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Oryza sativa
cluster # 12848 cluster # 12848       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12848#0 length = 1697 sequences # 10  
consensus_12848#1 length = 274 sequences # 1  

consensusID : consensus_12848#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1697
fasta sequence
                              [TCGCCGCCGCCACTTCCCCCTCCCTGACGCTTCGCCGCAGCGAAAGGCGGAGAGAGCGGCGCGCGCGCGG--GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCGAGAGGAGCAAGC-GAGAATGTCGCCGATGCTGGCGACGCTGCCGGACGTCACGGCCGTCCTCCACTCCCCGTCGGCCTCGCCGCCGTCCGGCCTCCGCGCGCCGGCGGCTGTGGGGATGGGGATGGCGAGGACGCGCTTTCTCGCTCCGCGGGCGGCGGCTTCGGCGGCCTCCGCCGTCTCCGCGAAGCCGGCGGCGGTGGCGCCGCTGTACGCGGACCGCACGGTCGTCCGTATCGGGCTCCCCAGCAAGGGCCGCATGTCCGAGCAAACCCTAAGCCTCCTTAAGAGTTGCCAATTGTCAGTCAGGCACCTCAACCCGCGGCAGTACACCGCAGATATCCCGCAGGTCCCAAACTTGGAGGTTTGGTTTCAGAGGCCCAAAGATATTGTCCGCAAACTACAATCTGGGGATCTTGACCTTGGCATTGTTGGTTTTGACATAGTCAGTGAATATGGGCAGGGTAGTGATGATTTAGTAGTTGTTCATGATGCTCTCGAGTTTGGACATTGTCGTTTGTCCCTTGCGGTTCCTAAGGAAGGCATTTTCGAGAATATAAATACTCTGGAGGATTTGGCAAATATGCCTGAATGGACACAAGAGAGACCATTGCGTGTTGTTACAGGATTTGGATATCTAGGAGAAAAGTTTATGAGAGAAAATGGTTTCAATCATGTTTCGTTTTTAGCTGGAGATGGAGCTCTTGAATCATATCCCGCTATGGGTATGGCTGATGTTATCGTGGATCTTGTGAGTAGTGGAACAACCTTACGTGAGAATAATTTGAAGGAAATTGATGGTGGAGTAGTTTTGGAAAGCCAGGCCACGCTTGTCGCATGTAGGAGATCGCTACACAAACGTAATGGTGTCTTGGAGATTACGCATGAGATGCTTGAAAGATTAGAGGCTCACCTCACAGCAACTGGGGAGATAATGGTCACAGCAAACATGAGGGGGAACAGTGCGGAAGAAGTGGCGGAAAGAGTTCTCAGCCAAACATCGTTATGTGGATTACAGGGCCCAACCATAAGTCCAGTCTACCGCTCACGTGATGGGAAGGTTGCTGTGGAATATTATGCGATTAATGTAGTAGTTCCACAGAAGTCTCTTTACAAGTCCATTCAACAGCTGAGATCTATTGGTGGCAGTGGAGTCTTGGTGACAAAGCTGACCTACATA-TTTGATGAGGAAACTCCTAGATGGCGCAAACTACTTTCGGAGCTGGGGTTGTGACTTGGTGTGAAGTCTGCCATACTTCTCTGTCAATGACCCTTTTAGCATCGGTTTACTTATGCTCGCTGAAGTATACTACAACCATAATCAGAAATGAGCTCTCGTTTGAAGTGTCTGCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCATCGTACATTGTGCTCGTCTAGTTA-TACCTTTGACAAGCATATGGGTTGAAATACCCTTTATGTACCTGTTGATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATGAATTGTACCTTTTCTTGC-GTGACGCTGAATAAATTGGGCTTTCTGCAATAAAGATGGATGGTGTAATTCCACCCCGTAAAAAAAAAAAAA]

[+] EMBL AK102053             [TCGCCGCCGCCACTTCCCCCTCCCTGACGCTTCGCCGCAGCGAAAGGCGGAGAGAGCGGCGCGCGCGCGG  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCGAGAGGAGCAAGC GAGAATGTCGCCGATGATGGCGACGCTGCAGGACGTCACGGCCGTCCTCCACTCCCCGTCGGCCTCGCCGCCGTCCGGCCTCCGCGCGCCGGCGGCTGTGGGGATGGGGATGGCGAGGACGCGCTTTCTCGCTCCGCGGGCGGCGGCTTCGGCGGCCTCCGCCGTCTCCGCGAAGCCGGCGGCGGTGGCGCCGCTGTACGCGGACCGCACGGTCGTCCGTATCGGGCTCCCCAGCAAGGGCCGCATGTCCGAGCAAACCCTAAGCCTCCTTAAGAGTTGCCAATTGTCAGTCAGGCACCTCAACCCGCGGCAATACACCGCAGATATCCCGCAGGTCCCAAACTTGGAGGTTTGGTTTCAGAGGCCCAAAGATATTGTCCGCAAACTACAATCTGGGGATCTTGACCTTGGCATTGTTGGTTTTGACATAGTCAGTGAATATGGGCAGGGTAGTGATGATTTAGTAGTTGTTCATGATGCTCTCGAGTTTGGACATTGTCGTTTGTCCCTTGCGGTTCCTAAGGAAGGCATTTTCGAGAATATAAATACTCTGGAGGATTTGGCAAATATGCCTGAATGGACACAAGAGAGACCATTGCGTGTTGTTACAGGATTTGGATATCTAGGAGAAAAGTTTATGAGAGAAAATGGTTTCAATCATGTTTCGTTTTTAGCTGGAGATGGAGCTCTTGAATCATATCCCGCTATGGGTATGGCTGATGTTATCGTGGATCTTGTGAGTAGTGGAACAACCTTACGTGAGAATAATTTGAAGGAAATTGATGGTGGAGTAGTTTTGGAAAGCCAGGCCACGCTTGTCGCATGTAGGAGATCGCTACACAAACGTAATGGTGTCTTGGAGATTACGCATGAGATGCTTGAAAGATTAGAGGCTCACCTCACAGCAACTGGGGAGATAATGGTCACAGCAAACATGAGGGGGAACAGTGCGGAAGAAGTGGCGGAAAGAGTTCTCAGCCAAACATCGTTATGTGGATTACAGGGCCCAACCATAAGTCCAGTCTACCGCTCACGTGATGGGAAGGTTGCTGTGGAATATTATGCGATTAATGTAGTAGTTCCACAGAAGTCTCTTTACAAGTCCATTCAACAGCTGAGATCTATTGGTGGCAGTGGAGTCTTGGTGACAAAGCTGACCTACATA TTTGATGAGGAAACTCCTAGATGGCGCAAACTACTTTCGGAGCTGGGGTTGTGACTTGGTGTGAAGTCTGCCATACTTCTCTGTCAATGACCCTTTTAGCATCGGTTTACTTATGCTCGCTGAAGTATACTACAACCATAATCAGAAATGAGCTCTCGTTTGAAGTGTCTGCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCATCGTACATTGTGCTCGTCTAGTTA TACCTTTGACAAGCATATGGGTTGAAATACCCTTTATGTACCTGTTGATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATGAATTGTACCTTTTCTTGC GTGACGCTGAATAAATTGGGCTTTCTGCAATAAAGATGGATGGTGTAATTCC                    ]
[+] EMBL CB660717             [                  CCTCCCTGACGCTTCGCCGCAGCGAAAGGCGGAGAGAGCGGCGCGCGCGCGG  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCGAGAGGAGCAAGC GAGAATGTCGCCGATGCTGGCGACGCTGCCGGACGTCACGGCCGTCCTCCACTCCCCGTCGGCCTCGCCGCCGTCCGGCCTCCGCGCGCCGGCGGCTGTGGGGATGGGGATGGCGAGGACGCGCTTTCTCGCTCCGCGGGCGGCGGCTTCGGCGGCCTCCGCCGTCTCCGCGAAGCCGGCGGCGGTGGCGCCGCTGTACGCGGACCGCACGGTCGTCCGTATCGGGCTCCCCAGCAAGGGCCGCATGTCCGAGCAAACCCTAAGCCTCCTTAAGAGTTGCCAATTGTCAGTCAGGCACCTCAACCCGCGGCAGTACACCGCAGATATCCCGCAGGTCCCAAACTTGGAGGTTTGGTTTCAGAGGCCCAAAGATATTGTCCGCAAACTACAATCTGGGGATCTTGACCTTGGCATTGTTGGTTTTGACATAGTCAGTGAATATGGGCAGGGTAGTGATGATTTAGTAGTTGTTCATGATGCTCTCGAGTTTGGACATTGTCGTTTGTCCCTTGCGGTTCCTAAGGAAGGCATTTTCGAGAATATAAATACTCTGGAGGATTTGGCAAATATGCCTGAATGGACACAAGAGAGACCATTGCGTGTTGTTACAGGATTTGGATATCTAGGAGAAAAGTTTATGAGAGAAAATGGTTTCAATCATGTTTCGTTTTTAGCTGGAGATGGAGCTCTTGAATCATATCCCGCTATGGGTATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB635947             [                  CCTCCCTGACGCTTCGCCGCAGCGAAAGGCGGAGAGAGCGGCGCGCGCGCGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCGAGAGGAGCGAGC GAGAATGTCGCCGATGCTGGCGACGCTGCCGGACGTCACGGCCGTCCTCCTCTCCCCGTCGGCCTCGCCGCCGTCCGGCCTCCGCGCGCCGGCGGCTGTGGGGATGGGGATGGCGAGGACGCGCTTTCTCGCTCCGCGGGCGGCGGCTTCGGCGGCCTCCGCCGTCTCCGCGAAGCCGGCGGCGGTGGCGCCGCTGTACGCGGACCGCACGGTCGTCCGTATCGGGCTCCCCAGCTAGGGCCGCATGTCCGAGCAAACCCTAAGCCTCCTTATGAGTTGCCAATTGTCAGTCAGGCACCTCAACCCGCGGCAGTACACCGCAGATATCCCGCAGGTCCCAAACTTGGAGGTTTGGTTTCAGAGGCCCATAGATATTGTCCGCAAACTACCATCTGGGGATCTTGACCTTGGCATTGTTGGTTTTGACATAGTCAGTGAATATGGGCAGGGTAGTGATGATTTACTACTTGTTCATGATGCTCTCGAGTTTGGACATTGTCGTTTGTCCCTTGCGGTTCCTAATGAAGGCATTTTCGAGAATATACATACTCTGGAGGATTTGGCGAATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU174038             [                                                                                                          CGAGAGGAGCAAGCTGAGAATGTCGCCGATGCTGGCGACGCTGCCGGACGTCACGGCCGTCCTCCACTCCCCGTCGGCCTCGCCGCCGTCCGGCCTCCGCGCGCCGGCGGCTGTGGGGATGGGGATGGCGAGGACGCGCTTTCTCGCTCCGCGGGCGGCGGCTTCGGCGGCCTCCGCCGTCTCCGCGAAGCCGGCGGCGGTGGCGCCGCTGTACGCGGACCGCACGGTCGTCCGTATCGGGCTCCCCAGCAAGGGCCGCATGTCCGAGCAAACCCTAAGCCTCCTTAAGAGTTGCCAATTGTCAGTCAGGCACCTCAACCCGCGGCAGTACACCGCAGATATCCCGCAGGTCCCAAACTTGGAGGTTTGGTTTCAGAGGCCCAAAGATATTGTCCGCAAACTACAATCTGGGGATCTTGACCTTGGCATTGTTGGTTTTGACATAGTCAGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB660718             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAACCTTACGTGAGAATAATTTGAAGGAAATTGATGGTGGAGTAGTTTTGGAAAGCCAGGCCACGCTTGTCGCATGTAGGAGATCGCTACACAAACGTAATGGTGTCTTGGAGATTACGCATGAGATGCTTGAAAGATTAGAGGCTCACCTCACAGCAACTGGGGAGATAATGGTCACAGCAAACATGAGGGGGAACAGTGCGGAAGAAGTGGCGGAAAGAGTTCTCAGCCAAACATCGTTATGTGGATTACAGGGCCCAACCATAAGTCCAGTTTACCGCTCACGTGATGGGAAGGTTGCTGTGGAATATTATGCGATTAATGTAGTAGTTCCACAGAAGTCTCTTTACAAGTCCATTCAACAGCTGAGATTTATTGGTGGCAGTGGAGTCTTGGTGACAAAGCTGACCTACATA TTTGATGAGGAAACTCCTAGATGGCGCAAACTACTTTCGGAGCTGGGGTTGTGACTTGGTGTGAAGTCTGCCATACTTTTCTGTCAATGACCCTTTTAGCATCGGTTTACTTATGCTCGCTGAAGTATACTACAACCATAATCAGAAATGAGCTCTCGTTTGAAGTGTTTGCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCATCGTACATTGTGCTCGTCTAGTTA TACCTTTGACAAGCATATGGGTTGAAATACCCTTTATGTACCTGTTGATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATGAATTGTAC                                                                                   ]
[+] EMBL CA999207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAATGGTCACAGCAAACATGAGGGGGAACAGTGCGGAAGAAGTGGCGGAAAGAGTTCTCAGCCAAACATCGTTATGTGGATTACAGGGCCCAACCATAAGTCCAGTCTACCGCTCACGTGATGGGAAGGTTGCTGTGGAATATTATGCGATTAATGTAGTAGTTCCACAGAAGTCTCTTTACAAGTCCATTCAACAGCTGAGATCTATTGGTGGCAGTGGAGTCTTGGTGACAAAGCTGACCTACATA TTTGATGAGGAAACTCCTAGATGGCGCAAACTACTTTCGGAGCTGGGGTTGTGACTTGGTGTGAAGTCTGCCATACTTCTCTGTCAATGACCCTTTTAGCATCGGTTTACTTATGCTCGCTGAAGTATACTACAACCATAATCAGAAATGAGCTCTCGTT                                                                                                                                                                                                                                                                ]
[+] EMBL BQ906355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACCATAAGTCCAGTCTACCGCTCACGTGATGGGAAGGTTGCTGTGGAATATTATGCGATTAATGTAGTAGTTCCACAGAAGTCTCTTTACAAGTCCATTCAACAGCTGAGATCTATTGGTGGCAGTGGAGTCTTGGTGACAAAGCTGACCTACATACTTTGATGAGGAAACTCCTAGATGGCNCAAACTACTTTCGGAGCTGGGGTTGTGACTTGGTGTGAAGTCTGCCATACTTCTCTGTCAATGACCCTTTTAGCATCGGTTTACTTATGCTCGCTGAAGTATACTACAACCATAATCAGAAATGAGCTCTCGTTTGAAGTGTCTGCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCATCGTACATTGTGCTCGTCTAGTTACTACCTTTGACAAGCATATGGGTTGAAATACCCTTTATGTACCTGTTGATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATGAATTGTACCTTTTCTTGC GTGACGCTGAATAAATTGGGCTTTCTGCAATAAAGATGGATGGTGTAATTCCACCCCGTAAAAA        ]
[+] EMBL AU174039             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGACAAAGCTGACCTACATA TTTGATGAGGAAACTCCTAGATGGCGCAAACTACTTTCGGAGCTGGGGTTGTGACTTGGTGTGAAGTCTGCCATACTTCTCTGTCAATGACCCTTTTAGCATCGGTTTACTTATGCTCGCTGAAGTATACTACAACCATAATCAGAAATGAGCTCTCGTTTGAAGTGTNTGCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCATCGTACATTGTGCTCGTCTAGTTA TACCTTTGACAAGCATATGGGTTGAAATACCCTTTATGTACCTGTTGATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATGAATTGTACCTTTTCTTGCAGTGACGCTGAATAAATTGGGCTTTNTGCAATAAAGATGGATGGTGTAATTCCACCCCGTAAAAAAAAAAAAA]
[+] EMBL CB684278             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGTT AGCCTTGGAGTGAAGTCTGCCATACTTCTCTGTCAATGACCCTTTTAGCATCGGTTTACTTATGCTCGCTGAAGTATACTACAACCATAATCAGAAATGAGCTCTCGTTTGAAGTGTCTGCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCATCGTACATTGTGCTCGTCTAGTTA TACCTTTGACAAGCATATGGGTTGAAATACCCTTTATGTACCTGTTGATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATGAATTGTACCTTTTCTTGC GTGACGCTGAATAAATTGGGCTTTCTGCAATAAAGATGGATGGTGTAAT                       ]
[+] EMBL AA751405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCTCGTTTGAAGTGTCTGCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCATCGTACATTGTGCTCGTCTAGTTA TACCTTTGACAAGCATATGGGTTGAAATACCCTTTATGTACCTGTTGATATAATTG                                                                                                                                ]


>consensus_12848#0 TCGCCGCCGCCACTTCCCCCTCCCTGACGCTTCGCCGCAGCGAAAGGCGGAGAGAGCGGC GCGCGCGCGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCGAGAGGAGCAAGCGA GAATGTCGCCGATGCTGGCGACGCTGCCGGACGTCACGGCCGTCCTCCACTCCCCGTCGG CCTCGCCGCCGTCCGGCCTCCGCGCGCCGGCGGCTGTGGGGATGGGGATGGCGAGGACGC GCTTTCTCGCTCCGCGGGCGGCGGCTTCGGCGGCCTCCGCCGTCTCCGCGAAGCCGGCGG CGGTGGCGCCGCTGTACGCGGACCGCACGGTCGTCCGTATCGGGCTCCCCAGCAAGGGCC GCATGTCCGAGCAAACCCTAAGCCTCCTTAAGAGTTGCCAATTGTCAGTCAGGCACCTCA ACCCGCGGCAGTACACCGCAGATATCCCGCAGGTCCCAAACTTGGAGGTTTGGTTTCAGA GGCCCAAAGATATTGTCCGCAAACTACAATCTGGGGATCTTGACCTTGGCATTGTTGGTT TTGACATAGTCAGTGAATATGGGCAGGGTAGTGATGATTTAGTAGTTGTTCATGATGCTC TCGAGTTTGGACATTGTCGTTTGTCCCTTGCGGTTCCTAAGGAAGGCATTTTCGAGAATA TAAATACTCTGGAGGATTTGGCAAATATGCCTGAATGGACACAAGAGAGACCATTGCGTG TTGTTACAGGATTTGGATATCTAGGAGAAAAGTTTATGAGAGAAAATGGTTTCAATCATG TTTCGTTTTTAGCTGGAGATGGAGCTCTTGAATCATATCCCGCTATGGGTATGGCTGATG TTATCGTGGATCTTGTGAGTAGTGGAACAACCTTACGTGAGAATAATTTGAAGGAAATTG ATGGTGGAGTAGTTTTGGAAAGCCAGGCCACGCTTGTCGCATGTAGGAGATCGCTACACA AACGTAATGGTGTCTTGGAGATTACGCATGAGATGCTTGAAAGATTAGAGGCTCACCTCA CAGCAACTGGGGAGATAATGGTCACAGCAAACATGAGGGGGAACAGTGCGGAAGAAGTGG CGGAAAGAGTTCTCAGCCAAACATCGTTATGTGGATTACAGGGCCCAACCATAAGTCCAG TCTACCGCTCACGTGATGGGAAGGTTGCTGTGGAATATTATGCGATTAATGTAGTAGTTC CACAGAAGTCTCTTTACAAGTCCATTCAACAGCTGAGATCTATTGGTGGCAGTGGAGTCT TGGTGACAAAGCTGACCTACATATTTGATGAGGAAACTCCTAGATGGCGCAAACTACTTT CGGAGCTGGGGTTGTGACTTGGTGTGAAGTCTGCCATACTTCTCTGTCAATGACCCTTTT AGCATCGGTTTACTTATGCTCGCTGAAGTATACTACAACCATAATCAGAAATGAGCTCTC GTTTGAAGTGTCTGCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCATCGTACATTG TGCTCGTCTAGTTATACCTTTGACAAGCATATGGGTTGAAATACCCTTTATGTACCTGTT GATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATGAATTGTACCTTTT CTTGCGTGACGCTGAATAAATTGGGCTTTCTGCAATAAAGATGGATGGTGTAATTCCACC CCGTAAAAAAAAAAAAA



consensusID : consensus_12848#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 274
fasta sequence
                              [CACAGCTCAGTTTGAAGTGTCTNCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCAATCGTACAATTGTGCTCAGTGCTAGTTATNACCTTNTGGACACAGCATATGGGTTGAAATACCCTTGTATGTGACCTGTTTGATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATGGAATTGTACCTTTTCTTGCGTGGACGCTGAATAAATTTGGGCTTTCTGCAAATAAAGATGGATGGTGGTAATTCCACCCCCGTAGCA]

[+] EMBL BQ908756             [CACAGCTCAGTTTGAAGTGTCTNCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCAATCGTACAATTGTGCTCAGTGCTAGTTATNACCTTNTGGACACAGCATATGGGTTGAAATACCCTTGTATGTGACCTGTTTGATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATGGAATTGTACCTTTTCTTGCGTGGACGCTGAATAAATTTGGGCTTTCTGCAAATAAAGATGGATGGTGGTAATTCCACCCCCGTAGCA]


>consensus_12848#1 CACAGCTCAGTTTGAAGTGTCTNCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCAA TCGTACAATTGTGCTCAGTGCTAGTTATNACCTTNTGGACACAGCATATGGGTTGAAATA CCCTTGTATGTGACCTGTTTGATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGT GCGTATGGAATTGTACCTTTTCTTGCGTGGACGCTGAATAAATTTGGGCTTTCTGCAAAT AAAGATGGATGGTGGTAATTCCACCCCCGTAGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12848#0      TCGCCGCCGCCACTTCCCCCTCCCTGACGCTTCGCCGCAGCGAAAGGCGGAGAGAGCGGC 60
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      GCGCGCGCGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCGAGAGGAGCAAGCGA 120
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      GAATGTCGCCGATGCTGGCGACGCTGCCGGACGTCACGGCCGTCCTCCACTCCCCGTCGG 180
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      CCTCGCCGCCGTCCGGCCTCCGCGCGCCGGCGGCTGTGGGGATGGGGATGGCGAGGACGC 240
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      GCTTTCTCGCTCCGCGGGCGGCGGCTTCGGCGGCCTCCGCCGTCTCCGCGAAGCCGGCGG 300
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      CGGTGGCGCCGCTGTACGCGGACCGCACGGTCGTCCGTATCGGGCTCCCCAGCAAGGGCC 360
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      GCATGTCCGAGCAAACCCTAAGCCTCCTTAAGAGTTGCCAATTGTCAGTCAGGCACCTCA 420
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      ACCCGCGGCAGTACACCGCAGATATCCCGCAGGTCCCAAACTTGGAGGTTTGGTTTCAGA 480
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      GGCCCAAAGATATTGTCCGCAAACTACAATCTGGGGATCTTGACCTTGGCATTGTTGGTT 540
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      TTGACATAGTCAGTGAATATGGGCAGGGTAGTGATGATTTAGTAGTTGTTCATGATGCTC 600
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      TCGAGTTTGGACATTGTCGTTTGTCCCTTGCGGTTCCTAAGGAAGGCATTTTCGAGAATA 660
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      TAAATACTCTGGAGGATTTGGCAAATATGCCTGAATGGACACAAGAGAGACCATTGCGTG 720
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      TTGTTACAGGATTTGGATATCTAGGAGAAAAGTTTATGAGAGAAAATGGTTTCAATCATG 780
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      TTTCGTTTTTAGCTGGAGATGGAGCTCTTGAATCATATCCCGCTATGGGTATGGCTGATG 840
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      TTATCGTGGATCTTGTGAGTAGTGGAACAACCTTACGTGAGAATAATTTGAAGGAAATTG 900
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      ATGGTGGAGTAGTTTTGGAAAGCCAGGCCACGCTTGTCGCATGTAGGAGATCGCTACACA 960
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      AACGTAATGGTGTCTTGGAGATTACGCATGAGATGCTTGAAAGATTAGAGGCTCACCTCA 1020
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      CAGCAACTGGGGAGATAATGGTCACAGCAAACATGAGGGGGAACAGTGCGGAAGAAGTGG 1080
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      CGGAAAGAGTTCTCAGCCAAACATCGTTATGTGGATTACAGGGCCCAACCATAAGTCCAG 1140
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      TCTACCGCTCACGTGATGGGAAGGTTGCTGTGGAATATTATGCGATTAATGTAGTAGTTC 1200
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      CACAGAAGTCTCTTTACAAGTCCATTCAACAGCTGAGATCTATTGGTGGCAGTGGAGTCT 1260
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      TGGTGACAAAGCTGACCTACATATTTGATGAGGAAACTCCTAGATGGCGCAAACTACTTT 1320
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      CGGAGCTGGGGTTGTGACTTGGTGTGAAGTCTGCCATACTTCTCTGTCAATGACCCTTTT 1380
consensus_12848#1      ------------------------------------------------------------
                                                                                   

consensus_12848#0      AGCATCGGTTTACTTATGCTCGCTGAAGTATACTACAACCATAATCAGAAATGAGCTCTC 1440
consensus_12848#1      --------------------------------------------------CACAGCTCA- 9
                                                                            *****  

consensus_12848#0      GTTTGAAGTGTCTGCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCA-TCGTACA-T 1498
consensus_12848#1      GTTTGAAGTGTCTNCGGTGCTTATTTGAGAGGAAATTTTGGTCTGTGCCAATCGTACAAT 69
                       ************* ************************************ ******* *

consensus_12848#0      TGTGCTCGT--CTAGTTATACCTTTG---ACA-AGCATATGGGTTGAAATACCCTT-TAT 1551
consensus_12848#1      TGTGCTCAGTGCTAGTTATNACCTTNTGGACACAGCATATGGGTTGAAATACCCTTGTAT 129
                       *******    ********  * **    *** *********************** ***

consensus_12848#0      GT-ACCTGTT-GATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATG-A 1608
consensus_12848#1      GTGACCTGTTTGATATAATTGTGAGACCTTATTGCCTTGTTGGATAGGTGTGCGTATGGA 189
                       ** ******* *********************************************** *

consensus_12848#0      ATTGTACCTTTTCTTGCGTG-ACGCTGAATAAATT-GGGCTTTCTGCAA-TAAAGATGGA 1665
consensus_12848#1      ATTGTACCTTTTCTTGCGTGGACGCTGAATAAATTTGGGCTTTCTGCAAATAAAGATGGA 249
                       ******************** ************** ************* **********

consensus_12848#0      TGGTG-TAATTCCACCCC-GTAAAAAAAAAAAAA 1697
consensus_12848#1      TGGTGGTAATTCCACCCCCGTAGCA--------- 274
                       ***** ************ ***  *         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)