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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12908#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2355 fasta sequence
[ATCCGCGATCCATCCATCATCCCCTACCTCTCGCTCTCTCTCTCCTCTCCTCTCCTCTTATTATCATCGCATCCATCCCGCACTTCTCTCTCTTTGGTGGTGGTGCTCGCTCTCGCTCACCCTGCTTTGACCTTTGGATTTTTATTTTTAAGGATCCAAGAAAGTGCTGTTTCTTGGGTTGCTTGGAGGTGGAGGAGTTTGGGAGATTGTTTGTGTTTGATTGATTGGTTGATTGATTGGAGGAAGATGACGGTGGAGGAGAGGCAGGGGAGGGTGGGAGGCCATGGTGTGAGCGGCGGCGGCGGCGGGAGAGACCAGTTCCCGGTCGGCATGCGGGTGCTCGCCGTCGACGACGACCCCACCTGCCTCAAGATCCTCGAGAACCTCCTGCTTCGATGCCAGTATCACGTGACAACAACTGGTCAGGCGGCCACGGCCCTGAAGCTGCTCAGGGAGAACAAGGACCAGTTTGACCTGGTGATCAGCGACGTCCACATGCCGGACATGGATGGCTTCAAACTCCTTGAGCTTGTCGGCCTCGAGATGGACCTCCCAGTCATTATGTTGTCTGCGAACGGGGAAACACAAACTGTCATGAAGGGTATAACCCATGGTGCATGTGACTATCTTCTGAAGCCAGTGCGTCTTGAGCAGCTAAGGACGATATGGCAACATGTGATTAGGCGTAAGAATTGTGATGCTAAGAACCGTGGTAACGATGATGACGCTGGTCAGAAGGCACAGGGAATGAACAATGAAGGTGAGAGTATTGGTGCTAACCGCAACAAGAGGCAGTCACGGAAAAGTAGAGATGAGAATGGAGATGATGGTGATGATTCTGATGAGAACAGTAATGAGAATGGAGACTCATCAACACAGAAGAAGCCAAGGGTCGTGTGGTCTGTTGAGCTGCACCGAAAGTTTGTGGCTGCTGTTAACCAGCTTGGCATCGAGAAGGCTGTTCCAAAGAAAATATTGGATCTCATGAATGTAGAGAACATCACCAGGGAGAATGTTGCTAGTCATTTGCAGAAGTATCGGCTGTACCTTAAACGGTTGAGCACTGATGCAAGCAGGCAGGCTAACCTTGCAGCTGCATTTGGAGGAAGGAACCCTGCTTACATAAACATGAATTCATTTGGAAACTACAACGCATATGGTAGATACCGTACAGTCCCAACTGCTGGCCATACCCAGGCAAACAACATTCTTACTAGGATGAACTCCCCTTCTGCGTTTGGTGTTCATGGTTTGCTGCATTCACAGCCAATTCAGTTAGGACATGCCCAAAATAATCTGAGCACTTCACTGAATGATTTAGGAGGGCTTAATAATGGTAACATGATCAGAGGTGCACAGATGTCAACAATTCTAACTGGTCCTTCTGGTAACTCCTTTCCAAACATATCGAATGGTGCACCGCTGGCAACTGCAAACAGATCACTGCAACCTCTTGAGTCGAGCAATCAGCAACACCTTAGTCGGGTGCATTCATCTTCTGCAGATCCATTTAGCACACTTGTTGGTGAGTCTCCCCAGTTTCCTGATCTTGGAAGAACCACCAATACTTGGCAAACTGCGGTTCCATCCAACATTCAGGATCGTGGTCACAATGATAACATGTCGCAAGCCACCCTGCATATGAATGGCCCCAAAATTGAACCTGTCTCAAGCTTCACATCATCCAATCAGATTCCGCTGCTGGGAAATGAGATGCAGGGCCAAGTAGCATCACTAGCTAGCAATGTTCCAATAGCATTCAATCAGGACACATCACCATTCAACTATGGAAGCAGCACAAACTCAAGAGACATGCTAAATAACAGCCATGTATTTAGTAACTCCAGCATCAACACATCGTTGCCCAACCTTAGCTTAGACAATCCGGCTGTACCAAGGCAGACACTGGATCGTGGGAATACGGGCATTGTTTCTCCCATGCAAGATGGAAGGATTCATCACCAAGCTGTTAGCAATCAGCTAAACTATAATGACGATCTTATGCGGACAACTGGGCTGCAAAGGGGTCTCAGTGGTGGTCTAGATGACATTGTTGTTGACATGTTTAGGCCGGACCGCGAAGACGACGGCGTTCCTTACATCGATGGGGACTGGGAGCTGGTCTAGCCAGCCTCCATTTCAATCATTAGTCCGCGTACGAGGTTTTTCTGCATTCGCGGTGTCGGCTGCTGATTGGTCCATGCTCACTTGTCAGCACAAAGTGGTGTTCATAGTGGCTAGCCTTCATCACAAGTGCATTTCACATTTGGCTTCTTTTTTCAGCTTAGTGATTATTAGTTGGCCAGTCAGTCTGTGAAATTTATGTGGAGAAACGGCTATGTGGTGTGTTTTTAT]
[+] EMBL CB674693 [ATCCGCGATCCATCCATCATCCCCTACCTCTCGCTCTCTCTCTCCTCTCCTCTCCTCTTATTATCATCGCATCCATCCCGCACTTCTCTCTCTTTGGTGGTGGTGCTCGCTCTCGCTCACCCTGCTTTGACCTTTGGATTTTTATTTTTAAGGATCCAAGAAAGTGCTGTTTCTTGGGTTGCTTGGAGGTGGAGGAGTTTGGGAGATTGTTTGTGTTTGATTGATTGGTTGATTGATTGGAGGAAGATGACGGTGGAGGAGAGGCAGGGGAGGGTGGGAGGCCATGGTGTGAGCGGCGGCGGCGGCGGGAGAGACCAGTTCCCGGTCGGCATGCGGGTGCTCGCCGTCGACGACGACCCCACCTGCCTCAAGATCCTCGAGAACCTCCTGCTTCGATGCCAGTATCACGTGACAACAACTGGTCAGGCGGCCACGGCCCTGAAGCTGCTCAGGGAGAACAAGGACCAGTTTGACCTGGTGATCAGCGACGTCCACATGCCGGACATGGATGGCTTCAAACTCCTTGAGCTTGTCGGCCTCGAGATGGACCTCCCAGTCATTATGTTGTCTGCGAACGGGGAAACACAAACTGTCATGAAGGGTATAACCCATGGTGCATGTGACTATCTTCTGAAGCCAGTGCGTCTTGAGCAGCTAAGGACGATATGGCAACATGTGATTAGGCGTAAGAATTGTGATGCTAAGAACCGTGGTAACGATGATGACGCTGG ]
[+] EMBL AK100530 [ TGGTGGTGCTCGCTCTCGCTCACCCTGCTTTGACCTTTGGATTTTTATTTTTAAGGATCCAAGAAAGTGCTGTTTCTTGGGTTGCTTGGAGGTGGAGGAGTTTGGGAGATTGTTTGTGTTTGATTGATTGGTTGATTGATTGGAGGAAGATGACGGTGGAGGAGAGGCAGGGGAGGGTGGGAGGCCATGGTGTGAGCGGCGGCGGCGGCGGGAGAGACCAGTTCCCGGTCGGCATGCGGGTGCTCGCCGTCGACGACGACCCCACCTGCCTCAAGATCCTCGAGAACCTCCTGCTTCGATGCCAGTATCACGTGACAACAACTGGTCAGGCGGCCACGGCCCTGAAGCTGCTCAGGGAGAACAAGGACCAGTTTGACCTGGTGATCAGCGACGTCCACATGCCGGACATGGATGGCTTCAAACTCCTTGAGCTTGTCGGCCTCGAGATGGACCTCCCAGTCATTATGTTGTCTGCGAACGGGGAAACACAAACTGTCATGAAGGGTATAACCCATGGTGCATGTGACTATCTTCTGAAGCCAGTGCGTCTTGAGCAGCTAAGGACGATATGGCAACATGTGATTAGGCGTAAGAATTGTGATGCTAAGAACCGTGGTAACGATGATGACGCTGGTCAGAAGGCACAGGGAATGAACAATGAAGGTGAGAGTATTGGTGCTAACCGCAACAAGAGGCAGTCACGGAAAAGTAGAGATGAGAATGGAGATGATGGTGATGATTCTGATGAGAACAGTAATGAGAATGGAGACTCATCAACACAGAAGAAGCCAAGGGTCGTGTGGTCTGTTGAGCTGCACCGAAAGTTTGTGGCTGCTGTTAACCAGCTTGGCATCGAGAAGGCTGTTCCAAAGAAAATATTGGATCTCATGAATGTAGAGAACATCACCAGGGAGAATGTTGCTAGTCATTTGCAGAAGTATCGGCTGTACCTTAAACGGTTGAGCACTGATGCAAGCAGGCAGGCTAACCTTGCAGCTGCATTTGGAGGAAGGAACCCTGCTTACATAAACATGAATTCATTTGGAAACTACAACGCATATGGTAGATACCGTACAGTCCCAACTGCTGGCCATACCCAGGCAAACAACATTCTTACTAGGATGAACTCCCCTTCTGCGTTTGGTGTTCATGGTTTGCTGCATTCACAGCCAATTCAGTTAGGACATGCCCAAAATAATCTGAGCACTTCACTGAATGATTTAGGAGGGCTTAATAATGGTAACATGATCAGAGGTGCACAGATGTCAACAATTCTAACTGGTCCTTCTGGTAACTCCTTTCCAAACATATCGAATGGTGCACCGCTGGCAACTGCAAACAGATCACTGCAACCTCTTGAGTCGAGCAATCAGCAACACCTTAGTCGGGTGCATTCATCTTCTGCAGATCCATTTAGCACACTTGTTGGTGAGTCTCCCCAGTTTCCTGATCTTGGAAGAACCACCAATACTTGGCAAACTGCGGTTCCATCCAACATTCAGGATCGTGGTCACAATGATAACATGTCGCAAGCCACCCTGCATATGAATGGCCCCAAAATTGAACCTGTCTCAAGCTTCACATCATCCAATCAGATTCCGCTGCTGGGAAATGAGATGCAGGGCCAAGTAGCATCACTAGCTAGCAATGTTCCAATAGCATTCAATCAGGACACATCACCATTCAACTATGGAAGCAGCACAAACTCAAGAGACATGCTAAATAACAGCCATGTATTTAGTAACTCCAGCATCAACACATCGTTGCCCAACCTTAGCTTAGACAATCCGGCTGTACCAAGGCAGACACTGGATCGTGGGAATACGGGCATTGTTTCTCCCATGCAAGATGGAAGGATTCATCACCAAGCTGTTAGCAATCAGCTAAACTATAATGACGATCTTATGCGGACAACTGGGCTGCAAAGGGGTCTCAGTGGTGGTCTAGATGACATTGTTGTTGACATGTTTAGGCCGGACCGCGAAGACGACGGCGTTCCTTACATCGATGGGGACTGGGAGCTGGTCTAGCCAGCCTCCATTTCAATCATTAGTCCGCGTACGAGGTTTTTCTGCATTCGCGGTGTCGGCTGCTGATTGGTCCATGCTCACTTGTCAGCACAAAGTGGTGTTCATAGTGGCTAGCCTTCATCACAAGTGCATTTCACATTTGGCTTCTTTTTTCAGCTTAGTGATTATTAGTTGGCCAGTCAGTCTGTGAAATTTATGTGGAGAAACGGCTATGTGGTGTGTTTTTA ]
[+] EMBL CB653869 [ ACCCTGCTTTGACCTTTGGATTTTTATTTTTAAGGATCCAAGAAAGTGCTGTTTCTTGGGTTGCTTGGAGGTGGAGGAGTTTGGGAGATTGTTTGTGTTTGATTGATTGGTTGATTGATTGGAGGAAGATGACGGTGGAGGAGAGGCAGGGGAGGGTGGGAGGCCATGGTGTGAGCGGCGGCGGCGGCGGGAGAGACCAGTTCCCGGTCGGCATGCGGGTGCTCGCCGTCGACGACGACCCCACCTGCCTCAAGATCCTCGAGAACCTCCTGCTTCGATGCCAGTATCACGTGACAACAACTGGTCAGGCGGCCACGGCCCTGAAGCTGCTCAGGGAGAACAAGGACCAGTTTGACCTGGTGATCAGCGACGTCCACATGCCGGACATGGATGGCTTCAAACTCCTTGAGCTTGTCGGCCTCGAGATGGACCTCCCAGTCATTATGTTGTCTGCGAACGGGGAAACACAAACTGTCATGAAGGGTATAACCCATGGTGCATGTGACTATCTTCTGAAGCCAGTGCGTCTTGAGCAGCTAAGGACGATATGGCAACATGTGATTAGGCGTAAGAATTGTGATGCTAAGAACCGTGGTAACGATGATGACGCTGGTCAGAAGGCACAGGGAATGAACAATGAAGGTGAGAGTATTGGTGCTAACCGCAACAAGAGGCAGTCACGGAAAAGTAGAGATGAGAATGGAGATGATGGTGATGA ]
[+] EMBL CB630542 [ CGGCTGCTCGCCGTCGACGACGACCCCACCTGCCTCAAGATCCTCGAGAACCTCCTGCTTCGATGCCAGTATCACGTGACAACAACTGGTCAGGCGGCCACGGCCCTGAAGCTGCTCAGGGAGAACAAGGACCAGTTTGACCTGGTGATCAGCGACGTCCACATGCCGGACATGGATGGCTTCAAACTCCTTGAGCTTGTCGGCCTCGAGATGGACCTCCCAGTCATTATGTTGTCCGCGAACGGGGAAACACAAACTGTCATGAAGGGTATAACCCATGGTGCATGTGACTATCTTCTGAAGCCAGTGCGTCTTGAGCAGCTAAGGACGATATGGCAACATGTGATTAGGCGTAAGAATTGTGATGCTAAGAACCGTGGTAACGATGATGACGCTGGTCAGAAGGCACAGGGAATGAACAATGAAGGTGAGAGTATTGGTGCTAACCGCAACAAGAGGCAGTCACGGAAAAGTAGAGATGAGAATGGAGATGATGGTGATGATTCTGATGAGAACAGTAATGAGAATGGAGACTCATCAACACAGAAGAAGCCAAGGGTCGTGTGGTCTGTTGAGCTGCACCGAAAGTTTGTGGCTGCTGTTAACCAGCTTGGCATCGAGAAGGCTGTTCCAAAGAAAATATTGGATCTCATGAATGTAGAGAACATCACCAGGGAGAATGTTGCTAGTCATTTGCAGAAGTATCGGCTGTACCTTAAACGGTTGAGCACTGATGCAAGCAGGCAGGCTAACCTTGCAGCTGCATTTGGAGGAAGGAACCCTGCTTA ]
[+] EMBL BP184383 [ GCCATACCCAGGCAAACAACATTCTTACTAGGATGAACTCCCCTTCTGCGTTTGGTGTTCATGGTTTGCTGCATTCACAGCCAATTCAGTTAGGACATGCCCAAAATAATCTGAGCACTTCACTGAATGATTTAGGAGGGCTTAATAATGGTAACATGATCAGAGGTGCACAGATGTCAACAATTCTAACTGGTCCTTCTGGTAACTCCTTTCCAAACATATCGAATGGTGCACCGCTGGCAACTGCAAACAGATCACTGCAACCTCTTGAGTCGAGCAATCAGCAACACCTTAGTCGGGTGCATTCATCTTCTGCAGATCCATTTAGCACACTTGTTGGTGAGTCTCCCCAGTTTCCTGATCTTGGAAGAACCACCAATACTTGGCAAACTGCGGTTCCATCCAACATTCAGGATCGTGGTCACAATGATAACATGTCGCAAGCCACCCTGCATATGAATGGCCCCAAAATTGAACCTGTCTCAAGCTTCACATCATCCAATCAGATTCCGCTGCTGGGAAATGAGATGCAGGGCCAAGTAGCATCACTAGCTAGCAATGTTCCAATAGCATTCAATCAGGACACATCACCATTCAACTATGGAAGCAGCACAAACTCAAGAGACATGCTAAATAACAGCCATGTATTTAGTAACTCCAGCATCAACACATCGTTGCCCAACCTTAGCTTAGACAATCCGGCTGTACCAAGGCAGACACTGGATCGTGGGAATACGGGCATTGTTTCTCCCATGCAAGATGGAAGGATTCATCACCAAGCTGTTAGCAATCAGCTAAACTATAATGACGATCTTATGCGGACAACTGGGCTGCAAAGGGGTCTCAGTGGTGGTCTAGATGACATTGTTGTTGACATGTTTAGGCCGGACCGCGAAGACGACGGCGTTCCTTACATCGATGGGGACTGGGAGCTGGTCTAGCCAGCCTCCATTTCAATCATTAGTCCGCGTACGAGGTTTTTCTGCATTCGCGGTGTCGGCTGCTGATTGGTCCATGCTCACTTGTCAGCACAAAGTGGTGTTCATAGTGGCTAGCCTTCATCACAAGTGCATTTCACATTTGGCTTCTTTTTTCAGCTTAGTGATTATTAGTTGGCCAGTCAGTCTGTGAAATTTATGTGGAGAAACGGCTATGTGGTGTGTTTTTA ]
[-] EMBL CB622476 [ cGGCCCCAAAATTGAACCTGTCTCAAGCTTCACATCATCCAATCAGATTCCGCTGCTGGGAAATGAGATGCAGGGCCAAGTAGCATCACTAGCTAGCAATGTTCCAATAGCATTCAATCAGGACACATCACCATTCAACTATGGAAGCAGCACAAACTCAAGAGACATGCTAAATAACAGCCATGTATTTAGTAACTCCAGCATCAACACATCGTTGCCCAACCTTAGCTTAGACAATCCGGCTGTACCAAAGCAGACACTGGATCGTGGGAATACGGGCATTGTTTCTCCCATGCAAGATGGAAGGATTCATCACCAAGCTGTTAGCAATCAGCTAAACTATAATGACGATCTTATGCGGACAACTGGGCTGCAAAGGGGTCTCAGTGGTGGTCTAGATGACATTGTTGTTGACATGTTTAGGCCGGACCGCGAAGACAACGGCGTTCCTTACATCGATGGGGACTGGGAGCTGGTCTAGCCAACCTCCATTTCAATCATTAGTCCGCGTACGAGGTTTTTCTGCATTCGCGGTGTCGGCTGCTGATTGGTCCATGCTCACTTGTCAGCACAAAGTGGTGTTCATAGTGGCTAGCCTTCATCACAAGTGCATTTCACATTTGGCTTCTTTTTTCAGCTTAGTGATTATTAGTTGGCCAGTCAGTCTGTGAAATTTATGTGGAGAAACGGCTATGTGGTGTGTTTTTAT]
[-] EMBL CB653870 [ ATTGAACCTGTCTCAAGCTTCACATCATCCAATCAGATTCCGCTGCTGGGAAATGAGATGCAGGGCCAAGTAGCATCACTAGCTAGCAATGTTCCAATAGCATTCAATCAGGACACATCACCATTCAACTATGGAAGCAGCACAAACTCAAGAGACATGCTAAATAACAGCCATGTATTTAGTAACTCCAGCATCAACACATCGTTGCCCAACCTTAGCTTAGACAATCCGGCTGTACCAAGGCAGACACTGGATCGTGGGAATACGGGCATTGTTTCTCCCATGCAAGATGGAAGGATTCATCACCAAGCTGTTAGCAATCAGCTAAACTATAATGACGATCTTATGCGGACAACTGGGCTGCAAAGGGGTCTCAGTGGTGGTCTAGATGACATTGTTGTTGACATGTTTAGGCCGGACCGCGAAGACGACGGCGTTCCTTACATCGATGGGGACTGGGAGCTGGTCTAGCCAGCCTCCATTTCAATCATTAGTCCGCGTACGAGGTTTTTCTGCATTCGCGGTGTCGGCTGCTGATTGGTCCATGCTCACTTGTCAGCACAAAGTGGTGTTCATAGTGGCTAGCCTTCATCACAAGTGCATTTCACATTTGGCTTCTTTTTTCAGCTTAGTGATTATTAGTTGGCCAGTCAGTCTGTGAAATTTATGTGGAGAAACGGCTATGTGGTGTGTTTTTAT]
[-] EMBL CB630543 [ AACCTGTCTCAAGCTTCACATCATCCAATCAGATTCCGCTGCTGGGAAATGAGATGCAGGGCCAAGTAGCATCACTAGCTAGCAATGTTCCAATAGCATTCAATCAGGACACATCACCATTCAACTATGGAAGCAGCACAAACTCAAGAGACATGCTAAATAACAGCCATGTATTTAGTAACTCCAGCATCAACACATCGTTGCCCAACCTTAGCTTAGACAATCCGGCTGTACCAAAGCAGACACTGGATCGTGGGAATACGGGCATTGTTTCTCCCATGCAAGATGGAAGGATTCATCACCAAGCTGTTAGCAATCAGCTAAACTATAATGACGATCTTATGCGGACAACTGGGCTGCAAAGGGGTCTCAGTGGTGGTCTAGATGACATTGTTGTTGACATGTTTAGGCCGGACCGCGAAGACGACGGCGTTCCTTACATCGATGGGGACTGGGAGCTGGTCTAGCCAGCCTCCATTTCAATCATTAGTCCGCGTACGAGGTTTTTCTGCATTCGCGGTGTCGGCTGCTGATTGGTCCATGCTCACTTGTCAGCACAAAGTGGTGTTCATAGTGGCTAGCCTTCATCACAAGTGCATTTCCCATTTGGCTTCTTTTTTCAGCTTAGTGATTATTAGTTGGCCAGTCAGT T TGAAATTTATGTGGAGAAACGGCTATGTGGTGTGTTTTTAT]
[-] EMBL CB674694 [ ATCATCCAATCAGATTCCGCTGCTGGGAAATGAGATGCAGGGCCAAGTAGCATCACTAGCTAGCAATGTTCCAATAGCATTCAATCAGGACACATCACCATTCAACTATGGAAGCAGCACAAACTCAAGAGACATGCTAAATAACAGCCATGTATTTAGTAACTCCAGCATCAACACATCGTTGCCCAACCTTAGCTTAGACAATCCGGCTGTACCAAGGCAGACACTGGATCGTGGGAATACGGGCATTGTTTCTCCCATGCAAGATGGAAGGATTCATCACCAAGCTGTTAGCAATCAGCTAAACTATAATGACGATCTTATGCGGACAACTGGGCTGCAAAGGGGTCTCAGTGGTGGTCTAGATGACATTGTTGTTGACATGTTTAGGCCGGACCGCGAAGACGACGGCGTTCCTTACATCGATGGGGACTGGGAGCTGGTCTAGCCAGCCTCCATTTCAATCATTAGTCCGCGTACGAGGTTTTTCTGCATTCGCGGTGTCGGCTGCTGATTGGTCCATGCTCACTTGTCAGCACAAAGTGGTGTTCATAGTGGCTAGCCTTCATCACAAGTGCATTTCACATTTGGCTTCTTTTTTCAGCTTAGTGATTATTAGTTGGCCAGTCAGTCTGTGAAATTTATGTGGAGAAACGGCTATGTGGTGTGTTTTTAT]
[+] EMBL AA750486 [ CTGTTAGCAATCAGCTAAACTATAATGACGATCTTATGCGGACAACTGGGCTGCAAAGGGGTCTCAGTGGTGGTCTAGATGACATTGTTGTTGACATGTTTAGGCCGGACCGCGAAGACGACGGCGTTCCTTACATCGATGGGGACTGGGAGCTGGTCTAGCCAGCCTCCATTTCAATCATTAGTCCGCGTACGAGGTTTTTCTGCATTCGCGGTGTCGGCTGC ]
[-] EMBL AU225239 [ GTCCGCGTACGAGGTTTTTCTGCATTCGCGGTGTCGGCTGCTGATTGGTCCATGCTCACTTGTCAGCACAAAGTGGTGTTCATAGTGGCTAGCCTTCATCACAAGTGCATTTCACATTTGGCTTCTTTTTTCAGCTTAGTGATTATTAGTTGGCCAGTCAGTCTGTGAAATTTATGTGGAGAAACGGCTATGTGGTGTGTTTTTAT]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||