cluster # 12925

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Oryza sativa
cluster # 12925 cluster # 12925 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12925#0 length = 2190 sequences # 9

consensus_12925#1 length = 154 sequences # 2

consensusID : consensus_12925#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2190
fasta sequence

                              [CGGGAGCCGCGGGCGTAGCTCGCGGCTGGAGCGCCGCAACGCGGTGAAGCACATCGACTACGAGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGTCGTCCGTGCCGGCGTGCGCGTCGTGGTCGTCGTCCATGTCGGCGGACCGGTCGCTGGGGCTCCGGCCGTCGCGCTCGCTCGACCTGGCCGTCGGGGGCGGCGGCACGGACATCCGCATCAGCGGCAGCGTGGAGGGGGAGGTCGACGAGCTGTGCCGCAGCCTGGGTTTATCGGGGCCGGAGGAGTTCGCGATCCCCGTCGCCGCATGGGAAGCCCGGAAAGAGCGTTCTAACTCCGACCTACTACCGCGCTCCAGCTTCGTCTCCTCGCCACCCGTCGACGACCCCTCTCCCATGGCCCGCACCATTTCCGCCCCCGAGGTCATCCAGTGCGACCTTCCTCCCTCATTCCCTGCTTCAATTCCTGAGGAGTCCCTCAATTCTTCCTCCAATTCCACCGCAACTGATTCGGCGGAGGAGCCTACCGCTGCGGCGCTCGGTCAGGAATCCCCCAAGGCTGCCCCTGCCGTTGCTGCTGTGGCACCCCTCGCTGGATTGCCCCTGCTATCGCCAAAGAGAGGAGGCGGCGAAGTCGGTATCCGAGGAGCCCGACCTCCTGTGCTCTCCCCGCCTCAGCCGCTCATGGCACTCGCACCGCCGCCAATGAGGCGTTCAATTGTGGCTAAAGACATGAGCGGGGTGTCGGCTTGGGATATTGTGAACTCGTTTGCTCCCAGTGAAGAGAAAAGTGAAGTGAGAACAGATGATGAACGCGTGGACGCGTCTCACATGTCGGACACCGAGGAGGAGGAGGAGTTTGCTGACGAGGGAGTGGCAGGGGTGGACGGGGAGCTGAAAGAGTTAAGGATAGGAGAGACCTTTGAAGGGTTCACTGGGACATCATCATTGTCAACAACAAATGATGATGATGCATCCAGCACAACTACGGAGGCTATGTTCATCATCTCACCAAATGGAAAGTTCAAGAGGAAGATTAAGTCGTGGATGCGTGGTGCTCTTCTGGGGAGCGGCTCATTTGGGATGGTGTATGAGGGCATCAGTGATGAAGGAGCGTTTTTTGCTGTGAAGGAAGTATCTTTGCTTGACCAAGGAAGCAACGCACAACAATCTATTCTTGCACTTGAACAGGAAATTGCACTCCTAAGTCAGTTTGAACATGAAAATATAGTCCAGTATTATGGAACTGACAAGGAAGAATCAAAACTGTACATTTTTATTGAGCTTGTTACACAAGGTTCTCTATCGTCCCTCTATCAAAAGTATAAACTACGAGACTCACAAGTGTCAGCATACACAAGGCAGATTCTCAACGGATTGGTTTATCTCCATGAGCGAAATGTGGTTCACAGAGACATTAAATGCGCAAATATACTGGTTCATGCAAATGGATCAGTAAAATTGGCAGACTTTGGGTTGGCGAAGGAGATGTCAAAAATTAACATGCTGAGATCATGCAAAGGAAGTGTTTATTGGATGGCACCTGAGGTTGTTAATCCTAAAAAAACATATGGGCCCCAGGCTGATATTTGGAGTCTTGGCTGCACTGTATTGGAAATGCTTACTCGTAACATACCATATCCTAATGTGGAGTGGACAAATGCTTTTTTTATGATTGGAAAAGGAGAACGACCTCAAATTCCCAGCTATTTGTCAAAAGATGCTCAAGATTTCATTAG-CCAGTGTGTACAAGTTGAT-CCAGAGCAACGGCCTTCTGC-ATCACAACTT--AT-GTCACACCCAT-TTGTTAAT-AGACCGCTTCGAGCTTCTTT-T-GAATCTGCAT-CCCCTCCTGCCATCAGCTCGT-ATTGATTGTGGCATGCTTCTGTTT-TTGAGAACATTGCT-GAGCTCATGAACAAATCT-TCGTGGTTCCCACTCAGTGCCAGAAAGGAACTT--CTT-GGGCTTGTTTAGGATATAGTTTAGCATTTTAGTCAGTTAGGACTAGTGAGATAAGCA-TTACCTT-GCTGCGTCGGTCTGGGAATATTT-GAGTGTTTTCTTGTTGAAGACATTCAGTAGATTTTGTACGACCTGGTAGGGGGGAGATGGAATT-GCTTGCAATGTATTTGAGCTTAAGCCATTGTAAATTTTTGACTTCATCATTATTTTGGTTTGTTGCTCCTGAAGCACTCAGCTA--AAAAAAAAAA]

[+] EMBL AK100023             [CGGGAGCCGCGGGCGTAGCTCGCGGCTGGAGCGCCGCAACGCGGTGAAGCACATCGACTACGAGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGTCGTCCGTGCCGGCGTGCGCGTCGTGGTCGTCGTCCATGTCGGCGGACCGGTCGCTGGGGCTCCGGCCGTCGCGCTCGCTCGACCTGGCCGTCGGGGGCGGCGGCACGGACATCCGCATCAGCGGCAGCGTGGAGGGGGAGGTCGACGAGCTGTGCCGCAGCCTGGGTTTATCGGGGCCGGAGGAGTTCGCGATCCCCGTCGCCGCATGGGAAGCCCGGAAAGAGCGTTCTAACTCCGACCTACTACCGCGCTCCAGCTTCGTCTCCTCGCCACCCGTCGACGACCCCTCTCCCATGGCCCGCACCATTTCCGCCCCCGAGGTCATCCAGTGCGACCTTCCTCCCTCATTCCCTGCTTCAATTCCTGAGGAGTCCCTCAATTCTTCCTCCAATTCCACCGCAACTGATTCGGCGGAGGAGCCTACCGCTGCGGCGCTCGGTCAGGAATCCCCCAAGGCTGCCCCTGCCGTTGCTGCTGTGGCACCCCTCGCTGGATTGCCCCTGCTATCGCCAAAGAGAGGAGGCGGCGAAGTCGGTATCCGAGGAGCCCGACCTCCTGTGCTCTCCCCGCCTCAGCCGCTCATGGCACTCGCACCGCCGCCAATGAGGCGTTCAATTGTGGCTAAAGACATGAGCGGGGTGTCGGCTTGGGATATTGTGAACTCGTTTGCTCCCAGTGAAGAGAAAAGTGAAGTGAGAACAGATGATGAACGCGTGGACGCGTCTCACATGTCGGACACCGAGGAGGAGGAGGAGTTTGCTGACGAGGGAGTGGCAGGGGTGGACGGGGAGCTGAAAGAGTTAAGGATAGGAGAGACCTTTGAAGGGTTCACTGGGACATCATCATTGTCAACAACAAATGATGATGATGCATCCAGCACAACTACGGAGGCTATGTTCATCATCTCACCAAATGGAAAGTTCAAGAGGAAGATTAAGTCGTGGATGCGTGGTGCTCTTCTGGGGAGCGGCTCATTTGGGATGGTGTATGAGGGCATCAGTGATGAAGGAGCGTTTTTTGCTGTGAAGGAAGTATCTTTGCTTGACCAAGGAAGCAACGCACAACAATCTATTCTTGCACTTGAACAGGAAATTGCACTCCTAAGTCAGTTTGAACATGAAAATATAGTCCAGTATTATGGAACTGACAAGGAAGAATCAAAACTGTACATTTTTATTGAGCTTGTTACACAAGGTTCTCTATCGTCCCTCTATCAAAAGTATAAACTACGAGACTCACAAGTGTCAGCATACACAAGGCAGATTCTCAACGGATTGGTTTATCTCCATGAGCGAAATGTGGTTCACAGAGACATTAAATGCGCAAATATACTGGTTCATGCAAATGGATCAGTAAAATTGGCAGACTTTGGGTTGGCGAAGGAGATGTCAAAAATTAACATGCTGAGATCATGCAAAGGAAGTGTTTATTGGATGGCACCTGAGGTTGTTAATCCTAAAAAAACATATGGGCCCCAGGCTGATATTTGGAGTCTTGGCTGCACTGTATTGGAAATGCTTACTCGTAACATACCATATCCTAATGTGGAGTGGACAAATGCTTTTTTTATGATTGGAAAAGGAGAACGACCTCAAATTCCCAGCTATTTGTCAAAAGATGCTCAAGATTTCATTAG CCAGTGTGTACAAGTTGAT CCAGAGCAACGGCCTTCTGC ATCACAACTT  AT GTCACACCCTT TTGTTAAT AGACCGCTTCGAGCTTCTTT T GAATCTGCAT CCCCTCCTGCCATCAGCTCGT ATTGATTGTGGCATGCTTCTGTTT TTGAGAACATTGCT GAGCTCATGAACAAATCT TCGTGGTTCCCACTCAGTGCCAGAAAGGAACTT  CTT GGGCTTGTTTAGGATATAGTTTAGCATTTTAGTCAGTTAGGACTAGTGAGATAAGCA TTACCTT GCTGCGTCGGTCTGGGAATATTT GAGTGTTTTCTTGTTGAAGACATTCAGTAGATTTTGTACGACCTGGTAGGGGGGAGATGGAATT GCTTGCAATGTATTTGAGCTTAAGCCATTGTAAATTTTTGACTTCATCATTATTTTGGTTTGTTGCTCCTGAA                       ]
[+] EMBL CB630341             [                                                                                                                                                                                                                                                                                                                                       CTCCGACCTACTACCGCGCTCCCGCTTCGTCTCCTCGCCACCCGTCGACGACCCCTCTCCCATGGCCCGCACCATTTCCGCCCCCGAGGTCATCCAGTGCGACCTTCCTCCCTCATTCCCTGCTTCAATTCCTGAGGAGTCCCTCAATTCTTCCTCCAATTCCACCGCAACTGATTCGGCGGAGGAGCCTACCGCTGCGGCGCTCGGTCAGGAATCCCCCAAGGCTGCCCCTGCCGTTGCTGCTGTGGAACCCCTCGCTGGATTGCCCCTGCTATCGCCAAAGAGAGGAGGCGGCGAAGTCGGTATCCGAGGAGCCCGACCTCCTGTGCTCTCCCCGCCTCAGCCGCTCATGGCACTCGCACCGCCGCCAATGAGGCGTTCAATTGTGGCTAAAGACATGAGCGGGGTGTCGGCTTGGGATATTGTGAACTCGTTTGCTCCCAGTGAAGAGAAAAGTGAAGTGAGAACAGATGATGAACGCGTGGACGCGTCTCACATGTCGGACACC   GAGGAGGAGGAGTTTGCTGACGAGGGAGTGGCAGGGGTGGACGGGGAGCTGAAAGAGTTAAGGATAGGAGAGACCTTTGAAGGGTTCACTGGGACATCATCATTGTCAACAACAAATGATGATGATGCATCCAGCACAACTACGGAGGCTATGTTCATCATCTCACCAAATGGAAAGTTCAAGAGGAAGATTAAGTCGTGGATGCGTGGTGCTCTTCTGGGGAGCGGCTCATTTGGGATGGTGTATGAGGGCATCAGTGATGAAGGAGCGTTTTTTGCTGTGAAGGAAGTATCTTTGCTTGACCAAGGAAGCAACGCACAACAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB648964             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGAACCCGTGGACGCGTCTCACATGTCGGACACCGAGGAGGAGGAGGAGTTTGCTGACGAGGGAGTGGCAGGGGTGGACGGGGAGCTGAAAGAGTTAAGGATAGGAGAGACCTTTGAAGGGTTCACTGGGACATCATCATTGTCAACAACAAATGATGATGATGCATCCAGCACAACTACGGAGGCTATGTTCATCATCTCACCAAATGGAAAGTTCAAGAGGAAGATTAAGTCGTGGATGCGTGGTGCTCTTCTGGGGAGCGGCTCATTTGGGATGGTGTATGAGGGCATCAGTGATGAAGGAGCGTTTTTTGCTGTGAAGGAAGTATCTTTGCTTGACCAAGGAAGCAACGCACAACAATCTATTCTTGCACTTGAACAGGAAATTGCACTCCTAAGTCAGTTTGAACATGAAAATATAGTCCAGTATTATGGAACTGACAAGGAAGAATCAAAACTGTACATTTTTATTGAGCTTGTTACACAAGGTTCTCTATCGTCCCTCTATCAAAAGTATAAACTACGAGACTCACAAGTGTCAGCATACACAAGGCAGATTCTCAACGGATTGGTTTATCTCCATGAGCGAAATGTGGTTCACAGAGACATTAAATGCGCAAATATACTGGTTCATGCAAATGGATCAGTAAAATTGGCAGACTTTGGGTTGGCGAAGGAGATGTCAAAAATTAACATGCTGAGATCATGCAAAGGAAGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB630342             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AATGGATCAGTAAAATTGGCAGACTTTGGGTTGGCGAAGGAGATGTCAAAAATTAACATGCTGAGATCATGCAAAGGAAGTGTTTATTGGATGGCACCTGAGGTTGTTAATCCT AAAAAACATATGGGCCCCAGGCTGATATTTGGAGTCTTGGCTGCACTGTATTGGAAATGCTTACTCGTAACATACCATATCCTAATGTGGAGTGGACAAATGCTTTTTTTATGATTGGAAAAGGAGAACGACCTCAAATTCCCAGCTATTTGTCAAAAGATGCTCAAGATTTCATTAG CCAGTGTGTACAAGTTGAT CCAGAGCAACGGCCTTTTGC ATCACAACTT  AT GTCACACCCAT TTGTTAAT AGACCGCTTCGAGCTTCTTT T GAATCTGCAT CCCCTCCTGCCATCAGCTCGT ATTGATTGTGGCATGCTTCTGTTT TTGAGAACATTGCT GAGCTCATGAACAAATCT TCGTGGTTCCCACTCAGTGCCAGAAAGGAACTT  CTT GGGCTTGTTTAGGATATAGTTTAGCATTTTAGTCAGTTAGGACTAGTGAGATAAGCA TTACCTT GCTGCGTCGGTCTGGGAATATTT GAGTGTTTTCTTGTTGAAGACATTCAGTAGATTTTGTACGACCTGGTAGGGGGGAGATGGAATT GCTTGCAATGTATTTGAGCTTAAGCCATTGTAAATTTTTGACTTCATCATTATTTTGGTTTGTTGCTCCTGAAGCA                    ]
[+] EMBL BI806599             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               atctAAAACCT T  GCCCC  GCT ATATT  GA TCT  GCTGC CTGTA TGG AATGC TACTCGTAACATACCATATCCTAATGTGGAGTGGACCCAT C TTTTTTATGATTGGAAAAGGAG ACGA CTC AATTCCCANCTATTTGTC AAAGATGCTCAAGATTTCATTA  CCAGTGTGTACAA TTGAT CCAGAGCAACGCCCTTCTGC ATCAC ACTT  AT GTCACACCCAT TTGTTAAT AGACCGCTTCGAGCTTCTTT T GAATCTGCAT CCCCTCCTGCCATCAGCTCGT ATTGATTGT GCATGCTTCTGTTT TTGAGAACATTGCT GAGCTCATGAAC AATCT TCGTGGTTCCCACTCAGTGCCAGAAAGGAACTT  CTT GGGCTTGTTTAGGATATAGTTTA CATTTTAGTCAGTTAGGACTAGTGAGATAAGCA TTACCTT GCTGCGTCGGTCTGGGAATATTT GAGTGTTTTCTTGTTGAAGACATTCAGTAGATTTTGTACGACCTGGTAGGGGGGAGATGGAATT GCTTGC ATGTATTTGAGCTTAA CC TTGTAAATTTTTGACTTCATCATTATTTTGGTTTGTTGCTCCTGAA CACTCAGCTAGCAAAAAAAAAA]
[-] EMBL CB238399             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGAC AATGCTTTTTTTATGATTGGAAAAGGAGAACGACCTCAAATTCCCAGCTATTTGTC AAAGATGCTCAAGATTTCATTAGCCCAGTGTGTACAAGTTGAT CCAGAAC ACGGCCTTCTGC ATCACAACTT  AT GTCACACCCAT TTGTTAAT AG                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BI811293             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACAAGTGGATGCCAGAGC ACGG CTTCTGCAATCACAACGTGGATGGTCACACCCATGTTGTTAATGAGACCGCGTCGAGCTTCTTTGTGGAATCCGCATCCCCCTCCTGCCATCAGCTCGTGATTGATTGTGCCATGCTTCTGTTTGTTGAGAACATTGCT GAGCTCATGAACCAATCTGTCGTGGTTCCCACTCAGTGCCAGAAAGGAACTT  CTT GGGCTTGTTTAGGATATAGTTTA CATTTTAGTCAGTTAGGACTAGTGAGATAAGCA TTACCTTGGCTGCGTCGGTCTGGGAATATTTGGAGTGTTTTCTTGTTGAAGACATTCAGTAGATTTTGTACGACCTGGTAGGGGGGAGATGGAATTGGCTT C ATGTATTTGAGCTTAA                                                                         ]
[-] EMBL CB638756             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         aTGCCATCAGCTAGT ATTGATTGTGGCATGCTTCTGTTT TTGAGGACATTGGTGGAGGTCATGAACAAATCG TCGTGGTTCCCAGTCAGGGCCAGAAAGGAACTT  CTT GGGATTATTTAGGATATAGTTTAGCATTTTAGTCAGTTAGGAATAGTAAGATAAGCA TTACCTT GCTGCGTCGGTCTGGGAATATTT GAGTGTTTTCTTGTTGAAGACATTCAGTAGATTTTGTACGACCTGGTAGGGGGGAGATGGAATT GCTTGCAATGTATTTGAGCTT                                                                           ]
[+] EMBL BI812425             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACTTCCCTTGGGGCTTGTTTAGGATATAGTTTAGCATTTTAGTCAGTTAGGACTAGTGAGATAAGCACTTACCTT GCTGCGTCGGTCTGGGAATATTT GAGTGTTTTCTTGTTGAAGACATTCAGTAGATTTTGTACGACCTGGTAGGGGGGAGATGGAATT GCTTGC ATGTATTTGAGCTTAAGCCATTGTAAATTTTTGACTTCATCATTATTTTGGTTTGTTGCTCCTGAAGCACTCAGCTA  AAAAAAAA  ]




>consensus_12925#0
CGGGAGCCGCGGGCGTAGCTCGCGGCTGGAGCGCCGCAACGCGGTGAAGCACATCGACTA
CGAGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGTCGTCCGTGCCGGCGTGCGCGTCGTG
GTCGTCGTCCATGTCGGCGGACCGGTCGCTGGGGCTCCGGCCGTCGCGCTCGCTCGACCT
GGCCGTCGGGGGCGGCGGCACGGACATCCGCATCAGCGGCAGCGTGGAGGGGGAGGTCGA
CGAGCTGTGCCGCAGCCTGGGTTTATCGGGGCCGGAGGAGTTCGCGATCCCCGTCGCCGC
ATGGGAAGCCCGGAAAGAGCGTTCTAACTCCGACCTACTACCGCGCTCCAGCTTCGTCTC
CTCGCCACCCGTCGACGACCCCTCTCCCATGGCCCGCACCATTTCCGCCCCCGAGGTCAT
CCAGTGCGACCTTCCTCCCTCATTCCCTGCTTCAATTCCTGAGGAGTCCCTCAATTCTTC
CTCCAATTCCACCGCAACTGATTCGGCGGAGGAGCCTACCGCTGCGGCGCTCGGTCAGGA
ATCCCCCAAGGCTGCCCCTGCCGTTGCTGCTGTGGCACCCCTCGCTGGATTGCCCCTGCT
ATCGCCAAAGAGAGGAGGCGGCGAAGTCGGTATCCGAGGAGCCCGACCTCCTGTGCTCTC
CCCGCCTCAGCCGCTCATGGCACTCGCACCGCCGCCAATGAGGCGTTCAATTGTGGCTAA
AGACATGAGCGGGGTGTCGGCTTGGGATATTGTGAACTCGTTTGCTCCCAGTGAAGAGAA
AAGTGAAGTGAGAACAGATGATGAACGCGTGGACGCGTCTCACATGTCGGACACCGAGGA
GGAGGAGGAGTTTGCTGACGAGGGAGTGGCAGGGGTGGACGGGGAGCTGAAAGAGTTAAG
GATAGGAGAGACCTTTGAAGGGTTCACTGGGACATCATCATTGTCAACAACAAATGATGA
TGATGCATCCAGCACAACTACGGAGGCTATGTTCATCATCTCACCAAATGGAAAGTTCAA
GAGGAAGATTAAGTCGTGGATGCGTGGTGCTCTTCTGGGGAGCGGCTCATTTGGGATGGT
GTATGAGGGCATCAGTGATGAAGGAGCGTTTTTTGCTGTGAAGGAAGTATCTTTGCTTGA
CCAAGGAAGCAACGCACAACAATCTATTCTTGCACTTGAACAGGAAATTGCACTCCTAAG
TCAGTTTGAACATGAAAATATAGTCCAGTATTATGGAACTGACAAGGAAGAATCAAAACT
GTACATTTTTATTGAGCTTGTTACACAAGGTTCTCTATCGTCCCTCTATCAAAAGTATAA
ACTACGAGACTCACAAGTGTCAGCATACACAAGGCAGATTCTCAACGGATTGGTTTATCT
CCATGAGCGAAATGTGGTTCACAGAGACATTAAATGCGCAAATATACTGGTTCATGCAAA
TGGATCAGTAAAATTGGCAGACTTTGGGTTGGCGAAGGAGATGTCAAAAATTAACATGCT
GAGATCATGCAAAGGAAGTGTTTATTGGATGGCACCTGAGGTTGTTAATCCTAAAAAAAC
ATATGGGCCCCAGGCTGATATTTGGAGTCTTGGCTGCACTGTATTGGAAATGCTTACTCG
TAACATACCATATCCTAATGTGGAGTGGACAAATGCTTTTTTTATGATTGGAAAAGGAGA
ACGACCTCAAATTCCCAGCTATTTGTCAAAAGATGCTCAAGATTTCATTAGCCAGTGTGT
ACAAGTTGATCCAGAGCAACGGCCTTCTGCATCACAACTTATGTCACACCCATTTGTTAA
TAGACCGCTTCGAGCTTCTTTTGAATCTGCATCCCCTCCTGCCATCAGCTCGTATTGATT
GTGGCATGCTTCTGTTTTTGAGAACATTGCTGAGCTCATGAACAAATCTTCGTGGTTCCC
ACTCAGTGCCAGAAAGGAACTTCTTGGGCTTGTTTAGGATATAGTTTAGCATTTTAGTCA
GTTAGGACTAGTGAGATAAGCATTACCTTGCTGCGTCGGTCTGGGAATATTTGAGTGTTT
TCTTGTTGAAGACATTCAGTAGATTTTGTACGACCTGGTAGGGGGGAGATGGAATTGCTT
GCAATGTATTTGAGCTTAAGCCATTGTAAATTTTTGACTTCATCATTATTTTGGTTTGTT
GCTCCTGAAGCACTCAGCTAAAAAAAAAAA

consensusID : consensus_12925#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 154
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCTAGCTGAGTGCTTCAGGAGCAACAAACCAAAATAATGATGAAGTCAAAAATTTACAATGGCTTAAGCTCAAATACATTGCAAGCAATTCCAACTCCCTCAGTCCATG]

[-] EMBL CF320104             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCTAGCTGAGTGCTTCAGGAGCAACAAACCAAAATAATGATGAAGTCAAAAATTTACAATGGCTTAAGCTCAAATACATTGCAAGCAATTCCAACTCCCTCAGTCCATG]
[+] EMBL CF320103             [    TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTCTAGCTGAGGGCTTCAGGACCCACAAACCAAATTAATGATGAAGTCAAAAATTTACAATGGCTTAAGCTCAAATACATTGCAAGCAATTCCAACTCCCTTATTCCAT ]




>consensus_12925#1
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCTAGCTGAGTGCTT
CAGGAGCAACAAACCAAAATAATGATGAAGTCAAAAATTTACAATGGCTTAAGCTCAAAT
ACATTGCAAGCAATTCCAACTCCCTCAGTCCATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12925#0      CGGGAGCCGCGGGCGTAGCTCGCGGCTGGAGCGCCGCAACGCGGTGAAGCACATCGACTA 60
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      CGAGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGTCGTCCGTGCCGGCGTGCGCGTCGTG 120
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      GTCGTCGTCCATGTCGGCGGACCGGTCGCTGGGGCTCCGGCCGTCGCGCTCGCTCGACCT 180
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      GGCCGTCGGGGGCGGCGGCACGGACATCCGCATCAGCGGCAGCGTGGAGGGGGAGGTCGA 240
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      CGAGCTGTGCCGCAGCCTGGGTTTATCGGGGCCGGAGGAGTTCGCGATCCCCGTCGCCGC 300
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      ATGGGAAGCCCGGAAAGAGCGTTCTAACTCCGACCTACTACCGCGCTCCAGCTTCGTCTC 360
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      CTCGCCACCCGTCGACGACCCCTCTCCCATGGCCCGCACCATTTCCGCCCCCGAGGTCAT 420
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      CCAGTGCGACCTTCCTCCCTCATTCCCTGCTTCAATTCCTGAGGAGTCCCTCAATTCTTC 480
consensus_12925#1      ----------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38
                                             **   *  **   **  *      *   *   ** ** 

consensus_12925#0      CTCCAATTCCACCGCAACTGATTCGGCGGAGGAGCCTACCGCTGCGGCGCTCG-GTCAGG 539
consensus_12925#1      TTTTAATTCTAGC-TGAGTGCTTCA--GGAGCAACAAACCAAAATAATGATGAAGTCAAA 95
                        *  ***** * *   * ** ***   **** * *  ***        * *   ****  

consensus_12925#0      AATCCCCCAAGGCTGCCCCTGCCGTTGCTGCTGTGGCACCCCTCGCTGGATT-GCCCCTG 598
consensus_12925#1      AATTTACAATGGCTTAAGCT-CAAATACATTGCAAGCAATTCCAACTCCCTCAGTCCATG 154
                       ***   * * ****    ** *   * *       ***   *   **   *  * ** **

consensus_12925#0      CTATCGCCAAAGAGAGGAGGCGGCGAAGTCGGTATCCGAGGAGCCCGACCTCCTGTGCTC 658
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      TCCCCGCCTCAGCCGCTCATGGCACTCGCACCGCCGCCAATGAGGCGTTCAATTGTGGCT 718
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      AAAGACATGAGCGGGGTGTCGGCTTGGGATATTGTGAACTCGTTTGCTCCCAGTGAAGAG 778
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      AAAAGTGAAGTGAGAACAGATGATGAACGCGTGGACGCGTCTCACATGTCGGACACCGAG 838
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      GAGGAGGAGGAGTTTGCTGACGAGGGAGTGGCAGGGGTGGACGGGGAGCTGAAAGAGTTA 898
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      AGGATAGGAGAGACCTTTGAAGGGTTCACTGGGACATCATCATTGTCAACAACAAATGAT 958
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      GATGATGCATCCAGCACAACTACGGAGGCTATGTTCATCATCTCACCAAATGGAAAGTTC 1018
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      AAGAGGAAGATTAAGTCGTGGATGCGTGGTGCTCTTCTGGGGAGCGGCTCATTTGGGATG 1078
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      GTGTATGAGGGCATCAGTGATGAAGGAGCGTTTTTTGCTGTGAAGGAAGTATCTTTGCTT 1138
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      GACCAAGGAAGCAACGCACAACAATCTATTCTTGCACTTGAACAGGAAATTGCACTCCTA 1198
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      AGTCAGTTTGAACATGAAAATATAGTCCAGTATTATGGAACTGACAAGGAAGAATCAAAA 1258
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      CTGTACATTTTTATTGAGCTTGTTACACAAGGTTCTCTATCGTCCCTCTATCAAAAGTAT 1318
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      AAACTACGAGACTCACAAGTGTCAGCATACACAAGGCAGATTCTCAACGGATTGGTTTAT 1378
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      CTCCATGAGCGAAATGTGGTTCACAGAGACATTAAATGCGCAAATATACTGGTTCATGCA 1438
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      AATGGATCAGTAAAATTGGCAGACTTTGGGTTGGCGAAGGAGATGTCAAAAATTAACATG 1498
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      CTGAGATCATGCAAAGGAAGTGTTTATTGGATGGCACCTGAGGTTGTTAATCCTAAAAAA 1558
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      ACATATGGGCCCCAGGCTGATATTTGGAGTCTTGGCTGCACTGTATTGGAAATGCTTACT 1618
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      CGTAACATACCATATCCTAATGTGGAGTGGACAAATGCTTTTTTTATGATTGGAAAAGGA 1678
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      GAACGACCTCAAATTCCCAGCTATTTGTCAAAAGATGCTCAAGATTTCATTAGCCAGTGT 1738
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      GTACAAGTTGATCCAGAGCAACGGCCTTCTGCATCACAACTTATGTCACACCCATTTGTT 1798
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      AATAGACCGCTTCGAGCTTCTTTTGAATCTGCATCCCCTCCTGCCATCAGCTCGTATTGA 1858
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      TTGTGGCATGCTTCTGTTTTTGAGAACATTGCTGAGCTCATGAACAAATCTTCGTGGTTC 1918
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      CCACTCAGTGCCAGAAAGGAACTTCTTGGGCTTGTTTAGGATATAGTTTAGCATTTTAGT 1978
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      CAGTTAGGACTAGTGAGATAAGCATTACCTTGCTGCGTCGGTCTGGGAATATTTGAGTGT 2038
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      TTTCTTGTTGAAGACATTCAGTAGATTTTGTACGACCTGGTAGGGGGGAGATGGAATTGC 2098
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      TTGCAATGTATTTGAGCTTAAGCCATTGTAAATTTTTGACTTCATCATTATTTTGGTTTG 2158
consensus_12925#1      ------------------------------------------------------------
                                                                                   

consensus_12925#0      TTGCTCCTGAAGCACTCAGCTAAAAAAAAAAA 2190
consensus_12925#1      --------------------------------