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Oryza sativa
cluster # 12942 cluster # 12942       Sequences # 11       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12942#0 length = 2187 sequences # 10  
 consensus_12942#1 length = 346 sequences # 1  
consensusID : consensus_12942#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2187
fasta sequence 
                              [CCTCCAACTCCGGCCGCCACCGACCCCCCTCGACACCCGACTCCCTCCATAAATTTCCCCCCCTCCCGCGGCCGCCGGGAGATCATCGCCGACGACAACCAGAGCAGAGGAGAGGGGAGGGGAACCCAAGCAAGCAATCAGCGTGGAATCGGATCGGGTACGAGGAGGAGGAGGAGGAGGGGGATGGATTTCGAGCTGCGCAAGGCGCGGGAGAAGCTGGAGCGGGAGCAGCGGGAGCGCGTGCAGCGCGCCAAGGACAAGGCCGACCGCGAGCGCCGCGCCAAGGCCGAGGCCGCGCGCCGCCGCGACGCGCTCGAGGCGTCCCACCGCGAGCGCCGCCTCGACGCCGCCCGCGCGCAGGAAGAGGCTCAGCAGAAGATGGAAGAGGTGATGCAACTTGGAAAGGGGATTTCTTTCTTGCACATGTTTGAAGCTCTTCGATATGATGGTCCTGGGGATAAGATCAAGTTGCCACCATCGTCTTTTAAGGAATTGTCTGATGAAGGAGCACTGGACAAAGGTCCCATGTACTTCAGGTTGTCAAAGGTTAGAGACAGTGTTCCGGGTGCCCCTCAGGATAATGATGCCGATGAGGCAACATGTTGTGGTGTTCTTGAGTTCACTGCAAGGGAAGGCTCCGCAGAACTCACTCCACATGTGTGGAACAATCTGTTCCGGGGTGATAGCCCAGATGTTCCTCTGATTGAGGTTAGGTATGTCAGTTTACCCAAAGGGACATATGCGAAGCTGA-AGCCAGAAGGAGTGGGGTTCTCAGACCTTCCTAACCATAGGGCTGTCCTTGAAACGGCACTCCGCAATCATGCAACACTATCTGAAAATGATTTTGTTGTGGTGAATTATGGGCAGCTGCAATACAAGTTGAAGGTTCTTGAATTAAAACCTGCATCAAGTGTTTCTGTCCTGGAGACAGATGTGGAAGTTGACATTGAAGGACCAGATTCAGTTTTGGACAACGTAG-AGAATCAACATGTGCTTGTGCCAC-TTGAGACTGG-AAAGGTTGAATC-TGG-AG-TTGTGGAAGAA-GGAAAG-TTTAGGTACTACAAATTTCTTGTTGATGAAGGTATGGGTGAGAAAGTAGCTTCTAGGCATGCAAATATTGAGGTTAAGATAGAGACATATACAAGTGGTGGTGACACTGATATTTATGTATCAAGGCATCCTTTAGTTTTCCCAACTCAGCACCGTCACGAATGGTCTTCTCATGAAATGGGATCTAAGGTCCTCATACTGAAACCAAGGGATGCCAGTCTCTCCAGTGGTACCTACAGTATTGGAGTTTATGGTTTCAAGGGAACCACTAAATACCAACTTTCTGTAGCTATTAAAGATGTTCTTAATGGCCAAAGGATTGGTGAGCAGGCTAGTGCCTCATCTAGTGTTGATGTTGATTCAGTGGTGTGCAAGAACTGCAAACGCTATATATCCAACCGAACTTCACTACTTCATGAAGCATACTGTGTGAGACACAATGTTGTTTGCATGCATGATGGGTGTGGTGTTGTTCTTCGAAAGGAGGAAGCAACAGATCACGTGCATTGCAACAAGTGTGGGCAAGCTTTCCAGCAGAGAGAAATGGAGAAGCACATGAAAGTTTTCCATGAGCCACTACAATGCCCTTGTGGGGTGGTCCTTGAAAAGGAAGATATGGTTCAACACCAATCCTCAACCTGCCCTTTGCGCTTGATTGTGTGCCGATTTTGTGGTGACACTGTTCAAGCTGGTGGAGAACCACTTGATGCTCGGGATCGGCTTCGCAACATGTGTGAGCACGAGAGTATCT-GTGGATCCAGGACTGCACCATGTGATTCTTGTGGACGGTCAGTCATGCTGAAGGACATGGACATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAAGATGGCCTGTCCTTTATCCTGCTGGGCTTTAACCAC-CAAGGCCATGAAGTTTCAGCACTGCTGGACCAAATGTTATTTCCTTTTGTGTTACATATATCTTGTGTCATTGGTTAAATTGTAACACTGCGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAACACAGTGGCGGTGTCTCCTTATGTATACACAAACCATCTATAATATTTGATTTGAGCTTTCTCATATTCAGGAGCTTTATTAGAAACTTTCATTAA]

[+] EMBL AK072168             [CCTCCAACTCCGGCCGCCACCGACCCCCCTCGACACCCGACTCCCTCCATAAATTTCCCCCCCTCCCGCGGCCGCCGGGAGATCATCGCCGACGACAACCAGAGCAGAGGAGAGGGGAGGGGAACCCAAGCAAGCAATCAGCGTGGAATCGGATCGGGTACGAGGAGGAGGAGGAGGAGGGGGATGGATTTCGAGCTGCGCAAGGCGCGGGAGAAGCTGGAGCGGGAGCAGCGGGAGCGCGTGCAGCGCGCCAAGGACAAGGCCGACCGCGAGCGCCGCGCCAAGGCCGAGGCCGCGCGCCGCCGCGACGCGCTCGAGGCGTCCCACCGCGAGCGCCGCCTCGACGCCGCCCGCGCGCAGGAAGAGGCTCAGCAGAAGATGGAAGAGGTGATGCAACTTGGAAAGGGGATTTCTTTCTTGCACATGTTTGTAGCTCTTCGATATGATGGTCCTGGGGATAAGATCAAGTTGCCACCATCGTCTTTTAAGGAATTGTCTGATGAAGGAGCACTGGACAAAGGTCCCATGTACTTCAGGTTGTCAAAGGTTAGAGACAGTGTTCCGGGTGCCCCTCAGGATAATGATGCCGATGAGGCAACATGTTGTGGTGTTCTTGAGTTCACTGCAAGGGAAGGCTCCGCAGAACTCACTCCACATGTGTGGAACAATCTGTTCCGGGGTGATAGCCCAGATGTTCCTCTGATTGAGGTTAGGTATGTCAGTTTACCCAAAGGGACATATGCGAAGCTGA AGCCAGAAGGAGTGGAGTTCTCAGACCTTCCTAACCATAGGGCTGTCCTTGAAACGGCACTCCGCAATCATGCAACACTATCTGAAAATGATTTTGTTGTGGTGAATTATGGGCAGCTGCAATACAAGTTGAAGGTTCTTGAATTAAAACCTGCATCAAGTGTTTCTGTCCTGGAGACAGATGTGGAAGTTGACATTGAAGGACCAGATTCAGTTTTGGACAACGTAG AGAATCAACATGTGCTTGTGCCAC TTGAGACTGG AAAGGTTGAATC TGG AG TTGTGGAAGAA GGAAAG TTTAGGTACTACAAATTTCTTGTTGATGAAGGTATGGGTGAGAAAGTAGCTTCTAGGCATGCAAATATTGAGGTTAAGATAGAGACATATACAAGTGGTGGTGACACTGATATTTATGTATCAAGGCATCCTTTAGTTTTCCCAACTCAGCACCGTCACGAATGGTCTTCTCATGAAATGGGATCTAAGGTCCTCATACTGAAACCAAGGGATGCCAGTCTCTCCAGTGGTACCTACAGTATTGGAGTTTATGGTTTCAAGGGAACCACTAAATACCAACTTTCTGTAGCTATTAAAGATGTTCTTAATGGCCAAAGGATTGGTGAGCAGGCTAGTGCCTCATCTAGTGTTGATGTTGATTCAGTGGTGTGCAAGAACTGCAAACGCTATATATCCAACCGAACTTCACTACTTCATGAAGCATACTGTGTGAGACACAATGTTGTTTGCATGCATGATGGGTGTGGTGTTGTTCTTCGAAAGGAGGAAGCAACAGATCACGTGCATTGCAACAAGTGTGGGCAAGCTTTCCAGCAGAGAGAAATGGAGAAGCACATGAAAGTTTTCCATGAGCCACTACAATGCCCTTGTGGGGTGGTCCTTGAAAAGGAAGATATGGTTCAACACCAATCCTCAACCTGCCCTTTGCGCTTGATTGTGTGCCGATTTTGTGGTGACACTGTTCAAGCTGGTGGAGAACCACTTGATGCTCGGGATCGGCTTCGCAACATGTGTGAGCACGAGAGTATCT GTGGATCCAGGACTGCACCATGTGATTCTTGTGGACGGTCAGTCATGCTGAAGGACATGGACATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAAGATGGCCTGTCCTTTATCCTGCTGGGCTTTAACCAC CAAGGCCATGAAGTTTCAGCACTGCTGGACCAAATGTTATTTCCTTTTGTGTTACATATATCTTGTGTCATTGGTTAAATTGTAACACTGCGTATGGGAGCTTGGAACACTGGGGCGGTGTATGGGAGTATGGAACACAGTGGCGGTGTCTCCTTATGTATACACAAACCATCTATAATATTTGATTT                                           ]
[+] EMBL AK104278             [                                                                                             GACAACCAGAGCAGAGGAGAGGGGAGGGGAACCCAAGCAAGCAATCAGCGTGGAATCGGATCGGGTACGAGGAGGAGGAGGAGGAGGGGGATGGATTTCGAGCTGCGCAAGGCGCGGGAGAAGCTGGAGCGGGAGCAGCGGGAGCGCGTGCAGCGCGCCAAGGACAAGGCCGACCGCGAGCGCCGCGCCAAGGCCGAGGCCGCGCGCCGCCGCGACGCGCTCGAGGCGTCCCACCGCGAGCGCCGCCTCGACGCCGCCCGCGCGCAGGAAGAGGCTCAGCAGAAGATGGAAGAGGTGATGCAACTTGGAAAGGGGATTTCTTTCTTGCACATGTTTGAAGCTCTTCGATATGATGGTCCTGGGGATAAGATCAAGTTGCCACCATCGTCTTTTAAGGAATTGTCTGATGAAGGAGCACTGGACAAAGGTCCCATGTACTTCAGGTTGTCAAAGGTTAGAGACAGTGTTCCGGGTGCCCCTCAGGATAATGATGCCGATGAGGCAACATGTTGTGGTGTTCTTGAGTTCACTGCAAGGGAAGGCTCCGCAGAACTCACTCCACATGTGTGGAACAATCTGTTCCGGGGTGATAGCCCAGATGTTCCTCTGATTGAGGTTAGGTATGTCAGTTTACCCAAAGGGACATATGCGAAGCTGA AGCCAGAAGGAGTGGGGTTCTCAGACCTTCCTAACCATAGGGCTGTCCTTGAAACGGCACTCCGCAATCATGCAACACTATCTGAAAATGATTTTGTTGTGGTGAATTATGGGCAGCTGCAATACAAGTTGAAGGTTCTTGAATTAAAACCTGCATCAAGTGTTTCTGTCCTGGAGACAGATGTGGAAGTTGACATTGAAGGACCAGATTCAGTTTTGGACAACGTAG AGAATCAACATGTGCTTGTGCCAC TTGAGACTGG AAAGGTTGAATC TGG AG TTGTGGAAGAA GGAAAG TTTAGGTACTACAAATTTCTTGTTGATGAAGGTATGGGTGAGAAAGTAGCTTCTAGGCATGCAAATATTGAGGTTAAGATAGAGACATATACAAGTGGTGGTGACACTGATATTTATGTATCAAGGCATCCTTTAGTTTTCCCAACTCAGCACCGTCACGAATGGTCTTCTCATGAAATGGGATCTAAGGTCCTCATACTGAAACCAAGGGATGCCAGTCTCTCCAGTGGTACCTACAGTATTGGAGTTTATGGTTTCAAGGGAACCACTAAATACCAACTTTCTGTAGCTATTAAAGATGTTCTTAATGGCCAAAGGATTGGTGAGCAGGCTAGTGCCTCATCTAGTGTTGATGTTGATTCAGTGGTGTGCAAGAACTGCAAACGCTATATATCCAACCGAACTTCGCTACTTCATGAAGCATACTGTGTGAGACACAATGTTGTTTGCATGCATGATGGGTGTGGTGTTGTTCTTCGAAAGGAGGAAGCAACAGATCACGTGCATTGCAACAAGTGAGGGCAAGCTTTCCAGCAGAGAGAAATGGAGAAGCACATGAAAGTTTTCCATGAGCCACTACAATGCCCTTGTGGGGTGGTCCTTGAAAAGGAAGATATGGTTCAACACCAATCCTCAACCTGCCCTTTGCGCTTGATTGTGTGCCGATTTTGTGGTGACACTGTTCAAGCTGGTGGAGAACCACTTGATGCTCGGGATCGGCTTCGCAACATGTGTGAGCACGAGAGTACCT GTGGATCCAGGACTGCACCATGTGATTCTTGTGGACGGTCAGTCATGCTGAAGGACATGGACATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAAGATGGCCTGTCCTTTATCCTGCTGGGCTTTAACCAC CAAGGCCATGAAGTTTCAGCACTGCTGGACCAAATGTTATTTCCTTTTGTGTTACATATATCTTGTGTCATTGGTTAAATTGTAACACTGCGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAACACAGTGGCGGTGTCTCCTTATGTATACACAAACCATCTATAATATTTGATTTGAGCTTTCTCATATTCAGGA                       ]
[+] EMBL CF322827             [                                                                                                                                                                                                                                                                                                                                                                                                               GGAAAGGGGATTTCTTTCTTGCACATGTTTGAAGCTCTTCGATATGATGGTCCTGGGGATAAGATCAAGTTGCCACCATCGTCTTTTTTTGAATTGTCTGATGAAGGAGCACTGGACAAAGGTCCCATGTACTTCAGGTTGTCAAAGGTTAGAGACAGTGTTCCGGGTGCCCCTCAGGATAATGATGCCGATGAGGCAACATGTTGTGGTGTTCTTGAGTTCACTGCAAGGGAAGGCTCCGCAGAACTCACTCCACATGTGTGGAACAATCTGTTCCGGGGTGATAGCCCAGATGTTCCTCTGATTGAGGTTAGGTATGTCAGTTTACCCAAAGGGACATATGCGAAGCTGA AGCCAGAAGGAGTGGGGTTCTCAGACCTTCCTAACCATAGGGCTGTCCTTGAAACGGCACTCCGCAATCATGCAACACTATCTGAAAATGATTTTGTTGTGGTGAATTATGGGCAGCTGCAATACAAGTTGAAGGTTCTTGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU032306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCCAAAGGGACATATGCGAA NTGANAGCCAGAAGGAGTGGGGTTCTCAGACCTTCCTAACCATAGGGCTGTCCTTGAAACGGCACTCCGCAATCATGCAACACTATCTGANAATGATTTTGTTGTGGTGAATTATGGGCAGCTGCAATACAAGTTGAAGGTTCTTGAATTAAAACCTGCATCAAGTGTTTCTGTCCTGGAGACAGATGTGGAAGTTGACATTGAAGGACCAGATTCAGTTTTGGACAACGTAGAAGAATCCACATGTGCNTGTGCCACTTTGAGACTGGAAAAGGTTGAATCNTGGAAGTTTGTGGAAGAAGGGAAAGTTTTAGGTACTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSC111771            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGCAATACAAGTTGAAGGTTCTTGAATTAAAACCTGCATCAAGTGTTTCTGTCCTGGAGACAGATGTGGAAGTTGACATTGAAGGACCAGATTCAGTTTTGGACAACGTAG AGAATCAACATGTGCTTGTGCCAC TTGAGACTGG AAAGGTTGAATC TGG AG TTGTGGAAGAA GGAAAG TTTAGGTACTACAAATTTCTTGTTGATGAAGGTATGGGTGAGAAAGTAGCTTCTAGGCATGCAAATATTGAGGTTAAGATAGAGACATATACAAGTGGTGGTGACACTGATATTTATGTATCAAGGCATCCTTTAGTTTTCCCAACTCAGCACCGTCACGAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BP185087             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGTGAGAAAGTAGCTTCTAGGCATGCAAATATTGAGGTTAAGATAGAGACATATACAAGTGGTGGTGACACTGATATTTATGTATCAAGGCATCCTTTAGTTTTCCCAACTCAGCACCGTCACGAATGGTCTTCTCATGAAATGGGATCTAAGGTCCTCATACTGAAACCAAGGGATGCCAGTCTCTCCAGTGGTACCTACAGTATTGGAGTTTATGGTTTCAAGGGAACCACTAAATACCAACTTTCTGTAGCTATTAAAGATGTTCTTAATGGCCAAAGGATTGGTGAGCAGGCTAGTGCCTCATCTAGTGTTGATGTTGATTCAGTGGTGTGCAAGAACTGCAAACGCTATATATCCAACCGAACTTCACTACTTCATGAAGCATACTGTGTGAGACACAATGTTGTTTGCATGCATGATGGGTGTGGTGTTGTTCTTCGAAAGGAGGAAGCAACAGATCACGTGCATTGCAACAAGTGTGGGCAAGCTTTCCAGCAGAGAGAAATGGAGAAGCACATGAAAGTTTTCCATGAGCCACTACAATGCCCTTGTGGGGTGGTCCTTGAAAAGGAAGATATGGTTCAACACCAATCCTCAACCTGCCCTTTGCGCTTGATTGTGTGCCGATTTTGTGGTGACACTGTTCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB631774             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTGGTGTGCAAGAACTGCAAACGCTATATATCCAACCGAACTTCACTACTTCATGAAGCATACTGTGTGAGACACAATGTTGTTTGCATGCATGATGGGTGTGGTGTTGTTCTTCGAAAGGAGGAAGCAACAGATCACGTGCATTGCAACAAGTGTGGGCAAGCTTTCCAGCAGAGAGAAATGGAGAAGCACATGAAAGTTTTCCATGAGCCACTACAATGCCCTTGTGGGGTGGTCCTTGAAAAGGAAGATATGGTTCAACACCAATCCTCAACCTGCCCTTTGCGCTTGATTGTGTGCCGATTTTGTGGTGACACTGTTCAAGCTGGTGGAGAACCACTTGATGCTCGGGATCGGCTTCGCAACATGTGTGAGCACGAGAGTATCT GTGGATCTAGGACTGCACCATGTGATTCTTGTGGACGGTCAGTCATGCTGAAGGACATGGACATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAAGATGGCCTGTCCTTTATCCTGCTGGGCTTTAACCAC CAAGGCCATGAAGTTTCAGCACTGCTGGACCAAATGTTATTTCCTTTTGTGTTACATGTATCTTGTGTCATTGGTTAAATTGTAACACTGTGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAACACAGTGGCGGTGTCTCCTTATGTATACACAAACCATCTATAATATTTGATTTGAGCTTTCTCATATTCAGGAGCTTTATTAGAAACTTTCATT  ]
[+] EMBL AU032307             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTTGATTGTGTNCCGATTTTGTGGTGACACTGTTCAAGCTGNTGGAGAACCACTTGATGCTCGGGATCGGGTTCGCAACATGTGTGAGCACGAGAGTATCTNGTGGATCCAGGACTGCACCATGTGATTCTTGTGGACGGTCAGTCATGCTGAAGGACATGGACATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAAGATGGCCTGTCCTTTATCCTGCTGGGCTTTAACCAC CAAGGCCATGAAGTTTCAGCACTGCTGGACCAAATGTTATTTCCTTTTGTGTTACATATATCTTGTGTCATTGGTTAAATTGTAACACTGCGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAACACAGTGGCGGTGTCTCCTTATGTATACACAAACCATCTATAATATTTGATTTGAGCTTTCTCATATTCAGGNGCTTTATTACNAACTTTCAaaaa]
[+] EMBL C97788               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         agCATGCTGAAGGACATGGACATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAAGATGGCCTGTCCTTTATCCTGCTGGGCTTTAACCAC CAAGGCCATGAAGTTTCAGCACTGCTGGACCAAATGNTATTTCCTTTTGTGTTACATATATCTTGTGTCATTGGTTAAATTGTAACACTGCGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAACACAGTGGCGGTGTCNCCTTATGTATACACAAACCATCTATNACATATGATTTGAGCTTTCTCnnaaaaa                          ]
[+] EMBL C98468               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCTTTANCCTGCTGGGCTTTAACCACACAAGGCCATGAAGTTTCAGCACTNCTGGACCAAATGNTANTTCCTTTTGTGTTACATATANCTTGTGTCATTGGTTAAANTGTAACACTGCGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAANACAGTGGCGGTGTCTCCTTATGTATACANAAACCATCTATTATATTTGATTTGAGCTTTCTttnaaa                            ]




>consensus_12942#0
CCTCCAACTCCGGCCGCCACCGACCCCCCTCGACACCCGACTCCCTCCATAAATTTCCCC
CCCTCCCGCGGCCGCCGGGAGATCATCGCCGACGACAACCAGAGCAGAGGAGAGGGGAGG
GGAACCCAAGCAAGCAATCAGCGTGGAATCGGATCGGGTACGAGGAGGAGGAGGAGGAGG
GGGATGGATTTCGAGCTGCGCAAGGCGCGGGAGAAGCTGGAGCGGGAGCAGCGGGAGCGC
GTGCAGCGCGCCAAGGACAAGGCCGACCGCGAGCGCCGCGCCAAGGCCGAGGCCGCGCGC
CGCCGCGACGCGCTCGAGGCGTCCCACCGCGAGCGCCGCCTCGACGCCGCCCGCGCGCAG
GAAGAGGCTCAGCAGAAGATGGAAGAGGTGATGCAACTTGGAAAGGGGATTTCTTTCTTG
CACATGTTTGAAGCTCTTCGATATGATGGTCCTGGGGATAAGATCAAGTTGCCACCATCG
TCTTTTAAGGAATTGTCTGATGAAGGAGCACTGGACAAAGGTCCCATGTACTTCAGGTTG
TCAAAGGTTAGAGACAGTGTTCCGGGTGCCCCTCAGGATAATGATGCCGATGAGGCAACA
TGTTGTGGTGTTCTTGAGTTCACTGCAAGGGAAGGCTCCGCAGAACTCACTCCACATGTG
TGGAACAATCTGTTCCGGGGTGATAGCCCAGATGTTCCTCTGATTGAGGTTAGGTATGTC
AGTTTACCCAAAGGGACATATGCGAAGCTGAAGCCAGAAGGAGTGGGGTTCTCAGACCTT
CCTAACCATAGGGCTGTCCTTGAAACGGCACTCCGCAATCATGCAACACTATCTGAAAAT
GATTTTGTTGTGGTGAATTATGGGCAGCTGCAATACAAGTTGAAGGTTCTTGAATTAAAA
CCTGCATCAAGTGTTTCTGTCCTGGAGACAGATGTGGAAGTTGACATTGAAGGACCAGAT
TCAGTTTTGGACAACGTAGAGAATCAACATGTGCTTGTGCCACTTGAGACTGGAAAGGTT
GAATCTGGAGTTGTGGAAGAAGGAAAGTTTAGGTACTACAAATTTCTTGTTGATGAAGGT
ATGGGTGAGAAAGTAGCTTCTAGGCATGCAAATATTGAGGTTAAGATAGAGACATATACA
AGTGGTGGTGACACTGATATTTATGTATCAAGGCATCCTTTAGTTTTCCCAACTCAGCAC
CGTCACGAATGGTCTTCTCATGAAATGGGATCTAAGGTCCTCATACTGAAACCAAGGGAT
GCCAGTCTCTCCAGTGGTACCTACAGTATTGGAGTTTATGGTTTCAAGGGAACCACTAAA
TACCAACTTTCTGTAGCTATTAAAGATGTTCTTAATGGCCAAAGGATTGGTGAGCAGGCT
AGTGCCTCATCTAGTGTTGATGTTGATTCAGTGGTGTGCAAGAACTGCAAACGCTATATA
TCCAACCGAACTTCACTACTTCATGAAGCATACTGTGTGAGACACAATGTTGTTTGCATG
CATGATGGGTGTGGTGTTGTTCTTCGAAAGGAGGAAGCAACAGATCACGTGCATTGCAAC
AAGTGTGGGCAAGCTTTCCAGCAGAGAGAAATGGAGAAGCACATGAAAGTTTTCCATGAG
CCACTACAATGCCCTTGTGGGGTGGTCCTTGAAAAGGAAGATATGGTTCAACACCAATCC
TCAACCTGCCCTTTGCGCTTGATTGTGTGCCGATTTTGTGGTGACACTGTTCAAGCTGGT
GGAGAACCACTTGATGCTCGGGATCGGCTTCGCAACATGTGTGAGCACGAGAGTATCTGT
GGATCCAGGACTGCACCATGTGATTCTTGTGGACGGTCAGTCATGCTGAAGGACATGGAC
ATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAA
GATGGCCTGTCCTTTATCCTGCTGGGCTTTAACCACCAAGGCCATGAAGTTTCAGCACTG
CTGGACCAAATGTTATTTCCTTTTGTGTTACATATATCTTGTGTCATTGGTTAAATTGTA
ACACTGCGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAACACAGTGGC
GGTGTCTCCTTATGTATACACAAACCATCTATAATATTTGATTTGAGCTTTCTCATATTC
AGGAGCTTTATTAGAAACTTTCATTAA

consensusID : consensus_12942#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 346
fasta sequence 
                              [TCTTGTGGACGGTCAGTCATGNTGAAGGACATGGACATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAAGATGGCCTGNCCTTTATCCTGCTGGGCTTTAACCACCAAGGCCATGAAGTTTCAGCACTGCTGGACCAAATGTTATTNCCTTTTGTGTTANATATATCTTGTGTCATTGGTTAAATTGTAACACTGCGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAACNCAGTGGCGGTGTCTCCTTATGTATACACAAACCATCTATAATATTTGATTTGNGCTTTCTCAAAAAAAAAAAAAAAA]

[+] EMBL AU102167             [TCTTGTGGACGGTCAGTCATGNTGAAGGACATGGACATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAAGATGGCCTGNCCTTTATCCTGCTGGGCTTTAACCACCAAGGCCATGAAGTTTCAGCACTGCTGGACCAAATGTTATTNCCTTTTGTGTTANATATATCTTGTGTCATTGGTTAAATTGTAACACTGCGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAACNCAGTGGCGGTGTCTCCTTATGTATACACAAACCATCTATAATATTTGATTTGNGCTTTCTCAAAAAAAAAAAAAAAA]




>consensus_12942#1
TCTTGTGGACGGTCAGTCATGNTGAAGGACATGGACATTCATGTGATTGCTGTGCATCAG
AAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAAGATGGCCTGNCCTTTATCCTGCTG
GGCTTTAACCACCAAGGCCATGAAGTTTCAGCACTGCTGGACCAAATGTTATTNCCTTTT
GTGTTANATATATCTTGTGTCATTGGTTAAATTGTAACACTGCGTATGGGAGCATGGAAC
ACTGGGGCGGTGTATGGGAGTATGGAACNCAGTGGCGGTGTCTCCTTATGTATACACAAA
CCATCTATAATATTTGATTTGNGCTTTCTCAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12942#0      CCTCCAACTCCGGCCGCCACCGACCCCCCTCGACACCCGACTCCCTCCATAAATTTCCCC 60
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      CCCTCCCGCGGCCGCCGGGAGATCATCGCCGACGACAACCAGAGCAGAGGAGAGGGGAGG 120
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      GGAACCCAAGCAAGCAATCAGCGTGGAATCGGATCGGGTACGAGGAGGAGGAGGAGGAGG 180
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      GGGATGGATTTCGAGCTGCGCAAGGCGCGGGAGAAGCTGGAGCGGGAGCAGCGGGAGCGC 240
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      GTGCAGCGCGCCAAGGACAAGGCCGACCGCGAGCGCCGCGCCAAGGCCGAGGCCGCGCGC 300
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      CGCCGCGACGCGCTCGAGGCGTCCCACCGCGAGCGCCGCCTCGACGCCGCCCGCGCGCAG 360
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      GAAGAGGCTCAGCAGAAGATGGAAGAGGTGATGCAACTTGGAAAGGGGATTTCTTTCTTG 420
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      CACATGTTTGAAGCTCTTCGATATGATGGTCCTGGGGATAAGATCAAGTTGCCACCATCG 480
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      TCTTTTAAGGAATTGTCTGATGAAGGAGCACTGGACAAAGGTCCCATGTACTTCAGGTTG 540
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      TCAAAGGTTAGAGACAGTGTTCCGGGTGCCCCTCAGGATAATGATGCCGATGAGGCAACA 600
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      TGTTGTGGTGTTCTTGAGTTCACTGCAAGGGAAGGCTCCGCAGAACTCACTCCACATGTG 660
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      TGGAACAATCTGTTCCGGGGTGATAGCCCAGATGTTCCTCTGATTGAGGTTAGGTATGTC 720
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      AGTTTACCCAAAGGGACATATGCGAAGCTGAAGCCAGAAGGAGTGGGGTTCTCAGACCTT 780
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      CCTAACCATAGGGCTGTCCTTGAAACGGCACTCCGCAATCATGCAACACTATCTGAAAAT 840
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      GATTTTGTTGTGGTGAATTATGGGCAGCTGCAATACAAGTTGAAGGTTCTTGAATTAAAA 900
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      CCTGCATCAAGTGTTTCTGTCCTGGAGACAGATGTGGAAGTTGACATTGAAGGACCAGAT 960
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      TCAGTTTTGGACAACGTAGAGAATCAACATGTGCTTGTGCCACTTGAGACTGGAAAGGTT 1020
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      GAATCTGGAGTTGTGGAAGAAGGAAAGTTTAGGTACTACAAATTTCTTGTTGATGAAGGT 1080
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      ATGGGTGAGAAAGTAGCTTCTAGGCATGCAAATATTGAGGTTAAGATAGAGACATATACA 1140
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      AGTGGTGGTGACACTGATATTTATGTATCAAGGCATCCTTTAGTTTTCCCAACTCAGCAC 1200
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      CGTCACGAATGGTCTTCTCATGAAATGGGATCTAAGGTCCTCATACTGAAACCAAGGGAT 1260
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      GCCAGTCTCTCCAGTGGTACCTACAGTATTGGAGTTTATGGTTTCAAGGGAACCACTAAA 1320
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      TACCAACTTTCTGTAGCTATTAAAGATGTTCTTAATGGCCAAAGGATTGGTGAGCAGGCT 1380
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      AGTGCCTCATCTAGTGTTGATGTTGATTCAGTGGTGTGCAAGAACTGCAAACGCTATATA 1440
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      TCCAACCGAACTTCACTACTTCATGAAGCATACTGTGTGAGACACAATGTTGTTTGCATG 1500
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      CATGATGGGTGTGGTGTTGTTCTTCGAAAGGAGGAAGCAACAGATCACGTGCATTGCAAC 1560
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      AAGTGTGGGCAAGCTTTCCAGCAGAGAGAAATGGAGAAGCACATGAAAGTTTTCCATGAG 1620
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      CCACTACAATGCCCTTGTGGGGTGGTCCTTGAAAAGGAAGATATGGTTCAACACCAATCC 1680
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      TCAACCTGCCCTTTGCGCTTGATTGTGTGCCGATTTTGTGGTGACACTGTTCAAGCTGGT 1740
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      GGAGAACCACTTGATGCTCGGGATCGGCTTCGCAACATGTGTGAGCACGAGAGTATCTGT 1800
consensus_12942#1      ------------------------------------------------------------
                                                                                   

consensus_12942#0      GGATCCAGGACTGCACCATGTGATTCTTGTGGACGGTCAGTCATGCTGAAGGACATGGAC 1860
consensus_12942#1      ------------------------TCTTGTGGACGGTCAGTCATGNTGAAGGACATGGAC 36
                                               ********************* **************

consensus_12942#0      ATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAA 1920
consensus_12942#1      ATTCATGTGATTGCTGTGCATCAGAAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAA 96
                       ************************************************************

consensus_12942#0      GATGGCCTGTCCTTTATCCTGCTGGGCTTTAACCACCAAGGCCATGAAGTTTCAGCACTG 1980
consensus_12942#1      GATGGCCTGNCCTTTATCCTGCTGGGCTTTAACCACCAAGGCCATGAAGTTTCAGCACTG 156
                       ********* **************************************************

consensus_12942#0      CTGGACCAAATGTTATTTCCTTTTGTGTTACATATATCTTGTGTCATTGGTTAAATTGTA 2040
consensus_12942#1      CTGGACCAAATGTTATTNCCTTTTGTGTTANATATATCTTGTGTCATTGGTTAAATTGTA 216
                       ***************** ************ *****************************

consensus_12942#0      ACACTGCGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAACACAGTGGC 2100
consensus_12942#1      ACACTGCGTATGGGAGCATGGAACACTGGGGCGGTGTATGGGAGTATGGAACNCAGTGGC 276
                       **************************************************** *******

consensus_12942#0      GGTGTCTCCTTATGTATACACAAACCATCTATAATATTTGATTTGAGCTTTCTCATATTC 2160
consensus_12942#1      GGTGTCTCCTTATGTATACACAAACCATCTATAATATTTGATTTGNGCTTTCTCAAAAAA 336
                       ********************************************* ********* *   

consensus_12942#0      AGGAGCTTTATTAGAAACTTTCATTAA 2187
consensus_12942#1      AAAAAAAAAA----------------- 346
                       *  *     *


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)