cluster # 12862

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Oryza sativa
cluster # 12862 cluster # 12862 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12862#0 length = 1788 sequences # 8

consensus_12862#1 length = 824 sequences # 3

consensusID : consensus_12862#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1788
fasta sequence

                              [TCGGCTCGTCGCCAACACGAAGCGAAAACGAGAAGAAGAAAAAATCCCTCTCCTCGTCGTAC-GGTCGTCGCGCGTAGTAAGCTC-AAGC-TCAGTAGGGGAATCGAGGATGTCGTCGTCGTCGTCGACGTCCCCGCGGTTCGGCTCGATGATAAGCGCGAAGCTGGCGTCGCCGCCGCCGTCGCTGCTCCTCCCGCCGTCGCCTCGCCTACAGGGCCGCCGCCTGACGCCGCCCTCGTGCACGCCCGGCACCCCCGCCGCGCTGCCGAGCCCGGGGCCGGACAAGGAGCCGGAGCGGGAGGCGGCGGGGTCGGGGTCCGGGTCGGCCACCACCCCGCGCTCCCCCGCGCAGCTCGGGAGCTCGCAGCTGCACCGGTGGTCGCGGGCCCGCGCGCACCGGTCCGGGCGGCGGCTGGAGTGGCCGACGATACGGGACCGCGGCAGCGGCGGGGCCTCGTCGCCGCCGACCCCGACCAGGCCGCACCCGTCGTCCGACGAGGCGGCGTCCGCGGCGGCGAAGGTCGCGGTGGAGGAGGAGGATGGCTACGGGGTGGTTGGGAGGGACGAGGCGGCGAAGTCGATCTACATGGTGTCCGACGGGACGGGGTGGACGGCGGAGCACTCCGTCAACGCCGCGCTCGGCCAGTTCGAGCACTGCCTCGTCGACCGCGGCTGCGCCGTCAACACACACCTCTTCAACGGGATTGATGACATGGATAGACTTATTGAGATAGTAAAGCAAGCAGCAAAAGAAGGAGCACTGGTTTTATATACTCTTGCTGATCCTTCAATGGCTGAGGCAACTAAGAAGGCCTGTGAGCTTTGGGGTGTTCCATCCAATGATATTCTTCGTCCTACTATTGAAGCCATAGCTTCCCATATTGGTGTTGCTCCATCTGGAATTCCACGAAGTTCTCCTAGCCGGAAGGGTCAACTTACTGAGGATTACTTCCGACGAATTGAAGCTATTGATTTTACCATCAAACAAGATGACGGTGCTCAGCCACAGAACCTTAACCGTGCACACATTGTACTTGTTGGTGTTTCACGTACTGGAAAGACACCATTGTCAATATATCTGGCTCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGTCCCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTCTTCAAGCAATCAGGAAGGCAAGGGCCAAAACTCTAGGATTTCATGGGCAAAAAAGCAATTATGCTGAAATGGAACATGTCAGGGGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATCCTATATGGCCAGTCATCGAAGTCACTGGAAAAGCTATAGAGGAAACAGCTGCTGTCGTTGTGAGGATATTCCATGATAGGAAACAGAAGTGCGCCATGCCACGCATATCAAAACGGGTGGCTCCAATTAGAATCTACGATTATCTGTCAGAGATGGTTAACACTCACGTTGAGTATCAAAAGATTTTTGCTAGGGACTTTTAAGTCTATTCTGCAGCTGTGAAGTGAATCCAAAAGTCTAAAAAACTACCCACTATCCGGCATTTTTCACGTGTCCCATATTAGGTTAGCATCACCTGTGCATAGAGAGGGTTTTAATTCATTTTGTAGATCATCACCACCTTGTGAGCTGTGTGTCATATTCTTTGTTCGTTCGTTTAACTCTTTGTTGAAGTCATGTACTACCACTCTTACGGAAATGACATATGAGTAAAAGACAATTCTTTCAAAAAAAAACAAACAAAAGGGAA]

[+] EMBL AK120747             [TCGGCTCGTCGCCAACACGAAGCGAAAACGAGAAGAAGAAAAAATCCCTCTCCTCGTCGTAC GGTCGTCGCGCGTAGTAAGCTC AAGC TCAGTAGGGGAATCGAGGATGTCGTCGTCGTCGTCGACGTCCCCGCGGTTCGGCTCGATGATAAGCGCGAAGCTGGCGTCGCCGCCGCCGTCGCTGCTCCTCCCGCCGTCGCCTCGCCTACAGGGCCGCCGCCTGACGCCGCCCTCGTGCACGCCCGGCACCCCCGCCGCGCTGCCGAGCCCGGGGCCGGACAAGGAGCCGGAGCGGGAGGCGGCGGGGTCGGGGTCCGGGTCGGCCACCACCCCGCGCTCCCCCGCGCAGCTCGGGAGCTCGCAGCTGCACCGGTGGTCGCGGGCCCGCGCGCACCGGTCCGGGCGGCGGCTGGAGTGGCCGACGATACGGGACCGCGGCAGCGGCGGGGCCTCGTCGCCGCCGACCCCGACCAGGCCGCACCCGTCGTCCGACGAGGCGGCGTCCGCGGCGGCGAAGGTCGCGGTGGAGGAGGAGGATGGCTACGGGGTGGTTGGGAGGGACGAGGCGGCGAAGTCGATCTACATGGTGTCCGACGGGACGGGGTGGACGGCGGAGCACTCCGTCAACGCCGCGCTCGGCCAGTTCGAGCACTGCCTCGTCGACCGCGGCTGCGCCGTCAACACACACCTCTTCAACGGGATTGATGACATGGATAGACTTATTGAGATAGTAAAGCAAGCAGCAAAAGAAGGAGCACTGGTTTTATATACTCTTGCTGATCCTTCAATGGCTGAGGCAACTAAGAAGGCCTGTGAGCTTTGGGGTGTTCCATCCAATGATATTCTTCGTCCTACTATTGAAGCCATAGCTTCCCATATTGGTGTTGCTCCATCTGGAATTCCACGAAGTTCTCCTAGCCGGAAGGGTCAACTTACTGAGGATTACTTCCGACGAATTGAAGCTATTGATTTTACCATCAAACAAGATGACGGTGCTCAGCCACAGAACCTTAACCGTGCACACATTGTACTTGTTGGTGTTTCACGTACTGGAAAGACACCATTGTCAATATATCTGGCTCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGTCCCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTCTTCAAGCAATCAGGAAGGCAAGGGCCAAAACTCTAGGATTTCATGGGCAAAAAAGCAATTATGCTGAAATGGAACATGTCAGGGGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATCCTATATGGCCAGTCATCGAAGTCACTGGAAAAGCTATAGAGGAAACAGCTGCTGTCGTTGTGAGGATATTCCATGATAGGAAACAGAAGTGCGCCATGCCACGCATATCAAAACGGGTGGCTCCAATTAGAATCTACGATTATCTGTCAGAGATGGTTAACACTCACGTTGAGTATCAAAAGATTTTTGCTAGGGACTTTTAAGTCTATTCTGCAGCTGTGAAGTGAATCCAAAAGTCTAAAAAACTACCCACTATCCGGCATTTTTCACGTGTCCCATATTAGGTTAGCATCACCTGTGCATAGAGAGGGTTTTAATTCATTTTGTAGATCATCACCACCTTGTGAGCTGTGTGTCATATTCTTTGTTCGTTCGTTTAACTCTTTGTTGAAGTCATGTACTACCACTCTTACGGAAATGACATATGAGTAAAAGA                                 ]
[+] EMBL CB647556             [             AACACAAACCGAAATTGAGAAGAAGAAAAGATCCCTCTCCTCCTATTACTGGTCGTGGCGCGGAGTAAGCTCTCAGCGTCAGTAGGGGAATCGAGGATGTCGTCGTCGTCGTCCACGTGCCGGCGGTTCGGCTCTATGATAAGCGCGAAGCTGGCGTCGCCGCCGCCGTCGCTGCTCCTCCCGCCGTCGCCTCGCCTACAGGGCCGCCGCCTGACGCCGCCCTCGTGCACGCCCGGCACCCCCGCCGCGCTGCCGAGCCCGGGGCCGGACAAGGAGCCGGAGCGGGAGGCGGCGGGGTCGGGGTCCGGGTCGGCCACCACCCCGCGCTCCCCCGCGCAGCTCGGGAGCTCGCAGCTGCACCGGTGGTCGCGGGCCCGCGCGCACCGGTCCGGGCGGCGGCTGGAGTGGCCGACGATACGGGACCGCGGCAGCGGCGGGGCCTCGTCGCCGCCGACCCCGACCAGGCCGCACCCGTCGTCCGACGAGGCGGCGTCCGCGGCGGCGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB649177             [             AACACGCCGCGAAAACGAGAAGAAGAAAAAATCCCTCTCCTCGTCGTAC GGTCGTCGCGCGTAGTAAGCTC AAGC TCAGTAGGGGAATCGAGGATGTCGTCGTCGTCGTCGACGTCCCCGCGGTTCGGCTCGATGATAAGCGCGAAGCTGGCGTCGCCGCCGCCGTCGCTGCTCCTCCCGCCGTCGCCTCGCCTACAGGGCCGCCGCCTGACGCCGCCCTCGTGCACGCCCGGCACCCCCGCCGCGCTGCCGAGCCCGGGGCCGGACAAGGAGCCGGAGCGGGAGGCGGCGGGGTCGGGGTCCGGGTCGGCCACCACCCCGCGCTCCCCCGCGCAGCTCGGGAGCTCGCAGCTGCACCGGTGGTCGCGGGCCCGCGCGCACCGGTCCGGGCGGCGGCTGGAGTGGCCGACGATACGGGACCGCGGCAGCGGCGGGGCCTCGTCGCCGCCGACCCCGACCAGGCCGCACCCGTCGTCCGACGAGGCGGCGTCCGCGGCGGCGAAGGTCGCGGTGGAGGAGGAGGATGGCTACGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB647507             [             AACACGACCCTAAAACGAGAAGAAGAAAAAATCCCTCTCCTCGTCGTAC GGTCGTCGCGCGTAGTAAGCTC AAGC TCAGTAGGGGAATCGAGGATGTCGTCGTCGTCGTCGACGTCCCCGCGGTTCGGCTCGATGATAAGCGCGAAGCTGGCGTCGCCGCCGCCGTCGCTGCTCCTCCCGCCGTCGCCTCGCCTACAGGGCCGCCGCCTGACGCCGCCCTCGTGCACGCCCGGCACCCCCGCCGCGCTGCCGAGCCCGGGGCCGGACAAGGAGCCGGAGCGGGAGGCGGCGGGGTCGGGGTCCGGGTCGGCCACCACCCCGCGCTCCCCCGCGCAGCTCGGGAGCTCGCAGCTGCACCGGTGGTCGCGGGCCCGCGCGCACCGGTCCGGGCGGCGGCTGGAGTGGCCGACGATACGGGACCGCGGCAGCGGCGGGGCCTCGTCGCCGCCGACCCCGACCAGGCCGCACCCGTCGTCCGACGAGGCGGCGTCCGCGGCGGCTAAGGTCGCGGTGGAGGAGGAGGATGGCTACGGGGTGGTTGGGAGGGACGAGGCGGCGAAGTCGATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB660854             [                 CGAAGCGAAAACGAGAAGAAGAAAAAATCCCCCTCCTCGTCGTAC GGTCGTCGCGCGTAGTAAGCTC AAGC TCAGTAGGGGAATCGAGGATGTCGTCGTCGTCGTCGACGTCCCCGCGGTTCGGCTCGATGATAAGCGCGAAGCTGGCGTCGCCGCCGCCGTCGCTGCTCCTCCCGCCGTCGCCTCGCCTACAGGGCCGCCGCCTGACGCCGCCCTCGTGCACGCCCGGTACCCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF325357             [                                                                                                                                                                                          GCTCCTCCCGCCGTCGCCTCGCCTACAGGGCCGCCGCCTGACGCCGCCCTCGTGCACGCCCGGCACCCCCGCCGCGCTGCCGAGCCCGGGGCCGGACAAGGAGCCGGAGCGGGAGGCGGCGGGGTCGGGGTCCGGGTCGGCCACCACCCCGCGCTCCCCCGCGCAGCTCGGGAGCTCGCAGCTGCACCGGTGGTCGCGGGCCCGCGCGCACCGGTCCGGGCGGCGGCTGGAGTGGCCGACGATACGGGACCGCGGCAGCGGCGGGGCCTCGTCGCCGCCGACCCCGACCAGGCCGCACCCGTCGTCCGACGAGGCGGCGTCCGCGGCGGCGAAGGTCGCGGTGGAGGAGGAGGATGGCTACGGCGTGGTTGGGAGGGACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB657510             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCGGTGGAGGAGGAGGATGGCTACGGGGTGGTTGGGAGGGACGAGGCGGCGAAGTCGATCTACATGGTGTCCGACGGGACGGGGTGGACGGCGGAGCACTCCGTCAACGCCGCGCTCGGCCAGTTCGAGCACTGCCTCGTCGACCGCGGCTGCGCCGTCAACACACACCTCTTCAACGGGATTGATGACATGGATAGACTTATTGAGATAGTAAAGCAAGCAGCAAAAGAAGGAGCACTGGTTTTATATACTCTTGCTGATCCTTCAATGGCTGAGGCAACTAAGAAGGCCTGTGAGCTTTGGGGTGTTCCATCCAATGATATTCTTCGTCCTACTATTGAAGCCATAGCTTCCCATATTGGTGTTGCTCCATCTGGAATTCCACGAAGTTCTCCTAGCCGGAAGGGTCAACTTACTGAGGATTACTTCCGACGAATTGAAGCTATTGATTTTACCATCAAACAAGATGACGGTGCTCAGCCACAGAACCTTAACCGTGCACACATTGTACTTGTTGGTGTTTCACGTACTGGAAAGACACCATTGTCAATATATCTGGCTCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGTCCCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTCTTCAAGCAATCAGGAAGGCAAGGGCCAAAACTCTAGGATTTCATGGGCAAAAAAGCAATTATGCTGAAATGGAACATGTCAGGNGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATCCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB657511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATCTGGCTCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGTCCCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTCTTCAAGCAATCAGGAAGGCAAGGGCCAAAACTCTAGGATTTCATGGGCAAAAAAGCAATTATGTTGAAATGGAACATGTCAGGGGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATCCTATATGGCCAGTCATAGAAGTCACTGGAAAAGCTATAGAGGAAACAGCTGCTGTCGTTGTGAGGATATTCCATGATAGGAAACAGAAGTGCGCCATGCCACGCATATCAAAACGGGTGGCTCCAATTAGAATATACGATTATCTGTCAGAGATGGTTACCACTCACGTTGAGTATCAAAAGATTTTTGCTAGGGACTTTTAAGTTTATTCTGCAGCTGTGAAGTGAATCCAAAATTTTAAAAAACTACCCTCTATCCGGCATTTTTCACGTGTCCCATATTAGGTTAGCATCACCTGTGCATAGAGAGGGTTTTAATTCATTTTGTAGATCATCACCCCCTTGTGAGCTGTGTGTCATATTCTTTGTTGGTTAGTTTAACTCTTTGTTGAAGTCATGTACTCCCCCTCTTACGGAAATGACATATGAGTAAAAGCCAATTCTTTCAAAAAAAAACAAACAAAAGGGAA]




>consensus_12862#0
TCGGCTCGTCGCCAACACGAAGCGAAAACGAGAAGAAGAAAAAATCCCTCTCCTCGTCGT
ACGGTCGTCGCGCGTAGTAAGCTCAAGCTCAGTAGGGGAATCGAGGATGTCGTCGTCGTC
GTCGACGTCCCCGCGGTTCGGCTCGATGATAAGCGCGAAGCTGGCGTCGCCGCCGCCGTC
GCTGCTCCTCCCGCCGTCGCCTCGCCTACAGGGCCGCCGCCTGACGCCGCCCTCGTGCAC
GCCCGGCACCCCCGCCGCGCTGCCGAGCCCGGGGCCGGACAAGGAGCCGGAGCGGGAGGC
GGCGGGGTCGGGGTCCGGGTCGGCCACCACCCCGCGCTCCCCCGCGCAGCTCGGGAGCTC
GCAGCTGCACCGGTGGTCGCGGGCCCGCGCGCACCGGTCCGGGCGGCGGCTGGAGTGGCC
GACGATACGGGACCGCGGCAGCGGCGGGGCCTCGTCGCCGCCGACCCCGACCAGGCCGCA
CCCGTCGTCCGACGAGGCGGCGTCCGCGGCGGCGAAGGTCGCGGTGGAGGAGGAGGATGG
CTACGGGGTGGTTGGGAGGGACGAGGCGGCGAAGTCGATCTACATGGTGTCCGACGGGAC
GGGGTGGACGGCGGAGCACTCCGTCAACGCCGCGCTCGGCCAGTTCGAGCACTGCCTCGT
CGACCGCGGCTGCGCCGTCAACACACACCTCTTCAACGGGATTGATGACATGGATAGACT
TATTGAGATAGTAAAGCAAGCAGCAAAAGAAGGAGCACTGGTTTTATATACTCTTGCTGA
TCCTTCAATGGCTGAGGCAACTAAGAAGGCCTGTGAGCTTTGGGGTGTTCCATCCAATGA
TATTCTTCGTCCTACTATTGAAGCCATAGCTTCCCATATTGGTGTTGCTCCATCTGGAAT
TCCACGAAGTTCTCCTAGCCGGAAGGGTCAACTTACTGAGGATTACTTCCGACGAATTGA
AGCTATTGATTTTACCATCAAACAAGATGACGGTGCTCAGCCACAGAACCTTAACCGTGC
ACACATTGTACTTGTTGGTGTTTCACGTACTGGAAAGACACCATTGTCAATATATCTGGC
TCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGTC
CCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTCTTCA
AGCAATCAGGAAGGCAAGGGCCAAAACTCTAGGATTTCATGGGCAAAAAAGCAATTATGC
TGAAATGGAACATGTCAGGGGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATCC
TATATGGCCAGTCATCGAAGTCACTGGAAAAGCTATAGAGGAAACAGCTGCTGTCGTTGT
GAGGATATTCCATGATAGGAAACAGAAGTGCGCCATGCCACGCATATCAAAACGGGTGGC
TCCAATTAGAATCTACGATTATCTGTCAGAGATGGTTAACACTCACGTTGAGTATCAAAA
GATTTTTGCTAGGGACTTTTAAGTCTATTCTGCAGCTGTGAAGTGAATCCAAAAGTCTAA
AAAACTACCCACTATCCGGCATTTTTCACGTGTCCCATATTAGGTTAGCATCACCTGTGC
ATAGAGAGGGTTTTAATTCATTTTGTAGATCATCACCACCTTGTGAGCTGTGTGTCATAT
TCTTTGTTCGTTCGTTTAACTCTTTGTTGAAGTCATGTACTACCACTCTTACGGAAATGA
CATATGAGTAAAAGACAATTCTTTCAAAAAAAAACAAACAAAAGGGAA

consensusID : consensus_12862#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 824
fasta sequence

                              [CTGTGAGCTTGGGGGTGTTCCATCCCAATGATATTCTTCGTCCTACTATGGAAGCCATAGCTTCCCATATTGGTGTTGCTCCATCTGGAATTCCACGAAGTTCTCCTAGCCGGAAGGGTCAACTTACTGAGGATTACTTCCGACGAATTGAAGCTATTGATTTTACCATCAAACAAGATGACGGTGCTCAGCCACAGAACCTTAACCGTGCACACATTGTACTTGTTGGTGTTTCACGTACTGGAAAGACACCATTGTCAATATATCTGGCTCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGTCCCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTCTTCAAGCAATCAGGAAGGCAAGGGCCAAAACTCTAGGATTTCATGGGCAAAAAAGCAATTATGCTGAAATGGAACATGTCAGGGGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATCCTATATGGCCAGTCATCGAAGTCACTGGAAAAGCTATAGAGGAAACAGCTGCTGTCGTTGTGAGGATATTCCATGATAGGAAACAGAAGTGCGCCATGCCACGCATATCAAAACGGTACTAGCACCACGTTCTATTTCTTTTGCGTCTTGTAAAGTACATGTGTTTTGATAAATGTCAAGAGTACCTTAGCCCGCACTTATTTTTATTAACTCTTAATTTGTGTTACCCCCTTTTAGGTGGCTTCTGTATCTAAACTGAAAAAGGGCATATTGCACAGCAAATAAATGTATATTTCATTGAAAAAAAAAAAGGA]

[-] EMBL CB649178             [CTGTGAGCTTGGGGGTGTTCCATCCCAATGATATTCTTCGTCCTACTATGGAAGCCATAGCTTCCCATATTGGTGTTGCTCCATCTGGAATTCCACGAAGTTCTCCTAGCCGGAAGGGTCAACTTACTGAGGATTACTTCCGACGAATTGAAGCTATTGATTTTACCATCAAACAAGATGACGGTGCTCAGCCACAGAACCTTAACCGTGCACACATTGTACTTGTTGGTGTTTCACGTACTGGAAAGACACCATTGTCAATATATCTGGCTCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGTCCCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTCTTCAAGCAATCAGGAAGGCAAGGGCCAAAACTCTAGGATTTCATGGGCAAAAAAGCAATTATGCTGAAATGGAACATGTCAGGGGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATCCTATATGGCCAGTCATCGAAGTCACTGGAAAAGCTATAGAGGAAACAGCTGCTGTCGTTGTGAGGATATTCCATGATAGGAAACAGAAGTGCGCCATGCCACGCATATCAAAACGGTACTAGCACCACGTTCTATCTCTTCTGCGTCTTGTAAAGTACATGTGTTTTGATAAAAAAGGGGAGTACCTTAGCCCGCACTTATTTTTATGAAaaaaaagga                                                                                               ]
[-] EMBL CB660855             [                                                                                                                                                                                GATGGCGGTGCTCAGCCACAGAACCTTAACCGTGCACACATTGTACTTGTTGGTGTTTCACGTACTGGAAAGACACCATTGTCAATATATCTGGCTCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGTCCCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTCTTCAAGCAATCAGGAAGGCAAGGGCCAAAACTCTAGGATTTCATGGGCAAAAAAGCAATTATGCTGAAATGGAACATGTCAGGGGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATCCTATATGGCCAGTCATCGAAGTCACTGGAAAAGCTATAGAGGAAACAGCTGCTGTCGTTGTGAGGATATTCCATGATAGGAAACAGAAGTGCGCCATGCCACGCATATCAAAACGGTACTAGCACCACGTTCTATTTCTTTTGCGTCTTGTAAAGTACATGTGTTTTGATAAATGTCAAGAGTACCTTAGCCCGCACTTATTTTTATTAACTCTTAATTTGTGTTACCCCCTTTTAGGTGGCTTCTGTATCTAAACTGAAAAAGGGCATAT                                           ]
[-] EMBL CB647508             [                                                                                                                                                                                                        CTTAACCGTGCACACATTGTACTTGTTGGTGTTTCACGTACTGGAAAGACACCATTGTCAATATATTTGGCTCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGTCCCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTTTTCAAGCAATCAGGAAGGCAAGGGCCAAAACTTTAGGATTTCATGGGCAAAAAAGCAATTATGCTGAAATGGAACATGTCAGGGGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATCCTATATGGCCAGTCATTGAAGTCACTGGAAAAGCTATAGAGGAAACAGCTGCTGTCGTTGTGAGGATATTCCATGATAGGAAACAGAAGTGCGCCATGCCACGCATATCAAAACGGTACTAGCACCACGTTTTATTTTTTTTGCGTTTTGTAAAGTACATGTGTTTTGATAAATGTCAAGAGTACCTTAGCCCGCACTTATTTTTATTAACTCTTAATTTGTGTTACCACCTTCTAGGTGGCTTCTGTATTTAAA TGAATAA GGCATAGTGCACAGCAAATAAATGTATATTTCATTGAAAAAAAAAAAGGA]




>consensus_12862#1
CTGTGAGCTTGGGGGTGTTCCATCCCAATGATATTCTTCGTCCTACTATGGAAGCCATAG
CTTCCCATATTGGTGTTGCTCCATCTGGAATTCCACGAAGTTCTCCTAGCCGGAAGGGTC
AACTTACTGAGGATTACTTCCGACGAATTGAAGCTATTGATTTTACCATCAAACAAGATG
ACGGTGCTCAGCCACAGAACCTTAACCGTGCACACATTGTACTTGTTGGTGTTTCACGTA
CTGGAAAGACACCATTGTCAATATATCTGGCTCAAAAAGGGTATAAAGTGGCAAATGTTC
CAATTGTAATGGGAGTGAATCTTCCAAAGTCCCTTTTTGAGATTGATCAAGACAAGATTT
TTGGATTGACAATAAACCCTGTGGTTCTTCAAGCAATCAGGAAGGCAAGGGCCAAAACTC
TAGGATTTCATGGGCAAAAAAGCAATTATGCTGAAATGGAACATGTCAGGGGGGAGTTGG
ATCATGCCAATCAAATTTTCGCCCAGCATCCTATATGGCCAGTCATCGAAGTCACTGGAA
AAGCTATAGAGGAAACAGCTGCTGTCGTTGTGAGGATATTCCATGATAGGAAACAGAAGT
GCGCCATGCCACGCATATCAAAACGGTACTAGCACCACGTTCTATTTCTTTTGCGTCTTG
TAAAGTACATGTGTTTTGATAAATGTCAAGAGTACCTTAGCCCGCACTTATTTTTATTAA
CTCTTAATTTGTGTTACCCCCTTTTAGGTGGCTTCTGTATCTAAACTGAAAAAGGGCATA
TTGCACAGCAAATAAATGTATATTTCATTGAAAAAAAAAAAGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12862#0      TCGGCTCGTCGCCAACACGAAGCGAAAACGAGAAGAAGAAAAAATCCCTCTCCTCGTCGT 60
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      ACGGTCGTCGCGCGTAGTAAGCTCAAGCTCAGTAGGGGAATCGAGGATGTCGTCGTCGTC 120
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      GTCGACGTCCCCGCGGTTCGGCTCGATGATAAGCGCGAAGCTGGCGTCGCCGCCGCCGTC 180
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      GCTGCTCCTCCCGCCGTCGCCTCGCCTACAGGGCCGCCGCCTGACGCCGCCCTCGTGCAC 240
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      GCCCGGCACCCCCGCCGCGCTGCCGAGCCCGGGGCCGGACAAGGAGCCGGAGCGGGAGGC 300
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      GGCGGGGTCGGGGTCCGGGTCGGCCACCACCCCGCGCTCCCCCGCGCAGCTCGGGAGCTC 360
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      GCAGCTGCACCGGTGGTCGCGGGCCCGCGCGCACCGGTCCGGGCGGCGGCTGGAGTGGCC 420
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      GACGATACGGGACCGCGGCAGCGGCGGGGCCTCGTCGCCGCCGACCCCGACCAGGCCGCA 480
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      CCCGTCGTCCGACGAGGCGGCGTCCGCGGCGGCGAAGGTCGCGGTGGAGGAGGAGGATGG 540
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      CTACGGGGTGGTTGGGAGGGACGAGGCGGCGAAGTCGATCTACATGGTGTCCGACGGGAC 600
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      GGGGTGGACGGCGGAGCACTCCGTCAACGCCGCGCTCGGCCAGTTCGAGCACTGCCTCGT 660
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      CGACCGCGGCTGCGCCGTCAACACACACCTCTTCAACGGGATTGATGACATGGATAGACT 720
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      TATTGAGATAGTAAAGCAAGCAGCAAAAGAAGGAGCACTGGTTTTATATACTCTTGCTGA 780
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      TCCTTCAATGGCTGAGGCAACTAAGAAGGCCTGTGAGCTTTGGGGTGTTCCATCC-AATG 839
consensus_12862#1      ------------------------------CTGTGAGCTTGGGGGTGTTCCATCCCAATG 30
                                                     ********** ************** ****

consensus_12862#0      ATATTCTTCGTCCTACTATTGAAGCCATAGCTTCCCATATTGGTGTTGCTCCATCTGGAA 899
consensus_12862#1      ATATTCTTCGTCCTACTATGGAAGCCATAGCTTCCCATATTGGTGTTGCTCCATCTGGAA 90
                       ******************* ****************************************

consensus_12862#0      TTCCACGAAGTTCTCCTAGCCGGAAGGGTCAACTTACTGAGGATTACTTCCGACGAATTG 959
consensus_12862#1      TTCCACGAAGTTCTCCTAGCCGGAAGGGTCAACTTACTGAGGATTACTTCCGACGAATTG 150
                       ************************************************************

consensus_12862#0      AAGCTATTGATTTTACCATCAAACAAGATGACGGTGCTCAGCCACAGAACCTTAACCGTG 1019
consensus_12862#1      AAGCTATTGATTTTACCATCAAACAAGATGACGGTGCTCAGCCACAGAACCTTAACCGTG 210
                       ************************************************************

consensus_12862#0      CACACATTGTACTTGTTGGTGTTTCACGTACTGGAAAGACACCATTGTCAATATATCTGG 1079
consensus_12862#1      CACACATTGTACTTGTTGGTGTTTCACGTACTGGAAAGACACCATTGTCAATATATCTGG 270
                       ************************************************************

consensus_12862#0      CTCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGT 1139
consensus_12862#1      CTCAAAAAGGGTATAAAGTGGCAAATGTTCCAATTGTAATGGGAGTGAATCTTCCAAAGT 330
                       ************************************************************

consensus_12862#0      CCCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTCTTC 1199
consensus_12862#1      CCCTTTTTGAGATTGATCAAGACAAGATTTTTGGATTGACAATAAACCCTGTGGTTCTTC 390
                       ************************************************************

consensus_12862#0      AAGCAATCAGGAAGGCAAGGGCCAAAACTCTAGGATTTCATGGGCAAAAAAGCAATTATG 1259
consensus_12862#1      AAGCAATCAGGAAGGCAAGGGCCAAAACTCTAGGATTTCATGGGCAAAAAAGCAATTATG 450
                       ************************************************************

consensus_12862#0      CTGAAATGGAACATGTCAGGGGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATC 1319
consensus_12862#1      CTGAAATGGAACATGTCAGGGGGGAGTTGGATCATGCCAATCAAATTTTCGCCCAGCATC 510
                       ************************************************************

consensus_12862#0      CTATATGGCCAGTCATCGAAGTCACTGGAAAAGCTATAGAGGAAACAGCTGCTGTCGTTG 1379
consensus_12862#1      CTATATGGCCAGTCATCGAAGTCACTGGAAAAGCTATAGAGGAAACAGCTGCTGTCGTTG 570
                       ************************************************************

consensus_12862#0      TGAGGATATTCCATGATAGGAAACAGAAGTGCGCCATGCCACGCATATCAAAACGGGTGG 1439
consensus_12862#1      TGAGGATATTCCATGATAGGAAACAGAAGTGCGCCATGCCACGCATATCAAAACGG---- 626
                       ********************************************************    

consensus_12862#0      CTCCAATTAGAATCTACGATTATCTGTCAGAGATGGTTAACACTCACGTTGAGTATCAAA 1499
consensus_12862#1      -TACTAGCACCACGTTCTATTTCTTTTGCGTCTTG--TAAAGTACATGT---GTTTTGAT 680
                        * * *  *  *  * * ***   * *  *   **  ***    ** **   ** *  * 

consensus_12862#0      AGATTTTTGCTAGGGACTTTTAAGTCTATTCTGCAGCTGTGAAGTGAATCCAAAAGTCTA 1559
consensus_12862#1      AAAT----GTCAAGAGTACCTTAGCCCGCACT-TATTTTT--ATTAACTCTTAATTTGTG 733
                       * **    *  * *      * ** *    **  *  * *  * * * **  **  * * 

consensus_12862#0      AAAAACTACCCACTATCCGGCATTTTTCACGTGTCCCATATTAGGTTAGCATCACCTGTG 1619
consensus_12862#1      -----TTACCCCCTTTTAGGTGGCTTCTGTAT---CTAAACTGAAAAAGGGCATATTGCA 785
                             ***** ** *  **    **     *   * * * *     **       **  

consensus_12862#0      CATAGAGAGGGTTTTAATTCATTTTGTAGATCATCACCACCTTGTGAGCTGTGTGTCATA 1679
consensus_12862#1      CAGCAAATAAATGTATATTTCATTGAAAAAAAAAAAGGA--------------------- 824
                       **   *     * *  ***   **   * *  *  *  *                     

consensus_12862#0      TTCTTTGTTCGTTCGTTTAACTCTTTGTTGAAGTCATGTACTACCACTCTTACGGAAATG 1739
consensus_12862#1      ------------------------------------------------------------
                                                                                   

consensus_12862#0      ACATATGAGTAAAAGACAATTCTTTCAAAAAAAAACAAACAAAAGGGAA 1788
consensus_12862#1      -------------------------------------------------