cluster # 12976

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Oryza sativa
cluster # 12976 cluster # 12976 Sequences # 12 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12976#0 length = 1973 sequences # 11

consensus_12976#1 length = 564 sequences # 1

consensusID : consensus_12976#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1973
fasta sequence

                              [CGCCCGCGCCGACCATGGCGTCCCCCGCGCGCCCCGCCGCCGCCTCCGTCTCCGGCGCGTTCGGCCTCCCCGCCGACCCCACCGCCGCCCGCTGCTCCTTCGACCAGTCGCGCCGCCGCCCGGAGGATTTGCAGCAGGAGAAGAGGATGGTGAGGACGTTCGTGAACGTGTACGGTGGGCAGGAGAGCTACACCAAGGAGGCGGTCATGGCGGCCGTGGAGGAGTGCATGAAGAAGCAGGCCGAGGGCTTGCTGCATTCGCTCGAGGGAATCGGCGGCCGCCTGTCGCAGCTGGAGCTCTACTGCTACAAGCTCGAGAGGTCCATCGGGGAGCTGCGCAGCGACGTCATGGATTACCACAGCGAGGGGACGGTCAACTTCCGGTGCCTGGAGAAGAATCTGAGGCAGGTTCAAAAATCTGTGCAGATTCTGCAGGATAAGCATGAGATTTCAGAGACACCGAACGAGTTCTCCAAACTTCAAATAGCGCATGAGTTCCCTGCTAGAGCAAATGAAGCCTCTGCTTTCTCAACATTCGGAAGGGAAAATGATCACAGCACACAAGTTGCAAAACATGAGGTTGCTTTCATGCCACTTCAGCAAGTTAATGCAATGCAATCTCCTGCTGTGCCAGTCCAAAGCAGCAATGGTTATATTTTGCAGCAACTAGTGCCTGTCTCTTTGAGCACACAACCAGATCAGCAGCAGCCGAGTCAAGCTGCCGTGTATTATATGCAAAGCCAAAATCCTATTAAGTGCACAGAGAGTGAACCATCAGAATCCGCGGTACATGTTATTCAGTCACAAATCCAGAATCCTGAAGCCAGGGTTGCAGTTGACCTATCTCAGAAATCTAGCCAGGTGACAGAATTGTACCCTCAACCCCA-GGACCAAAGGCTACATCTGCCTGCTCAGCAGGTTGAGTCACAAGCATGGCGAACACAGCCCCTTGTGGTGCAACCGCAGCAATACAATATTCAGCAAGTTCCACCACAGCTAGTTCAACAGCAAACATCATCTCCTCAGGCTCAAAGTGCTCCTCAAGTCGCTGTCTTGTATCCTCCATACTCTTCTCAGAAGCCTGCCAGTGCTACAACGGAGCCACTTCTGAGAAACATGGTTGTGCACTCGCCATACTCTTCACCTCAGCAGAAGCATCATGAAGCCATGCCTTCTTTTTATGGCCAAGGCAATACAGTTTTGCTTCCATCGACAGACCTTAACATCCAGCATCAGCAGCCACAACCATTGCAGCAACACGGCCTGAGCTCATGCCCACCTCAACCAAGCAAGCCCAACCACTGTAGTGTGGCATCCTATGCCGTTCAAGGTAGTGGCCAATCCTACAGCGCCACATTCAAGAATCCTTCTAACTGTGCTGCTACTGTTGTTGCTGTTCTGCCTCAGCATCCAGCGAGTGGTCCGATGGCATTTCATCATTTGGGACCACAAGTCGTGCATAATCAGCCATTTGGAAATATGTTTGAAACAGCTAGTGTGGTAGGGTATCCACGGGATCGAGTTGAGAGCGTAGCTCTCCCAGTGGTAACTGCAGCCCAACCTGCAGACTCTGTTGCCATGGCTGATAAG-CTCAATGCAGGTAGCAATGTTACA-TCCCCACGAGAATGGTCAGGTTAGTGCAGAATGA-ACCAGTCATATTGAGATGTTTCACTGGTCTCACAAAGGATCT-CCACTTCTAATATGGACTGGAAGCTTATCAGCTCTCCATAAGGCCACTTCAATCTGGCTTCCTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTTCAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATATGTCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTATGAATATATTTGACGAGTTTACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB630113             [CGCCCGCGCCGACCATGGCGTCCCCCGCGCGCCCCGCCGCCGCCTCCGTCTCCGGCGCGTTCGGCCTCCCCGCCGACCCCACCGCCGCCCGCTGCTCCTTCGACCAGTCGCGCCGCCGCCCGGAGGATTTGCAGCAGGAGAAGAGGATGGTGAGGACGTTCGTGAACGTGTACGGTGGGCAGGAGAGCTACACCAAGGAGGCGGTCATGGCGGCCGTGGAGGAGTGCATGAAGAAGCAGGCCGAGGGCTTGCTGCATTCGCTCGAGGGAATCGGCGGCCGCCTGTCGCAGCTGGAGCTCTACTGCTACAAGCTCGAGAGGTCCATCGGGGAGCTGCGCAGCGACGTCATGGATTACCACAGCGAGGGGACGGTCAACTTCCGGTGCCTGGAGAAGAATCTGAGGCAGGTTCAAAAATCTGTGCAGATTCTGCAGGATAAGCATGAGATTTCAGAGACACCGAACGAGTTCTCCAAACTTCAAATAGCGCATGAGTTCCCTGCTAGAGCAAATGAAGCCTCTGCTTTCTCAACATTCGGAAGGGAAAATGATCACAGCACACAAGTTGCAAAACATGAGGTTGCTTTCATGCCACTTCAGCAAGTTAATGCAATGCAATCTCCTGCTGTGCCAGTCCAAAGCAGCAATGGTTATATTTTGCAGCAACTAGTGCCTGTCTCTTTGAGCACACAACCAGATCAGCAGCAGCCGAGTCAAGCTGCCGTGTATTATATGCAAAGCCAAAATCCTATTAAGTGCACAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK101605             [                                                                                                                                                                                                                                                                                      CGCCTGTCGCAGCTGGAGCTCTACTGCTACAAGCTCGAGAGGTCCATCGGGGAGCTGCGCAGCGACGTCATGGATTACCACAGCGAGGGGACGGTCAACTTCCGGTGCCTGGAGAAGAATCTGAGGCAGGTTCAAAAATCTGTGCAGATTCTGCAGGATAAGCATGAGATTTCAGAGACACCGAACGAGTTCTCCAAACTTCAAATAGCGCATGAGTTCCCTGCTAGAGCAAATGAAGCCTCTGCTTTCTCAACATTCGGAAGGGAAAATGATCACAGCACACAAGTTGCAAAACATGAGGTTGCTTTCATGCCACTTCAGCAAGTTAATGCAATGCAATCTCCTGCTGTGCCAGTCCAAAGCAGCAATGGTTATATTTTGCAGCAACTAGTGCCTGTCTCTTTGAGCACACAACCAGATCAGCAGCAGCCGAGTCAAGCTGCCGTGTATTATATGCAAAGCCAAAATCCTATTAAGTGCACAGAGAGTGAACCATCAGAATCCGCGGTACATGTTATTCAGTCACAAATCCAGAATCCTGAAGCCAGGGTTGCAGTTGACCTATCTCAGAAATCTAGCCAGGTGACAGAATTGTACCCTCAACCCCA GGACCAAAGGCTACATCTGCCTGCTCAGCAGGTTGAGTCACAAGCATGGCGAACACAGCCCCTTGTGGTGCAACCGCAGCAATACAATATTCAGCAAGTTCCACCACAGCTAGTTCAACAGCAAACATCATCTCCTCAGGCTCAAAGTGCTCCTCAAGTCGCTGTCTTGTATCCTCCATACTCTTCTCAGAAGCCTGCCAGTGCTACAACGGAGCCACTTCTGAGAAACATGGTTGTGCACTCGCCATACTCTTCACCTCAGCAGAAGCATCATGAAGCCATGCCTTCTTTTTATGGCCAAGGCAATACAGTTTTGCTTCCATCGACAGACCTTAACATCCAGCATCAGCAGCCACAACCATTGCAGCAACACGGCCTGAGCTCATGCCCACCTCAACCAAGCAAGCCCAACCACTGTAGTGTGGCATCCTATGCCGTTCAAGGTAGTGGCCAATCCTACAGCGCCACATTCAAGAATCCTTCTAACTGTGCTGCTACTGTTGTTGCTGTTCTGCCTCAGCATCCAGCGAGTGGTCCGATGGCATTTCATCATTTGGGACCACAAGTCGTGCATAATCAGCCATTTGGAAATATGTTTGAAACAGCTAGTGTGGTAGGGTATCCACGGGATCGAGTTGAGAGCGTAGCTCTCCCAGTGGTAACTGCAGCCCAACCTGCAGACTCTGTTGCCATGGCTGATAAG CTCAATGCAGGTAGCAATGTTACA TCCCCACGAGAATGGTCAGGTTAGTGCAGAATGA ACCAGTCATATTGAGATGTTTCACTGGTCTCACAAAGGATCT CCACTTCTAATATGGACTGGAAGCTTATCAGCTCTCCATAAGGCCACTTCAATCTGGCTTCCTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTTCAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATATGTCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTATGAATATATTTGACG                                       ]
[+] EMBL AU101448             [                                                                                                                                                                                                                                                                                                  CTGGAGCTCTACTGCTACAAGCTCGAGAGGTCCATCGGGGAGCTGCGCA NGACGTCATGGATTACCACAGCGAGGGGACGGTCAACTTCCGGTGCCTGGAGAAGAATCTGAGGCAGGTTCAAAAATCTGTGCAGATTCTGCAGGATAAGCATGAGATTTCAGAGACACCGAACGAGTTCTCCAAACTTCAAATAGCGCATGANTTCCCTGCTAGAGCAAATGAAGCCTCTGCTTTCTCAACATTCGGAAGGGAAAATGATCACAGCACACAAGTTGCAAAACATGAGGTTGCTTTCATGCCACTTCAGCAAGTTAATGCAATGCAATCTCCTGCTGTGCCAGTCCAAAGCAGCAATGGTTATATTTTGCAGCAACTAGTGCCTGTCTCTTTGAGCACACAACCAGATCAGCAGCAGCCGAGTCAAGCTGCCGTGTATTATATGCAAAGCCAAAATCCTATTAAGTGCACAGAGAGTGAACCATCAGAATCCGCGGTACATGTTATTCAGTCACAAATCCAGAATCCTGAAGCCAGGGTTGCAGTTGACCTNTCTCAGAAATCTAGCCAGGTGACAGAATTGTACCCTCAACCCCA GGACCAAAGGCTACATCTGCCTGCTCAGCAGGTTGAGTCACAAGCATGGCGAACACAGCCCCTTGTGGTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL C96900               [                                                                                                                                                                                                                                                                                                   TGGAGCTCTACTGCTACAAGCTCGAGAGGTCCATCGGGGAGCTGCGCA CGACGTCATGGATTACCACAGCGAGGGGACGGTCAACTTCCGGTGCCTGGAGAAGAATCTGAGGCAGGTTCAAAAATCTGTGCAGATTCTGCAGGATAAGCATGAGATTTCAGAGACACCGAACGAGTTCTCCAAACTTCAAATAGCGCATGAGTTCCCTGCTAGAGCAAATGAAGCCTCTGCTTTCTCAACATTCGGAAGGGAAAATGATCACAGCACACAAGTTGCAAAACATGAGGTTGCTTTCATGCCACTTCAGCAAGTTAATGCAATGCAATCTCCTGCTGTGCCAGTCCAAAGCAGCAATGGTTATATTTTGCAGCAACTAGTGCCTGTCTCTTTGAGCACACAACCAGATCAGCAGCAGCCGAGTCAAGCTGCCGTGTATTATATGCAAAGCCAAAATCCTATTAAGTGCACAGAGAGTGAACCATCAGAATCCGCGGTACATGTTATTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AU092407             [                                                                                                                                                                                                                                                                                                   TGGAGCTCTACTGCTACAAGCTCGAGAGGTCCATCGGGGAGCTGCGCA NGACGTCATGGATTACCACAGCGAGGGGACGGTCAACTTCCGGTGCCTGGAGAAGAATCTGAGGCAGGTTCAAAAATCTGTGCAGATTCTGCAGGATAAGCATGAGATTTCAGAGACACCGAACGAGTTCTCCAAACTTCAAATAGCGCATGAGTTCCCTGCTAGAGCAAATGAAGCCTCTGCTTTCTCAACATTCGGAAGGGAAAATGATCACAGCACACAAGTTGCAAAACATGAGGTTGCTTTCATGCCACTTCAGCAAGTTAATGCAATGCAATCTCCTGCTGTGCCAGTCCAAAGCAGCAATGGTTATATTTTGCAGCAACTAGTGCCTGTCTCTTTGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB640406             [                                                                                                                                                                                                                                                                                                       GCTCTACTGCTACAAGCTCGAGAGGTCCATCGGGGAGCTGCGCAGCGACGTCATGGATTACCACAGCGAGGGGACGGTCAACTTCCGGTGCCTGGAGAAGAATCTGAGGCAGGTTCAAAAATCTGTGCAGATTCTGCAGGATAAGCATGAGATTTCAGAGACACCGAACGAGTTCTCCAAACTTCAAATAGCGCATGAGTTCCCTGCTAGAGCAAATGAAGCCTCTGCTTTCTCAACATTCGGAAGGGAAAATGATCACAGCACACAAGTTGCAAAACATGAGGTTGCTTTCATGCCACTTCAGCAAGTTAATGCAATGCAATCTCCTGCTGTGCCAGTCCAAAGCAGCAATGGTTATATTTTGCAGCAACTAGTGCCTGTCTCTTTGAGCACACAACCAGATCAGCAGCAGCCGAGTCAAGCTGCCGTGTATTATATGCAAAGCCAAAATCCTATTAAGTGCACAGAGAGTGAACCATCAGAATCCGCGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AW069957             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               cggggcagGTACCCTCAAACCCAGGGACAAAAGGCTACATCTGCNTGCTCAGCAGGTTGAGTCACAAGCATGGCGAACACAGCCCCTTGTGGTGCAACCGCAGCAATACAATATTCAGCAAGTTCCACCACAGCTAGTTCAACAGCAAACATCATCTCCTCAGGCTCAAAGTGCTCCTCAAGTCGCTGTCTTGTATCCTCCATACTCTTCTCAGAAGCCTGCCAGTGCTACAACGGAGCCACTTCTGAGAAACATGGTTGTGCACTCGCCATACTCTTCACCTCAGCAGAAGCATCATGAAGCCATGCCTTCTTTTTATGGCCAAGGCAATACAGTTTTGCTTCCATCGACAGACCTTAACATCCAGCATCAGCAGCCACAACCATTGCAGCAACACGGCCTGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AU181155             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGTAGCTC NCCAGTGGTANCT CAGCCCAACCT CAGCCNCTGTTGCCAT GCTGATAAG CTCAATGCAGGTAGCAATGTTACANCCCCCACGAGAATGGTCAGGTTAGTGCAGAATGA ACCAGTCATATTGAGATGTTTCACTGGTCTCACAAAGGATCT CCACTTCTAATATGGACTGGAAGCTTATCAGCTCTCCATAAGGCCACTTCAATCTGGCTNCCTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTTCAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATATGTCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTATGAATATATTTGACGA                                      ]
[-] EMBL C26807               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCATGGCTGATAAGCCTCAATGCAGGTAGCAATGTTACA TCCCCACGAGAATGGTCAGGTTAGTGCAGAATGA ACCAGTCATATTGAGATG TTCACTGGTCTCACAAAGGATCT CCACTTCTAATATGGACTGGAAGCTTATCAGCTCTCCATAAGGCCACTTCAATCTGGCTTCCTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTTCAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATATGTCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTATGAATATATTTGACGA                                      ]
[+] EMBL AU161279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TAGCAATGTTACA TCCCCACGA AATGGTCAGGTTAGTGCAGAATGA ACCAGTCATATTGAGATG TTCACTGGTCTCACAAAGGGNCC CCACTTCTAATATGGACTGGAACCTTATCAGCNCTCCATAAGGCCACTTCAATCTGGCTTCCTTTTTTTTTAATTAGCCANCAGATTGGTGCAAATCCTTCTACTTTTTTTCAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATATGNCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTATGAATATATTTGACGAGTTTACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU029797             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          tacacccCCCCACGAGAATGGTCAGGTTAGTGCAGAATGACCCCAGTCATATTGAGATGTTTCACTGGTCTCACAAAGGATCTCCCACTTCTAATATGGACTGGAA NTTATCAGCTCTCCATAAGGCCACTTCAATCTGGCTTCCTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTTCAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATATGTCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTATGAATATATTTGACGAGTTTACACCAAAAAAAAAAAAA                ]




>consensus_12976#0
CGCCCGCGCCGACCATGGCGTCCCCCGCGCGCCCCGCCGCCGCCTCCGTCTCCGGCGCGT
TCGGCCTCCCCGCCGACCCCACCGCCGCCCGCTGCTCCTTCGACCAGTCGCGCCGCCGCC
CGGAGGATTTGCAGCAGGAGAAGAGGATGGTGAGGACGTTCGTGAACGTGTACGGTGGGC
AGGAGAGCTACACCAAGGAGGCGGTCATGGCGGCCGTGGAGGAGTGCATGAAGAAGCAGG
CCGAGGGCTTGCTGCATTCGCTCGAGGGAATCGGCGGCCGCCTGTCGCAGCTGGAGCTCT
ACTGCTACAAGCTCGAGAGGTCCATCGGGGAGCTGCGCAGCGACGTCATGGATTACCACA
GCGAGGGGACGGTCAACTTCCGGTGCCTGGAGAAGAATCTGAGGCAGGTTCAAAAATCTG
TGCAGATTCTGCAGGATAAGCATGAGATTTCAGAGACACCGAACGAGTTCTCCAAACTTC
AAATAGCGCATGAGTTCCCTGCTAGAGCAAATGAAGCCTCTGCTTTCTCAACATTCGGAA
GGGAAAATGATCACAGCACACAAGTTGCAAAACATGAGGTTGCTTTCATGCCACTTCAGC
AAGTTAATGCAATGCAATCTCCTGCTGTGCCAGTCCAAAGCAGCAATGGTTATATTTTGC
AGCAACTAGTGCCTGTCTCTTTGAGCACACAACCAGATCAGCAGCAGCCGAGTCAAGCTG
CCGTGTATTATATGCAAAGCCAAAATCCTATTAAGTGCACAGAGAGTGAACCATCAGAAT
CCGCGGTACATGTTATTCAGTCACAAATCCAGAATCCTGAAGCCAGGGTTGCAGTTGACC
TATCTCAGAAATCTAGCCAGGTGACAGAATTGTACCCTCAACCCCAGGACCAAAGGCTAC
ATCTGCCTGCTCAGCAGGTTGAGTCACAAGCATGGCGAACACAGCCCCTTGTGGTGCAAC
CGCAGCAATACAATATTCAGCAAGTTCCACCACAGCTAGTTCAACAGCAAACATCATCTC
CTCAGGCTCAAAGTGCTCCTCAAGTCGCTGTCTTGTATCCTCCATACTCTTCTCAGAAGC
CTGCCAGTGCTACAACGGAGCCACTTCTGAGAAACATGGTTGTGCACTCGCCATACTCTT
CACCTCAGCAGAAGCATCATGAAGCCATGCCTTCTTTTTATGGCCAAGGCAATACAGTTT
TGCTTCCATCGACAGACCTTAACATCCAGCATCAGCAGCCACAACCATTGCAGCAACACG
GCCTGAGCTCATGCCCACCTCAACCAAGCAAGCCCAACCACTGTAGTGTGGCATCCTATG
CCGTTCAAGGTAGTGGCCAATCCTACAGCGCCACATTCAAGAATCCTTCTAACTGTGCTG
CTACTGTTGTTGCTGTTCTGCCTCAGCATCCAGCGAGTGGTCCGATGGCATTTCATCATT
TGGGACCACAAGTCGTGCATAATCAGCCATTTGGAAATATGTTTGAAACAGCTAGTGTGG
TAGGGTATCCACGGGATCGAGTTGAGAGCGTAGCTCTCCCAGTGGTAACTGCAGCCCAAC
CTGCAGACTCTGTTGCCATGGCTGATAAGCTCAATGCAGGTAGCAATGTTACATCCCCAC
GAGAATGGTCAGGTTAGTGCAGAATGAACCAGTCATATTGAGATGTTTCACTGGTCTCAC
AAAGGATCTCCACTTCTAATATGGACTGGAAGCTTATCAGCTCTCCATAAGGCCACTTCA
ATCTGGCTTCCTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTT
CAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATAT
GTCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTAT
GAATATATTTGACGAGTTTACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12976#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 564
fasta sequence

                              [CACCTTAGGNGCATCAAGGCAATNAGNCTTAAAGGGGAAGTGTGTTTNNCTCGCACAGGNGGTCGNGGATTTTNATGGGACACATTGGATATCACCATTGGAAAAAGTNGAANAGTAGGTGTAGGTATCNACGGATNGAGTGGAGAGGTAGTNTCCCAGGGTAATGCAGCCNAACTGCAGATTNTGTGCCATGGTGATAAGTCAATGCAGGTAGCAATGTAACATCCCCACGAGAATGGTCAGGTTAGTGCAGAATGAACCAGTCATATTGAGATGTTTCACTGGTCTCACAAAGGATCTCCATTCTAATATGGACTGGAAGCTTATCAGCTCTCCATAAGGCCACTTCAATCTGGCTTCCTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTTCAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATATGTCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTATGAATATATTTGACGAGTTTACACCAAAAAAAAAA]

[-] EMBL AA753517             [CACCTTAGGNGCATCAAGGCAATNAGNCTTAAAGGGGAAGTGTGTTTNNCTCGCACAGGNGGTCGNGGATTTTNATGGGACACATTGGATATCACCATTGGAAAAAGTNGAANAGTAGGTGTAGGTATCNACGGATNGAGTGGAGAGGTAGTNTCCCAGGGTAATGCAGCCNAACTGCAGATTNTGTGCCATGGTGATAAGTCAATGCAGGTAGCAATGTAACATCCCCACGAGAATGGTCAGGTTAGTGCAGAATGAACCAGTCATATTGAGATGTTTCACTGGTCTCACAAAGGATCTCCATTCTAATATGGACTGGAAGCTTATCAGCTCTCCATAAGGCCACTTCAATCTGGCTTCCTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTTCAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATATGTCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTATGAATATATTTGACGAGTTTACACCAAAAAAAAAA]




>consensus_12976#1
CACCTTAGGNGCATCAAGGCAATNAGNCTTAAAGGGGAAGTGTGTTTNNCTCGCACAGGN
GGTCGNGGATTTTNATGGGACACATTGGATATCACCATTGGAAAAAGTNGAANAGTAGGT
GTAGGTATCNACGGATNGAGTGGAGAGGTAGTNTCCCAGGGTAATGCAGCCNAACTGCAG
ATTNTGTGCCATGGTGATAAGTCAATGCAGGTAGCAATGTAACATCCCCACGAGAATGGT
CAGGTTAGTGCAGAATGAACCAGTCATATTGAGATGTTTCACTGGTCTCACAAAGGATCT
CCATTCTAATATGGACTGGAAGCTTATCAGCTCTCCATAAGGCCACTTCAATCTGGCTTC
CTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTTCAGCTGAAGG
GTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATATGTCCTCACTT
TTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTATGAATATATTT
GACGAGTTTACACCAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12976#0      CGCCCGCGCCGACCATGGCGTCCCCCGCGCGCCCCGCCGCCGCCTCCGTCTCCGGCGCGT 60
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      TCGGCCTCCCCGCCGACCCCACCGCCGCCCGCTGCTCCTTCGACCAGTCGCGCCGCCGCC 120
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      CGGAGGATTTGCAGCAGGAGAAGAGGATGGTGAGGACGTTCGTGAACGTGTACGGTGGGC 180
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      AGGAGAGCTACACCAAGGAGGCGGTCATGGCGGCCGTGGAGGAGTGCATGAAGAAGCAGG 240
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      CCGAGGGCTTGCTGCATTCGCTCGAGGGAATCGGCGGCCGCCTGTCGCAGCTGGAGCTCT 300
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      ACTGCTACAAGCTCGAGAGGTCCATCGGGGAGCTGCGCAGCGACGTCATGGATTACCACA 360
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      GCGAGGGGACGGTCAACTTCCGGTGCCTGGAGAAGAATCTGAGGCAGGTTCAAAAATCTG 420
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      TGCAGATTCTGCAGGATAAGCATGAGATTTCAGAGACACCGAACGAGTTCTCCAAACTTC 480
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      AAATAGCGCATGAGTTCCCTGCTAGAGCAAATGAAGCCTCTGCTTTCTCAACATTCGGAA 540
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      GGGAAAATGATCACAGCACACAAGTTGCAAAACATGAGGTTGCTTTCATGCCACTTCAGC 600
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      AAGTTAATGCAATGCAATCTCCTGCTGTGCCAGTCCAAAGCAGCAATGGTTATATTTTGC 660
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      AGCAACTAGTGCCTGTCTCTTTGAGCACACAACCAGATCAGCAGCAGCCGAGTCAAGCTG 720
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      CCGTGTATTATATGCAAAGCCAAAATCCTATTAAGTGCACAGAGAGTGAACCATCAGAAT 780
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      CCGCGGTACATGTTATTCAGTCACAAATCCAGAATCCTGAAGCCAGGGTTGCAGTTGACC 840
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      TATCTCAGAAATCTAGCCAGGTGACAGAATTGTACCCTCAACCCCAGGACCAAAGGCTAC 900
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      ATCTGCCTGCTCAGCAGGTTGAGTCACAAGCATGGCGAACACAGCCCCTTGTGGTGCAAC 960
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      CGCAGCAATACAATATTCAGCAAGTTCCACCACAGCTAGTTCAACAGCAAACATCATCTC 1020
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      CTCAGGCTCAAAGTGCTCCTCAAGTCGCTGTCTTGTATCCTCCATACTCTTCTCAGAAGC 1080
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      CTGCCAGTGCTACAACGGAGCCACTTCTGAGAAACATGGTTGTGCACTCGCCATACTCTT 1140
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      CACCTCAGCAGAAGCATCATGAAGCCATGCCTTCTTTTTATGGCCAAGGCAATACAGTTT 1200
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      TGCTTCCATCGACAGACCTTAACATCCAGCATCAGCAGCCACAACCATTGCAGCAACACG 1260
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      GCCTGAGCTCATGCCCACCTCAACCAAGCAAGCCCAACCACTGTAGTGTGGCATCCTATG 1320
consensus_12976#1      ------------------------------------------------------------
                                                                                   

consensus_12976#0      CCGTTCAAGGTAGTGGCCAATCCTACAGCGCCACATTCAAGAATCCTTCTAACTGTGCTG 1380
consensus_12976#1      ---------------------------------CACCTTAGGNGC-----ATCAAGGCAA 22
                                                        **    **   *     * *   **  

consensus_12976#0      CTACTGTTGTTGCTGTTCTGCCTCAGCATCCAGCGAGTGGTCCGATGGCATTTCATCATT 1440
consensus_12976#1      TNAGNCTTAAAGGGGAAGTGTGTTTNNCTCGCACAGGNGGTC--GNGGATTTTNA----- 75
                         *   **   *  *   **  *     **   *  * ****    **  *** *     

consensus_12976#0      TGGGACCACAAGTCGTGCATAATCAGCCATTTGGAAATATGTTTGAAACAGCTAGTGTGG 1500
consensus_12976#1      TGGGA---CACATTGGATATCACCA-----TTGGAAAAA---GTNGAANAGTAGGTGTAG 124
                       *****   **  * *   ** * **     ******* *    *  ** **   **** *

consensus_12976#0      TAGGGTATCCACGGGATCGAGTTGAGAGCGTAGCTCTCCCAGTGGTAACTGCAGCCCAAC 1560
consensus_12976#1      ----GTATCNACGG-ATNGAGTGGAGAG-GTAG-TNTCCCAG-GGTAA-TGCAGCCNAAC 175
                           ***** **** ** **** ***** **** * ****** ***** ******* ***

consensus_12976#0      CTGCAGACTCTGTTGCCATGGCTGATAAGCTCAATGCAGGTAGCAATGTTACATCCCCAC 1620
consensus_12976#1      -TGCAGATTNTGT-GCCATGG-TGATAAG-TCAATGCAGGTAGCAATGTAACATCCCCAC 231
                        ****** * *** ******* ******* ******************* **********

consensus_12976#0      GAGAATGGTCAGGTTAGTGCAGAATGAACCAGTCATATTGAGATGTTTCACTGGTCTCAC 1680
consensus_12976#1      GAGAATGGTCAGGTTAGTGCAGAATGAACCAGTCATATTGAGATGTTTCACTGGTCTCAC 291
                       ************************************************************

consensus_12976#0      AAAGGATCTCCACTTCTAATATGGACTGGAAGCTTATCAGCTCTCCATAAGGCCACTTCA 1740
consensus_12976#1      AAAGGATCTCCA-TTCTAATATGGACTGGAAGCTTATCAGCTCTCCATAAGGCCACTTCA 350
                       ************ ***********************************************

consensus_12976#0      ATCTGGCTTCCTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTT 1800
consensus_12976#1      ATCTGGCTTCCTTTTTTTTTAATTAGCCAGCAGATTGGTGCAAATCCTTCTACTTTTTTT 410
                       ************************************************************

consensus_12976#0      CAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATAT 1860
consensus_12976#1      CAGCTGAAGGGTCAATCTGAATAAGAATGGTAGATTAGTTAAGTGATGATGCTAGCATAT 470
                       ************************************************************

consensus_12976#0      GTCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTAT 1920
consensus_12976#1      GTCCTCACTTTTAATGGACATACCTGCTTGTAACCTGGTAAACTTATGTCTTTGCGGTAT 530
                       ************************************************************

consensus_12976#0      GAATATATTTGACGAGTTTACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1973
consensus_12976#1      GAATATATTTGACGAGTTTACACCAAAAAAAAAA------------------- 564
                       **********************************