These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12878#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1261 fasta sequence [CTGCCATGGACTGAAGGAGTAGAAAATTTTTCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCGGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATAT-GGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCACAGCAGTACGTGATTTTAGTTCTCTCTTTGGATTCTATTCAATGCAGTCAAATCTAAAATCAT] [+] EMBL CF329123 [CTGCCATGGACTGAAGGAGTAGAAAATTTTTCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCGGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCTGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTTAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATATGGGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAA ] [+] EMBL AK121988 [ catcctgCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCGGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATAT GGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCACAGCAGTACGTGATTTTAGTTCTCTCTTTGGATTCTATTCAATGCAGTCAAATCTAAAATCAT] [+] EMBL CF327332 [ GCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCGGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATAT GGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATCACAAGTAAAACCAGCTCCTGCGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAG ] [+] EMBL C28235 [ GGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAG GGAGGCTTCCGCCGCCGG GTACCGGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTTAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATAC ] [+] EMBL CA998462 [ CCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATAT GGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTAT ] [+] EMBL BP184854 [ CAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATAT GGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATAT ] consensusID : consensus_12878#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 837 fasta sequence [ACCGTTGGGGACTTATGGTCTAAGTTCACTTCTAGGCTGAAGGTTCCCCCAACTTTNGTCATCTGCCCCAAATTATGGCTGGTTCTGTGCCTAGCATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCT-CCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTG-AT-CCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCACAGCAGTACGTGATTTTAGTTCTCAAAAAAAAAAAAAAACACTGTCATGCCGTTCGTAGC] [+] EMBL C97579 [ACCGTTGGGGACTTATGGTCTAAGTTCACTTCTAGGCTGAAGGTTCCCCCAACTTTNGTCATCTGCCCCAAATTATGGCTGGTTCTGTGCCTAGCATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCT CCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTG AT CCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCACAGCAGTACGTGATTTTAGTTCTCAAAAAAAAAAAA ] [-] EMBL CF309155 [ CAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATGGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTG AT CCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCACAGCAGTACGTGATTTTAGTTCTCAAAAAAAAAAAAAAACACTGTCATGCCGTTCGTAGC] [-] EMBL AU077987 [ gccncagAGTCTAAAAACAAGAAGATGATGAT GAATTGCAGGATTGCATTTGGNCTATTTTCGCAATCC TTGCAATTTCTT GATGCTTCAGTAGCTTAATAGTTCATC GATTAGCTTGCGACAT ATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGCATGCCAA ] consensusID : consensus_12878#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 618 fasta sequence [GCAATAAGCCCAAGACCCAACGGCGGGCTGACGGCTCACAATTCCCATCCTGCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCTGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCGTTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATATGGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGGTGTGTCCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAAC] [+] EMBL CF309154 [GCAATAAGCCCAAGACCCAACGGCGGGCTGACGGCTCACAATTCCCATCCTGCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCTGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCGTTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATATGGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGGTGTGTCCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAAC] consensusID : consensus_12878#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 511 fasta sequence [AGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTTTTGGATTTTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCCCAGCAGTAAAAAAAAAAAAAA] [-] EMBL CF329122 [AGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTTTTGGATTTTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCCCAGCAGTAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12878#1 ------------------------------------------------------------ consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 CTGCCATGGACTGAAGGAGTAGAAAATTTTTCCGCCGGCGGCTACCGCGGGCGGTGCTCG 60 consensus_12878#2 ------------------------------------------------------------ consensus_12878#1 ------------------------------------------------------------ consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 ACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCGGATGG 120 consensus_12878#2 ------------------------------------------------------------ consensus_12878#1 ------------------------------------------------------------ consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 AGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCG 180 consensus_12878#2 ------------------------------------------------------------ consensus_12878#1 ------------------------------------------------------------ consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 TCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTA 240 consensus_12878#2 ------------------------------------------------------------ consensus_12878#1 ------------------------------------------------------------ consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 TGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCG 300 consensus_12878#2 ------------------------------------------------------------ consensus_12878#1 ------------------------------------------------------------ consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 CTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAG 360 consensus_12878#2 ------------------------------------------------------------ consensus_12878#1 -----------------------------------------------------------A 1 consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 GCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTCAA 420 consensus_12878#2 ------------------------------------------------------------ consensus_12878#1 CCGTTGGGGACTTATGGTCTAAGTTCACTTCTAGGCTGAAGGTTCCCCCAACTTTNGTCA 61 consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 CCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTG-TCA 479 consensus_12878#2 ------------------------------------------------------------ consensus_12878#1 TCTGCCCCAAATTATGGCTGGTTCTGTGCCTAGCA-TGGACAAGCTCCCAATGGTGTGTC 120 consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 TCTGCACCAAAT-ATGGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTC 538 consensus_12878#2 ------------------------------------------------------------ consensus_12878#1 CATTGATCTAA-GGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTA-TGAAACATC 178 consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 CATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATC 598 consensus_12878#2 ------------------------------------------------------------ consensus_12878#1 ACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGA 238 consensus_12878#3 ------------------------------------------------------------ consensus_12878#0 ACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGA 658 consensus_12878#2 ---------------GCAATAAGCCCAAGACCCAACGGCGGGCTGACGGCTCACAATTCC 45 consensus_12878#1 AAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCC-TGTTCCAGGATGAAAC 297 consensus_12878#3 --------------------------------------------------AGGATGAAAC 10 consensus_12878#0 AAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAAC 718 consensus_12878#2 CATCCTGCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGAC---CTCGATGGCGAGCT 102 * * ** consensus_12878#1 CAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGC-TGGAAT 356 consensus_12878#3 CAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGC-TGGAAT 69 consensus_12878#0 CAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGC-TGGAAT 777 consensus_12878#2 CGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCTGATGGAGAACCCCTTCAGCGTGAAGG 162 * * * * ** * * **** * ** ** * consensus_12878#1 TGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGG-GACGAGAACGACAAGCTCCGT 415 consensus_12878#3 TGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGG-GACGAGAACGACAAGCTCCGT 128 consensus_12878#0 TGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGG-GACGAGAACGACAAGCTCCGT 836 consensus_12878#2 TGCT-CCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGC 221 ** * * * ** * ** ****** * ** * ** * *** consensus_12878#1 CAAATGCTCATAGAAG--AACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAA 473 consensus_12878#3 CAAATGCTCATAGAAG--AACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAA 186 consensus_12878#0 CAAATGCTCATAGAAG--AACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAA 894 consensus_12878#2 CCCATCTACCTAGGTGTCATACCGGGGCTTAA----TCAAGTTATGACCGCAACA-AGGG 276 * ** * *** * * * ** ** * ******* * * ** * consensus_12878#1 ATGGAGTGAAGGCCT-----------ACAACCCATGCTCGGACTGCTTTGATTGCCGGAG 522 consensus_12878#3 ATGGAGTGAAGGCCT-----------ACAACCCATGCTCGGACTGCTTTGATTGCCGGAG 235 consensus_12878#0 ATGGAGTGAAGGCCT-----------ACAACCCATGCTCGGACTGCTTTGATTGCCGGAG 943 consensus_12878#2 GCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAG----GAAG 332 * * * * **** **** **** * * *** * * * ** consensus_12878#1 GCGAAGTCGAAAAACAA-GAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTAT--T 579 consensus_12878#3 GCGAAGTCGAAAAACAA-GAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTAT--T 292 consensus_12878#0 GCGAAGTCGAAAAACAA-GAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTAT--T 1000 consensus_12878#2 TCAGGGTTAAAGAACATTGAAGCAGGCATTGG--CTGTGGAGTTG-GTATAGGCCACGGT 389 * ** ** **** **** * * *** ** * *** * * *** * * consensus_12878#1 TTCGCAATCCT--TTGCAATT---TCTTGGATTCTTCA-GTAGCTAAATAGTTCATCGGA 633 consensus_12878#3 TTCGCAATCCT--TTGCAATT---TTTTGGATTTTTCA-GTAGCTAAATAGTTCATCGGA 346 consensus_12878#0 TTCGCAATCCT--TTGCAATT---TCTTGGATTCTTCA-GTAGCTAAATAGTTCATCGGA 1054 consensus_12878#2 TTTGGAATAGGAATTGCGTTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGA 449 ** * *** **** * * **** * * * * * * * *** consensus_12878#1 TTAGCTTTCGACATAATA---TCCTCAGCAGAAGA----TCCACTCTTGTTGTTCAGGCC 686 consensus_12878#3 TTAGCTTTCGACATAATA---TCCTCAGCAGAAGA----TCCACTCTTGTTGTTCAGGCC 399 consensus_12878#0 TTAGCTTTCGACATAATA---TCCTCAGCAGAAGA----TCCACTCTTGTTGTTCAGGCC 1107 consensus_12878#2 G-AACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACC 508 * *** * * * * * ** ** **** *** **** * ** consensus_12878#1 AGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTC 746 consensus_12878#3 AGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTC 459 consensus_12878#0 AGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTC 1167 consensus_12878#2 AAATATG--GCTGGTTCTGTGCCTAGCAATGGACAAGCT-CCCAATGGGTGTGTCCCATT 565 * **** * * ** * ** *** ***** * ** ** * * consensus_12878#1 TGTGCTGAACATGCGCAGACTGATAGCA-TCACAGCAGTACGTGATTTTAGTTCTCAAAA 805 consensus_12878#3 TGTGCTGAACATGCGCAGACTGATAGCA-TCCCAGCAGTA----------------AAAA 502 consensus_12878#0 TGTGCTGAACATGCGCAGACTGATAGCA-TCACAGCAGTACGTGATTTTAGTTCTCTCTT 1226 consensus_12878#2 GATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATA---------------CAAGT 610 * * * * ** * ** * * * * ** consensus_12878#1 AAAAAAAAAAACACTGTCATGCCGTTCGTAGC--- 837 consensus_12878#3 AAAAAAAAA-------------------------- 511 consensus_12878#0 TGGATTCTATTCAATGCAGTCAAATCTAAAATCAT 1261 consensus_12878#2 AATGAAAC--------------------------- 618 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||