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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12875#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1893 fasta sequence
[ACCACCGCCGAATGCCGCATCTCCCGACATCCGGCTCCCGCGAACTCATCCCCCCTTTCCACGGTTTCCGTCGATCGAAACCCTAACCCTAGGGTATAGAGAGGATGAGGCCCTCGGCGGCGGCGGGCGGCGGCGGCGGCGGCGGCGGGAGGCGGAAAGCGGCGGCGGCGGCGGCCGCGGCGAGCCGGGAGTGGCTGGTCGTGCCGGCGTCGGGGCAGGCGCGGGTGGAGGAGGCCGGGAAGCACGCGGTGATGGCGCGGACGGGGCTGCCGGCGCGCGACCTGCGGGTGCTGGACCCGCTGCTGTCGTACCCTTCCACGATCCTGGGTCGCGAGCGCGCCATCGTCGTCAACCTGGAGCGCGTCAAGGCCGTGATCACCGCCGCCGAGGTGCTGCTCCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCGCGTCCTCGCCTCGTCCTCCGACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCTGGTCGTGTGCAGAAGGTGAGGGATGAACTTGAGCATTTGTTGGATGATGAAATGGACATGGCTGAAATGTATTTGACAGAAAAGCTTACTCGACAAGAAATAAGTGAGACTTCATCTAGAGTTGAGGTTGATGACCCATCTCAACTGGAGGTGGATAGGGATGAAGATTATAGAAGTGAGGCAGATGTAAGCAATGGTACCTTTATTGGCTATAAGCCACACATTGAAGAACTGGAGATGCTTTTGGAGGCCTACTTTGTTCAAATTGATGGCACACTTAATAAGCTATCTCATCTGAGAGAGTATGTTGATGATACAGAAGATTATATCAACATCATGTTGGATGACAAGCAAAATCAACTTCTACAGATGGGGGTCATGCTCTCCACTGCAACTGTTGTCATTACTGCTGGAGTGGCCGTTGTTGGTCTTTTTGGGATGAATATC-GGTATATCGCTTTATGCTGATCCTACA-AATGA-GGAGGAGAAACGAGCATCAAACATGAAATTTTGGGAAACCA-CTTTGGGAACCA-TTGCTGGCTGCACGGTTATGTACATAGTAGCCATGGGTTGGGGGAAGAGAAGTGGACTGCTGCAATAATGAGGGTGCCACGATGAATCACACAAGTTGACGATTGCTAGCCTGGTCAGACA-AAGCTCTATAAACA-AGAAGACAACATAGGGCTCGACTGTATACCTCCTTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAA-GGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACAATGTAACTCGGTTTTTGATATTTCGGATGG-TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTG-CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTAGTACATCATATTCATAAGGAAGTACTAAGAGCA-TGTCTTATCTGAAGGGTTAGTATGAGCTGTAAATG-AACA-TGTTATTCATAGGGAAATACTAAGAACTGTGAATGAAAAA]
[+] EMBL AK120875 [ACCACCGCCGAATGCCGCATCTCCCGACATCCGGCTCCCGCGAACTCATCCCCCCTTTCCACGGTTTCCGTCGATCGAAACCCTAACCCTAGGGTATAGAGAGGATGAGGCCCTCGGCGGCGGCGGGCGGCGGCGGCGGCGGCGGCGGGAGGCGGAAAGCGGCGGCGGCGGCGGCCGCGGCGAGCCGGGAGTGGCTGGTCGTGCCGGCGTCGGGGCAGGCGCGGGTGGAGGAGGCCGGGAAGCACGCGGTGATGGCGCGGACGGGGCTGCCGGCGCGCGACCTGCGGGTGCTGGACCCGCTGCTGTCGTACCCTTCCACGATCCTGGGTCGCGAGCGCGCCATCGTCGTCAACCTGGAGCGCGTCAAGGCCGTGATCACCGCCGCCGAGGTGCTGCTCCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCGCGTCCTCGCCTCGTCCTCCGACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCTGGTCGTGTGCAGAAGGTGAGGGATGAACTTGAGCATTTGTTGGATGATGAAATGGACATGGCTGAAATGTATTTGACAGAAAAGCTTACTCGACAAGAAATAAGTGAGACTTCATCTAGAGTTGAGGTTGATGACCCATCTCAACTGGAGGTGGATAGGGATGAAGATTATAGAAGTGAGGCAGATGTAAGCAATGGTACCTTTATTGGCTATAAGCCACACATTGAAGAACTGGAGATGCTTTTGGAGGCCTACTTTGTTCAAATTGATGGCACACTTAATAAGCTATCTCATCTGAGAGAGTATGTTGATGATACAGAAGATTATATCAACATCATGTTGGATGACAAGCAAAATCAACTTCTACAGATGGGGGTCATGCTCTCCACTGCAACTGTTGTCATTACTGCTGGAGTGGCCGTTGTTGGTCTTTTTGGGATGAATATC GGTATATCGCTTTATGCTGATCCTACA AATGA GGAGGAGAAACGAGCATCAAACATGAAATTTTGGGAAACCA CTTTGGGAACCA TTGCTGGCTGCACGGTTATGTACATAGTAGCCATGGGTTGGGGGAAGAGAAGTGGACTGCTGCAATAATGAGGGTGCCACGATGAATCACACAAGTTGACGATTGCTAGCCTGGTCAGACA AAGCTCTATAAACA AGAAGACAACATAGGGCTCGACTGTATACCTCCTTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAA AGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACAATGTAACTCGGTTTTTGATATTTCGGATGG TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTG CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTATTACATCAT ]
[+] EMBL CB648452 [ GATCGACCCCCTAACCCTAGGGTATAGAGAGGATGAGGCCCTCGGCGGCGGCGGGCGGCGGCGGCGGCGGCGGCGGGAGGCGGAAAGCGGCGGCGGCGGCGGCCGCGGCGAGCCGGGAGTGGCTGGTCGTGCCGGCGTCGGGGCAGGCGCGGGTGGAGGAGGCCGGGAAGCACGCGGTGATGGCGCGGACGGGGCTGCCGGCGCGCGACCTGCGGGTGCTGGACCCGCTGCTGTCGTACCCTTCCACGATCCTGGGTCGCGAGCGCGCCATCGTCGTCAACCTGGAGCGCGTCAAGGCCGTGATCACCGCCGCCGAGGTGCTGCTCCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCGCGTCCTCGCCTCGTCCTCCGACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCT ]
[+] EMBL CB639472 [ CGGAAAGCGGCGGCGGCGGCGGCCGCGGCGAGCCGGGAGTGGCTGGTCGTGCCGGCGTCGGGGCAGGCGCGGGTGGAGGAGGCCGGGAAGCACGCGGTGATGGCGCGGACGGGGCTGCCGGCGCGCGACCTGCGGGTGCTGGACCCGCTGCTGTCGTACCCTTCCACGATCCTGGGTCGCGAGCGCGCCATCGTCGTCAACCTGGAGCGCGTCAAGGCCGTGATCACCGCCGCCGAGGTGCTGCTCCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCGCGTCCTCGCCTCGTCCTCCGACCATGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTTACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTGTGCCCACA ]
[+] EMBL CB669655 [ CGTCAACCCGTAGCGCGTCAAGGCCGTGATCACCGCCGCCGAGGTGCTGCTCCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCGCGTCCTCGCCTCGTCCTCCGACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCTGGTCGTGTGCAGAAGGTGAGGGATGAACTTGAGCATTTGTTGGATGATGAAATGGACATGGCTGAAATGTATTTGACAGAAAAGCTTACTCGACAAGAAATAAGTGAGACTTCATCTAGAGTTGAGGTTGATGACCCATCTCAACTGGAGGTGGATAGGGATGAAGATTATAGAAGTGAGGCAGATGTAAGCAATGGTACCTTTATTGGCTATAAGCCACACATTGAAGAACTGGAGATGCTTTTGGAGGCCTACTTTGTTCAAATTGATGGCACACTTAATAAGCTATCTCATCTGAGAGAGTATGTTGATGATACAGAAGATTATATCAACATCATGTTGGATGACAAGCAAAATCCACTTCTACAGATGGG ]
[+] EMBL AK072213 [ CCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCACGTCCTCGCCTCGTCCTCCGACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCTGGTCGTGTGCAGAAGGTGAGGGATGAACTTGAGCATTTGTTGGATGATGAAATGGACATGGCTGAAATGTATTTGACAGAAAAGCTTACTCGACAAGAAATAAGTGAGACTTCATCTAGAGTTGAGGTTGATGACCCATCTCAACTGGAGGTGGATAGGGATGAAGATTATAGAAGTGAGGCAGATGTAAGCAATGGTACCTTTATTGGCTATAAGCCACACATTGAAGAACTGGAGATGCTTTTGGAGGCCTACTTTGTTCAAATTGATGGCACACTTAATAAGCTATCTCATCTGAGAGAGTATGTTGATGATACAGAAGATTATATCAACATCATGTTGGATGACAAGCAAAATCAACTTCTACAGATGGGGGTCATGCTCTCCACTGCAACTGTTGTCATTACTGCTGGAGTGGCCGTTGTTGGTCTTTTTGGGATGAATATC GGTATATCGCTTTATGCTGATCCTACA AATGA GGAGGAGAAACGAGCATCAAACATGAAATTTTGGGAAACCA CTTTGGGAACCA TTGCTGGCTGCACGGTTATGTACATAGTAGCCATGGGTTGGGGGAAGAGAAGTGGACTGCTGCAATAATGAGGGTGCCACGATGAATCACACAAGTTGACGATTGCTAGCCTGGTCAGACA AAGCTCTATAAACA AGAAGACAACATAGGGCTCGACTGTATACCTCCTTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAA GGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACAATGTAACTCGGTTTTTGATATTTCGGATGG TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTG CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTATTACATCATATTCATAAGGAAGTACTAAGAGCA TGTCTTATCTGAAGGGTTAGTATGAGCTGTAAATG AACA TGTTATTCATAGGGAAATACTAAGA ]
[+] EMBL AY224580 [ GACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCAGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCTGGTCGTGTGCAGAAGGTGAGGGATGAACTTGAGCATTTGTTGGATGATGAAATGGACATGGCTGAAATGTATTTGACAGAAAAGCTTA ]
[-] EMBL CB648453 [ GATGATACAGAAGATTATATCAACATCATGTTGGATGACAAGCAAAATCAACTTCTACAGATGGGGGTCATGCTCTCCACTGCAACTGTTGTCATTACTGCTGGAGTGGCCGTTGTTGGTCTTTTTGGGATGAATATC GGTATATCGCTTTATGCTGATCCTACA AATGA GGAGGAGAAACGAGCATCAAACATGAAATTTTGGGAAACCC CTTTGGGAACCA TTGCTGGCTGCACGGTTATGTACATAGTAGCCATGGGTTGGGGGAAGAGAAGTGGACTGCTGCAATAATGAGGGTGCCCCGATGAATCACCCAAGTTGACGATTGCTAGCCTGGTCAGACA AAGCTCTATAAACA AGAAGACAACATAGGGCTCGACTGTATACCTCCTTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAA GGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACAATGTAACTCGGTTTTTGATATTTCGGATGG TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATGGTTTGTG CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTATTACCTCATATTTTTAAGGGAGTACTAAGAG ]
[+] EMBL BI807813 [ tgTGTTC TTTTGGGATGAATATCGGGTATTTTCCTTTATGCTGATCCTACACAATGAGGGAGGAGAAACGAGCATCAAACATGAAATTTTGGGAAACCACCTTTGGGAACCACTTGCTGGCTGCACGGTTATGTACATAGTA CCAT GGTT GGGGAAGAGAAGTGGACT CTGCAATAATGAGGGTTCCACGATGAATCACACAAGTTGACGATTGCTAGCCTGGTCAGACACAAGCTCTATAAACACAGAAGACAACATAGGGCTCGACTGTATACCTCCGTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAA GGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACCATGTAACTCGGTTTTTGATATTTCGGATGG TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTG CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTAGTACATCATATTCATAAGGAAGTACTAAGAGCA TGTCTTATCTGAAGGGTTAGTATGAGCTGTAAATG ACA TGTTATTCATAGGGAAATACTAA ]
[+] EMBL AU165029 [ CTGTATACCTCCTTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAAGGGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACAATGTAACTCGGTTTTTG ATTTCGGATGG TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTG CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTAGTACATCATATTCATAAGGAAGTACTAAGAGCA TGTCTTATCTGAAaaa ]
[-] EMBL AU165030 [ TGTATACCTCCTTGAAAAAAAAAAAACGTTGCTTTGATGGCTTGCATGTGCAA GGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTTTGCGCGGCGATGCATGATGTAACTGAGAGATGGATAACAATGTAACTCGGTTTTTG ATTTCGGATGG TTGCACGATTGCTTGTTTGCAAGCCGTTGTACTAATAGTTTGTG CTGTTGTTGGATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTAGTACATCAAATTCATAAGGAAGTACTAAGAGCA TGTCTTATCTGAAaaaa ]
[+] EMBL BI800114 [ CTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAAC ATGTAACTCGGTTTTTGATATTTCGGATGGCTTGCACCATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTGCCTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTAGTACATCATATTCATAAGGAAGTACTAAGAGCACTGTCTTATCTGAAGGGTTAGTATGACCTGTAAATGAAACACTGTTATTCATAGGGAAATACTAAGAACTGTGAATGAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||