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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12959#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1476 fasta sequence
[TATCGAAAATTAGTTCAATCATACATGTATTTGCACAGATGTATCATGAGGTGCTCTTTACATGGAAGATGAAACATACATAAATGCAACTCTTGTCAAACTTGTATTCTAGGTATGGTTGGAAATTTTGTAGAACAGTAGAGATCACAAGGATGATAAGAAGTGCATCACATGAGCAGCAACTGAATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACATCACCTTCTTGAAATGCCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTTGTAAGATGGCAGCAAAACGGACACTAATCCTCAGCAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGCTTTCAAGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGGACTGGTTAGTAGGTATTGCTCTGATGTTTGGAACGAGATAATCCGCAACCACATTAGCAGGTTCAGCTAATATATTGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATAAGAAGATCTGTTGTAACCATGCCAGGCGACAAATTGTGCACCATAACATTGTTCACTTCATTCATCTGCAACTCGGCCTGCAGAGATTTTGTAAGGTGCACCACACTTCTCTTCGTTGCACCATATGCAGCAAACCTTGGGGTTGGCCTTCCATCAGAACCAGCACCATCGATGTTAAATATGTGGCCACCTCGAGGTTGGTTTCTCATCATATTTATTGCCTCACGACAACATATCATTAATCCAAGAGTGTTAGTTGTGATCACTTCCATGAGAGCCTCGTCGGAGGTCTCGACCAACGGTTTGTAACTATATGCATTTGATCCAGCATTGTTGATCCAAATATCAATATACTTCATCTTGTCACGTGCAAAATCAACTAGTGCCTTTACATCCTTTCCTTCCCTAACATCACAGACAATTCCCCACACATGTTGCTCTCCAAATTCCTTTTTCAAGTCAGTCACCGCAGATTCTACCCTTTCAGCTGATCTTGAGCAGATTACAACATTATCGCCAGCCTTCAAAAATTCCTTTGCCAGAGCATATCCTATACCTTTCGTGGAACCGGTGATTAGAACATTATACGGGGGCACCATGGCCGCCCTCCGCGCGACCCCTCCACCACCAGGGACAGCCTCCGCGCGGATACCGGCAGCCTCCGGCCCGCCTCTCGCCGCAAGCCGGCGCCGCGCCGTCCGGCCGGGCAACCGCGCCCCAGCAGCGGCCGAGCCCGACGGCCGGAGCGGAGCCAGGCCCACCTGCGCCTGGGCACGGAGCGGGAGGTAGGCGGCGGTGGCCGCCATTGCGGCGGTAGCGAGACGAGGGGAGGGGAGGGGAGGGGAGCGGAGTGGAGAGGCGTCGTCAACTGCGGTGCTCGCCTTGCCGGCTAACGGTCGCGG]
[+] EMBL CB669633 [TATCGAAAATTAGTTCAATCATACATGTATTTGCACAGATGTATCATGAGGTGCTCTTTACATGGAAGATGAAACATACATAAATGCAACTCTTGTCAAACTTGTATTCTAGGTATGGTTGGAAATTTTGTAGAACAGTAGAGATCACAAGGATGATAAGAAGTGCATCACATGAGCAGCAACTGAATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACATCACCTTCTTGAAATGCCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTTGTAAGATGGCAGCAAAACGGACACTAATCCTCAGCAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGCTTTCAAGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGGACTGGTTAGTAGGTATTGCTCTGATGTTTGGAACGAGATAATCCGCAACCACATTAGCAGGTTCAACTAATATATTGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATAAGAAGATCTGTTGTAACCATGCCAGGCGACAAATTGTGCACCATAACATTGTTCACTTCATTCATCTGCAACTCGGCCTGCAGAGATTTTGTAAGGTGCACCACACTTCTCTTCGTTGCACCATATGCAGCAAACCTTGGGGTTGGCCTTCCATCAGAACCAGCACCATCGATGTTAAATATGTGGCCACCTCGAGGTTGGTTTCTCATCATATTTATTGCCTCACGA ]
[-] EMBL BI812939 [ ttttTTAGTTCAATCATACATGTA TTGCACAGATGTATCATGAGGGGCTCTTTACATGGAAGATGAAACATACATAAATGCAACTCTGGTCAAAC TGTATTCTAGGTATGGTTGGAAATTTTGTAGAACAGTAGAGATCACAAGGATGATAAGAAGTGCATCACATGAGCAGCAACTGAATTAGTGTATAATCAAA TGGTGATATTATACATAGGAGTACATCACCTTCTTGAAATGGCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTTGTAAGATGGCAGCAAAACGGACACTAATCCTCAGCAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGCTTTCAAGCCTGTGAGAAAACGGATGTAGG TGGTTTCATGGACTGGTTAGTAGGTATTG TCTGATG TTGGAACGAGATAATCCG AA CACATTAGCAGGTTCAGCTAATATA TGATGAAAAATTTGGCt ]
[+] EMBL CB653390 [ CATGAGGTGCTCTTTACATGGAAGATGAAACCTACATAAATGCAACTCTTGTCAAACTTGTATTCTAGGTATGGTTGGAAATTTTGTAGAACAGTAGAGATCACAAGGATGATAAGAAGTGCATCACATGAGCAGCAACTGAATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACATCACCTTCTTGAAATGCCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTTGTAAGATGGCAGCAAAACGGACACTAATCCTCAGCAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGCTTTCAAGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGGACTGGTTAGTAGGTATTGCTCTGATGTTTGGAACGAGATAATCCGCAACCACATTAGCAGGTTCAGCTAATATATTGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATAAGAAGATCTGTTGTAACCATGCCAGGCGACAAATTGTGCACCATAACATTGTTCACTTCATTCATCTGCAACTCGGCCTGCAGAGATTTTGTAAGGTGCACCACACTTCTCTTCGTTGCACCATATGCAGCAAACCTTGGGGTTGGCCTTCCATCAGAACCAGCACCATCGATGTTAAATATGTGGCCACCTCGAGGTTGGTTTCTCATCATATTTATTGCCTCACGACAACATATCATTAATCCAAGAGTGTTAG ]
[+] EMBL CB670780 [ GTTGGAAATTTTGTAGAACAGTAGAGATCACAAGGATGATAAGAAGTGCATCACATGAGCAGCAACTGAATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACATCACCTTCTTGAAATGCCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTTGTAAGATGGCAGCAAAACGGACACTAATCCTCAGCAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGCTTTCAAGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGGACTGGTTAGTAGGTATTGCTCTGATGTTTGGAACGAGATAATCCGCAACCACATTAGCAGGTTCAGCTAATATATTGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATAAGAAGATCTGTTGTAACCATGCCAGGCGACAAATTGTGCACCATAACATTGTTCACTTCATTCATCTGCAACTCGGCCTGCAGAGATTTTGTAAGGTGCACCACACTTCTCTTCGTTGCACCATATGCAGCAAACCTTGGGGTTGGCCTTCCATCAGAACCAGCACCATCGATGTTAAATATGTGGCCACCTCGAGGTTGGTTTCTCATCATATTTATTGCCTCACGACAACATATCATTAATCCAAGAGTGTTAGTTGTGATCACTTCCATGAGAGCCTCGTCGGAGGTCTCGACCAACGGTTTGTAACTATATGCATTTGATCCAGCATT ]
[-] EMBL CB653389 [ ATGCAGCAAACCTTGGGGTTGGCCTTCCATCAGAACCAGCACCATCGATGTTAAATATGTGGCCACCTCGAGGTTGGTTTCTCATCATATTTATTGCCTCACGACAACATATCATTAATCCAAGAGTGTTAGTTGTGATCACTTCCATGAGAGCCTCGTCGGAGGTCTCGACCAACGGTTTGTAACTATATGCATTTGATCCAGCATTGTTGATCCAAATATCAATATACTTCATCTTGTCACGTGCAAAATCAACTAGTGCCTTTACATCCTTTCCTTCCCTAACATCACAGACAATTCCCCACACATGTTGCTCTCCAAATTCCTTTTTCAAGTCAGTCACCGCAGATTCTACCCTTTCAGCTGATCTTGAGCAGATTACAACATTATCGCCAGCCTTCAAAAATTCCTTTGCCAGAGCATATCCTATACCTTTCGTGGAACCGGTGATTAGAACATTATACGGGGGCACCATGGCCGCCCTCCGCGCGACCCCTCCACCACCAGGGACAGCCTCCGCGCGGATACCGGCAGCCTCCGGCCCGCCTCTCGCCGCAAGCCGGCGCCGCGCCGTCCGGCCGGGCAACCGCGCCCCAGCAGCGGCCGAGCCCGACGGCCGGAGCGGAGCCAGGCCCACCTGCGCCTGGGCACGGAGCGGGAGGTAGGCGGCGGTGGCCGCCATTGCGGCGGTAGCGAGACGAGGGGAGGGGAGGGGAGGGGAGCGGAGTGGAGAGGCGTCGTCAACTGCGGTGCTCGCCTTGCCGGCT ]
[-] EMBL CB670779 [ tCGGGGGCACCATGGCCGCCCTCCGCGCGACCCCTCCACCACCCGGGACAGCCTCCGCGCGGATGCCGGCAGCCTCCGGCCCGCCTCTCGCCGCAAGCCGGCGCCGCGCCGTCCGGCCGGGCATCCGCGCCCCAGCACCGGCCGAGCCCGACGGCCGGAGCGGAGCCAGGCCCACCTGCGCCTGGGCACGGAGCGGGAGGTAGGCGGCGGTGGCCGCCATTGCGGCGGTAGCGAGCCGAGGGGAGGGGAGGGGAGGGGAGCGGAGTGGAGAGGCGTCGTCATCTGCGGTGCTCGCCTTGCCGGCTAACGGTCGCGG]
consensusID : consensus_12959#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1318 fasta sequence
[TCTTTTTTTTTGATAAGAAGTGCATCACATGAGCAGCAACTGCATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACATCACCTTCTTGAAATGCCATCGGTAATACCTGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTTGTAAGATGGCAGCAAAACGGACACTAATCCTCAGCAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGCTTTCAAGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGGACTGGTTAGTAGGTATTGCTCTGATGTTTGGAACGAGATAATCCGCAACCACATTAGCAGGTTCAGCTAATATATTGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATAAGAAGATCTGTTGTAACCATGCCAGGCGACAAATTGTGCACCATAACATTGTTCACTTCATTCATCTGCAACTCGGCCTGCAGAGATTTTGTAAGGTGCACCACACTTCTCTTCGTTGCACCATATGCAGCAAACCTTGGGGTTGGCCTTCCATCAGAACCAGCACCATCGATGTTAAATATGTGGCCACCTCGAGGTTGGTTTCTCATCATATTTATTGCCTCACGACAACATATCATTAATCCAAGAGTGTTAGTTGTGATCACTTCCATGAGAGCCTCGTCGGAGGTCTCGACCAACGGTTTGTAACTATATGCATTTGATCCAGCATTGTTGATCCAAATATCAATATACTTCATCTTGTCACGTGCAAAATCAACTAGTGCCTTTACATCCTTTCCTTCCCTAACATCACAGACAATTCCACATGTTGCTCTCCAAATTCCTTTTTCAAGTCAGTCACCGCAGATTCTACCCTTTCAGCTGTAGAGGATAGACTGATCTTGAGCAGATTACAACATTATCGCCAGCCTTCAAAAATTCCTTTGCCAGAGCATATCCTATACCTTTCGTGGAACCGGTGATTAGAACATTATACGGGGGCACCATGGCCGCCCTCCGCGCGACCCCTCCACCACCAGGGACAGCCTCCGCGCGGATACCGGCAGCCTCCGGCCCGCCTCTCGCCGCAAGCCGGCGCCGCGCCGTCCGGCCGGGCAACCGCGCCCCAGCAGCGGCCGAGCCCGACGGCCGGAGCGGAGCCAGGCCCACCTGCGCCTGGGCACGGAGCGGGAGGTAGGCGGCGGTGGCCGCCATTGCGGCGGTAGCGAGACGAGGGGAGGGGAGGGGAGGGGAGCGGAGTGGAGAGGCGTCGTCAACGGCGGTGC]
[+] EMBL CB668324 [TCTTTTTTTTTGATAAGAAGTGCATCACATGAGCAGCAACTGCATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACATCACCTTCTTGAAATGCCATCGGTAATACCTGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTTGTAAGATGGCAGCAAAACGGACACTAATCCTCAGCAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGCTTTCAAGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGGACTGGTTAGTAGGTATTGCTCTGATGTTTGGAACGAGATAATCCGCAACCACATTAGCAGGTTCAGCTAATATATTGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATAAGAAGATCTGTTGTAACCATGCCAGGCGACAAATTGTGCACCATAACATTGTTCACTTCATTCATCTGCAACTCGGCCTGCAGAGATTTTGTAAGGTGCACCACACTTCTCTTCGTTGCACCATATGCAGCAAACCTTGGGGTTGGCCTTCCATCAGAACCAGCACCATCGATGTTAAATATGTGGCCACCTCGAGGTTGGTTTCTCATCATATTTATTGCCTCACGACAACATATCATTAATCCAAGAGTGTTAGTTGTGATCACTTCCATGAGAGCCTCGTCGGAGGTCTCGACCAACGGTTTGTAACTATATGCATTTGATCCAGCATTGTTGATCCAAATATCAAT ]
[-] EMBL CB678505 [ ACCAGCACCATCGATGTTAAATATGTGGCCACCTCGAGGTTGGTTTCTCATCATATTTATTGCCTCACGACAACATATCATTAATCCAAGAGTGTTAGTTGTGATCACTTCCATGAGAGCCTCGTCGGAGGTCTCGACCAACGGTTTGTAACTATATGCATTTGATCCAGCATTGTTGATCCAAATATCAATATACTTCATCTTGTCACGTGCAAAATCAACTAGTGCCTTTACATCCTTTCCTTCCCTAACATCACAGACAATTCCACATGTTGCTCTCCAAATTCCTTTTTCAAGTCAGTCACCGCAGATTCTACCCTTTCAGCTGTAGAGGATAGACTGATCTTGAGCAGATTACAACATTATCGCCAGCCTTCAAAAATTCCTTTGCCAGAGCATATCCTATACCTTTCGTGGAACCGGTGATTAGAACATTATACGGGGGCACCATGGCCGCCCTCCGCGCGACCCCTCCACCACCAGGGACAGCCTCCGCGCGGATACCGGCAGCCTCCGGCCCGCCTCTCGCCGCAAGCCGGCGCCGCGCCGTCCGGCCGGGCAACCGCGCCCCAGCAGCGGCCGAGCCCGACGGCCGGAGCGGAGCCAGGCCCACCTGCGCCTGGGCACGGAGCGGGAGGTAGGCGGCGGTGGCCGCCATTGCGGCGGTAGCGAGACGAGGGGAGGGGAGGGGAGGGGAGCGGAGTGGAGAGGCGTCGTCAACGGCGGTGC]
consensusID : consensus_12959#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence
[TTTTTTTTTTTTTTTTTTACATGGAAGATGAAACATACATAAATGCAACTCTTGTCAAACTTGTATTCTAGGTATGGTTGGAAATTTTGTAGAACAGTAGAGATCACAAGGATGATAAGAAGTGCATCACATGAGCAGCAACTGAATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACATCACCTTCTTGAAATGCCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTTGTAAGATGGCAGCAAAACGGACACTAATCCTCAGCAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGCTTTCAAGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGGACTGGTTAGTAGGTATTGCTCTGATGTTTGGAACGAGATAATCCGCAACCACATTAGCAGGTTCAGCTAATATATTGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATAAGAAGATCTGTTGTAACCATGCCAGGCGACAAATTGTGCACCATAACATTGTTCACTTCATACATCTGCAACTCGGCCTGCAAAGATTTTGTAAGGTGCACCACACTTCTCTTCGTCGCACCATATGCAGCAAACCTTGGGGTTGGCCTTTCATCAAAACCA]
[+] EMBL CA762658 [TTTTTTTTTTTTTTTTTTACATGGAAGATGAAACATACATAAATGCAACTCTTGTCAAACTTGTATTCTAGGTATGGTTGGAAATTTTGTAGAACAGTAGAGATCACAAGGATGATAAGAAGTGCATCACATGAGCAGCAACTGAATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACATCACCTTCTTGAAATGCCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTTGTAAGATGGCAGCAAAACGGACACTAATCCTCAGCAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGCTTTCAAGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGGACTGGTTAGTAGGTATTGCTCTGATGTTTGGAACGAGATAATCCGCAACCACATTAGCAGGTTCAGCTAATATATTGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATAAGAAGATCTGTTGTAACCATGCCAGGCGACAAATTGTGCACCATAACATTGTTCACTTCATACATCTGCAACTCGGCCTGCAAAGATTTTGTAAGGTGCACCACACTTCTCTTCGTCGCACCATATGCAGCAAACCTTGGGGTTGGCCTTTCATCAAAACCA]
consensusID : consensus_12959#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence
[ATTCAAAAAGGGTAGCTGAGAAATTTCGAACACTCATGAGTATGTAGTGAGAATCAGCATAACTTTATAGCCAGTGATTTTCATATTTGTACATATGAAAAGAATATAAACATGAGTAAGTTCATGTGCAGATATTTGATGATGATGGGGTGATTATGTACCCAAATATCAATATACTTCATCTTGTCACGTGCAAAATCAACTAGTGCCTTTACATCCTTTCCTTCCCTAACATCACAGACAATTCCACATGTTGCTCTCCAAATTCCTTTTTCAAGTCAGTCACCGCAGATTCTACCCTTTCAGCTGTAGAGGATAGACTGATCTTGAGCAGATTACAACATTATCGCCAGCCTTCAAAAATTCCTTTGCCAGAGCATATCCTATACCTTTCGTGGAACCGGTGATTAGAACATTATTCGGGGGCACCATGGCCGCCCTCCGCGCGACCCCTCCACCACCAGGGACAGCCTCCGCGCGGATACCGGCAGCCTCCGGCCCGCCTCTCGCCGCAAGCCGGCGCCGCGCCGTCCGGCCGGGCAACCGCGCCCCAGCAGCGGCCGAGCCCGACGGCCGGAGCGGAGCCAGGCCCACCTGCGCCTGGGCACGGAGCGGGAGGTAGGCGGCGGTGGCCGCCATTGCGGCGGTAGCGAGACGAGGGGAGGGGAGGGGAGGGGAGGGGAGT]
[-] EMBL CB669634 [ATTCAAAAAGGGTAGCTGAGAAATTTCGAACACTCATGAGTATGTAGTGAGAATCAGCATAACTTTATAGCCAGTGATTTTCATATTTGTACATATGAAAAGAATATAAACATGAGTAAGTTCATGTGCAGATATTTGATGATGATGGGGTGATTATGTACCCAAATATCAATATACTTCATCTTGTCACGTGCAAAATCAACTAGTGCCTTTACATCCTTTCCTTCCCTAACATCACAGACAATTCCACATGTTGCTCTCCAAATTCCTTTTTCAAGTCAGTCACCGCAGATTCTACCCTTTCAGCTGTAGAGGATAGACTGATCTTGAGCAGATTACAACATTATCGCCAGCCTTCAAAAATTCCTTTGCCAGAGCATATCCTATACCTTTCGTGGAACCGGTGATTAGAACATTATTCGGGGGCACCATGGCCGCCCTCCGCGCGACCCCTCCACCACCAGGGACAGCCTCCGCGCGGATACCGGCAGCCTCCGGCCCGCCTCTCGCCGCAAGCCGGCGCCGCGCCGTCCGGCCGGGCAACCGCGCCCCAGCAGCGGCCGAGCCCGACGGCCGGAGCGGAGCCAGGCCCACCTGCGCCTGGGCACGGAGCGGGAGGTAGGCGGCGGTGGCCGCCATTGCGGCGGTAGCGAGACGAGGGGAGGGGAGGGGAGGGGAGGGGAGT]
consensusID : consensus_12959#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence
[TTTTTTTTTTAGCAGCAACGGAATTAGTGTATAATCAAATGGTGATATTATACATAGGAGTACATCACCTTCTTGAAATGGCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTGTGTAAGATGGAGAAAAGGACACTAATCCTCAGAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGGTTTTCAAGCCTGTGAGAAAACGGATGTAGGTGGGTTTCATGGACGTGGTTAGTAGGTATGTCTGATGTTGGGGAACGAGATTAATCCGAACCACATTAGCAGGGTTCAGCTAATATATGTGATGAACAAATTTGGCTGCTTTGTTGTGGCACCAGACATAAGAAGATCTGTTGTAACCATGCCAGGGCGACAAATGTGTGCCACCATAACATTGTTCACTTTC]
[-] EMBL BI812410 [TTTTTTTTTTAGCAGCAACGGAATTAGTGTATAATCAAATGGTGATATTATACATAGGAGTACATCACCTTCTTGAAATGGCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAGAACAAGAAAATGTCCCTAGTTCTCTTCAGGGTGTGTAAGATGGAGAAAAGGACACTAATCCTCAGAACATACTTGTTCCTACGAGCACCAAAAGCAATCCTTGAAAATATTCTGGAGTAGGGTTTTCAAGCCTGTGAGAAAACGGATGTAGGTGGGTTTCATGGACGTGGTTAGTAGGTATGTCTGATGTTGGGGAACGAGATTAATCCGAACCACATTAGCAGGGTTCAGCTAATATATGTGATGAACAAATTTGGCTGCTTTGTTGTGGCACCAGACATAAGAAGATCTGTTGTAACCATGCCAGGGCGACAAATGTGTGCCACCATAACATTGTTCACTTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12959#2 -----------------------------------------TTTTTTTTTTTTTTTTTTA 19
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 TATCGAAAATTAGTTCAATCATACATGTATTTGCACAGATGTATCATGAGGTGCTCTTTA 60
consensus_12959#1 ------------------------------------------------------------
consensus_12959#3 --------------------------------------------ATTCAAAAAGGGTAGC 16
consensus_12959#2 CATGGAAGATGAAACATACATAA--ATGCAACTCTTGTCAAACTTGTATTCTAGGTA-TG 76
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 CATGGAAGATGAAACATACATAA--ATGCAACTCTTGTCAAACTTGTATTCTAGGTA-TG 117
consensus_12959#1 ------------------------------------------------------------
consensus_12959#3 TGAGAAATTTCGAACACTCATGAGTATGTAGTGAGAATCAGCATAACTTTATAGCCAGTG 76
consensus_12959#2 GTTGGAAATTTTGTAGAACAGTAGAGATCACAAGGATGATAAG----AAGTGCATCACAT 132
consensus_12959#4 ---------------------------------------------------TTTTTTTTT 9
consensus_12959#0 GTTGGAAATTTTGTAGAACAGTAGAGATCACAAGGATGATAAG----AAGTGCATCACAT 173
consensus_12959#1 --------------------------TCTTTTTTTTTGATAAG----AAGTGCATCACAT 30
consensus_12959#3 ATTTTCATATTTGTACATATGAAAAGAATATAAACATGAGTAAGTTCATGTGCAGATATT 136
*
consensus_12959#2 GAGCAGCAACTGAATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACAT-CA 191
consensus_12959#4 TAGCAGCAACGGAATTAGTGTATAATCAAATGG-TGATATTATACATAGGAGTACAT-CA 67
consensus_12959#0 GAGCAGCAACTGAATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACAT-CA 232
consensus_12959#1 GAGCAGCAACTGCATTAGTGTATAATCAAATTGCTGATATTATACATAGGAGTACAT-CA 89
consensus_12959#3 TGATGATGATGGGGTGATTATGTACCCAAAT-ATCAATATACTTCATCTTGTCACGTGCA 195
* * * * * * ** ***** **** * *** ** * **
consensus_12959#2 CCTTCTTGAAATGCCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAG 251
consensus_12959#4 CCTTCTTGAAATGGCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAG 127
consensus_12959#0 CCTTCTTGAAATGCCATCGGTAATACATGCTATTTTACAAAGAATGTAATTACAAGAGAG 292
consensus_12959#1 CCTTCTTGAAATGCCATCGGTAATACCTGCTATTTTACAAAGAATGTAATTACAAGAGAG 149
consensus_12959#3 AAATCAACTAGTGCCTTTACATCCTTTCCTTCCCTAACATCACAGACAATTCCACATGTT 255
** * ** * * * * *** * **** ** *
consensus_12959#2 AACAAGAAAATGTCCCT----AGT---TCTCTTCAGGGT-TGTAAGAT-GGCAGCAAAAC 302
consensus_12959#4 AACAAGAAAATGTCCCT----AGT---TCTCTTCAGGGTGTGTAAGAT-GGAG---AAAA 176
consensus_12959#0 AACAAGAAAATGTCCCT----AGT---TCTCTTCAGGGT-TGTAAGAT-GGCAGCAAAAC 343
consensus_12959#1 AACAAGAAAATGTCCCT----AGT---TCTCTTCAGGGT-TGTAAGAT-GGCAGCAAAAC 200
consensus_12959#3 GCTCTCCAAATTCCTTTTTCAAGTCAGTCACCGCAGATTCTACCCTTTCAGCTGTAGAGG 315
**** * * *** ** * *** * * * * *
consensus_12959#2 GGACACTAATCCTCAGCAACATACT-TGTTCCTACGAGCACCAAAAGCAATCCTTGAAAA 361
consensus_12959#4 GGACACTAATCCTCAG-AACATACT-TGTTCCTACGAGCACCAAAAGCAATCCTTGAAAA 234
consensus_12959#0 GGACACTAATCCTCAGCAACATACT-TGTTCCTACGAGCACCAAAAGCAATCCTTGAAAA 402
consensus_12959#1 GGACACTAATCCTCAGCAACATACT-TGTTCCTACGAGCACCAAAAGCAATCCTTGAAAA 259
consensus_12959#3 ATAGACTGATCTTGAGCAGATTACAACATTATCGCCAGCCTTCAAAA-ATTCCTTTGCCA 374
* *** *** * ** * *** ** * *** *** * ***** *
consensus_12959#2 TATTCTGGAGTAGG-CTTTCA---AGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGG 417
consensus_12959#4 TATTCTGGAGTAGGGTTTTCA---AGCCTGTGAGAAAACGGATGTAGGTGGGTTTCATGG 291
consensus_12959#0 TATTCTGGAGTAGG-CTTTCA---AGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGG 458
consensus_12959#1 TATTCTGGAGTAGG-CTTTCA---AGCCTGTGAGAAAACGGATGTAGGTTGGTTTCATGG 315
consensus_12959#3 GAGCATATCCTATACCTTTCGTGGAACCGGTGATTAGAACATTATTCGGGGGCACCATGG 434
* * ** **** * ** **** * * * * * ** *****
consensus_12959#2 AC-TGGTTAGTAGGTATTGCTCTGATGTTTGG-AACGAGATAATCCGCAACCACATTAGC 475
consensus_12959#4 ACGTGGTTAGTAGGTATG--TCTGATGTTGGGGAACGAGATTAATCCGAACCACATTAGC 349
consensus_12959#0 AC-TGGTTAGTAGGTATTGCTCTGATGTTTGG-AACGAGATAATCCGCAACCACATTAGC 516
consensus_12959#1 AC-TGGTTAGTAGGTATTGCTCTGATGTTTGG-AACGAGATAATCCGCAACCACATTAGC 373
consensus_12959#3 CCGCCCTCCGCGCG-ACCCCTCCACCACCAGG----GACAGCCTCCGCGCGGATACCGGC 489
* * * * * ** ** ** * * * * **
consensus_12959#2 AGG-TTCAGCTAATATAT-TGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATA 533
consensus_12959#4 AGGGTTCAGCTAATATATGTGATGAACAAATTTGGCTGCTTTGTTGTGGCACCAGACATA 409
consensus_12959#0 AGG-TTCAGCTAATATAT-TGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATA 574
consensus_12959#1 AGG-TTCAGCTAATATAT-TGATGAAAAATTTGGCCTGCTTTGTTGTGGCACCAGACATA 431
consensus_12959#3 AGCCTCCGGCCCGCCTCT-CGCCG--CAAGCCGGC--GCCGCGCCGTCCGGCCGGGCAAC 544
** * * ** * * * * ** * ** * ** ** * **
consensus_12959#2 AGAAGATCTGTTGTAACCATGCCAGG-CGACAAAT-TGTGC-ACCATAACATTGTTCACT 590
consensus_12959#4 AGAAGATCTGTTGTAACCATGCCAGGGCGACAAATGTGTGCCACCATAACATTGTTCACT 469
consensus_12959#0 AGAAGATCTGTTGTAACCATGCCAGG-CGACAAAT-TGTGC-ACCATAACATTGTTCACT 631
consensus_12959#1 AGAAGATCTGTTGTAACCATGCCAGG-CGACAAAT-TGTGC-ACCATAACATTGTTCACT 488
consensus_12959#3 CGCGCCCCAGCAGCGGCCGAGCCCGA-CGGCCGG--------AGCGGAGCCAGGCCCACC 595
* * * * ** *** * ** * * * * * * ***
consensus_12959#2 TCATACATCTGCAACTCGGCCTGCAAAGATTTTGTAAGGTGCACCACACTTCTCTTCGTC 650
consensus_12959#4 TTC--------------------------------------------------------- 472
consensus_12959#0 TCATTCATCTGCAACTCGGCCTGCAGAGATTTTGTAAGGTGCACCACACTTCTCTTCGTT 691
consensus_12959#1 TCATTCATCTGCAACTCGGCCTGCAGAGATTTTGTAAGGTGCACCACACTTCTCTTCGTT 548
consensus_12959#3 T---GCGCCTGGGCACGGAGCGGGAGGTAGGCGGCGGTGGCCGCCATTGCGGCGGTAGCG 652
*
consensus_12959#2 GCACCATATGCAGCAAACCTTGGGGTTGGCCTTTCATCAAAACCA--------------- 695
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 GCACCATATGCAGCAAACCTTGGGGTTGGCCTTCCATCAGAACCAGCACCATCGATGTTA 751
consensus_12959#1 GCACCATATGCAGCAAACCTTGGGGTTGGCCTTCCATCAGAACCAGCACCATCGATGTTA 608
consensus_12959#3 AGACGAGGGGAGGGGAGGGGAGGGGAGGGGAGT--------------------------- 685
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 AATATGTGGCCACCTCGAGGTTGGTTTCTCATCATATTTATTGCCTCACGACAACATATC 811
consensus_12959#1 AATATGTGGCCACCTCGAGGTTGGTTTCTCATCATATTTATTGCCTCACGACAACATATC 668
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 ATTAATCCAAGAGTGTTAGTTGTGATCACTTCCATGAGAGCCTCGTCGGAGGTCTCGACC 871
consensus_12959#1 ATTAATCCAAGAGTGTTAGTTGTGATCACTTCCATGAGAGCCTCGTCGGAGGTCTCGACC 728
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 AACGGTTTGTAACTATATGCATTTGATCCAGCATTGTTGATCCAAATATCAATATACTTC 931
consensus_12959#1 AACGGTTTGTAACTATATGCATTTGATCCAGCATTGTTGATCCAAATATCAATATACTTC 788
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 ATCTTGTCACGTGCAAAATCAACTAGTGCCTTTACATCCTTTCCTTCCCTAACATCACAG 991
consensus_12959#1 ATCTTGTCACGTGCAAAATCAACTAGTGCCTTTACATCCTTTCCTTCCCTAACATCACAG 848
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 ACAATTCCCCACACATGTTGCTCTCCAAATTCCTTTTTCAAGTCAGTCACCGCAGATTCT 1051
consensus_12959#1 ACAATTCCACATGTTGCTCTCCAAATTCCTTTTTCAAGTCAGTCACCGCAGATTCTACCC 908
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 ACCCTTTCAGCTGATCTTGAGCAGATTACAACATTATCGCCAGCCTTCAAAAATTCCTTT 1111
consensus_12959#1 TTTCAGCTGTAGAGGATAGACTGATCTTGAGCAGATTACAACATTATCGCCAGCCTTCAA 968
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 GCCAGAGCATATCCTATACCTTTCGTGGAACCGGTGATTAGAACATTATACGGGGGCACC 1171
consensus_12959#1 AAATTCCTTTGCCAGAGCATATCCTATACCTTTCGTGGAACCGGTGATTAGAACATTATA 1028
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 ATGGCCGCCCTCCGCGCGACCCCTCCACCACCAGGGACAGCCTCCGCGCGGATACCGGCA 1231
consensus_12959#1 CGGGGGCACCATGGCCGCCCTCCGCGCGACCCCTCCACCACCAGGGACAGCCTCCGCGCG 1088
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 GCCTCCGGCCCGCCTCTCGCCGCAAGCCGGCGCCGCGCCGTCCGGCCGGGCAACCGCGCC 1291
consensus_12959#1 GATACCGGCAGCCTCCGGCCCGCCTCTCGCCGCAAGCCGGCGCCGCGCCGTCCGGCCGGG 1148
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 CCAGCAGCGGCCGAGCCCGACGGCCGGAGCGGAGCCAGGCCCACCTGCGCCTGGGCACGG 1351
consensus_12959#1 CAACCGCGCCCCAGCAGCGGCCGAGCCCGACGGCCGGAGCGGAGCCAGGCCCACCTGCGC 1208
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 AGCGGGAGGTAGGCGGCGGTGGCCGCCATTGCGGCGGTAGCGAGACGAGGGGAGGGGAGG 1411
consensus_12959#1 CTGGGCACGGAGCGGGAGGTAGGCGGCGGTGGCCGCCATTGCGGCGGTAGCGAGACGAGG 1268
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 ------------------------------------------------------------
consensus_12959#4 ------------------------------------------------------------
consensus_12959#0 GGAGGGGAGCGGAGTGGAGAGGCGTCGTCAACTGCGGTGCTCGCCTTGCCGGCTAACGGT 1471
consensus_12959#1 GGAGGGGAGGGGAGGGGAGCGGAGTGGAGAGGCGTCGTCAACGGCGGTGC---------- 1318
consensus_12959#3 ------------------------------------------------------------
consensus_12959#2 -----
consensus_12959#4 -----
consensus_12959#0 CGCGG 1476
consensus_12959#1 -----
consensus_12959#3 -----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||