These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12933#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 977 fasta sequence [AACAGAGAAGCATTTCCTCGAACACATCGCCGTCGCCGCCCTCCATGGCCGCTCCCACCGCAGCAGCTCTCTCCACCCTCTCCACCGCCAGCGTCACCTCCGGCAAGCGCTTCATCACCTCCTCCTTCTCCCTCTCCTTCTCCTCCCGCCCCCTCGCAACAGGCGTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC-GTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA-CGCCAAGGGGGTGGACGCCATCGCCTGCGTGTCGGTGAAC-GACGC-GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACG-CCGACGTGCTCCTCCTC-TCCG-ACGGCAACCTGGAGCTCAC-G-CG-CGCGCT-CGGC-GTCGA-----GATGGACCTCTCCGACAAGCCCATGGGGCT-C-GGC-GTCA-GGTC-GCG-CC-GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA-AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAAAACTACTTTTATTTTTTTGTTGAAAAAAAAAAACCATGTGTTTGACGAAATGTCGAGATATGAAAGCTGTGAAATCGCTTACGT] [+] EMBL AK065909 [AACAGAGAAGCATTTCCTCGAACACATCGCCGTCGCCGCCCTCCATGGCCGCTCCCACCGCAGCAGCTCTCTCCACCCTCTCCACCGCCAGCGTCACCTCCGGCAAGCGCTTCATCACCTCCTCCTTCTCCCTCTCCTTCTCCTCCCGCCCCCTCGCAACAGGCGTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC GTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATTGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACG CCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGC GTCGA GATGGACCTCTCCGACAAGCCCATGGGGCT C GGC GTCA GGTC GCG CC GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAA ] [+] EMBL AK061629 [ CAGAGAAGCATTTCCTCGAACACATCGCCGTCGCCGCCCTCCATGGCCGCTCCCACCGCAGCAGCTCTCTCCACCCTCTCCACCGCCAGCGTCACCTCCGGCAAGCGCTTCATCACCTCCTCCTTCTCCCTCTCCTTCTCCTCCCGCCCCCTCGCAACAGGCGTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC GTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATTGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACG CCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGC GTCGA GATGGACCTCTCCGACAAGCCCATGGGGCT C GGC GTCA GGTC GCG CC GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAAAACTACTTTTATTTTTTTGTTGAAATTTGCAAACCATGTGTTTGACGAAATGTCGAGATATGAAAGCTGTGAAATCGCTTACGT] [+] EMBL AA754428 [ cgagatthnCCNCGAACACATCGCCGTCGCCGCCCTCCATGGCCGNTHCCACCGCAGCAGCTCTCTCCACCCTCTCCGCCGCCAGCGTCACCTCCGGCAAGCGCTTCATCACCTCCTCCTTCTCCCTCTCCTTCTCCTCCCGCCCCCTCGCAACAGGCGTCCGCGCCGC GGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGSTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGA STGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC GTTCACG CGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATCGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTYGGCGACG CCACCGTTCT ] [+] EMBL BE230249 [ GGCGTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC GTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATCGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACG CCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGC GTCGAGNGGGGATGGACCTCTCCGACAAGCCCATGGGGCT C GGC GTCA GGTC GCG CC GTTACTCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCT ] [+] EMBL BE230554 [ GGCGTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC GTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATCGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAAGAGAGCCTGGGCCTCGGCGACG CCGACG ] [+] EMBL BM038665 [ CTGAC GC GGCAGGAA GCGGT CTGTTCGCGGTNCCCGGCGCTGTTCAC CCGACGTGCTCGCAGAAGCACCTCC GGGTTCATCGAGAA GCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATCGCCTGCGT TCGGTGAAC GACGCAGTTCGTGATGCGCGCGTGGAAGGAGAGCCT GGCCTCGGCGACG CCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGCAGTCGA GATGGACCTCTCCGACAAGCCCATGGGGCT C GGC GTCA GGTC GCG CCAGCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAGGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCAT CCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAAAACTACTTT TTTTTTT AAAAAAAAAAA ] [+] EMBL BM419893 [ CGGGGTTCATCGAGAA GCCGGGGAGCTCCACCGCCAA GGGGT GACGCCATCGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCT GGCCTCGGCGACN CCGACGTGCTCCTCCTCTTCCGTACGGCAACCTGGAGCTCACAG CG CGCGCT CGGC GTCGA GATGGACCTCTCCGACAAGCCCATGGGGCT CAGGCAGTCA GGTCTGCGTCC GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAGGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAAC AAAGAAACAAAACTACTTTT TTTTTTGTTTGAAAAAAAA ] [+] EMBL BQ908123 [ TCGCCTGCGTGTCGGTGAACNGACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACGNCCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGC GTCGA GATGGACCTCTCCGACAAGCCCATGGGGCT C GGC GTCA GGTC GCG CC GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAGGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACCAAAGAAAAAAAACTACTTTT TTTTTTTGTTGAAAAAAAAAA ] [+] EMBL BI805097 [ TGTCGGTG AC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCT GGCCTCGGCGACG CCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGC GTCGA GATGGACCTCTCCGACCAGCCCCTGGGGCT C GGC GTCACGGTC GCC CC GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACCATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACCAAAGAAAAAAAACTACTTTTATTTTTTTGTTGAAAAAAAAAc ] [+] EMBL AU075540 [ gaagntTCAC GTCGACGCGCTNCGGC GTCGA GATGGACCTCTCCGACAAGCCCATGGGGCTNC GGC GTCA GGTC G C GCTACGCGCTCCTCGCCGANGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAAAACTACTTTTAaa ] [+] EMBL AU070372 [ tGTCANAGGTGCTCAACCTCGAGGAGGGCGGCG CTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTNACGAAATGACGGAATAACAAAAGAAAAAAAACTACTTTNATTTTTTTGTTGAAAAAAAAAAAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||