These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12978#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1616 fasta sequence [GAGGGGAAGAAACAGGAGCTACTACTCCGCCGTTCCGGCAGCAGCGCAGCCATGCAGCGCTCACCGGTGGACAAACCGCCGTTCACGCTGGGGGACATAAAGAAGGCCATCCCGCCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCACGACCTTGCCATCGCCGCTGGCCTCCTCTACTTTGCTCTGGTCGGCATCCCTGCCCTCCCAAGCATCCTCCGCCTCGTCGCCTGGCCGCTCTACTGGGCCGCGCAGGGCAGTGTACTCACCGGCGTGTGGGTCATCGGGCACGAGTGTGGCCACCACGCCTTCTCGGACTACTTGCTCCTCGACAACCTCGTGGGCCTAGTGCTCCACTCGGCGCTTCTCACGCCCTTCTTCTCGTGGAAGTACAGCCACCGGCGGCACCACGCCAACACCGGCTCCATGGAGAAAGACGAGGTGTACGTCGCGAAGAAGAAGTCCGCGCTGCCGTGGTACACCCCGTACGTGTTCGGCAACCCCGTCGGGCGGCTGGTGTACATCGCCCTGCAGCTCACCCTCGCGTGGCCACTCTACCTCGCGTTCAACCTGTCCGGGCAGCCGTACCCACGCCTCGTCACCTGCCACTACGACCCCTACAGCCCGCTGTTCAGCGACCAGGAGCGCGTCCAAGTCCTCGTCTCCGACGCCGCCATCCTGGCCGTGCTGCTCGCGCTGCACAGGCTGACGGCGGCGTACGGGCTCTGGTGGGTGGTGCGCGTGTACGGCGTGCCGGTGATGATCGTGGGCGCGCTGTTCGTGCTCATCACGTACCTGCACCACACCCACCGGGCGCTCCCGCACTACGACTCCAGCGAGTGGGAGTGGCTGCGTGGCTCGCTCGCCACCGTCGACCGCGACTACGGCGTCCTCAACCGCGTGCTGCACAACGTCACGGACACGCACGTCCTCCACCACCTCTTCCCCAGCATGCCACACTACCACGCCATGGAGGCCACCAGGGCAGCGAGGCCCGTCCTCGGTGAGTACTACAAGTTTGACCGCACGCCCATCATCGAGGCAACATGGCGTGAGGCCAAGGAGTGCATGTACGTTGAGCCCAGGGAGCGCGATG-GTATCTACTGGTACAACAACAAGTTTTAGCTACAGACA-GGGGATGAAATTAAGAT-ATGATTATAAGTTTTATATACTTGGGTATGTCA-CTGCTTCTGAATAAATATGGTGCTGGTCT-CACAATAATTAATTAAGGGGACCGGCCAACACA-TTTTAGCTTATCGGTCTCACA-AATCGTGGACCTTAGTCCATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAATAATCTGCCACCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGA-A-AATCATGTTTTGCATGAGACATGGTTTATACACAACATCCAATACATCATGTGAGATAAGTAGCATTAAATTTAAGTATGGAATGGTGGTGTTTGCATTGTAAGAGTAGTGTCTAGTACTAGTTTCTTGATGATGAGGAGTTTATAAAAACTATGTCTATTGTCTTGGGTTGAGAAAAACATTACAGTATTCAAATC-ATAATCATTATTGTCCAAAAA] [+] EMBL AK105371 [GAGGGGAAGAAACAGGAGCTACTACTCCGCCGTTCCGGCAGCAGCGCAGCCATGCAGCGCTCACCGGTGGACAAACCGCCGTTCACGCTGGGGGACATAAAGAAGGCCATCCCGCCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCACGACCTTGCCATCGCCGCTGGCCTCCTCTACTTTGCTCTGGTCGGCATCCCTGCCCTCCCAAGCATCCTCCGCCTCGTCGCCTGGCCGCTCTACTGGGCCGCGCAGGGCAGTGTACTCACCGGCGTGTGGGTCATCGGGCACGAGTGTGGCCACCACGCCTTCTCGGACTACTTGCTCCTCGACAACCTCGTGGGCCTAGTGCTCCACTCGGCGCTTCTCACGCCCTTCTTCTCGTGGAAGTACAGCCACCGGCGGCACCACGCCAACACCGGCTCCATGGAGAAAGACGAGGTGTACGTCGCGAAGAAGAAGTCCGCGCTGCCGTGGTACACCCCGTACGTGTTCGGCAACCCCGTCGGGCGGCTGGTGTACATCGCCCTGCAGCTCACCCTCGCGTGGCCACTCTACCTCGCGTTCAACCTGTCCGGGCAGCCGTACCCACGCCTCGTCACCTGCCACTACGACCCCTACAGCCCGCTGTTCAGCGACCAGGAGCGCGTCCAAGTCCTCGTCTCCGACGCCGCCATCCTGGCCGTGCTGCTCGCGCTGCACAGGCTGACGGCGGCGTACGGGCTCTGGTGGGTGGTGCGCGTGTACGGCGTGCCGGTGATGATCGTGGGCGCGCTGTTCGTGCTCATCACGTACCTGCACCACACCCACCGGGCGCTCCCGCACTACGACTCCAGCGAGTGGGAGTGGCTGCGTGGCTCGCTCGCCACCGTCGACCGCGACTACGGCGTCCTCAACCGCGTGCTGCACAACGTCACGGACACGCACGTCCTCCACCACCTCTTCCCCAGCATGCCACACTACCACGCCATGGAGGCCACCAGGGCAGCGAGGCCCGTCCTCGGTGAGTACTACAAGTTTGACCGCACGCCCATCATCGAGGCAACATGGCGTGAGGCCAAGGAGTGCATGTACGTTGAGCCCAGGGAGCGCGATG GTATCTACTGGTACAACAACAAGTTTTAGCTACAGACA GGGGATGAGATTAAGAT ATGATTATAAGTTTTATATACTTGGGTATGTCA CTGCTTCTGAATAAATATGGTGCTGGTCT CACAATAATTAATTAAGGGG ] [+] EMBL BI810602 [ gaGCCAAGGAGTGCATGTACGTTGAGCCCAGGGAGCGCGATG GTATCTACTGGTACAACAACAAGTTTTAGCTACAGACACGGGGATGAAATTAAGAT ATGATTATAAGTTTTATATACTTGGGTATGTCACCTGCTTCTGAATAAATATGGTGCTGGTCTCCACCATAATTAATTAAGGGGACC GCCAACACACTTTTAGCTTATCGGTCTCACACAATCGTGGACCTTAGTCCATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAATAATCTGCCACCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGA A AATCATGTTTTGCATGAGACATGGTTTATACAC ACATCC ATACATCATGTGAGATAAGTAGCATTAAATTTAAGTATGGAATGGTGGTGTTTGCCTTGTAAGAGTAGTGTCTAGTACTAGTTTCTTGATGATGAGGAGTTTATAAAAACTATGTCTATTGTCTTGGGTTGAGAAAAAaa ] [+] EMBL BI810786 [ CGTTGACCCCAGGGAGCTCGATGTTTATCTACTGGTACAAC ACAAGTTTTAGCTACAGACACGGGGATGAAATTAAGAT ATGATTATAAGTTTTATATACTTGGTTATGTCA CTGCTTCTGAATAAATATGGTGCTGGTCT CACCATAATTAATTAAGGGGACCGGCC ACACA TTTTAGCTTATCGGTCTCAC AATCGTGGACCTTAGTCCATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAATAATCTGCCACCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGA A AATCATGTTTTGCATGAGACATGGTTTATACACAACATCCAATACATCATGTGAGATAAGTA CATTAAATTTAAGTATGGAATGGTGGTGTTT CTTTGTAAGAGTAGTGTCTAGTACTAGTTTCTTGATGATGAGGAGTTTATAAAAACTATGTCTATTGTCTTGGGTTGAGAAAAAgaa ] [+] EMBL BM419625 [ ccgGCTACAGACA GGGGATGAAATTAAGAT ATGATTATAAGTTTTATATACTTGGGTATGTCA CTGCTTCTGAATAAATATGGTGCTGGTCT CACAATAATTAATTAAGGGGACCGGCCAACACA TTTTAGCTTATCGGTCTCACA AATCGTGGACCTTAGTCCATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAATAATCTGCCACCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGA A AATCATGTTTTGCATGAGACATGGTTTATACACAACATCCAATACATCATGTGAGATAAGTAGCATTAAATTTAAGTATGGAATGGTGGTGTTTGCATTGTAAGAGTAGTGTCTAGTACTAGTTTCTTGATGATGAGGAGTTTATAAAAACTATGTCTATTGTCTTGGGTTGAGAATGGCCTTACAGTATTCAAATC ATAATCATTATTGTCCAAAAA] [+] EMBL BM419313 [ tccgGCTACAGACA GGGGATGAAATTAAGATGATGATTATAAGTTTTATATACTTGGGTATGTCA CTGCTTCTGAATAAATATGGTGCTGGTCT CAC ATAATTAATTAAGGGGACCGGCC ACACA TTTTAGCTTATCGGTCTCAC AATCGTGGACCTTAGTCCATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAANAATCTGCCACCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGATATAATCATGTTTTGCATGAGACATGGTTTATACACCACATCCCATACATCATGTGAGATAAGTAGCATTAAATTTAAGTATGGAATGGTGGTGTTTGCATTGTAAGAGTAGTGTCTAGTACTAGTTTCTTGATGATGAGGAGTTTATAAAAACTATGTCTANTGTCTTGGGTTGAG AATGCCTTACANNATTC AATCAATAATCATTATTGTCC ] consensusID : consensus_12978#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1480 fasta sequence [GTGTTGACTGATTGCTTCGTGTAATTGCGGTCAGCAGCAGTACGTATGGGTACCAGCAGCCGGCCGACGACGGTGAAGGAGGGGAAGAAACTAGAGGCGCCCCGCCGTGCCGGCAGCCATGCAGCCGTGAAGCGCTCTCCGGTGGACAAGCCGCCGTTCACGCTGGGCGACATCAGAAAGGCCATCCCACCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCACGACCTTGCCATTGCCGCGGGCCTCCTCTACTTTGCTCTGGTCGTCATCCCTGCCCTCCCAGGCGTCCTCCGCCTCGTCGCCTGGCCGTTCTACTGGGCCGCGCAGGGGTGCTTCCTGTTCGGGGTGTGGATCATCGCGCACGAGTGCGGGCACCACGCGTTCTCGGGCCACGCACTCCTCGACGACACCCTCGGCCTGGTCCTGCACTCATGGCTCCTAGCGCCATACTTCTCGTGGAAATACACCCACCAACGGCACCACTCCAACACCAGCTCACAGGAGCGCGACGAGGTGTTCGTCCCCAGGTTCAAGTCCGACCTGCCGTGGTACTCCCCATACGTGTACAAGTACAACAACCCCGTCGCTCGGCTGCTGCTCCTCGTCGTGCAGCTCACCGTCGGGTGGCCGATGTATTTGGTGTTCAACACCTGGGGTCGCCAGTACCCAAGGTTCGCCAGCCACTTCGATCCCTCTGGGCCCATCTACAAGGGGCGGGAGCGCGTCTTCATCGCCATCTCGGACATCGGCATGCTGGCCGTGTCGCTCGCGCTGTACAGGCTTGCGGAGGGTTACGGGTTTTGGTGGGTGGTGCGCGTCTACGGCGTGCCGCTGCTTGTCGTCAACGCGTGGCTTGTGGT-CGTCACGTACCTGCATCACACTCA-CCGGGCGATCCCACA-CTA-CGACTCCAGCGAGTGGGACTGGTTGCG-CGGGGCGCTCGCCA-CCGTGGACCGCGACTACGGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACGCACGTCCTGCACCACCTCT-TCCCTGCCATCCCGCACTACCACGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCG-TTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA-CAAGGGCATCTTCTGGTACAGCAACAAGTTCTAGTTCCTGCAGCAACGTC-AGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCT-ACTTGAAGTCTTGAATTAATTGT-AAACTCAAATGATATTCT-C-AATAAAAAAGAAAAATGCCTCTCTAAAAAAAATGCAATTCCTTAACTGTCTGTAATAGGGAGCGCCATAAATGCAGCTAAAAATTACAAGAATTACTCTATTTATGCTTGGTTTCATTACGATACAAAA] [+] EMBL AK070559 [GTGTTGACTGATTGCTTCGTGTAATTGCGGTCAGCAGCAGTACGTATGGGTACCAGCAGCCGGCCGACGACGGTGAAGGAGGGGAAGAAACTAGAGGCGCCCCGCCGTGCCGGCAGCCATGCAGCCGTGAAGCGCTCTCCGGTGGACAAGCCGCCGTTCACGCTGGGCGACATCAGAAAGGCCATCCCACCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCACGACCTTGCCATTGCCGCGGGCCTCCTCTACTTTGCTCTGGTCGTCATCCCTGCCCTCCCAGGCGTCCTCCGCCTCGTCGCCTGGCCGTTCTACTGGGCCGCGCAGGGGTGCTTCCTGTTCGGGGTGTGGATCATCGCGCACGAGTGCGGGCACCACGCGTTCTCGGGCCACGCACTCCTCGACGACACCCTCGGCCTGGTCCTGCACTCATGGCTCCTAGCGCCATACTTCTCGTGGAAATACACCCACCAACGGCACCACTCCAACACCAGCTCACAGGAGCGCGACGAGGTGTTCGTCCCCAGGTTCAAGTCCGACCTGCCGTGGTACTCCCCATACGTGTACAAGTACAACAACCCCGTCGCTCGGCTGCTGCTCCTCGTCGTGCAGCTCACCGTCGGGTGGCCGATGTATTTGGTGTTCAACACCTGGGGTCGCCAGTACCCAAGGTTCGCCAGCCACTTCGATCCCTCTGGGCCCATCTACAAGGGGCGGGAGCGCGTCTTCATCGCCATCTCGGACATCGGCATGCTGGCCGTGTCGCTCGCGCTGTACAGGCTTGCGGAGGGTTACGGGTTTTGGTGGGTGGTGCGCGTCTACGGCGTGCCGCTGCTTGTCGTCAACGCGTGGCTTGTGGT CGTCACGTACCTGCATCACACTCA CCGGGCGATCCCACA CTA CGACTCCAGCGAGTGGGACTGGTTGCG CGGGGCGCTCGCCA CCGTGGACCGCGACTACAGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACACACGTCGTGCACCACCTGT TCCCTACCATCCCGCACTACCACGCTGTGGAGGCGACCAAGGCGATCCGCCCTATCCTCGGCGAGTACTACCAGTTCGATCCCACACCCATCG TCAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA CAAGGGCGTCTTCTGGTACAGCAACAAGTTCTAGTACCTGTAGCAGCGGCAAGCGGGCGTATAGGAAGGGCTGACAGAATTAGCCATGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCT ACTTGAAGTCTTGAATTAATTGT AAACTCAAA ] [+] EMBL BM419327 [ tnTACGGCGTGCC CTGCTTGTCGTC ACGCGTGGCTTGTGGT CGTCACGTACCTGCATCACACTCA CCGGGCGATCCCACA CTA CGACTCCAGCGAGTGGGACTGGTTGCG CGGGGCGCTCGCCA CCGTGGACCGCGACTACGGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACGCACGTCCTGCACCACCTCT TCCCTGCCATCCCGCACTACCACGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCG TTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA CAAGGGCATCTTCTGGTACAGCAACAAGTTCTAGTTCCTGCAGCAACGTC AGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCT ACTTGAAGTCTTGAATTAATCGTNCAACTCAAATGATATTCT C AATAAAAA ] [+] EMBL BM421364 [ gtcCAACGCGTGGCTTGTGGTGCGTCACGTACCTGCATCACACTCACCCGGGCGATCCCACACCTATCGACTCCAGCGAGTGGGACTGGTTGCGCCGGGGCGCTCGCCACCCGTGGACCGCGACTACGGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACGCACGTCCTGCACCACCTCT TCCCTGCCATCCCGCACTACCACGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCG TTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCACCAAGGGCATCTTCTGGTACAGCCACAAGTTCTAGTTCCTGCAGCAACGTC AGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCT ACTTGAAGTCTTGAATTAATTGT AAACTC AATGATATTCTCC AATAAAAAAGAAAAATGCCTCTCTAAAAAAAA ] [+] EMBL BM421365 [ CGAGTGGGACT GTTGC CGGGGCGCTCGCCA CCGTGGACCGCGANTACGGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACGCACGTCCTGCACCACCTCTGTCCCTGCCATCCCGCACTACCACGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCGTTTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA CAAGGGCATCTTCTGGTACAGCAACAAGTTCTAGTTCCTGCAGCAACGTC AGCGGGCGTATAGGAAGGGCTGACAGAATAA CCGT TC GTCTT CCTCATCGCTTCATCTAAACCCATAATCT ACTTGAAGTCTTGAATTAATTGT AAACTCAAATGATATTCT CAAATAAAAAAGAAAAATCCCTCTCTAAAAAA ] [+] EMBL BI810284 [ ccgGGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACGCACGTCCTGCACCACCTCT TCCCTGCCATCCCGCACTACCACGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCG TTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA CAAGGGCATCTTCTGGTACAGC ACAAGTTCTAGTTCCTGCAGCAACGTC AGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCT ACTTGAAGTCTTGAATTAATTGT AAACTCAAATGATATTCT C AATAAAAAAGAAAAATGCCTCTCTATAAAAA ] [+] EMBL BM038879 [ CACGGACACGCACGTCCTGCACCACCTCT TCCCTGCCATCCCGCACTACCAC CGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCG TTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA CAAGGGCATCTTCTGGTACAGC ACAAGTTCTAGTTCCTGCAGCAACGTC AGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCTGACTTGAAGTCTTGAATTAATTGT AAACTCAAATGATATTCT C AATAAAAAAGAAAAATGCCTCTCTATATATCTTGCAATTCCTTAACTGTCTGTAATAGGGAGCGCCATAAATGCAGCTAAAAATTACAAGAATTACTCTATTTATGCTTGGTTTCATTACGATACAAAA] consensusID : consensus_12978#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence [CGGACATCGGCCATNTGCCGGTGTCGCTCGGCCCTGTACTGGTCTTTCCGGATGGGTTNCGGGNGTTTTTGGTNNNGNTTGGGTNGCGCTGTCTACGCCGTGCCGCCTGCTTTGTCGTCACGCGTGGCTTGTGGTTCGTCACGTACCTGCATCACACTCACCGGCGATCCCACACTACGACTCCAGCGAGTGGGACTGGTTGCGCGGGGCGCTCGCCACCGTGGATCCGCGACTACGGCTTCCTTAACCGAGTGTGTTCACAACATCACGGACACGCACTGTCCTGCACCACCTCTTCCCTGCCATCCCGCACTACCANCGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCGTTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCACAAGGGCATCTTCTGGTACACNCCAACAANTTCTAGTTCCTGCAGCAACGTCATGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCTACTTGAAGTCTTGAATTAATTGTAAACTCAATGATATTCTCCACCCCCAAGAAAATGCCTCTCTATAAAAAA] [+] EMBL BM038190 [CGGACATCGGCCATNTGCCGGTGTCGCTCGGCCCTGTACTGGTCTTTCCGGATGGGTTNCGGGNGTTTTTGGTNNNGNTTGGGTNGCGCTGTCTACGCCGTGCCGCCTGCTTTGTCGTCACGCGTGGCTTGTGGTTCGTCACGTACCTGCATCACACTCACCGGCGATCCCACACTACGACTCCAGCGAGTGGGACTGGTTGCGCGGGGCGCTCGCCACCGTGGATCCGCGACTACGGCTTCCTTAACCGAGTGTGTTCACAACATCACGGACACGCACTGTCCTGCACCACCTCTTCCCTGCCATCCCGCACTACCANCGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCGTTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCACAAGGGCATCTTCTGGTACACNCCAACAANTTCTAGTTCCTGCAGCAACGTCATGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCTACTTGAAGTCTTGAATTAATTGTAAACTCAATGATATTCTCCACCCCCAAGAAAATGCCTCTCTATAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12978#1 GTGTTGACTGATTGCTTCGTGTAATTGCGGTCAGCAGCAGTACGTATGGGTACCAGCAGC 60 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 ------------------------------------------------------------ consensus_12978#1 CGGCCGACGACGGTGAAGGAGGGGAAGAAACTAGAGGCGCCCCGCCGTGCCGGCAGCCAT 120 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 ---------------GAGGGGAAGAAACAGGAGCTACTACTCCGCCGTTCCGGCAGCAGC 45 consensus_12978#1 GCAGCCGTGAAGCGCTCTCCGGTGGACAAGCCGCCGTTCACGCTGGGCGACATCAGAAAG 180 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 GCAGCCATGCAGCGCTCACCGGTGGACAAACCGCCGTTCACGCTGGGGGACATAAAGAAG 105 consensus_12978#1 GCCATCCCACCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCAC 240 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 GCCATCCCGCCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCAC 165 consensus_12978#1 GACCTTGCCATTGCCGCGGGCCTCCTCTACTTTGCTCTGGTCGTCATCCCTGCCCTCCCA 300 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 GACCTTGCCATCGCCGCTGGCCTCCTCTACTTTGCTCTGGTCGGCATCCCTGCCCTCCCA 225 consensus_12978#1 GGCGTCCTCCGCCTCGTCGCCTGGCCGTTCTACTGGGCCGCGCAGGGGTGCTTCCTGTTC 360 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 AGCATCCTCCGCCTCGTCGCCTGGCCGCTCTACTGGGCCGCGCAGGGCAGTGTACTCACC 285 consensus_12978#1 GGGGTGTGGATCATCGCGCACGAGTGCGGGCACCACGCGTTCTCGGGCCACGCACTCCTC 420 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 GGCGTGTGGGTCATCGGGCACGAGTGTGGCCACCACGCCTTCTCGGACTACTTGCTCCTC 345 consensus_12978#1 GACGACACCCTCGGCCTGGTCCTGCACTCATGGCTCCTAGCGCCATACTTCTCGTGGAAA 480 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 GACAACCTCGTGGGCCTAGTGCTCCACTCGGCGCTTCTCACGCCCTTCTTCTCGTGGAAG 405 consensus_12978#1 TACACCCACCAACGGCACCACTCCAACACCAGCTCACAGGAGCGCGACGAGGTGTTCGTC 540 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 TACAGCCACCGGCGGCACCACGCCAACACCGGCTCCATGGAGAAAGACGAGGTGTACGTC 465 consensus_12978#1 CCCAGGTTCAAGTCCGACCTGCCGTGGTACTCCCCATACGTGTACAAGTACAACAACCCC 600 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 GCGAAGAAGAAGTCCGCGCTGCCGTGGTACACCCCGTACGTGTTCGG------CAACCCC 519 consensus_12978#1 GTCGCTCGGCTGCTGCTCCTCGTCGTGCAGCTCACCGTCGGGTGGCCGATGTATTTGGTG 660 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 GTCGGGCGGCTGGTGTACATCGCCCTGCAGCTCACCCTCGCGTGGCCACTCTACCTCGCG 579 consensus_12978#1 TTCAACACCTGGGGTCGCCAGTACCCAAGGTTCGCCA---GCCACTTCGATCCCTCTGGG 717 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 TTCAACCTGTCCGGGCAGCCGTACCCACGCCTCGTCACCTGCCACTACGACCCCTACAGC 639 consensus_12978#1 CCCATCTACAAGGGGCGGGAGCGCGTCTTCATCG-CCATCT-CGGACATCGGCATGCTGG 775 consensus_12978#2 -------------------------CGGACATCGGCCATNTGCCGGTGTCGCTCGGCC-- 33 consensus_12978#0 CCGCTGTTCAGCGACCAGGAGCGCGTCCAAGTCC-TCGTCT-CCGACGCCGCCATCCTGG 697 ** * * * * * ** * consensus_12978#1 CCGTGTCGCTCGCGCTGTACAGGCTTGCGGAGGGTTACGGGTTTTGGTGGGTGGTGCGCG 835 consensus_12978#2 CTGTACTGGTCTTTCCGGATGGG-TTNCGGGNGTTTTTGGTNNNGNTTGGGTNGCGC-TG 91 consensus_12978#0 CCGTGCTGCTCGCGCTGCACAGGCTGACGGCGGCGTACGGGCTCTGGTGGGTGGTGCGCG 757 * ** * ** * * * ** * *** * * ** ***** * ** * consensus_12978#1 TCTACGGCGTGCCGC-TGCTT-GTCGTCAACGCGTGGCTTGTGGT-CGTCACGTACCTGC 892 consensus_12978#2 TCTACGCCGTGCCGCCTGCTTTGTCGTCA-CGCGTGGCTTGTGGTTCGTCACGTACCTGC 150 consensus_12978#0 TGTACGGCGTGCCGG-TGATG-ATCGTGGGCGCGCTGTTCGTGCT-CATCACGTACCTGC 814 * **** ******* ** * **** **** * * *** * * ************ consensus_12978#1 ATCACACTCACCGGGCGATCCCACACTACGACTCCAGCGAGTGGGACTGGTTGCGCGGGG 952 consensus_12978#2 ATCACACTCACCGG-CGATCCCACACTACGACTCCAGCGAGTGGGACTGGTTGCGCGGGG 209 consensus_12978#0 ACCACACCCACCGGGCGCTCCCGCACTACGACTCCAGCGAGTGGGAGTGGCTGCGTGGCT 874 * ***** ****** ** **** *********************** *** **** ** consensus_12978#1 CGCTCGCCACCGTGGA-CCGCGACTACGGCTTCCTTAACCGAGTGT-TTCACAACATCAC 1010 consensus_12978#2 CGCTCGCCACCGTGGATCCGCGACTACGGCTTCCTTAACCGAGTGTGTTCACAACATCAC 269 consensus_12978#0 CGCTCGCCACCGTCGA-CCGCGACTACGGCGTCCTCAACCGCGTGC-TGCACAACGTCAC 932 ************* ** ************* **** ***** *** * ****** **** consensus_12978#1 GGACACGCAC-GTCCTGCACCACCTCTTCCCTGCCATCCCGCACTACCAC-GCGGTGGAG 1068 consensus_12978#2 GGACACGCACTGTCCTGCACCACCTCTTCCCTGCCATCCCGCACTACCANCGCGGTGGAG 329 consensus_12978#0 GGACACGCAC-GTCCTCCACCACCTCTTCCCCAGCATGCCACACTACCAC-GCCATGGAG 990 ********** ***** ************** *** ** ******** ** ***** consensus_12978#1 GCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTC 1128 consensus_12978#2 GCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTC 389 consensus_12978#0 GCCACCAGGGCAGCGAGGCCCGTCCTCGGTGAGTACTACAAGTTTGACCGCACGCCCATC 1050 ** **** *** * ******** ** ********* **** ** * *** *** ** consensus_12978#1 GTTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCACAAG 1188 consensus_12978#2 GTTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCACAAG 449 consensus_12978#0 ATCGAGGCAACATGGCGTGAGGCCAAGGAGTGCATGTACGTTGAGCCCAGGGAGCGCGAT 1110 * **** * ****** ***** *********** *** * ** ** *** * * * consensus_12978#1 GGCATCTTCTGGTACAGC--AACAAGTTCTAGTTCC----------TGCAGCAACGTCA- 1235 consensus_12978#2 GGCATCTTCTGGTACACNCCAACAANTTCTAGTTCC----------TGCAGCAACGTCAT 499 consensus_12978#0 GGTATCTACTGGTACAAC--AACAAGTTTTAGCTACAGACAGGGGATGAAATTAAGATAT 1168 ** **** ******** ***** ** *** * * ** * * * * consensus_12978#1 G----CGGGC---GTATAGGAAGGGCTGACA--------GAATAAGCC--GTGTCGGTCT 1278 consensus_12978#2 G----CGGGC---GTATAGGAAGGGCTGACA--------GAATAAGCC--GTGTCGGTCT 542 consensus_12978#0 GATTATAAGTTTTATATACTTGGGTATGTCACTGCTTCTGAATAAATATGGTGCTGGTCT 1228 * * **** ** ** ** ****** *** ***** consensus_12978#1 TGCC-TCATCGCTTCATCTAAACCCATAATCTACTTGAAGTCTTGAATT-----AATTGT 1332 consensus_12978#2 TGCC-TCATCGCTTCATCTAAACCCATAATCTACTTGAAGTCTTGAATT-----AATTGT 596 consensus_12978#0 CACAATAATTAATTAAGGGGACCGGCCAACACATTTTAGCTTATCGGTCTCACAAATCGT 1288 * * ** ** * * * ** * ** * * * * *** ** consensus_12978#1 AAACTCAAATGATATTCTCAATAAAAAAGAAAAATGCCTCT--CTAAAAAAAATGCAATT 1390 consensus_12978#2 AAACTCAA-TGATATTCTCCACCCCCAAGAAAA-TGCCTCT--CTATAAAAAA------- 645 consensus_12978#0 GGACCTTAGTC-CATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAATAATCTGCCA 1347 ** * * **** * * *** ** * * * *** ** consensus_12978#1 CCTTAACTGTCTGTAATAGGGAGCGCCATAAATGCAGCTAAAAATTACAAGAATTACTCT 1450 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 CCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGAAAATCATGTT 1407 consensus_12978#1 ATTTATGCTTGGTTTCATTACGATACAAAA------------------------------ 1480 consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 TTGCATGAGACATGGTTTATACACAACATCCAATACATCATGTGAGATAAGTAGCATTAA 1467 consensus_12978#1 ------------------------------------------------------------ consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 ATTTAAGTATGGAATGGTGGTGTTTGCATTGTAAGAGTAGTGTCTAGTACTAGTTTCTTG 1527 consensus_12978#1 ------------------------------------------------------------ consensus_12978#2 ------------------------------------------------------------ consensus_12978#0 ATGATGAGGAGTTTATAAAAACTATGTCTATTGTCTTGGGTTGAGAAAAACATTACAGTA 1587 consensus_12978#1 ----------------------------- consensus_12978#2 ----------------------------- consensus_12978#0 TTCAAATCATAATCATTATTGTCCAAAAA 1616 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||