|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12926#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1976 fasta sequence
[GTTACTGAGCATTATTGGTTTCCTATGCTAGCTGGCCTATCAGATTTAACTTTAGACCCCAGACCAGAAGTTAGACACTGTGCACTTGAAGTGTTGTTTGATCTTCTGAATGAGAGAGGTCATAAATTCTCCTCACCTTTTTGGGAGAGCATTTTTCATCGTGTATTATTTCCCATATTTGATCATGTAAGGCATGCTGGAAGGGATGGCCTTTCTTCTGGGGATGACTGGCTTCGTGATACCAGCATTCATTCTCTGCAGTTAATCTGCAACCTTTTCAATACTTTCTACAAGGAGGTGTCATTTATGCTTCCACCTCTTTTGGGCTTGCTGCTTGAGTGTGCCAAGAAAACAGACCAGACTGTTGTTTCAATTGCTCTTGGAGCTTTAGTTCATCTCATAGAGGTT-GGTGGTCACCAATTCAGTGACAGCGACTGGGAAACACTTCTAAAGAGCATTAGAGATGCATCATACACAACCCAACCTCTCGAACTCCTCAATTCAGTAGGATTTCAGAAACCAAACAATCAGCAATCACTTTCAAGAGAAGCAGAGACCAACGGTCTTGGTAGTAGTTACCATGATAGCAGGGAAGGAGGAGCTTCAATAAGTCATATTGATGAACAGGATGGTCATCAGGAAACAAATGCACAGACTAGCCTAGACAATTCAGAAGGTTTGCCATCTCCATCAGGGAGAGCACAACCTGCAGTTTCCCCACGGGGTCAGACCTTTGGACAAAGAATTATGGGGAATATGATGGACAATCTTTTGGTCAGGAGTCTTACTTCCAAATCAAAAGGTCGTACAGACGATATTGTGCCACCCTCACCTGTGAAGGCACCTGATGCTGACGGGGCTGACAAAACTGACGATGAAGAGAATCCTATGATGGAGACTGTTAGGAGTAAATGTATCACTCAATTACTGCTACTTGGGGCCATTGACAGCATACAGAAGAGGTACTGGAGCAGGCTAAAAACCACACAGCAGACTGCAATAATGGATATTTTGCTATCACTCCTAGAATTTGCTTCTTCCTATAACTCAACTTCAAATCTTCGAACCAGGATGCACCATATACCCCCAGAAAGGCCTCCACTGAATCTTCTTCGCCAGGAACTAGCTGGAACTGCTATCTATTTGGAGATTCTTCAGAAATCAACTGTGGAACATGATGGGAATGACCCAAGTGAGGATACAAATGGGCACGTCATAGAATCTGATGAACATGAAAAGCTCAAGAGCCTCGCAGAAGGGAAGCTTGTTTCGTTTTGTGGGCAGATCTTGAAAGATGCTTCTGATCTCCAGCCAAGCACTGGGGAAGCTGCAAGTGCAGACATACACCGTGTACTGGACCTAAGAGCACCAGTTATTGTCAAGGTTTTGAATGGAATGTGTATCATGGACGCTCAGATATTCAAGAAGCACATCAGAGAGTTCTATCCATTAATTACAAAACTTATCTGCTGTGATCAGATGGATGTTCGTGGTGCCCTTGGTGACCTTTTCAGCAAACAACTTACCCCACTCATGCCCTGAGTTGTGATTGTACCTCCTTCCGTTGCATATATCTTCTCTTGTTGGAGTATATTCAGTATTAGCATTTTTGTGCAAACATGGAGCGTCAGAAAGAAGCTTAACGCCCTTAAAGGCACACATCTGAGCTCGGTAGGCTGTAAATTGACAAGCTTAAGGTTTTTGCAGGTGTTTTAAGTACGCAAGAAAATTAGCTTTGCATGTTGCGCATGAAATTTTTCCTTGCCACTTTCGTTCTGTGTATTATTATTTATCTATGCGGGGACTGGAACTATGCTTCTATACACAAGTAGAGGATTGAGGCGAGGGAATAGCATTGGCTAGTGCTATGTATACATTGTTCAGGATATTGTACTCGAGGCGTGTTGTTATACGGCAATACTAGATTACTCTTGGTAGAGCATCTAGGTTGGTGCATTCAATAAAAGTTGTGTCAT]
[+] EMBL CF324281 [GTTACTGAGCATTATTGGTTTCCTATGCTAGCTGGCCTATCAGATTTAACTTTAGACCCCAGACCAGAAGTTAGACACTGTGCACTTGAAGTGTTGTTTGATCTTCTGAATGAGAGAGGTCATAAATTCTCCTCACCTTTTTGGGAGAGCATTTTTCATCGTGTATTATTTCCCATATTTGATCATGTAAGGCATGCTGGAAGGGATGGCCTTTCTTCTGGGGATGACTGGCTTCGTGATACCAGCATTCATTCTCTGCAGTTAATCTGCAACCTTTTCAATACTTTCTACAAGGAGGTGTCATTTATGCTTCCACCTCTTTTGGGCTTGCTGCTTGAGTGTGCCAAGAAAACAGACCAGACTGTTGTTTCAATTGCTCTTGGAGCTTTAGTTCATCTCATAGAGGTTGGGTGGTCACCAATTCAGTGACAGCGACTGGGAAACACTTCTAAAGAGCATTAGAGATGCATCATACACAACCCAA ]
[+] EMBL CB643244 [ TCCTATGCTAGCTGGCCTATCAGATTTAACTTTAGACCCCAGACCAGAAGTTAGACACTGTGCACTTGAAGTGTTGTTTGATCTTCTGAATGAGAGAGGTCATAAATTCTCCTCACCTTTTTGGGAGAGCATTTTTCATCGTGTATTATTTCCCATATTTGATCATGTAAGGCATGCTGGAAGGGATGGCCTTTCTTCTGGGGATGACTGGCTTCGTGATACCAGCATTCATTCTCTGCAGTTAATCTGCAACCTTTTCAATACTTTCTACAAGGAGGTGTCATTTATGCTTCCACCTCTTTTGGGCTTGCTGCTTGAGTGTGCCAAGAAAACAGACCAGACTGTTGTTTCAATTGCTCTTGGAGCTTTAGTTCATCTCATAGAGGTT GGTGGTCACCAATTCAGTGACAGCGACTGGGAAACACTTCTAAAGAGCATTAGAGATGCATCATACACAACCCAACCTCTCGAACTCCTCAATTCAGTAGGATTTCAGAAACCAAACAATCAGCAATCACTTTCAAGAGAAGCAGAGACCAACGGTCTTGGTAGTAGTTACCATGATAGCAGGGAAGGAGGAGCTTCAATAAGTCATATTGATGAACAGGATGGTCATCAGGAAACAAATGCACAGACTAGCCTAGACAATTCAGAAGGTTTGCCATCTCCATCAGGGAGAGCACAACCTGCAGTTTCCCCACGGGGTCAGACCTTTGGACAAAGAATTATGGGGAATATGATGGACAATCTTTTGGTCAGGAGTCTTACTTCCAAATCAAAAGGTCGTACAGAC ]
[+] EMBL AK059018 [ GAAACCAAACAATCAGCAATCACTTTCAAGAGAAGCAGAGACCAACGGTCTTGGTAGTAGTTACCATGATAGCAGGGAAGGAGGAGCTTCAATAAGTCATATTGATGAACAGGATGGTCATCAGGAAACAAATGCACAGACTAGCCTAGACAATTCAGAAGGTTTGCCATCTCCATCAGGGAGAGCACAACCTGCAGTTTCCCCACGGGGTCAGACCTTTGGACAAAGAATTATGGGGAATATGATGGACAATCTTTTGGTCAGGAGTCTTACTTCCAAATCAAAAGGTCGTACAGACGATATTGTGCCACCCTCACCTGTGAAGGCACCTGATGCTGACGGGGCTGACAAAACTGACGATGAAGAGAATCCTATGATGGAGACTGTTAGGAGTAAATGTATCACTCAATTACTGCTACTTGGGGCCATTGACAGCATACAGAAGAGGTACTGGAGCAGGCTAAAAACCACACAGCAGACTGCAATAATGGATATTTTGCTATCACTCCTAGAATTTGCTTCTTCCTATAACTCAACTTCAAATCTTCGAACCAGGATGCACCATATACCCCCAGAAAGGCCTCCACTGAATCTTCTTCGCCAGGAACTAGCTGGAACTGCTATCTATTTGGAGATTCTTCAGAAATCAACTGTGGAACATGATGGGAATGACCCAAGTGAGGATACAAATGGGCACGTCATAGAATCTGATGAACATGAAAAGCTCAAGAGCCTCGCAGAAGGGAAGCTTGTTTCGTTTTGTGGGCAGATCTTGAAAGATGCTTCTGATCTCCAGCCAAGCACTGGGGAAGCTGCAAGTGCAGACATACACCGTGTACTGGACCTAAGGGCACCAGTTATTGTCAAGGTTTTGAATGGAATGTGTATCATGGACGCTCAGATATTCAAGAAGCACATCAGAGAGTTCTATCCATTAATTACAAAACTTATCTGCTGTGATCAGATGGATGTTCGTGGTGCCCTTGGTGACCTTTTCAGCAAACAACTTACCCCACTCATGCCCTGAGTTGTGATTGTACCTCCTTCCGTTGCATATATCTTCTCTTGTTGGAGTATATTCAGTATTAGCATTTTTGTGCAAACATGGAGCGTCAGAAAGAAGCTTAACGCCCTTAAAGGCACACATCTGAGCTCGGTAGGCTGTAAATTGACAAGCTTAAGGTTTTTGCAGGTGTTCTAAGTACGCAAGAAAATTAGCTTTGCATGTTGCGCATGAAATTTTTCCTTGCCACTTTCGTTCTGTGTATTATTATTTATCTATGCGGGGACTGGAACTATGCTTCTATACACAAGTAGAGGATTGAGGCGAGGGAATAGCATTGGCTAGTGCTATGTATACATTGTTCAGGATATTGTACTCGAGGCGTGTTGTTATACGGCAATACTAGATTACTCTTGGTAGAGCATCTAGGTTGGTGCATTCAATAAAAGTTGTGTCAT]
[-] EMBL CF316991 [ CTGTGGAACATGATGGGAATGACCCAAGTGAGGATACAAATGGGCACGTCATAGAATCTGATGAACATGAAAAGCTCAAGAGCCTCGCAGAAGGGAAGCTTGTTTCGTTTTGTGGGCAGATCTTGAAAGATGCTTCTGATCTCCAGCCAAGCACTGGGGAAGCTGCAAGTGCAGACATACACCGTGTACTGGACCTAAGAGCACCAGTTATTGTCAAGGTTTTGAATGGAATGTGTATCATGGACGCTCAGATATTCAAGAAGCACATCAGAGAGTTCTATCCATTAATTACAAAACTTATCTGCTGTGATCAGATGGATGTTCGTGGTGCCCTTGGTGACCTTTTCAGCAAACAACTTACCCCACTCATGCCCTGAGTTGTGATTGTACCTCCTTCCGTTGCATATATCTTCTCTTGTTGGAGTATATTCAGTATTAGCATTTTTGTGCAAACATGGAGCGTCAGAAAGAAGCTTAACGCCCTTAAAGGCACACATTTGAGCTCGGTAGGCTGTAAATTGACAAGCTTAAGGTTTTTGCAGGTGTTTTAAGTACGCAAGAAAATTAGCTTTGCATGTTGCGCATGAAAaaaaa ]
[-] EMBL CB677048 [ ACTGGGGAAGCTGCAAGTGCAGACATACACCGTGTACTGGACCTAAGAGCACCAGTTATTGTCAAGGTTTTGAATGGAATGTGTATCATGGACGCTCAGATATTCAAGAAGCACATCAGAGAGTTCTATCCATTAATTACAAAACTTATCTGCTGTGATCAGATGGATGTTCGTGGTGCCCTTGGTGACCTTTTCAGCAAACAACTTACCCCACTCATGCCCTGAGTTGTGATTGTACCTCCTTCCGTTGCATATATCTTCTCTTGTTGGAGTATATTCAGTATTAGCATTTTTGTGCAAACATGGAGCGTCAGAAAGAAGCTTAACGCCCTTAAAGGCACACATCTGAGCTCGGTAGGCTGTAAATTGACAAGCTTAAGGTTTTTGCAGGTGTTTTAAGTACGCAAGAAAATTAGCTTTGCATGTTGCGCATGAAATTTTTCCTTGCCACTTTCGTTCTATGTATTATTATTTATCTATGCGGGGACTGGAACTATGCTTCTATACACAAGTAGAGGATTGAGGCGAGGGAATAGCATTGGCTAGGGCTATGTATACATTGTTCAGGATATTGTACTCGAGGCGTGTTGTTATACGGCAATACTAGATTACTCTTGAGGGAGCATCTAGGTT ]
consensusID : consensus_12926#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 891 fasta sequence
[GACTGGACTGAAGGAGTAGAAAGGTAGTAGTTACCATGATAGCAGGGAAGGAGGAGCTTCAATAAGTCATATTGATGAACAGGATGGTCATCAGGAAACAAATGCACAGACTAGCCTAGACAATTCAGAAGGTTTGCCATCTCCATCAGGGAGAGCACAACCTGCAGTTTCCCCACGGGGTCAGACCTTTGGACAAAGAATTATGGGGAATATGATGGACAATCTTTTGGTCAGGAGTCTTACTTCCAAATCAAAAGGTCGTACAGACGATATTGTGCCACCCTCACCTGTGAAGGCACCTGATGCTGACGGGGCTGACAAAACTGACGATGAAGAGAATCCTATGATGGAGACTGTTAGGAGTAAATGTATCACTCAATTACTGCTACTTGGGGCCATTGACAGCATACAGAAGAGGTACTGGAGCAGGCTAAAAACCACACAGCAGACTGCAATAATGGATATTTTGCTATCACTCCTAGAATTTGCTTCTTCCTATAACTCAACTTCAAATCTTCGAACCAGGATGCACCATATACCCCCAGAAAGGCCTCCACTGAATCTTCTTCGCCAGGAACTAGCTGGAACTGCTATCTATTTGGAGATTCTTCAGAAATCAACTGTGGAACATGATGGGAATGACCCAAGTGAGGATACAAATGGGCACGTCATAGAATCTGATGAACATGAAAAGCTCAAGAGCCTCGCAGAAGGGAAGCTTGTTTCGTTTTGTGGCAGATCTTGAAAGATGCTTCTGATCTCCAGCCAAGCACTGGGGAAGCTGCAAGTGCAGACATACACCGTGTACTGGACCTAAGAGCACCAGTTATTGTCAAGGTTTTGAATGGAATGTAGACCTGTCTGCAGCGCCGCCCATGGGATATCATCGAT]
[+] EMBL CF316990 [GACTGGACTGAAGGAGTAGAAAGGTAGTAGTTACCATGATAGCAGGGAAGGAGGAGCTTCAATAAGTCATATTGATGAACAGGATGGTCATCAGGAAACAAATGCACAGACTAGCCTAGACAATTCAGAAGGTTTGCCATCTCCATCAGGGAGAGCACAACCTGCAGTTTCCCCACGGGGTCAGACCTTTGGACAAAGAATTATGGGGAATATGATGGACAATCTTTTGGTCAGGAGTCTTACTTCCAAATCAAAAGGTCGTACAGACGATATTGTGCCACCCTCACCTGTGAAGGCACCTGATGCTGACGGGGCTGACAAAACTGACGATGAAGAGAATCCTATGATGGAGACTGTTAGGAGTAAATGTATCACTCAATTACTGCTACTTGGGGCCATTGACAGCATACAGAAGAGGTACTGGAGCAGGCTAAAAACCACACAGCAGACTGCAATAATGGATATTTTGCTATCACTCCTAGAATTTGCTTCTTCCTATAACTCAACTTCAAATCTTCGAACCAGGATGCACCATATACCCCCAGAAAGGCCTCCACTGAATCTTCTTCGCCAGGAACTAGCTGGAA ]
[-] EMBL CB238431 [ CACCATATACCCCCAGAAAGGCCTCCACTGAATCTTCTTCGCCAGGAACTAGCTGGAACTGCTATCTATTTGGAGATTCTTCAGAAATCAACTGTGGAACATGATGGGAATGACCCAAGTGAGGATACAAATGGGCACGTCATAGAATCTGATGAACATGAAAAGCTCAAGAGCCTCGCAGAAGGGAAGCTTGTTTCGTTTTGTGGCAGATCTTGAAAGATGCTTCTGATCTCCAGCCAAGCACTGGGGAAGCTGCAAGTGCAGACATACACCGTGTACTGGACCTAAGAGCACCAGTTATTGTCAAGGTTTTGAATGGAATGTAGACCTGTCTGCAGCGCCGCCCATGGGATATCATCGAT]
consensusID : consensus_12926#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 683 fasta sequence
[TGCTTATGTATCCACCCCAGCACTGGGTAAGCTGCAAGTCGGCCATCACCGTGTACTGGCCTAAGAGCACCAGATATTCTCAAGGCTTGAATGGAATGTGTATCATGGACGGTCATATATTCAAGAGGCNCATCAGAGAGTTCTATCCATAAATATCAAAACTTTTTTTCTGTAACCAGACGGATGTTCTTGGTGCCCTTGGTCACCTTTTCAGCATACAACTTTCCCCGCTCAGGCCGTGAGTTGTGATTGTCCCTCCATCCCAGCAGTATATTTTGTCTTGTTGGAGTATAGTCAGTATTAGCCTTTTTGGGCAAACACGGAGCGTCAGAAAAAAGCTTACCGCCCTTAAAGGCACTCATCTGAGGTCGGTAGGCTGTAAATTGGCAAGCTTAAGGTTTGTGCAGGTGTTTTAAGTCCGCAAGAAAATAAGCTATGCATGTTGCGCATGAAATTTTTCCCTGCCACATTCGCTTTACGTATTATTAATGGTGCTATGCGGGGACTGGAACTAAGCTTCTATGCCCAAGTAGAGGATTGAGCGCGAGGGAATAACATTGGCTAATACTAAGTAAACATTGTTCGGGGTATAGTTCTCGAGGCGGGTGGTTACACGGCAATGCTAGATTACTCTGGGTAGAGCATCTAGGTTGGTGCCTTCATTAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA763557 [TGCTTATGTATCCACCCCAGCACTGGGTAAGCTGCAAGTCGGCCATCACCGTGTACTGGCCTAAGAGCACCAGATATTCTCAAGGCTTGAATGGAATGTGTATCATGGACGGTCATATATTCAAGAGGCNCATCAGAGAGTTCTATCCATAAATATCAAAACTTTTTTTCTGTAACCAGACGGATGTTCTTGGTGCCCTTGGTCACCTTTTCAGCATACAACTTTCCCCGCTCAGGCCGTGAGTTGTGATTGTCCCTCCATCCCAGCAGTATATTTTGTCTTGTTGGAGTATAGTCAGTATTAGCCTTTTTGGGCAAACACGGAGCGTCAGAAAAAAGCTTACCGCCCTTAAAGGCACTCATCTGAGGTCGGTAGGCTGTAAATTGGCAAGCTTAAGGTTTGTGCAGGTGTTTTAAGTCCGCAAGAAAATAAGCTATGCATGTTGCGCATGAAATTTTTCCCTGCCACATTCGCTTTACGTATTATTAATGGTGCTATGCGGGGACTGGAACTAAGCTTCTATGCCCAAGTAGAGGATTGAGCGCGAGGGAATAACATTGGCTAATACTAAGTAAACATTGTTCGGGGTATAGTTCTCGAGGCGGGTGGTTACACGGCAATGCTAGATTACTCTGGGTAGAGCATCTAGGTTGGTGCCTTCATTAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_12926#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 615 fasta sequence
[AGAGGACGAGACANGGGGGNGGAACATGATGGGATGACCCAAGTGAGGATACANATGGGCACGTCATAGAATCTGNTGANCATGANAAGCTCAAGAGCCTCGCNGAAGGGAANCTTGTTTCGTTTTGNGGGCACGATCTTGAAAGATGCTTCTGATCTCCAGCCAAGCACTGGGGAAGCTGCAAGTGCAGACATACACCGTGTACTGGACCTAAGAGCACCAGNTATTGTCAAGGCTTTGAATGGAATGTGTATCATGGACGCTCAGATATTCAAGAAGCACATCANAGAGTTCTATCCATTAATTACAAAACTTATCTGCTGAGATCAGATGGATGTTCGTGGAGCCCTTGGTGACCTTTTCAGCANACAACTTACCCCACTCATGCCCTGAGTTCTGATTGTACCTCCTTCCGTTGCATATATCTTCTCTTGTTGGAGNATATTCAGNATTANCATTTTTGTGCAAACATGNANCGTCAGAAAGAAGCTTAACGCCCTTAAAGGCACACATCTGAGCTCGGNAGGCTGTAAATTGACAAGCTTAAGGTTTTTGCAGGTGNTCTAAGTACGCANGAAAATTAGCTTTGNATGTTGCGCCATGAAATTTTTCCTT]
[+] EMBL CB096548 [AGAGGACGAGACANGGGGGNGGAACATGATGGGATGACCCAAGTGAGGATACANATGGGCACGTCATAGAATCTGNTGANCATGANAAGCTCAAGAGCCTCGCNGAAGGGAANCTTGTTTCGTTTTGNGGGCACGATCTTGAAAGATGCTTCTGATCTCCAGCCAAGCACTGGGGAAGCTGCAAGTGCAGACATACACCGTGTACTGGACCTAAGAGCACCAGNTATTGTCAAGGCTTTGAATGGAATGTGTATCATGGACGCTCAGATATTCAAGAAGCACATCANAGAGTTCTATCCATTAATTACAAAACTTATCTGCTGAGATCAGATGGATGTTCGTGGAGCCCTTGGTGACCTTTTCAGCANACAACTTACCCCACTCATGCCCTGAGTTCTGATTGTACCTCCTTCCGTTGCATATATCTTCTCTTGTTGGAGNATATTCAGNATTANCATTTTTGTGCAAACATGNANCGTCAGAAAGAAGCTTAACGCCCTTAAAGGCACACATCTGAGCTCGGNAGGCTGTAAATTGACAAGCTTAAGGTTTTTGCAGGTGNTCTAAGTACGCANGAAAATTAGCTTTGNATGTTGCGCCATGAAATTTTTCCTT]
consensusID : consensus_12926#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 418 fasta sequence
[GACACTGACATGGACAGAAGGAGTAGAAATATATTCAGTATTAGCATTTTTGTGCAAACATGGAGCGTCAGAAAGAAGCTTAACGCCCTTAAAGGCACACATCTGAGCTCGGTAGGCTGTAAATTGACAAGCTTAAGGTTTTTGCAGGTGCTCTAAGTACGCAAGAAAATTAGCTTTGCATGTTGCGCATGAAATTTTTCCTTGCCACTTTCGTTCTATGTATTATTATTTATCTATGCGGGGACTGGAACTATGCTTCTATACACAAGTAGAGGATTGAGGCGAGGGAATAGCATTGGCTAGTGCTATGTATACATTGTTCAGGATATTGTACTCGAGGCGTGTTGTTATACGGCAATACTAGATTACTCTTGGTAGAGCATCTAGGTTGGTGCATTCAATAAAAAAAAAAAAAAAA]
[+] EMBL CF329788 [GACACTGACATGGACAGAAGGAGTAGAAATATATTCAGTATTAGCATTTTTGTGCAAACATGGAGCGTCAGAAAGAAGCTTAACGCCCTTAAAGGCACACATCTGAGCTCGGTAGGCTGTAAATTGACAAGCTTAAGGTTTTTGCAGGTGCTCTAAGTACGCAAGAAAATTAGCTTTGCATGTTGCGCATGAAATTTTTCCTTGCCACTTTCGTTCTATGTATTATTATTTATCTATGCGGGGACTGGAACTATGCTTCTATACACAAGTAGAGGATTGAGGCGAGGGAATAGCATTGGCTAGTGCTATGTATACATTGTTCAGGATATTGTACTCGAGGCGTGTTGTTATACGGCAATACTAGATTACTCTTGGTAGAGCATCTAGGT ]
[-] EMBL CF329789 [ AGAAGGAGTAGAAATATATTCAGTATTAGCATTTTTGTGCAAACATGGAGCGTCAGAAAGAAGCTTAACGCCCTTAAAGGCACACATCTGAGCTCGGTAGGCTGTAAATTGACAAGCTTAAGGTTTTTGCAGGTGCTCTAAGTACGCAAGAAAATTAGCTTTGCATGTTGCGCATGAAATTTTTCCTTGCCACTTTCGTTCTATGTATTATTATTTATCTATGCGGGGACTGGAACTATGCTTCTATACACAAGTAGAGGATTGAGGCGAGGGAATAGCATTGGCTAGTGCTATGTATACATTGTTCAGGATATTGTACTCGAGGCGTGTTGTTATACGGCAATACTAGATTACTCTTGGTAGAGCATCTAGGTTGGTGCATTCAATAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 GTTACTGAGCATTATTGGTTTCCTATGCTAGCTGGCCTATCAGATTTAACTTTAGACCCC 60
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 AGACCAGAAGTTAGACACTGTGCACTTGAAGTGTTGTTTGATCTTCTGAATGAGAGAGGT 120
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 CATAAATTCTCCTCACCTTTTTGGGAGAGCATTTTTCATCGTGTATTATTTCCCATATTT 180
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 GATCATGTAAGGCATGCTGGAAGGGATGGCCTTTCTTCTGGGGATGACTGGCTTCGTGAT 240
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 ACCAGCATTCATTCTCTGCAGTTAATCTGCAACCTTTTCAATACTTTCTACAAGGAGGTG 300
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 TCATTTATGCTTCCACCTCTTTTGGGCTTGCTGCTTGAGTGTGCCAAGAAAACAGACCAG 360
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 ACTGTTGTTTCAATTGCTCTTGGAGCTTTAGTTCATCTCATAGAGGTTGGTGGTCACCAA 420
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 TTCAGTGACAGCGACTGGGAAACACTTCTAAAGAGCATTAGAGATGCATCATACACAACC 480
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 CAACCTCTCGAACTCCTCAATTCAGTAGGATTTCAGAAACCAAACAATCAGCAATCACTT 540
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 TCAAGAGAAGCAGAGACCAACGGTCTTGGTAGTAGTTACCATGATAGCAGGGAAGGAGGA 600
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 GCTTCAATAAGTCATATTGATGAACAGGATGGTCATCAGGAAACAAATGCACAGACTAGC 660
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 CTAGACAATTCAGAAGGTTTGCCATCTCCATCAGGGAGAGCACAACCTGCAGTTTCCCCA 720
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 CGGGGTCAGACCTTTGGACAAAGAATTATGGGGAATATGATGGACAATCTTTTGGTCAGG 780
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 AGTCTTACTTCCAAATCAAAAGGTCGTACAGACGATATTGTGCCACCCTCACCTGTGAAG 840
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 GCACCTGATGCTGACGGGGCTGACAAAACTGACGATGAAGAGAATCCTATGATGGAGACT 900
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 GTTAGGAGTAAATGTATCACTCAATTACTGCTACTTGGGGCCATTGACAGCATACAGAAG 960
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 AGGTACTGGAGCAGGCTAAAAACCACACAGCAGACTGCAATAATGGATATTTTGCTATCA 1020
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 CTCCTAGAATTTGCTTCTTCCTATAACTCAACTTCAAATCTTCGAACCAGGATGCACCAT 1080
consensus_12926#1 ------------------------------------------------------------
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 ATACCCCCAGAAAGGCCTCCACTGAATCTTCTTCGCCAGGAACTAGCTGGAACTGCTATC 1140
consensus_12926#1 ----------------------------------------------GACTGGACTGAAGG 14
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ---------AGAGGACGAGACANGGGGGNGGAACATGATGGGA-TGACCCAAGTGAGGAT 50
consensus_12926#0 TATTTGGAGATTCTTCAGAAATCAACTGTGGAACATGATGGGAATGACCCAAGTGAGGAT 1200
consensus_12926#1 AGTAGAAAGGTAGTAGTTACCATGATAGCAGGGAAGGAGGAGCTTCAATAAGTCATATTG 74
consensus_12926#2 ------------------------------------------------------------
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 ACANATGGGCACGTCATAGAATCTGNTGANCATGANAAGCTCAAGAGCCTCGCNGAAGGG 110
consensus_12926#0 ACAAATGGGCACGTCATAGAATCTGATGAACATGAAAAGCTCAAGAGCCTCGCAGAAGGG 1260
consensus_12926#1 ATGAACAGGATGGTCATCAGGAAACAAATGCACAGACTAGCCTAGACAATTCAGAAGGTT 134
consensus_12926#2 ------------------------------------TGCTTATG-TATCCACCCCAGCAC 23
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 AANCTTGTTTCGTTTTGNGGGCACGATCTTGAAAGATGCTTCTGATCTCCAGCCAAGCAC 170
consensus_12926#0 AAGCTTGTTTCGTTTTGTGGGCA-GATCTTGAAAGATGCTTCTGATCTCCAGCCAAGCAC 1319
consensus_12926#1 TGCCATCTCCATCAGGGAGAGCACAACCTGCAGTTTCCCCACGGGGTCAGACCTTTGGAC 194
consensus_12926#2 TGGGTAAGCTGCAAGTC--GGCCATCACCGTGT--ACTGG-CCTAAGAGCACCAGATATT 78
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 TGGGGAAGCTGCAAGTGCAGACATACACCGTGT--ACTGGACCTAAGAGCACCAGNTATT 228
consensus_12926#0 TGGGGAAGCTGCAAGTGCAGACATACACCGTGT--ACTGGACCTAAGAGCACCAGTTATT 1377
consensus_12926#1 AAAGAATTATGGGGAATATGATGGACAATCTTTTGGTCAGGAGTCTTACTTCCAAATCAA 254
consensus_12926#2 CTCAAGGCTT-GAATGGAATGTGTATCATGGACGGTCATATATTCAAGAGGCNCATCAGA 137
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 GTCAAGGCTTTGAATGGAATGTGTATCATGGACGCTCAGATATTCAAGAAGCACATCANA 288
consensus_12926#0 GTCAAGGTTTTGAATGGAATGTGTATCATGGACGCTCAGATATTCAAGAAGCACATCAGA 1437
consensus_12926#1 AAGGTCGTACAGACGATATTGTGCCACCCTCACCTGTGAAGGCACCTGATGCTGACGGGG 314
consensus_12926#2 GAGTTCTATCCATAAATATCAAAACTTTTTTTCTGTAACCAGACGGATGTTCTTGGTGCC 197
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 GAGTTCTATCCATTAATTACAAAACTTATCTGCTGAGATCAGATGGATGTTCGTGGAGCC 348
consensus_12926#0 GAGTTCTATCCATTAATTACAAAACTTATCTGCTGTGATCAGATGGATGTTCGTGGTGCC 1497
consensus_12926#1 CTGACAAAACTGACGATGAAGAGAATCCTATGATGGAGACTGTTAGGAGTAAATGTATCA 374
consensus_12926#2 CTTGGTCACCTTTTCAGCATACAACTTTCCCCGCTCAGGCCGTGAGTTGTGATTGTCCCT 257
consensus_12926#4 ------------------------------------------------------------
consensus_12926#3 CTTGGTGACCTTTTCAGCANACAACTTACCCCACTCATGCCCTGAGTTCTGATTGTACCT 408
consensus_12926#0 CTTGGTGACCTTTTCAGCAAACAACTTACCCCACTCATGCCCTGAGTTGTGATTGTACCT 1557
consensus_12926#1 CTCAATTACTGCTACTTGGGGCCATTGACAGCATACAGAAGAGGTACTGGAGCAGGCTAA 434
consensus_12926#2 CCATCCCAGCA------GTATATTTTGTCTT-GTTGGAGTATAGTCAGTATTAGCCTTTT 310
consensus_12926#4 ----GACACTG------ACATGGACAGAAGGAGTAGAAATATATTCAGTATTAGCATTTT 50
consensus_12926#3 CCTTCCGTTGC------ATATATCTTCTCTT-GTTGGAGNATATTCAGNATTANCATTTT 461
consensus_12926#0 CCTTCCGTTGC------ATATATCTTCTCTT-GTTGGAGTATATTCAGTATTAGCATTTT 1610
consensus_12926#1 AAACCACACAGCAGACTGCAATAATGGATATTTTGCTATCACTCCTAGAATTTGCTTCTT 494
* * * * ** *** * * **
consensus_12926#2 TGGGCAA----ACACGGAGCGT------CAGAAAAAAGCTTACCGCCCTTAAAGGCACTC 360
consensus_12926#4 TGTGCAA----ACATGGAGCGT------CAGAAAGAAGCTTAACGCCCTTAAAGGCACAC 100
consensus_12926#3 TGTGCAA----ACATGNANCGT------CAGAAAGAAGCTTAACGCCCTTAAAGGCACAC 511
consensus_12926#0 TGTGCAA----ACATGGAGCGT------CAGAAAGAAGCTTAACGCCCTTAAAGGCACAC 1660
consensus_12926#1 CCTATAACTCAACTTCAAATCTTCGAACCAGGATGCACCATATACCCCCAGAAAGGCCTC 554
** ** * * *** * * * ** *** ** * * *
consensus_12926#2 ATCTGAGGTCGGTAGGCTGTAAATTGGC---AAGCTTAAGGTTTGTGCAGGTGTTTTA-- 415
consensus_12926#4 ATCTGAGCTCGGTAGGCTGTAAATTGAC---AAGCTTAAGGTTTTTGCAGGTGCTCTA-- 155
consensus_12926#3 ATCTGAGCTCGGNAGGCTGTAAATTGAC---AAGCTTAAGGTTTTTGCAGGTGNTCTA-- 566
consensus_12926#0 ATCTGAGCTCGGTAGGCTGTAAATTGAC---AAGCTTAAGGTTTTTGCAGGTGTTTTA-- 1715
consensus_12926#1 CACTGAATCTTCTTCGCCAGGAACTAGCTGGAACTGCTATCTATTTGGAGATTCTTCAGA 614
**** ** ** * * ** * * * ** ** * * *
consensus_12926#2 AGTCCGCAAGAAAATAAGCTATGCATGTTGC--GC-ATGAAATTTTTCCCTGCCACATTC 472
consensus_12926#4 AGTACGCAAGAAAATTAGCTTTGCATGTTGC--GC-ATGAAATTTTTCCTTGCCACTTTC 212
consensus_12926#3 AGTACGCANGAAAATTAGCTTTGNATGTTGC--GCCATGAAATTTTTCCTT--------- 615
consensus_12926#0 AGTACGCAAGAAAATTAGCTTTGCATGTTGC--GC-ATGAAATTTTTCCTTGCCACTTTC 1772
consensus_12926#1 AATCAACTGTGGAACATGATGGGAATGACCCAAGTGAGGATACAAATGGGCACGTCATAG 674
* * * ** * * * *** * * * ** * *
consensus_12926#2 GCTTTACGTATTATTAATGGTGCTATGCGGGGACTGGAACTAAGCTTCTATGCCCAAGTA 532
consensus_12926#4 GTTCTATGTATTATTATTTAT-CTATGCGGGGACTGGAACTATGCTTCTATACACAAGTA 271
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 GTTCTGTGTATTATTATTTAT-CTATGCGGGGACTGGAACTATGCTTCTATACACAAGTA 1831
consensus_12926#1 AATCTGATGAACATGAAAAGCTCAAGAGCCTCGCAGAAGGGAAGCTTGTTTCGTTTTGTG 734
consensus_12926#2 GAGGATTGAGCGCGAGGGAATAACATT---GGCTAATACTAAGTAAAC-ATTGTTCGGGG 588
consensus_12926#4 GAGGATTGAG-GCGAGGGAATAGCATT---GGCTAGTGCTATGTATAC-ATTGTTCAGGA 326
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 GAGGATTGAG-GCGAGGGAATAGCATT---GGCTAGTGCTATGTATAC-ATTGTTCAGGA 1886
consensus_12926#1 GCAGATCTTGAAAGATGCTTCTGATCTCCAGCCAAGCACTGGGGAAGCTGCAAGTGCAGA 794
consensus_12926#2 TATAGTTCTCGAGGCGGGTGGTTACACGGCAATGCTAGATTACTCTGGGTAGAGCATCTA 648
consensus_12926#4 TATTGTACTCGAGGCGTGTTGTTATACGGCAATACTAGATTACTCTTGGTAGAGCATCTA 386
consensus_12926#3 ------------------------------------------------------------
consensus_12926#0 TATTGTACTCGAGGCGTGTTGTTATACGGCAATACTAGATTACTCTTGGTAGAGCATCTA 1946
consensus_12926#1 CATACACCGTGTACTGGACCTAAGAGCACCAGTTATTGTCAAGGTTTTGAATGGAATGTA 854
consensus_12926#2 GGTTGGTGCCTTCATTAAAAAAAAAAAAAAAAAAA-- 683
consensus_12926#4 GGTTGGTGCATTCAATAAAAAAAAAAAAAAAA----- 418
consensus_12926#3 -------------------------------------
consensus_12926#0 GGTTGGTGCATTCAATAAAAGTTGTGTCAT------- 1976
consensus_12926#1 GACCTGTCTGCAGCGCCGCCCATGGGATATCATCGAT 891
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||