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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12978#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1616 fasta sequence
[GAGGGGAAGAAACAGGAGCTACTACTCCGCCGTTCCGGCAGCAGCGCAGCCATGCAGCGCTCACCGGTGGACAAACCGCCGTTCACGCTGGGGGACATAAAGAAGGCCATCCCGCCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCACGACCTTGCCATCGCCGCTGGCCTCCTCTACTTTGCTCTGGTCGGCATCCCTGCCCTCCCAAGCATCCTCCGCCTCGTCGCCTGGCCGCTCTACTGGGCCGCGCAGGGCAGTGTACTCACCGGCGTGTGGGTCATCGGGCACGAGTGTGGCCACCACGCCTTCTCGGACTACTTGCTCCTCGACAACCTCGTGGGCCTAGTGCTCCACTCGGCGCTTCTCACGCCCTTCTTCTCGTGGAAGTACAGCCACCGGCGGCACCACGCCAACACCGGCTCCATGGAGAAAGACGAGGTGTACGTCGCGAAGAAGAAGTCCGCGCTGCCGTGGTACACCCCGTACGTGTTCGGCAACCCCGTCGGGCGGCTGGTGTACATCGCCCTGCAGCTCACCCTCGCGTGGCCACTCTACCTCGCGTTCAACCTGTCCGGGCAGCCGTACCCACGCCTCGTCACCTGCCACTACGACCCCTACAGCCCGCTGTTCAGCGACCAGGAGCGCGTCCAAGTCCTCGTCTCCGACGCCGCCATCCTGGCCGTGCTGCTCGCGCTGCACAGGCTGACGGCGGCGTACGGGCTCTGGTGGGTGGTGCGCGTGTACGGCGTGCCGGTGATGATCGTGGGCGCGCTGTTCGTGCTCATCACGTACCTGCACCACACCCACCGGGCGCTCCCGCACTACGACTCCAGCGAGTGGGAGTGGCTGCGTGGCTCGCTCGCCACCGTCGACCGCGACTACGGCGTCCTCAACCGCGTGCTGCACAACGTCACGGACACGCACGTCCTCCACCACCTCTTCCCCAGCATGCCACACTACCACGCCATGGAGGCCACCAGGGCAGCGAGGCCCGTCCTCGGTGAGTACTACAAGTTTGACCGCACGCCCATCATCGAGGCAACATGGCGTGAGGCCAAGGAGTGCATGTACGTTGAGCCCAGGGAGCGCGATG-GTATCTACTGGTACAACAACAAGTTTTAGCTACAGACA-GGGGATGAAATTAAGAT-ATGATTATAAGTTTTATATACTTGGGTATGTCA-CTGCTTCTGAATAAATATGGTGCTGGTCT-CACAATAATTAATTAAGGGGACCGGCCAACACA-TTTTAGCTTATCGGTCTCACA-AATCGTGGACCTTAGTCCATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAATAATCTGCCACCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGA-A-AATCATGTTTTGCATGAGACATGGTTTATACACAACATCCAATACATCATGTGAGATAAGTAGCATTAAATTTAAGTATGGAATGGTGGTGTTTGCATTGTAAGAGTAGTGTCTAGTACTAGTTTCTTGATGATGAGGAGTTTATAAAAACTATGTCTATTGTCTTGGGTTGAGAAAAACATTACAGTATTCAAATC-ATAATCATTATTGTCCAAAAA]
[+] EMBL AK105371 [GAGGGGAAGAAACAGGAGCTACTACTCCGCCGTTCCGGCAGCAGCGCAGCCATGCAGCGCTCACCGGTGGACAAACCGCCGTTCACGCTGGGGGACATAAAGAAGGCCATCCCGCCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCACGACCTTGCCATCGCCGCTGGCCTCCTCTACTTTGCTCTGGTCGGCATCCCTGCCCTCCCAAGCATCCTCCGCCTCGTCGCCTGGCCGCTCTACTGGGCCGCGCAGGGCAGTGTACTCACCGGCGTGTGGGTCATCGGGCACGAGTGTGGCCACCACGCCTTCTCGGACTACTTGCTCCTCGACAACCTCGTGGGCCTAGTGCTCCACTCGGCGCTTCTCACGCCCTTCTTCTCGTGGAAGTACAGCCACCGGCGGCACCACGCCAACACCGGCTCCATGGAGAAAGACGAGGTGTACGTCGCGAAGAAGAAGTCCGCGCTGCCGTGGTACACCCCGTACGTGTTCGGCAACCCCGTCGGGCGGCTGGTGTACATCGCCCTGCAGCTCACCCTCGCGTGGCCACTCTACCTCGCGTTCAACCTGTCCGGGCAGCCGTACCCACGCCTCGTCACCTGCCACTACGACCCCTACAGCCCGCTGTTCAGCGACCAGGAGCGCGTCCAAGTCCTCGTCTCCGACGCCGCCATCCTGGCCGTGCTGCTCGCGCTGCACAGGCTGACGGCGGCGTACGGGCTCTGGTGGGTGGTGCGCGTGTACGGCGTGCCGGTGATGATCGTGGGCGCGCTGTTCGTGCTCATCACGTACCTGCACCACACCCACCGGGCGCTCCCGCACTACGACTCCAGCGAGTGGGAGTGGCTGCGTGGCTCGCTCGCCACCGTCGACCGCGACTACGGCGTCCTCAACCGCGTGCTGCACAACGTCACGGACACGCACGTCCTCCACCACCTCTTCCCCAGCATGCCACACTACCACGCCATGGAGGCCACCAGGGCAGCGAGGCCCGTCCTCGGTGAGTACTACAAGTTTGACCGCACGCCCATCATCGAGGCAACATGGCGTGAGGCCAAGGAGTGCATGTACGTTGAGCCCAGGGAGCGCGATG GTATCTACTGGTACAACAACAAGTTTTAGCTACAGACA GGGGATGAGATTAAGAT ATGATTATAAGTTTTATATACTTGGGTATGTCA CTGCTTCTGAATAAATATGGTGCTGGTCT CACAATAATTAATTAAGGGG ]
[+] EMBL BI810602 [ gaGCCAAGGAGTGCATGTACGTTGAGCCCAGGGAGCGCGATG GTATCTACTGGTACAACAACAAGTTTTAGCTACAGACACGGGGATGAAATTAAGAT ATGATTATAAGTTTTATATACTTGGGTATGTCACCTGCTTCTGAATAAATATGGTGCTGGTCTCCACCATAATTAATTAAGGGGACC GCCAACACACTTTTAGCTTATCGGTCTCACACAATCGTGGACCTTAGTCCATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAATAATCTGCCACCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGA A AATCATGTTTTGCATGAGACATGGTTTATACAC ACATCC ATACATCATGTGAGATAAGTAGCATTAAATTTAAGTATGGAATGGTGGTGTTTGCCTTGTAAGAGTAGTGTCTAGTACTAGTTTCTTGATGATGAGGAGTTTATAAAAACTATGTCTATTGTCTTGGGTTGAGAAAAAaa ]
[+] EMBL BI810786 [ CGTTGACCCCAGGGAGCTCGATGTTTATCTACTGGTACAAC ACAAGTTTTAGCTACAGACACGGGGATGAAATTAAGAT ATGATTATAAGTTTTATATACTTGGTTATGTCA CTGCTTCTGAATAAATATGGTGCTGGTCT CACCATAATTAATTAAGGGGACCGGCC ACACA TTTTAGCTTATCGGTCTCAC AATCGTGGACCTTAGTCCATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAATAATCTGCCACCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGA A AATCATGTTTTGCATGAGACATGGTTTATACACAACATCCAATACATCATGTGAGATAAGTA CATTAAATTTAAGTATGGAATGGTGGTGTTT CTTTGTAAGAGTAGTGTCTAGTACTAGTTTCTTGATGATGAGGAGTTTATAAAAACTATGTCTATTGTCTTGGGTTGAGAAAAAgaa ]
[+] EMBL BM419625 [ ccgGCTACAGACA GGGGATGAAATTAAGAT ATGATTATAAGTTTTATATACTTGGGTATGTCA CTGCTTCTGAATAAATATGGTGCTGGTCT CACAATAATTAATTAAGGGGACCGGCCAACACA TTTTAGCTTATCGGTCTCACA AATCGTGGACCTTAGTCCATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAATAATCTGCCACCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGA A AATCATGTTTTGCATGAGACATGGTTTATACACAACATCCAATACATCATGTGAGATAAGTAGCATTAAATTTAAGTATGGAATGGTGGTGTTTGCATTGTAAGAGTAGTGTCTAGTACTAGTTTCTTGATGATGAGGAGTTTATAAAAACTATGTCTATTGTCTTGGGTTGAGAATGGCCTTACAGTATTCAAATC ATAATCATTATTGTCCAAAAA]
[+] EMBL BM419313 [ tccgGCTACAGACA GGGGATGAAATTAAGATGATGATTATAAGTTTTATATACTTGGGTATGTCA CTGCTTCTGAATAAATATGGTGCTGGTCT CAC ATAATTAATTAAGGGGACCGGCC ACACA TTTTAGCTTATCGGTCTCAC AATCGTGGACCTTAGTCCATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAANAATCTGCCACCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGATATAATCATGTTTTGCATGAGACATGGTTTATACACCACATCCCATACATCATGTGAGATAAGTAGCATTAAATTTAAGTATGGAATGGTGGTGTTTGCATTGTAAGAGTAGTGTCTAGTACTAGTTTCTTGATGATGAGGAGTTTATAAAAACTATGTCTANTGTCTTGGGTTGAG AATGCCTTACANNATTC AATCAATAATCATTATTGTCC ]
consensusID : consensus_12978#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1480 fasta sequence
[GTGTTGACTGATTGCTTCGTGTAATTGCGGTCAGCAGCAGTACGTATGGGTACCAGCAGCCGGCCGACGACGGTGAAGGAGGGGAAGAAACTAGAGGCGCCCCGCCGTGCCGGCAGCCATGCAGCCGTGAAGCGCTCTCCGGTGGACAAGCCGCCGTTCACGCTGGGCGACATCAGAAAGGCCATCCCACCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCACGACCTTGCCATTGCCGCGGGCCTCCTCTACTTTGCTCTGGTCGTCATCCCTGCCCTCCCAGGCGTCCTCCGCCTCGTCGCCTGGCCGTTCTACTGGGCCGCGCAGGGGTGCTTCCTGTTCGGGGTGTGGATCATCGCGCACGAGTGCGGGCACCACGCGTTCTCGGGCCACGCACTCCTCGACGACACCCTCGGCCTGGTCCTGCACTCATGGCTCCTAGCGCCATACTTCTCGTGGAAATACACCCACCAACGGCACCACTCCAACACCAGCTCACAGGAGCGCGACGAGGTGTTCGTCCCCAGGTTCAAGTCCGACCTGCCGTGGTACTCCCCATACGTGTACAAGTACAACAACCCCGTCGCTCGGCTGCTGCTCCTCGTCGTGCAGCTCACCGTCGGGTGGCCGATGTATTTGGTGTTCAACACCTGGGGTCGCCAGTACCCAAGGTTCGCCAGCCACTTCGATCCCTCTGGGCCCATCTACAAGGGGCGGGAGCGCGTCTTCATCGCCATCTCGGACATCGGCATGCTGGCCGTGTCGCTCGCGCTGTACAGGCTTGCGGAGGGTTACGGGTTTTGGTGGGTGGTGCGCGTCTACGGCGTGCCGCTGCTTGTCGTCAACGCGTGGCTTGTGGT-CGTCACGTACCTGCATCACACTCA-CCGGGCGATCCCACA-CTA-CGACTCCAGCGAGTGGGACTGGTTGCG-CGGGGCGCTCGCCA-CCGTGGACCGCGACTACGGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACGCACGTCCTGCACCACCTCT-TCCCTGCCATCCCGCACTACCACGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCG-TTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA-CAAGGGCATCTTCTGGTACAGCAACAAGTTCTAGTTCCTGCAGCAACGTC-AGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCT-ACTTGAAGTCTTGAATTAATTGT-AAACTCAAATGATATTCT-C-AATAAAAAAGAAAAATGCCTCTCTAAAAAAAATGCAATTCCTTAACTGTCTGTAATAGGGAGCGCCATAAATGCAGCTAAAAATTACAAGAATTACTCTATTTATGCTTGGTTTCATTACGATACAAAA]
[+] EMBL AK070559 [GTGTTGACTGATTGCTTCGTGTAATTGCGGTCAGCAGCAGTACGTATGGGTACCAGCAGCCGGCCGACGACGGTGAAGGAGGGGAAGAAACTAGAGGCGCCCCGCCGTGCCGGCAGCCATGCAGCCGTGAAGCGCTCTCCGGTGGACAAGCCGCCGTTCACGCTGGGCGACATCAGAAAGGCCATCCCACCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCACGACCTTGCCATTGCCGCGGGCCTCCTCTACTTTGCTCTGGTCGTCATCCCTGCCCTCCCAGGCGTCCTCCGCCTCGTCGCCTGGCCGTTCTACTGGGCCGCGCAGGGGTGCTTCCTGTTCGGGGTGTGGATCATCGCGCACGAGTGCGGGCACCACGCGTTCTCGGGCCACGCACTCCTCGACGACACCCTCGGCCTGGTCCTGCACTCATGGCTCCTAGCGCCATACTTCTCGTGGAAATACACCCACCAACGGCACCACTCCAACACCAGCTCACAGGAGCGCGACGAGGTGTTCGTCCCCAGGTTCAAGTCCGACCTGCCGTGGTACTCCCCATACGTGTACAAGTACAACAACCCCGTCGCTCGGCTGCTGCTCCTCGTCGTGCAGCTCACCGTCGGGTGGCCGATGTATTTGGTGTTCAACACCTGGGGTCGCCAGTACCCAAGGTTCGCCAGCCACTTCGATCCCTCTGGGCCCATCTACAAGGGGCGGGAGCGCGTCTTCATCGCCATCTCGGACATCGGCATGCTGGCCGTGTCGCTCGCGCTGTACAGGCTTGCGGAGGGTTACGGGTTTTGGTGGGTGGTGCGCGTCTACGGCGTGCCGCTGCTTGTCGTCAACGCGTGGCTTGTGGT CGTCACGTACCTGCATCACACTCA CCGGGCGATCCCACA CTA CGACTCCAGCGAGTGGGACTGGTTGCG CGGGGCGCTCGCCA CCGTGGACCGCGACTACAGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACACACGTCGTGCACCACCTGT TCCCTACCATCCCGCACTACCACGCTGTGGAGGCGACCAAGGCGATCCGCCCTATCCTCGGCGAGTACTACCAGTTCGATCCCACACCCATCG TCAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA CAAGGGCGTCTTCTGGTACAGCAACAAGTTCTAGTACCTGTAGCAGCGGCAAGCGGGCGTATAGGAAGGGCTGACAGAATTAGCCATGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCT ACTTGAAGTCTTGAATTAATTGT AAACTCAAA ]
[+] EMBL BM419327 [ tnTACGGCGTGCC CTGCTTGTCGTC ACGCGTGGCTTGTGGT CGTCACGTACCTGCATCACACTCA CCGGGCGATCCCACA CTA CGACTCCAGCGAGTGGGACTGGTTGCG CGGGGCGCTCGCCA CCGTGGACCGCGACTACGGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACGCACGTCCTGCACCACCTCT TCCCTGCCATCCCGCACTACCACGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCG TTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA CAAGGGCATCTTCTGGTACAGCAACAAGTTCTAGTTCCTGCAGCAACGTC AGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCT ACTTGAAGTCTTGAATTAATCGTNCAACTCAAATGATATTCT C AATAAAAA ]
[+] EMBL BM421364 [ gtcCAACGCGTGGCTTGTGGTGCGTCACGTACCTGCATCACACTCACCCGGGCGATCCCACACCTATCGACTCCAGCGAGTGGGACTGGTTGCGCCGGGGCGCTCGCCACCCGTGGACCGCGACTACGGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACGCACGTCCTGCACCACCTCT TCCCTGCCATCCCGCACTACCACGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCG TTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCACCAAGGGCATCTTCTGGTACAGCCACAAGTTCTAGTTCCTGCAGCAACGTC AGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCT ACTTGAAGTCTTGAATTAATTGT AAACTC AATGATATTCTCC AATAAAAAAGAAAAATGCCTCTCTAAAAAAAA ]
[+] EMBL BM421365 [ CGAGTGGGACT GTTGC CGGGGCGCTCGCCA CCGTGGACCGCGANTACGGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACGCACGTCCTGCACCACCTCTGTCCCTGCCATCCCGCACTACCACGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCGTTTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA CAAGGGCATCTTCTGGTACAGCAACAAGTTCTAGTTCCTGCAGCAACGTC AGCGGGCGTATAGGAAGGGCTGACAGAATAA CCGT TC GTCTT CCTCATCGCTTCATCTAAACCCATAATCT ACTTGAAGTCTTGAATTAATTGT AAACTCAAATGATATTCT CAAATAAAAAAGAAAAATCCCTCTCTAAAAAA ]
[+] EMBL BI810284 [ ccgGGCTTCCTTAACCGAGTGTTTCACAACATCACGGACACGCACGTCCTGCACCACCTCT TCCCTGCCATCCCGCACTACCACGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCG TTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA CAAGGGCATCTTCTGGTACAGC ACAAGTTCTAGTTCCTGCAGCAACGTC AGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCT ACTTGAAGTCTTGAATTAATTGT AAACTCAAATGATATTCT C AATAAAAAAGAAAAATGCCTCTCTATAAAAA ]
[+] EMBL BM038879 [ CACGGACACGCACGTCCTGCACCACCTCT TCCCTGCCATCCCGCACTACCAC CGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCG TTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCA CAAGGGCATCTTCTGGTACAGC ACAAGTTCTAGTTCCTGCAGCAACGTC AGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCTGACTTGAAGTCTTGAATTAATTGT AAACTCAAATGATATTCT C AATAAAAAAGAAAAATGCCTCTCTATATATCTTGCAATTCCTTAACTGTCTGTAATAGGGAGCGCCATAAATGCAGCTAAAAATTACAAGAATTACTCTATTTATGCTTGGTTTCATTACGATACAAAA]
consensusID : consensus_12978#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence
[CGGACATCGGCCATNTGCCGGTGTCGCTCGGCCCTGTACTGGTCTTTCCGGATGGGTTNCGGGNGTTTTTGGTNNNGNTTGGGTNGCGCTGTCTACGCCGTGCCGCCTGCTTTGTCGTCACGCGTGGCTTGTGGTTCGTCACGTACCTGCATCACACTCACCGGCGATCCCACACTACGACTCCAGCGAGTGGGACTGGTTGCGCGGGGCGCTCGCCACCGTGGATCCGCGACTACGGCTTCCTTAACCGAGTGTGTTCACAACATCACGGACACGCACTGTCCTGCACCACCTCTTCCCTGCCATCCCGCACTACCANCGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCGTTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCACAAGGGCATCTTCTGGTACACNCCAACAANTTCTAGTTCCTGCAGCAACGTCATGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCTACTTGAAGTCTTGAATTAATTGTAAACTCAATGATATTCTCCACCCCCAAGAAAATGCCTCTCTATAAAAAA]
[+] EMBL BM038190 [CGGACATCGGCCATNTGCCGGTGTCGCTCGGCCCTGTACTGGTCTTTCCGGATGGGTTNCGGGNGTTTTTGGTNNNGNTTGGGTNGCGCTGTCTACGCCGTGCCGCCTGCTTTGTCGTCACGCGTGGCTTGTGGTTCGTCACGTACCTGCATCACACTCACCGGCGATCCCACACTACGACTCCAGCGAGTGGGACTGGTTGCGCGGGGCGCTCGCCACCGTGGATCCGCGACTACGGCTTCCTTAACCGAGTGTGTTCACAACATCACGGACACGCACTGTCCTGCACCACCTCTTCCCTGCCATCCCGCACTACCANCGCGGTGGAGGCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTCGTTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCACAAGGGCATCTTCTGGTACACNCCAACAANTTCTAGTTCCTGCAGCAACGTCATGCGGGCGTATAGGAAGGGCTGACAGAATAAGCCGTGTCGGTCTTGCCTCATCGCTTCATCTAAACCCATAATCTACTTGAAGTCTTGAATTAATTGTAAACTCAATGATATTCTCCACCCCCAAGAAAATGCCTCTCTATAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12978#1 GTGTTGACTGATTGCTTCGTGTAATTGCGGTCAGCAGCAGTACGTATGGGTACCAGCAGC 60
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 ------------------------------------------------------------
consensus_12978#1 CGGCCGACGACGGTGAAGGAGGGGAAGAAACTAGAGGCGCCCCGCCGTGCCGGCAGCCAT 120
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 ---------------GAGGGGAAGAAACAGGAGCTACTACTCCGCCGTTCCGGCAGCAGC 45
consensus_12978#1 GCAGCCGTGAAGCGCTCTCCGGTGGACAAGCCGCCGTTCACGCTGGGCGACATCAGAAAG 180
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 GCAGCCATGCAGCGCTCACCGGTGGACAAACCGCCGTTCACGCTGGGGGACATAAAGAAG 105
consensus_12978#1 GCCATCCCACCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCAC 240
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 GCCATCCCGCCGCACTGCTTCCACCGCTCCGTGATCAAGTCATTCTCCTACCTGCTCCAC 165
consensus_12978#1 GACCTTGCCATTGCCGCGGGCCTCCTCTACTTTGCTCTGGTCGTCATCCCTGCCCTCCCA 300
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 GACCTTGCCATCGCCGCTGGCCTCCTCTACTTTGCTCTGGTCGGCATCCCTGCCCTCCCA 225
consensus_12978#1 GGCGTCCTCCGCCTCGTCGCCTGGCCGTTCTACTGGGCCGCGCAGGGGTGCTTCCTGTTC 360
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 AGCATCCTCCGCCTCGTCGCCTGGCCGCTCTACTGGGCCGCGCAGGGCAGTGTACTCACC 285
consensus_12978#1 GGGGTGTGGATCATCGCGCACGAGTGCGGGCACCACGCGTTCTCGGGCCACGCACTCCTC 420
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 GGCGTGTGGGTCATCGGGCACGAGTGTGGCCACCACGCCTTCTCGGACTACTTGCTCCTC 345
consensus_12978#1 GACGACACCCTCGGCCTGGTCCTGCACTCATGGCTCCTAGCGCCATACTTCTCGTGGAAA 480
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 GACAACCTCGTGGGCCTAGTGCTCCACTCGGCGCTTCTCACGCCCTTCTTCTCGTGGAAG 405
consensus_12978#1 TACACCCACCAACGGCACCACTCCAACACCAGCTCACAGGAGCGCGACGAGGTGTTCGTC 540
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 TACAGCCACCGGCGGCACCACGCCAACACCGGCTCCATGGAGAAAGACGAGGTGTACGTC 465
consensus_12978#1 CCCAGGTTCAAGTCCGACCTGCCGTGGTACTCCCCATACGTGTACAAGTACAACAACCCC 600
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 GCGAAGAAGAAGTCCGCGCTGCCGTGGTACACCCCGTACGTGTTCGG------CAACCCC 519
consensus_12978#1 GTCGCTCGGCTGCTGCTCCTCGTCGTGCAGCTCACCGTCGGGTGGCCGATGTATTTGGTG 660
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 GTCGGGCGGCTGGTGTACATCGCCCTGCAGCTCACCCTCGCGTGGCCACTCTACCTCGCG 579
consensus_12978#1 TTCAACACCTGGGGTCGCCAGTACCCAAGGTTCGCCA---GCCACTTCGATCCCTCTGGG 717
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 TTCAACCTGTCCGGGCAGCCGTACCCACGCCTCGTCACCTGCCACTACGACCCCTACAGC 639
consensus_12978#1 CCCATCTACAAGGGGCGGGAGCGCGTCTTCATCG-CCATCT-CGGACATCGGCATGCTGG 775
consensus_12978#2 -------------------------CGGACATCGGCCATNTGCCGGTGTCGCTCGGCC-- 33
consensus_12978#0 CCGCTGTTCAGCGACCAGGAGCGCGTCCAAGTCC-TCGTCT-CCGACGCCGCCATCCTGG 697
** * * * * * ** *
consensus_12978#1 CCGTGTCGCTCGCGCTGTACAGGCTTGCGGAGGGTTACGGGTTTTGGTGGGTGGTGCGCG 835
consensus_12978#2 CTGTACTGGTCTTTCCGGATGGG-TTNCGGGNGTTTTTGGTNNNGNTTGGGTNGCGC-TG 91
consensus_12978#0 CCGTGCTGCTCGCGCTGCACAGGCTGACGGCGGCGTACGGGCTCTGGTGGGTGGTGCGCG 757
* ** * ** * * * ** * *** * * ** ***** * ** *
consensus_12978#1 TCTACGGCGTGCCGC-TGCTT-GTCGTCAACGCGTGGCTTGTGGT-CGTCACGTACCTGC 892
consensus_12978#2 TCTACGCCGTGCCGCCTGCTTTGTCGTCA-CGCGTGGCTTGTGGTTCGTCACGTACCTGC 150
consensus_12978#0 TGTACGGCGTGCCGG-TGATG-ATCGTGGGCGCGCTGTTCGTGCT-CATCACGTACCTGC 814
* **** ******* ** * **** **** * * *** * * ************
consensus_12978#1 ATCACACTCACCGGGCGATCCCACACTACGACTCCAGCGAGTGGGACTGGTTGCGCGGGG 952
consensus_12978#2 ATCACACTCACCGG-CGATCCCACACTACGACTCCAGCGAGTGGGACTGGTTGCGCGGGG 209
consensus_12978#0 ACCACACCCACCGGGCGCTCCCGCACTACGACTCCAGCGAGTGGGAGTGGCTGCGTGGCT 874
* ***** ****** ** **** *********************** *** **** **
consensus_12978#1 CGCTCGCCACCGTGGA-CCGCGACTACGGCTTCCTTAACCGAGTGT-TTCACAACATCAC 1010
consensus_12978#2 CGCTCGCCACCGTGGATCCGCGACTACGGCTTCCTTAACCGAGTGTGTTCACAACATCAC 269
consensus_12978#0 CGCTCGCCACCGTCGA-CCGCGACTACGGCGTCCTCAACCGCGTGC-TGCACAACGTCAC 932
************* ** ************* **** ***** *** * ****** ****
consensus_12978#1 GGACACGCAC-GTCCTGCACCACCTCTTCCCTGCCATCCCGCACTACCAC-GCGGTGGAG 1068
consensus_12978#2 GGACACGCACTGTCCTGCACCACCTCTTCCCTGCCATCCCGCACTACCANCGCGGTGGAG 329
consensus_12978#0 GGACACGCAC-GTCCTCCACCACCTCTTCCCCAGCATGCCACACTACCAC-GCCATGGAG 990
********** ***** ************** *** ** ******** ** *****
consensus_12978#1 GCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTC 1128
consensus_12978#2 GCGACCAAGGCGATCCGCCCCGTCCTTGGCGAGTACTACCAGTTCGATCCCACACCCGTC 389
consensus_12978#0 GCCACCAGGGCAGCGAGGCCCGTCCTCGGTGAGTACTACAAGTTTGACCGCACGCCCATC 1050
** **** *** * ******** ** ********* **** ** * *** *** **
consensus_12978#1 GTTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCACAAG 1188
consensus_12978#2 GTTAAGGCGATATGGCGCGAGGCTAAGGAGTGCATCTACATCCAGTCCGAGGACCACAAG 449
consensus_12978#0 ATCGAGGCAACATGGCGTGAGGCCAAGGAGTGCATGTACGTTGAGCCCAGGGAGCGCGAT 1110
* **** * ****** ***** *********** *** * ** ** *** * * *
consensus_12978#1 GGCATCTTCTGGTACAGC--AACAAGTTCTAGTTCC----------TGCAGCAACGTCA- 1235
consensus_12978#2 GGCATCTTCTGGTACACNCCAACAANTTCTAGTTCC----------TGCAGCAACGTCAT 499
consensus_12978#0 GGTATCTACTGGTACAAC--AACAAGTTTTAGCTACAGACAGGGGATGAAATTAAGATAT 1168
** **** ******** ***** ** *** * * ** * * * *
consensus_12978#1 G----CGGGC---GTATAGGAAGGGCTGACA--------GAATAAGCC--GTGTCGGTCT 1278
consensus_12978#2 G----CGGGC---GTATAGGAAGGGCTGACA--------GAATAAGCC--GTGTCGGTCT 542
consensus_12978#0 GATTATAAGTTTTATATACTTGGGTATGTCACTGCTTCTGAATAAATATGGTGCTGGTCT 1228
* * **** ** ** ** ****** *** *****
consensus_12978#1 TGCC-TCATCGCTTCATCTAAACCCATAATCTACTTGAAGTCTTGAATT-----AATTGT 1332
consensus_12978#2 TGCC-TCATCGCTTCATCTAAACCCATAATCTACTTGAAGTCTTGAATT-----AATTGT 596
consensus_12978#0 CACAATAATTAATTAAGGGGACCGGCCAACACATTTTAGCTTATCGGTCTCACAAATCGT 1288
* * ** ** * * * ** * ** * * * * *** **
consensus_12978#1 AAACTCAAATGATATTCTCAATAAAAAAGAAAAATGCCTCT--CTAAAAAAAATGCAATT 1390
consensus_12978#2 AAACTCAA-TGATATTCTCCACCCCCAAGAAAA-TGCCTCT--CTATAAAAAA------- 645
consensus_12978#0 GGACCTTAGTC-CATTCCCAACCTAATGGAATGGTGTCCATAGCATTAAATAATCTGCCA 1347
** * * **** * * *** ** * * * *** **
consensus_12978#1 CCTTAACTGTCTGTAATAGGGAGCGCCATAAATGCAGCTAAAAATTACAAGAATTACTCT 1450
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 CCTAGGATAAAAAAATGATGTGACAAGTGAATAAATGAAGAAAGATAAGAAAATCATGTT 1407
consensus_12978#1 ATTTATGCTTGGTTTCATTACGATACAAAA------------------------------ 1480
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 TTGCATGAGACATGGTTTATACACAACATCCAATACATCATGTGAGATAAGTAGCATTAA 1467
consensus_12978#1 ------------------------------------------------------------
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 ATTTAAGTATGGAATGGTGGTGTTTGCATTGTAAGAGTAGTGTCTAGTACTAGTTTCTTG 1527
consensus_12978#1 ------------------------------------------------------------
consensus_12978#2 ------------------------------------------------------------
consensus_12978#0 ATGATGAGGAGTTTATAAAAACTATGTCTATTGTCTTGGGTTGAGAAAAACATTACAGTA 1587
consensus_12978#1 -----------------------------
consensus_12978#2 -----------------------------
consensus_12978#0 TTCAAATCATAATCATTATTGTCCAAAAA 1616
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||