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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12935#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1785 fasta sequence
[GGAGAGCTCCGGCTTTTCTTTTCCATCTCGACCTTGCCGCCGGCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCGTGGTCGTCTCCTCTCTTCTACCGTTCCATAATTTCCTCATCATGCCGATCATCTTCTATTTTGACACCACGTCATTTCATCCACTGCAGCCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCACTGGACGCCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGAACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATCCAATGGCGCAGCGATCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGCTTCCATCATCGATTCCATTCTCTCCGGTGAGCGTCAGTCAAATTCCATGCATGAATAGCCTCCCTAGATAGCTTTTGACCTCTTGCATGCACCGTACTAGTGACTCCCCTTACAGATCGAGCAGCCGACGTCATTCCTGGAGTTGTGCCATGCCGCCATGGAGCTTCGCCGTCGCTGTGGCTCTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGATTTAGATGCTGACATTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTG-AGTGATGCGGGTAATCGACTGCTTCTTCT-AGGACTTGGAACTTAATGGGGGTAAACCCCTAGTCGGTGTGCTTGTGGTTTGGGTAGACAAGCTTCCGTT-GTTCTCTTA-TATATCTATTTGGCCGGTCGGCCT-ATGTAACTATTAAGTTGATTTAAGTCTTTAAGTTCTTTTCTTCAAGTTGATGTAAGTCTTTAAGTCCTTTTCTTCTTAAATGTGTCTGCTATGTATGTCCATGCTTAAGATGAAAGTGTGAATCTAGTGTATATCCTGGGAACTAGATTCACATGAGTATGAGTTAAGAATATTTGAGATGTTGTAGATCTTTAACTA-TTTTGTCAAGTAAAAAAAATGTGTAACACATCTGGTCGTGGCCTTCGAGTTGTTTAACGGGCGCATCTCAGTTTGAAGTTGACGGGCAGGTTAAAGGCCCCACAATATTTTCAATATTCTTCTATTAAGACGTCGGATATTTTATTATATTTGTTTGATGACTTGAATTATTTACTTTATCCCTTAAATATAATGAAAGGTCGGAGAGCCTACGACCTACCCGCGGCCTACAGCTTCCGTCAACCCGCCTTCGTTGCGAAGTTTGTCTCCCTCCTCATCGCTGACGCCCAGGACGTCCCCACGCTCGCCTACCAGCTCCTCCTCGTCTCATCTGCTGCATGCCTCCTCCGCTTCATCGGCAGCCACATCACGCGGCAGGTGGAGGGGACTGTGCTTATGCACGTCACCCTCGCAGACAAGCAGGAACACGCGCTGGCAAGGGAGGTTGTGGTCGCCATCAAGGCTGACGCGGGTGGGACGTTCCGTAGATTCGCGGTGGTTGTTCTACTGTCTGTGGAGGTTTAATGACGACGCCGTGGGCATGCTCTGGGACGCTGTTTATTTTCTGTTAAGGAGATCAGTACCTTTTCAGTCTTCAGGGTGTGAATATATACAAGATATGTTGATATAACCTGTAGAAGACTCATTTATTTTGAGTACTCCAGTAGCTATCACTCCTCGCTAGGTCATATATATAGTATGTTTCTGGTAATTTTGATTGAACTAATTAATGATCTGTGACTGTTGCATGTATAGTTTGTAAGCTGCAACCAGTG]
[+] EMBL CF326469 [GGAGAGCTCCGGCTTTTCTTTTCCATCTCGACCTTGCCGCCGGCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCGTGGTCGTCTCCTCTCTTCTACCGTTCCATAATTTCCTCATCATGCCGATCATCTTCTATTTTGACACCACGTCATTTCATCCACTGCAGCCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCACTGGACGCCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGAACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATCCAATGGCGCAGCGATCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGCTTCCATCATCGATTCCATTCTCTCCGGTGAGCGTCAGTCAAATTCCATGCATGAATAGCCTCCCTAGATAGCTTTTGACCTCTTGCATGCACCGTACTAGTGACTCCCCTTACAGATCGAGCAGCCGACGTCATTCCTGGAGTTGTGCCATGCCGCCATGGAGCTTCGCCGTCGCTGTGGCTCTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGATTTAGATGCTGACATTTTCCTGATTCAAGGTTTTAGATTTAGTCTTT ]
[+] EMBL AU078077 [ GCTTTTCTTTTCCATCTCGACCTTGCCGCCGGCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCGTGGTCGTCTCCTCTCTTCTACCGTTCCATAATTTCCTCATCATGCCGATCATCTTCTATTTTGACACCACGTCATTTCATCCACTGCAGCCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCACTGGACGCCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGAACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATCCAATGGCGCA NGATCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGCTTCCATCATCGATTCCATTCTCTCCGGTGAGCGTCAGTCAAATTCCATGCATGAATAGCCTCCCTAGATAGCTTTTGACCTCTTGCATGCACCGTACTAGTGACTCCCCTTACAGATCGAGCAGCCGACGTCATTCCTGGAGTTGTGCCATGCCGCCATGGAGCTTCGCCGTCGCTGTGGCTCTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGATTTAGATGCTGACATTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTGAAGTGATGCGGGTAATCGAATGCTTCTTCTAAGGA TTGGNAATTAATGGGGGTAAAACCCTAATCGGTGTGCTTGTGGNTTGGGTAAANAAG TTCCGTTGGTCCNCTTANAAAACCNATTTGGCCGGTTCGCCTAAGGNAACTATTA ]
[+] EMBL AU078076 [ CTTCAAGAT CCCCAAGAAACCCCATCCAATGGCGCAGCGATCTTGGAGATCGACATCGTGTTCTCNAACTCCATTCAATCGCTNCCATCATCGATTCCATTCTCTCCGGTGAGCGTCAGTCAAATTCCATGCATGAATAGCCTCCCTAGATAGCTTTTGACCTCTTGCATGCACCGTACTAGTGACTCCCCTTACAGATCGAGCAGCCGACGTCATTCCTGGAGTTGTGCCATGCCGCCATGGA NTTCGCCGTCGCTGTGGCTCTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGATTTAGATGCTGACATTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTG AGTGATGCGGGTAATCGACTGCTTCTTCT AGGACTTGGAACTTAATGGGGGTAAACCCCTAGTCGGTGTGCTTGTGGTTTGGGTAGACAAGCTTCCGTT GTTCTCTTA TATATCTATTTGGCCGGTCGGCCT ATGTAACTATTAAGTTGATTTAAGTCTTTAAGTTCTTTTCTTCAAGTTGATGTAAGTCTTTAAGTCCTTTTCTTCTTAAATGTGTCTGCTATGTATGTCCATGCTTAAGATGAAAGTGTGAATCTAGTGTATATCCTGGGAACTAGATTCACATGAGTATGAGTTAAGAATATTTGAGATGTTGTAGATCTTTAACTATTTTTGTCAAGTAAAAAAAA ]
[-] EMBL CF296162 [ TTTAGATTTAGTCTTTG AGTGATGCGGGTAATCGACTGCTTCTTCT AGGACTTGGAACTTAATGGGGGTAAACCCCTAGTCGGTGTGCTTGTGGTTTGGGTAGACAAGCTTCCGTT GTTCTCTTA TATATCTATTTGGCCGGTCGGCCT ATGTAACTATTAAGTTGATTTAAGTCTTTAAGTTATTTTCTTCAAGTTGATGTAAGTCTATAAGTCCTTTTCTTCTTAAATGTGTCTGCTATGTATGTCCATGCTTAAGATGAAAGTGTGAATCTAGTGTATATCCTGGGAACTAGATTCACATGAGTATGAGTTAAGAATATTTGAGATGTTGTAGATCTTTAACTA TTT ]
[+] EMBL AK111406 [ ATTCATATGAGTATGAGTTAAGAATATTTGAGATGTTGTAGATCTTTAGCTA TTTTGTCAAGTCTCCTAAATGTGTAACACATCTGGTCGTGGCCTTCGAGTTGTTTAACGGGCGCATCTCAGTTTGAAGTTGACGGGCAGGTTAAAGGCCCCACAATATTTTCAATATTCTTCTATTAAGACGTCGGATATTTTATTATATTTGTTTGATGACTTGAATTATTTACTTTATCCCTTAAATATAATGAAAGGTCGGAGAGCCTACGACCTACCCGCGGCCTACAGCTTCCGTCAACCCGCCTTCGTTGCGAAGTTTGTCTCCCTCCTCATCGCTGACGCCCAGGACGTCCCCACGCTCGCCTACCAGCTCCTCCTCGTCTCATCTGCTGCATGCCTCCTCCGCTTCATCGGCAGCCACATCACGCGGCAGGTGGAGGGGACTGTGCTTATGCACGTCACCCTCGCAGACAAGCAGGAACACGCGCTGGCAAGGGAGGTTGTGGTCGCCATCAAGGCTGACGCGGGTGGGACGTTCCGTAGATTCGCGGTGGTTGTTCTACTGTCTGTGGAGGTTTAATGACGACGCCGTGGGCATGCTCTGGGACGCTGTTTATTTTCTGTTAAGGAGATCAGTACCTTTTCAGTCTTCAGGGTGTGAATATATACAAGATATGTTGATATAACCTGTAGAAGACTCATTTATTTTGAGTACTCCAGTAGCTATCACTCCTCGCTAGGTCATATATATAGTATGTTTCTGGTAATTTTGATTGAACTAATTAATGATCTGTGACTGTTGCATGTATAGTTTGTAAGCTGCAACCAGTG]
consensusID : consensus_12935#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 848 fasta sequence
[GCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCGTGCCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCACTGGACGCCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGAACCCTTG-CGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATCCAATGGCGCAGCGATCTTGGAGATC-GACATCGTGTTCTCCAACTCCATTCAATCGCTTCCATCATCGATTCCATTCTCTCCGTGACTCCCCTTACAGATCGAGCAGCCGACGTCATTCCTGGAGTTGTGCCATGCCGCCATGGAGCTTCGCCGTC-GCTGTGGCTCTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGATTTAGATGCTGACA-TTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTGAGTGATGCGGGTAATCGACTGCTTCTTCTAGGACTTGGAACTTAATGGGGGTAAACCCCTAGTCGGTGTGCTTGTGGTTTGGGTAGACAAGCTTCCGTTGTTCTCTTATATATCTATTTGG-CCGGTCGGCCTATGTAACTATT-AAGTTGA-TTTAAGTCTTTAAGTTC-TTTTC-TTCAAGTTGATGTAAGTCTTTAAGTCCTTTTCTTCTTAAATGTGTCTGCTATGTATGTCCATGCTTAAGATGAAAGTGTGAATCTAGTGTATATCCTGGGAACTAGATTCACATGAGTATGAGTTAAGAATATTTGAGATGTTGTAGATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN]
[+] EMBL AU078109 [GCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCGTGCCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCACTGGACGCCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGAACCCTTG CGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATCCAATGGCGCAGCGATCTTGGAGATC GACATCGTGTTCTCCAACTCCATTCAATCGCTTCCATCATCGATTCCATTCTCTCCGTGACTCCCCTTACAGATCGAGCAGCCGACGTCATTCCTGGAGTTGTGCCATGCCGCCATGGAGCTTCGCCGTC GCTGTGGCTCTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGATTTAGATGCTGACA TTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTGAGTGATGCGGGTAATCGACTGCTTCTTCTAGGACTTGGAACTTAATGGGGGTAAACCCCTAGTCGGTGTGCTTGTGGTTTGGGTAGACAAGCTTCCGNTGGTCTCTTATATATCTATTTGGCCCGGTCGGCCTATGTAACTATTAAAGTTGA TTTAAGTCTTTAAGTTCTTTTTCTTTAAAGTTGATGTA ]
[+] EMBL AU078110 [ CCCAAGCCGAACCCTTGNGGCCACCAGGATCACCTCGACGTCCTTTTCAAGATACCCCAAGAAAACCCATCCAATGGCGCAGCGATCTTGGAGATCGGACATCGTGTTCTCCAACTCCATTCAATNGCTTCCATCATCGATTCCATTCTCTCCGTGACTCCCCTTACAGATCGAGCAGCCGACGTCATTCCTGGAGTTGTGCCATGCCGCCATGGAGCTTCGCCGTC GCTGTGGCTCTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGATTTAGATGCTGACA TTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTGAGTGATGCGGGTAATCGACTGCTTCTTCTAGGACTTGGAACTTAATGGGGGTAAACCCCTAGTCGGTGTGCTTGTGGTTTGGGTAGACAAGCTTCCGTTGTTCTCTTATATATCTATTTGG CCGGTCGGCCTATGTAACTATT AAGTTGA TTTAAGTCTTTAAGTTC TTTTC TTCAAGTTGATGTAAGTCTTTAAGTCCTTTTCTTCTTAAATGTGTCTGCTATGTATGTCCATGCTTAAGATGAAAGTGTGAATCTAGTGTATATCCTGGGAACTAGATTCACATGAGTATGAGTTAAGAATATTTGAGATGTTGTAGATCTTTAAAAAAAAAAAAAAAAA ]
[+] EMBL BI809891 [ GTGACTCCCCTTACAGATCGA CAGCCGACGTCATTCCTGGAGTTGT CCAT CCGCCATGGAGCTTC CCGTCAGCTGTGGCTCTGCAGACATCCCTAGCCTTGTCTAGAATCTCGATGATTGCTTAAACGGTGAAGAAGTGATTTAGATGCTGACACTTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTGAGTGATGCGGGTAATCGACTGCTTCTTCTAGGACTTGGAACTTAATGGGGGTAAACCCCTAGTTGGTGTGCTTGTGGTTTGGGTAGATAAGCTTCCCTTGTTCTCTTATATATCTATTTGG CCGGTCGGCCTATGTAACTATT AAGTTGACTTTAAGTCTTTAAGTTC TTTTC TTCAAGTTGATGTAAGTCTTTAAGTCCTTTTCTTCTTAAATGTGTCTGCTATGTATGTCCATGCTTAAGATGAAAGTGTGAATCTAGTGTACATCCTGGGAACTAGATTCACATGAGTATGAGTTAAGAATATTTGAGATGTTGTAGATCTTTAAAAAA ]
[+] EMBL AU057255 [ CCTTTTCTTCTTAAATGTGTCTGCTATGTATGTCCATGCTTAAGATGAAAGTGTGAATCTAGTGTATATCCTGGGAACTAGATTCACATGAGTATGAGTTAAGAATATTTGAGATGTTGTAGATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN]
consensusID : consensus_12935#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 632 fasta sequence
[TCCTGAGCCGAGCAAACCGAGGGGGAGAGCTCCGGCTTTTCTTTTCCATCTCGACCTTGCCGCCGGCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCGTGGTCGTCTCCTCTCTTCTACCGTTCCATAATTTCCTCATCATGCCGATCATCTTCTATTTTGACACCACGTCATTTCATCCACTGCAGCCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCACTGGACGCCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGAACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATCCAATGGCGCAGCGATCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGCTTCCATCATCGATTCCATTCTCTCCGATCGAGCAGCCGACGTCATTCCTGGGAGTTGTGCCATGCCGCCATGGACTNNTCGCCGTCGCTGTGGCTCTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGATTTAGATGCTGACATTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTGAGTGATGCGGGTAATCG]
[+] EMBL CF308596 [TCCTGAGCCGAGCAAACCGAGGGGGAGAGCTCCGGCTTTTCTTTTCCATCTCGACCTTGCCGCCGGCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCGTGGTCGTCTCCTCTCTTCTACCGTTCCATAATTTCCTCATCATGCCGATCATCTTCTATTTTGACACCACGTCATTTCATCCACTGCAGCCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCACTGGACGCCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGAACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATCCAATGGCGCAGCGATCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGCTTCCATCATCGATTCCATTCTCTCCGATCGAGCAGCCGACGTCATTCCTGGGAGTTGTGCCATGCCGCCATGGACTNNTCGCCGTCGCTGTGGCTCTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGATTTAGATGCTGACATTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTGAGTGATGCGGGTAATCG]
consensusID : consensus_12935#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 325 fasta sequence
[CCATCTCGACCTTGCCGCCGGCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCCCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCACTGGACGNCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGAACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATCCAATGGCGCAGGATTCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGNTTCCATCATCGATTCCATTCTCTCCGATCGAGCAGNCGACGTCATTCC]
[+] EMBL C28388 [CCATCTCGACCTTGCCGCCGGCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCCCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCACTGGACGNCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGAACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATCCAATGGCGCAGGATTCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGNTTCCATCATCGATTCCATTCTCTCCGATCGAGCAGNCGACGTCATTCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 -----------------------GGAGAGCTCCGGCTTTTCTTTTCCATCTCGACCTTGC 37
consensus_12935#2 TCCTGAGCCGAGCAAACCGAGGGGGAGAGCTCCGGCTTTTCTTTTCCATCTCGACCTTGC 60
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 CGCCGGCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCGTGGTCGTCTCCTCTCT 97
consensus_12935#2 CGCCGGCCGTGAAGACGACGGCCGTTGCCATCGCCATTGTGCCGTGGTCGTCTCCTCTCT 120
consensus_12935#1 -----------------------------------GCCGTGAAGACGACGGC-CGTTGCC 24
consensus_12935#3 ---------------CCATCTCGACCTTGCCGCCGGCCGTGAAGACGACGGC-CGTTGCC 44
consensus_12935#0 TCTACCGTTCCATAATTTCCTCATCATGCCGATCATCTTCTATTTTGACACCACGTCATT 157
consensus_12935#2 TCTACCGTTCCATAATTTCCTCATCATGCCGATCATCTTCTATTTTGACACCACGTCATT 180
* * *** * ***
consensus_12935#1 ATCGCCATTGTGCCGTGCCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCA 84
consensus_12935#3 ATCGCCATTGTGCC---CCACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCA 101
consensus_12935#0 TCATCCACTGCAGC----CACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCA 213
consensus_12935#2 TCATCCACTGCAGC----CACGGGAACGCAGAGCTCGCCGACGATGCTCTGGAGCGCGCA 236
*** ** * ******************************************
consensus_12935#1 CTGGACGCCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGA 144
consensus_12935#3 CTGGACGNCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGA 161
consensus_12935#0 CTGGACGCCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGA 273
consensus_12935#2 CTGGACGCCGTCATCGGGTTCTCATCGTCGTTCCGACCGAACCGAACCACCCCAAGCCGA 296
******* ****************************************************
consensus_12935#1 ACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATC 204
consensus_12935#3 ACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATC 221
consensus_12935#0 ACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATC 333
consensus_12935#2 ACCCTTGCGCCACCAGGATCACCTCGACGTCCTCTTCAAGATACCCCAAGAAAACCCATC 356
************************************************************
consensus_12935#1 CAATGGCGCAGCGATCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGCTTCC 264
consensus_12935#3 CAATGGCGCAGGATTCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGNTTCC 281
consensus_12935#0 CAATGGCGCAGCGATCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGCTTCC 393
consensus_12935#2 CAATGGCGCAGCGATCTTGGAGATCGACATCGTGTTCTCCAACTCCATTCAATCGCTTCC 416
*********** ***************************************** ****
consensus_12935#1 ATCATCGATTCCATTCTCTCCGTGACTCCCCTTACAG----------------------- 301
consensus_12935#3 ATCATCGATTCCATTCTCTCCG-------------------------------------- 303
consensus_12935#0 ATCATCGATTCCATTCTCTCCGGTGAGCGTCAGTCAAATTCCATGCATGAATAGCCTCCC 453
consensus_12935#2 ATCATCGATTCCATTCTCTCCG-------------------------------------- 438
**********************
consensus_12935#1 ---------------------------------------------------ATCGAGCAG 310
consensus_12935#3 ---------------------------------------------------ATCGAGCAG 312
consensus_12935#0 TAGATAGCTTTTGACCTCTTGCATGCACCGTACTAGTGACTCCCCTTACAGATCGAGCAG 513
consensus_12935#2 ---------------------------------------------------ATCGAGCAG 447
*********
consensus_12935#1 CCGACGTCATTCCTGG-AGTTGTGCCATGCCGCCATGGAG-CTTCGCCGTCGCTGTGGCT 368
consensus_12935#3 NCGACGTCATTCC----------------------------------------------- 325
consensus_12935#0 CCGACGTCATTCCTGG-AGTTGTGCCATGCCGCCATGGAG-CTTCGCCGTCGCTGTGGCT 571
consensus_12935#2 CCGACGTCATTCCTGGGAGTTGTGCCATGCCGCCATGGACTNNTCGCCGTCGCTGTGGCT 507
************
consensus_12935#1 CTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGA 428
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 CTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGA 631
consensus_12935#2 CTGCAGACATCCCTAGCCTTGTCTAGCATCTCGATGATTGCTTAAACGGTAAAGAAGTGA 567
consensus_12935#1 TTTAGATGCTGACATTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTGAGTGATGCGGGT 488
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 TTTAGATGCTGACATTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTGAGTGATGCGGGT 691
consensus_12935#2 TTTAGATGCTGACATTTTCCTGATTCAAGGTTTTAGATTTAGTCTTTGAGTGATGCGGGT 627
consensus_12935#1 AATCGACTGCTTCTTCTAGGACTTGGAACTTAATGGGGGTAAACCCCTAGTCGGTGTGCT 548
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 AATCGACTGCTTCTTCTAGGACTTGGAACTTAATGGGGGTAAACCCCTAGTCGGTGTGCT 751
consensus_12935#2 AATCG------------------------------------------------------- 632
consensus_12935#1 TGTGGTTTGGGTAGACAAGCTTCCGTTGTTCTCTTATATATCTATTTGGCCGGTCGGCCT 608
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 TGTGGTTTGGGTAGACAAGCTTCCGTTGTTCTCTTATATATCTATTTGGCCGGTCGGCCT 811
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ATGTAACTATTAAGTTGATTTAAGTCTTTAAGTTCTTTTCTTCAAGTTGATGTAAGTCTT 668
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 ATGTAACTATTAAGTTGATTTAAGTCTTTAAGTTCTTTTCTTCAAGTTGATGTAAGTCTT 871
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 TAAGTCCTTTTCTTCTTAAATGTGTCTGCTATGTATGTCCATGCTTAAGATGAAAGTGTG 728
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 TAAGTCCTTTTCTTCTTAAATGTGTCTGCTATGTATGTCCATGCTTAAGATGAAAGTGTG 931
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 AATCTAGTGTATATCCTGGGAACTAGATTCACATGAGTATGAGTTAAGAATATTTGAGAT 788
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 AATCTAGTGTATATCCTGGGAACTAGATTCACATGAGTATGAGTTAAGAATATTTGAGAT 991
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 GTTGTAGATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN 848
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 GTTGTAGATCTTTAACTATTTTGTCAAGTAAAAAAAATGTGTAACACATCTGGTCGTGGC 1051
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 CTTCGAGTTGTTTAACGGGCGCATCTCAGTTTGAAGTTGACGGGCAGGTTAAAGGCCCCA 1111
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 CAATATTTTCAATATTCTTCTATTAAGACGTCGGATATTTTATTATATTTGTTTGATGAC 1171
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 TTGAATTATTTACTTTATCCCTTAAATATAATGAAAGGTCGGAGAGCCTACGACCTACCC 1231
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 GCGGCCTACAGCTTCCGTCAACCCGCCTTCGTTGCGAAGTTTGTCTCCCTCCTCATCGCT 1291
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 GACGCCCAGGACGTCCCCACGCTCGCCTACCAGCTCCTCCTCGTCTCATCTGCTGCATGC 1351
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 CTCCTCCGCTTCATCGGCAGCCACATCACGCGGCAGGTGGAGGGGACTGTGCTTATGCAC 1411
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 GTCACCCTCGCAGACAAGCAGGAACACGCGCTGGCAAGGGAGGTTGTGGTCGCCATCAAG 1471
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 GCTGACGCGGGTGGGACGTTCCGTAGATTCGCGGTGGTTGTTCTACTGTCTGTGGAGGTT 1531
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 TAATGACGACGCCGTGGGCATGCTCTGGGACGCTGTTTATTTTCTGTTAAGGAGATCAGT 1591
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 ACCTTTTCAGTCTTCAGGGTGTGAATATATACAAGATATGTTGATATAACCTGTAGAAGA 1651
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 CTCATTTATTTTGAGTACTCCAGTAGCTATCACTCCTCGCTAGGTCATATATATAGTATG 1711
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 ------------------------------------------------------------
consensus_12935#3 ------------------------------------------------------------
consensus_12935#0 TTTCTGGTAATTTTGATTGAACTAATTAATGATCTGTGACTGTTGCATGTATAGTTTGTA 1771
consensus_12935#2 ------------------------------------------------------------
consensus_12935#1 --------------
consensus_12935#3 --------------
consensus_12935#0 AGCTGCAACCAGTG 1785
consensus_12935#2 --------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||