCTGTACCGC GAGCAGGAGTGCGAGTACCTGACGGCGCAGGTGACGTGCACGCGGAACGGGCGGCGCGACGACGGCTACCAGAAGTGGCGGTGGCAGCCGAGGGACTGCGACCTCCCGCTCGCCTTCGACGCGAGGCTGTTCATGGAGCGGCTCCGCGGGAAGCGCCTCATGTTCGTCGGCGACTCGCTGAACCGCAACCAGTGGGAGTCCATGGTGTGCCTGGTGCGGCCGGCGCTGTCGCCGGGGAAGAGCTACGTGACGTGGTGGGACGGCCAGCGGGTCGTCCTCCACGCTTGGGAGTACAACGCGACTGTGGAGTTCTACTGGGCGCCGTTCCTCGTCGAGTCCAACTCCGACGACCCCAAGGCGCACAGCATCCGGGACCGCGTCATCAAGCCCGAGGCGATCGCCGCGCACGCCGGCGACTGGGTCGGCGTCGACTACCTCGTCTTCAACACGTACATCTGGTGGATGAACACGGTCAACATGAAAGTCGTGAGGCCGACGGGGAAGACGTGGGAGGAGTACGACGAGGTGGGTCGGATCGAGGCGTACAGGAGAGTGCTCGACACATGGGCGACCTGGGTGAACGACAACGTCGACCCGGCCCGCACGTCCGTGTTCTTCATGAGCGTCTCCCCTCTTCACATCAGCCCGGAGGCGTGGGGCAACCCGGGCGGGGTGCGGTGCGCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGCCCGCTGTGGCTGGGCACGGACTGGGACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCCGCGGGGCGCGTCCCGGTCACGTTCGTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGACGGGCACACGTCGGTGCACACCATCCGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCCGACCCGGCCACGTACGCGGACTGCATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGGAACCTCATGCTCTACGCCCGTATCCTCTCCAGGCCGCCGGCGGCGGCCGGTCACGTGGCGTGACCGACCATATGTGTACAGATACTGTTTGTTTGTTTGTTCGTTCGTTGATGGGTTGCCAGCTGCCTGCACGGTTAGTTTTAGTTTTTGCCTTTCGCTTTTGTTGCTTCTCGATTATTATTTTCTCATATGCGAGATATAAAGGAGGTGGTTGGTGGCGATCGAGGTGATTGATGGTCATGTGACGCAACATTCTTGACCGGATTGTGTGGCACGAGTTAAGCGGGGAACATCTGCAGTAGTAGTAGTTACATGGTTGAAGGGGCGTGCGCCGTGGCGCGACGCGAATAAATGTCGTGTGACGGTGTGAGCGAGTACCGTGTAGATAGAAGGGCAGAATAGATATTCCAACACTCAGATTTACACAGCTTATTACTTCTGTAATACTCCATGAAATTTGTTATTCTTTTATCAATACTAGAAAAATGCCCGTGCATTGTAACGGATAAATGCGTTGTTTTTTTTCCAGTGGTACGATCTATC]
[+] EMBL C73153               [  CACACGCGTAAACGACGACACGCGCGCCGGC NCATNGGCCTCCCCGGCCGGCGCAACCCGTTGCTGAGCGCGANGCG CNCGGCGGCGTCCCTCCGGAGGAGCANGACGGCTGCCCGTCTATNTCGCCGCAGTCTTCTTCGTCGCCTCCGTCCTCCTCATGTTCCGCGACGAGATCCTTTATCTGACGACGGCAAGGTCGCCGTCGTCGTCGTTGCCGACAACGGGAGGATCAGCCGGCGGCGCCGGGGCTCGCCCGGAAGGAGGAGCTAGTATCTGTCAACAAGCCAGTCTTGCTTGGTCACGGCGGCAAACCGGAGAAGCACCACAGCGTGACGGAGAGGCACCGGCCGAA GTCAAGCGNGAAGAGGACGGNCGAACAAGAANGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSS1280A             [           AAACGACGACACGCGCGCCGGCGCCATGGGCCTCCCCGGCCGGCGCAACCCGTTGCTGAGCGCNAGGCGTCG GNCGGCGTCCCTCCGGAGG GCANGACGGCTGCCCGTNTATNTCGCCGNAGTCTTCTTCGTCGCCTCCGTCCTCCTCATGTTCCGCGACGAGATCCTTTATCTAACGACGGCAAGGTCGNCGTCGTCGTCGTTGCCGACAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB641249             [                   ACACGCGCGCCGGCGCCATGGGCCTCCCCGGCCGGCGCAACCCGTTGCTGAGCGCGAGGCG CGCGGCGGCGTCCCTCCGGAGGAGCA GACGGCTGCCCGTCTATGTCGCCGCAGTCTTCTTCGTCGCCTCCGTCCTCCTCATGTTCCGCGACGAGATCCTTTATCTGACGACGGCAAGGTCGCCGTCGTCGTCGTTGCCGACAACGGGAGGATCAGCCGGCGGCGCC GGGCTCGCCCGGAAGGAGGAGCTAGTATCTGTCAACAAGCCAGTCTTGCTTGGTCACGGCGGCAAACCGGAGAAGCACCACAGCGTGACGGAGAGGCACCGGCCGAAGGTC AGCGCGAAGAGG CGGCCGAACAAGAAGGCGGCCAAGGCGGCGAGGAAGAAGTTCATGGCGTCGCCGTCGGTCGCCGCCGGCGCCGAGGTGAACGTGCCGGAGACGTGCAACCTGTCCAAGGGCAAGTGGGTGTTCGACAACGCGACGTACCCGCTGTACCGC GAGCAGGAGTGCGAGTACCTGACGGCGCAGGTGACGTGCACGCGGAACGGGCGGCGCGACGACGGCTACCANAAGTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB640366             [                   ACACGCGCGCCGGCGCCATGGGCCTCCCCGGCCGGCGCAACCCGTTGCTGAGCGCGAGGCG CGCGGCGGCGTCCCTCCGGAGGAGCA GACGGCTGCCCGTCTATGTCGCCGCAGTCTTCTTCGTCGCCTCCGTCCTCCTCATGTTCCGCGACGAGATCCTTTATCTGACGACGGCAAGGTCGCCGTCGTCGTCGTTGCCGACAACGGGAGGATCAGCCGGCGGCGCC GGGCTCGCCCGGAAGGAGGAGCTAGTATCTGTCAACAAGCCAGTCTTGCTTGGTCACGGCGGCAAACCGGAGAAGCACCACAGCGTGACGGAGAGGCACCGGCCGAAGGTC AGCGCGAAGAGG CGGCCGAACAAGAAGGCGGCCAAGGCGGCGAGGAAGAAGTTCATGGCGTCGCCGTCGGTCGCCGCCGGCGCCGAGGTGAACGTGCCGGAGACGTGCAACCTGTCCAAAGGCAAGTGGGTGTTCCACAACGCGACGTACCCGCTGTACCGC GAGCATGACTGCGAGTACCTGACAGCGCATGTGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB640367             [                                 GCCATGGGCCTGCCCGGCCGGCGCAACCCGTTGCTGAGCGCGAGGCG CGCGGCGGCGTCCCTCCGGAGGAGCA GACGGCTGCCCGTCTATGTCGCCGCAGTCTTCTTCGTCGCCTCCGTCCTCCTCATGTTCCGCGACGAGATCCTTTATCTGACGACGGCAAGGTCGCCGTCGTCGTCGTTGCCGACAACGGGAGGATCAGCCGGCGGCGCC GGGCTCGCCCGGAAGGAGGAGCTAGTATCTGTCAACAAGCCAGTCTTGCTTGGTCACGGCGGCAAACCGGAGAAGCACCACAGCGTGACGGAGAGGCACCGGCCGAAGGTC AGCGCGAATAGG CGGCCGAACAAGAAGGCGGCCAAGGCGGCGAGGAAGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB634031             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGTCCAAGGGCAAGTGGGTGTTCGACAACGCGACGTACCCGCTGTACCGC GAGCAGGAGTGCGAGTACCTGACGGCGCAGGTGACGTGCACGCGGAACGGGCGGCGCGACGACGGCTACCAGAAGTGGCGGTGGCAGCCGAGGGACTGCGACCTCCCGCTCGCCTTCGACGCGAGGCTGTTCATGGAGCGGCTCCGCGGGAAGCGCCTCATGTTCGTCGGCGACTCGCTGAACCGCAACCAGTGGGAGTCCATGGTGTGCCTGGTGCGGCCGGCGCTGTCGCCGGGGAAGAGCTACGTGACGTGGTGGGACGGCCAGCGGGTCGTCCTCCACGCTTGGGAGTACAACGCGACGGTGGAGTTCTACTGGGCGCCGTTCCTCGTCGAGTCCAACTCCGACGACCCCAAGGCGCACAGCATCCGGGACCGCGTCATCAAGCCCGAGGCGATCGCCGCGCACGCCGGCGACTGGGTCGGCGTCGACTACCTCGTCTTCAACACGTACATCTGGTGGATGAACACGGTCAACATGAAAGTCGTGAGGCCGACGGGGAAGACGTGGGAGGAGTACGACGAGGTGGGTCGGATCGAGGCGTACAGGAGAGTGCTCGACACATGGGCGACCTGGGTGAACGACAACGTCGACCCGGCCCGCACGTCCGTGTTCTTCATGAGCGTCTCCCCTCTTCACATCAGCTCGGAGGCGTGGGGCAACCCGGGCGGGGTGCGGTGCGCGAATGAGGACGCGCCGGTGCAGAACTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AF521990             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAACGTCGTGCGACGGTGTGAGCGAGTACCGTGTAGATAGAAGGGCAGAATAGATATTCCAACACTCAGATTTACACAGCTTATTACTTCTGTAATACACCATGAAATTTGTTATTC TTTATCAATACTAGAAAAATGCCCGTGCATTGTAACGGATAA                                  ]




>consensus_12823#0
CACACACGCGTAAACGACGACACGCGCGCCGGCGCCATGGGCCTCCCCGGCCGGCGCAAC
CCGTTGCTGAGCGCGAGGCGCGCGGCGGCGTCCCTCCGGAGGAGCAGACGGCTGCCCGTC
TATGTCGCCGCAGTCTTCTTCGTCGCCTCCGTCCTCCTCATGTTCCGCGACGAGATCCTT
TATCTGACGACGGCAAGGTCGCCGTCGTCGTCGTTGCCGACAACGGGAGGATCAGCCGGC
GGCGCCGGGCTCGCCCGGAAGGAGGAGCTAGTATCTGTCAACAAGCCAGTCTTGCTTGGT
CACGGCGGCAAACCGGAGAAGCACCACAGCGTGACGGAGAGGCACCGGCCGAAGGTCAGC
GCGAAGAGGCGGCCGAACAAGAAGGCGGCCAAGGCGGCGAGGAAGAAGTTCATGGCGTCG
CCGTCGGTCGCCGCCGGCGCCGAGGTGAACGTGCCGGAGACGTGCAACCTGTCCAAGGGC
AAGTGGGTGTTCGACAACGCGACGTACCCGCTGTACCGCGAGCAGGAGTGCGAGTACCTG
ACGGCGCAGGTGACGTGCACGCGGAACGGGCGGCGCGACGACGGCTACCAGAAGTGGCGG
TGGCAGCCGAGGGACTGCGACCTCCCGCTCGCCTTCGACGCGAGGCTGTTCATGGAGCGG
CTCCGCGGGAAGCGCCTCATGTTCGTCGGCGACTCGCTGAACCGCAACCAGTGGGAGTCC
ATGGTGTGCCTGGTGCGGCCGGCGCTGTCGCCGGGGAAGAGCTACGTGACGTGGTGGGAC
GGCCAGCGGGTCGTCCTCCACGCTTGGGAGTACAACGCGACTGTGGAGTTCTACTGGGCG
CCGTTCCTCGTCGAGTCCAACTCCGACGACCCCAAGGCGCACAGCATCCGGGACCGCGTC
ATCAAGCCCGAGGCGATCGCCGCGCACGCCGGCGACTGGGTCGGCGTCGACTACCTCGTC
TTCAACACGTACATCTGGTGGATGAACACGGTCAACATGAAAGTCGTGAGGCCGACGGGG
AAGACGTGGGAGGAGTACGACGAGGTGGGTCGGATCGAGGCGTACAGGAGAGTGCTCGAC
ACATGGGCGACCTGGGTGAACGACAACGTCGACCCGGCCCGCACGTCCGTGTTCTTCATG
AGCGTCTCCCCTCTTCACATCAGCCCGGAGGCGTGGGGCAACCCGGGCGGGGTGCGGTGC
GCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGCCCGCTGTGGCTGGGCACGGACTGG
GACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCCGCGGGGCGCGTCCCGGTCACGTTC
GTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGACGGGCACACGTCGGTGCACACCATC
CGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCCGACCCGGCCACGTACGCGGACTGC
ATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGGAACCTCATGCTCTACGCCCGTATC
CTCTCCAGGCCGCCGGCGGCGGCCGGTCACGTGGCGTGACCGACCATATGTGTACAGATA
CTGTTTGTTTGTTTGTTCGTTCGTTGATGGGTTGCCAGCTGCCTGCACGGTTAGTTTTAG
TTTTTGCCTTTCGCTTTTGTTGCTTCTCGATTATTATTTTCTCATATGCGAGATATAAAG
GAGGTGGTTGGTGGCGATCGAGGTGATTGATGGTCATGTGACGCAACATTCTTGACCGGA
TTGTGTGGCACGAGTTAAGCGGGGAACATCTGCAGTAGTAGTAGTTACATGGTTGAAGGG
GCGTGCGCCGTGGCGCGACGCGAATAAATGTCGTGTGACGGTGTGAGCGAGTACCGTGTA
GATAGAAGGGCAGAATAGATATTCCAACACTCAGATTTACACAGCTTATTACTTCTGTAA
TACTCCATGAAATTTGTTATTCTTTTATCAATACTAGAAAAATGCCCGTGCATTGTAACG
GATAAATGCGTTGTTTTTTTTCCAGTGGTACGATCTATC

consensusID : consensus_12823#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 817
fasta sequence

                              [CAACCCGGGCGGGGTGCGGTGCGCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGCCCGCTGTGGCTGGGCACGGACTGGGACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCCGCGGGGCGCGTCCCGGTCACGTTCGTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGACGGGCACACGTCGGTGCACACCATCCGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCCGACCCGGCCACGTACGCGGACTGCATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGGAACCTCATGCTCTACGCCCGTATCCTCTCCAGGCCGCCGGCGGCGGCGGCGGCGGCGGCCGGTTACGTGGCGTGACCGACCATATGTGTACAGATACTGTTTGTTTTGTTTGTTCGTTCGTTGATGGGTTGCCAGCTGCCTGCACGGTTAGTTTTAGTTTTTGCCTTTCGCTTTTGTTGCTTCTCGATTATTATTTTCTCATATGCGAGATATAAAGGAGGTGGTTGGTGGCGATCGAGGTGATTGATGGTCATGTGACGCAACATTCTTGACCGGATTGTGTGGCACGAGTTAAGCGGGGAACATATGCAGTAGTAGTAGTTACATGGTTGAAGGGGCGTGCGCCGTGGCGCGACGCGAACAAACGTCGTGTGACGGTGTGAGCGAGTACCGTGTAGATAGAAGGGCAGAATAGATATTCCAACACTCAGATTTACACAGCTTATTACTTCTGTAATACGCCATGAAATTTGTTATTCTTTTATCAATACTAGAAAAAAGCGCCGTGCATTGTAACGG]

[-] EMBL CB634032             [CAACCCGGGCGGGGTGCGGTGCGCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGCCCGCTGTGGCTGGGCACGGACTGGGACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCCGCGGGGCGCGTCCCGGTCACGTTCGTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGACGGGCACACGTCGGTGCACACCATCCGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCCGACCCGGCCACGTACGCGGACTGCATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGGAACCTCATGCTCTACGCCCGTATCCTCTCCAGGCCGCCGGCGGCGGCGGCGGCGGCGGCCGGTTACGTGGCGTGACCGACCATATGTGTACAGATACTGTTTGTTTTGTTTGTTCGTTCGTTGATGGGTTGCCAGCTGCCTGCACGGTTAGTTTTAGTTTTTGCCTTTCGCTTTTGTTGCTTCTCGATTATTATTTTCTCATATGCGAGATATAAAGGAGGTGGTTGGTGGCGATCGAGGTGATTGATGGTCATGTGACGCAACATTCTTGACCGGATTGTGTGGCACGAGTTAAGCGGGGAACATATGCAGTAGTAGTAGTTACATGGTTGAAGGGGCGTGCGCCGTGGCGCGACGCGAACAAACGTCGTGTGACGGTGTGAGCGAGTACCGTGTAGATAGAAGGGCAGAATAGATATTCCAACACTCAGATTTACACAGCTTATTACTTCTGTAATACGCCATGAAATTTGTTATTCTTTTATCAATACTAGAAAAAAGCGCCGTGC          ]
[-] EMBL CB627251             [                   TGCGCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGCCCGCTGTGGCTGGGCACGGACTGGGACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCCGCGGGGCGCGTCCCGGTCACGTTCGTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGACGGGCACACGTCGGTGCACACCATCCGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCCGACCCGGCCACGTACGCGGACTGCATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGGAACCTCATGCTCTACGCCCGTATCCTCTCCAGGCCGCCGGCGGCGGCGGCGGCGGCGGCCGGTTACGTGGCGTGACCGACCATATGTGTACAGATACTGTTTGTTTTGTTTGTTCGTTCGTTGATGGGTTGCCAGCTGCCTGCACGGTTAGTTTTAGTTTTTGCCTTTCGCTTTTGTTGCTTCTCGATTATTATTTTCTCATATGCGAGATATAAAGGAGGTGGTTGGTGGCGATCGAGGTGATTGATGGTCATGTGACGCAACATTCTTGACCGGATTGTGTGGCACGAGTTAAGCGGGGAACATATGCAGTAGTAGTAGTTACATGGTTGAAGGGGCGTGCGCCGTGGCGCGACGCGAACAAACGTCGTGTGACGGTGTGAGCGAGTACCGTGTAGATAGAAGGGCAGAATAGATATTCCAACACTCAGATTTACACAGCTTATTACTTCTGTAATACACCATGAAATTTGTTATTCTTTTATGAATACTAGAAAAATGC CCGTGCATTGTAACGG]




>consensus_12823#1
CAACCCGGGCGGGGTGCGGTGCGCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGCCC
GCTGTGGCTGGGCACGGACTGGGACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCCGC
GGGGCGCGTCCCGGTCACGTTCGTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGACGG
GCACACGTCGGTGCACACCATCCGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCCGA
CCCGGCCACGTACGCGGACTGCATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGGAA
CCTCATGCTCTACGCCCGTATCCTCTCCAGGCCGCCGGCGGCGGCGGCGGCGGCGGCCGG
TTACGTGGCGTGACCGACCATATGTGTACAGATACTGTTTGTTTTGTTTGTTCGTTCGTT
GATGGGTTGCCAGCTGCCTGCACGGTTAGTTTTAGTTTTTGCCTTTCGCTTTTGTTGCTT
CTCGATTATTATTTTCTCATATGCGAGATATAAAGGAGGTGGTTGGTGGCGATCGAGGTG
ATTGATGGTCATGTGACGCAACATTCTTGACCGGATTGTGTGGCACGAGTTAAGCGGGGA
ACATATGCAGTAGTAGTAGTTACATGGTTGAAGGGGCGTGCGCCGTGGCGCGACGCGAAC
AAACGTCGTGTGACGGTGTGAGCGAGTACCGTGTAGATAGAAGGGCAGAATAGATATTCC
AACACTCAGATTTACACAGCTTATTACTTCTGTAATACGCCATGAAATTTGTTATTCTTT
TATCAATACTAGAAAAAAGCGCCGTGCATTGTAACGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12823#0      CACACACGCGTAAACGACGACACGCGCGCCGGCGCCATGGGCCTCCCCGGCCGGCGCAAC 60
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      CCGTTGCTGAGCGCGAGGCGCGCGGCGGCGTCCCTCCGGAGGAGCAGACGGCTGCCCGTC 120
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      TATGTCGCCGCAGTCTTCTTCGTCGCCTCCGTCCTCCTCATGTTCCGCGACGAGATCCTT 180
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      TATCTGACGACGGCAAGGTCGCCGTCGTCGTCGTTGCCGACAACGGGAGGATCAGCCGGC 240
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      GGCGCCGGGCTCGCCCGGAAGGAGGAGCTAGTATCTGTCAACAAGCCAGTCTTGCTTGGT 300
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      CACGGCGGCAAACCGGAGAAGCACCACAGCGTGACGGAGAGGCACCGGCCGAAGGTCAGC 360
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      GCGAAGAGGCGGCCGAACAAGAAGGCGGCCAAGGCGGCGAGGAAGAAGTTCATGGCGTCG 420
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      CCGTCGGTCGCCGCCGGCGCCGAGGTGAACGTGCCGGAGACGTGCAACCTGTCCAAGGGC 480
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      AAGTGGGTGTTCGACAACGCGACGTACCCGCTGTACCGCGAGCAGGAGTGCGAGTACCTG 540
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      ACGGCGCAGGTGACGTGCACGCGGAACGGGCGGCGCGACGACGGCTACCAGAAGTGGCGG 600
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      TGGCAGCCGAGGGACTGCGACCTCCCGCTCGCCTTCGACGCGAGGCTGTTCATGGAGCGG 660
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      CTCCGCGGGAAGCGCCTCATGTTCGTCGGCGACTCGCTGAACCGCAACCAGTGGGAGTCC 720
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      ATGGTGTGCCTGGTGCGGCCGGCGCTGTCGCCGGGGAAGAGCTACGTGACGTGGTGGGAC 780
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      GGCCAGCGGGTCGTCCTCCACGCTTGGGAGTACAACGCGACTGTGGAGTTCTACTGGGCG 840
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      CCGTTCCTCGTCGAGTCCAACTCCGACGACCCCAAGGCGCACAGCATCCGGGACCGCGTC 900
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      ATCAAGCCCGAGGCGATCGCCGCGCACGCCGGCGACTGGGTCGGCGTCGACTACCTCGTC 960
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      TTCAACACGTACATCTGGTGGATGAACACGGTCAACATGAAAGTCGTGAGGCCGACGGGG 1020
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      AAGACGTGGGAGGAGTACGACGAGGTGGGTCGGATCGAGGCGTACAGGAGAGTGCTCGAC 1080
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      ACATGGGCGACCTGGGTGAACGACAACGTCGACCCGGCCCGCACGTCCGTGTTCTTCATG 1140
consensus_12823#1      ------------------------------------------------------------
                                                                                   

consensus_12823#0      AGCGTCTCCCCTCTTCACATCAGCCCGGAGGCGTGGGGCAACCCGGGCGGGGTGCGGTGC 1200
consensus_12823#1      --------------------------------------CAACCCGGGCGGGGTGCGGTGC 22
                                                             **********************

consensus_12823#0      GCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGCCCGCTGTGGCTGGGCACGGACTGG 1260
consensus_12823#1      GCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGCCCGCTGTGGCTGGGCACGGACTGG 82
                       ************************************************************

consensus_12823#0      GACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCCGCGGGGCGCGTCCCGGTCACGTTC 1320
consensus_12823#1      GACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCCGCGGGGCGCGTCCCGGTCACGTTC 142
                       ************************************************************

consensus_12823#0      GTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGACGGGCACACGTCGGTGCACACCATC 1380
consensus_12823#1      GTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGACGGGCACACGTCGGTGCACACCATC 202
                       ************************************************************

consensus_12823#0      CGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCCGACCCGGCCACGTACGCGGACTGC 1440
consensus_12823#1      CGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCCGACCCGGCCACGTACGCGGACTGC 262
                       ************************************************************

consensus_12823#0      ATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGGAACCTCATGCTCTACGCCCGTATC 1500
consensus_12823#1      ATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGGAACCTCATGCTCTACGCCCGTATC 322
                       ************************************************************

consensus_12823#0      CTCTCCAGGCCGCCGGCGGCGGC------------CGGTCACGTGGCGTGACCGACCATA 1548
consensus_12823#1      CTCTCCAGGCCGCCGGCGGCGGCGGCGGCGGCGGCCGGTTACGTGGCGTGACCGACCATA 382
                       ***********************            **** ********************

consensus_12823#0      TGTGTACAGATACTGTTTGTTT-GTTTGTTCGTTCGTTGATGGGTTGCCAGCTGCCTGCA 1607
consensus_12823#1      TGTGTACAGATACTGTTTGTTTTGTTTGTTCGTTCGTTGATGGGTTGCCAGCTGCCTGCA 442
                       ********************** *************************************

consensus_12823#0      CGGTTAGTTTTAGTTTTTGCCTTTCGCTTTTGTTGCTTCTCGATTATTATTTTCTCATAT 1667
consensus_12823#1      CGGTTAGTTTTAGTTTTTGCCTTTCGCTTTTGTTGCTTCTCGATTATTATTTTCTCATAT 502
                       ************************************************************

consensus_12823#0      GCGAGATATAAAGGAGGTGGTTGGTGGCGATCGAGGTGATTGATGGTCATGTGACGCAAC 1727
consensus_12823#1      GCGAGATATAAAGGAGGTGGTTGGTGGCGATCGAGGTGATTGATGGTCATGTGACGCAAC 562
                       ************************************************************

consensus_12823#0      ATTCTTGACCGGATTGTGTGGCACGAGTTAAGCGGGGAACATCTGCAGTAGTAGTAGTTA 1787
consensus_12823#1      ATTCTTGACCGGATTGTGTGGCACGAGTTAAGCGGGGAACATATGCAGTAGTAGTAGTTA 622
                       ****************************************** *****************

consensus_12823#0      CATGGTTGAAGGGGCGTGCGCCGTGGCGCGACGCGAATAAATGTCGTGTGACGGTGTGAG 1847
consensus_12823#1      CATGGTTGAAGGGGCGTGCGCCGTGGCGCGACGCGAACAAACGTCGTGTGACGGTGTGAG 682
                       ************************************* *** ******************

consensus_12823#0      CGAGTACCGTGTAGATAGAAGGGCAGAATAGATATTCCAACACTCAGATTTACACAGCTT 1907
consensus_12823#1      CGAGTACCGTGTAGATAGAAGGGCAGAATAGATATTCCAACACTCAGATTTACACAGCTT 742
                       ************************************************************

consensus_12823#0      ATTACTTCTGTAATACTCCATGAAATTTGTTATTCTTTTATCAATACTAGAAAAATGC-C 1966
consensus_12823#1      ATTACTTCTGTAATACGCCATGAAATTTGTTATTCTTTTATCAATACTAGAAAAAAGCGC 802
                       **************** ************************************** ** *

consensus_12823#0      CGTGCATTGTAACGGATAAATGCGTTGTTTTTTTTCCAGTGGTACGATCTATC 2019
consensus_12823#1      CGTGCATTGTAACGG-------------------------------------- 817
                       ***************