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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12985#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 928 fasta sequence
[GGTCAGTCACAACTAAAACA-GAAACCAGTTAGCTGCAGACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACCAAAGGGAGCTCAAGACAATTACTCAGTGGTGGGA-GGATCTTT-C-AATGACATAGGACTAGACTACATAAGGGATCGCATTGTTGAATGCTACTTTTGGTCATATTCTATGTACTTTGAGGAGGAGTACACACGTGCCCGGATGATCCCTTGCCAGTTTTTC]
[+] EMBL CB617712 [GGTCAGTCACAACTAAAACA GAAACCAGTTAGCTGCAGACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGTAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATT ]
[+] EMBL CB622382 [GGTCAGTCACAACCATAACA GAAACCAGTTAGCTGCAGACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGTAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACCAAAGGGAGCTCAAGACAATTACTCAGTGGTGGGAGGGATCTT ]
[+] EMBL CB625000 [ TCACCACTAAAACA GAAACCAGTTAGCTGCAGACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACCAAAGGGAGCTCAAGA ]
[+] EMBL CB621393 [ CACACCTAAAACA GAAACCAGTTAGCTGCAGACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACCANAGGGAGCTCAAGACAATTACTC ]
[+] EMBL CB621355 [ CACAACTAAAACA GAAACCAGTTAGCTGCAGACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACA ]
[+] EMBL CB618120 [ AAAACA GAAACCAGTTAGCTGCAGACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACCAAAGGGAGCTCAAGACAATTACTCAGTGGTGGGA GGATCTTT C AATGACATAGGACTAGACTACATAAAGGATCGCATTGTTGA ]
[+] EMBL CB624300 [ AAAACC TAAACCAGTTAGCTGCAAACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCATAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCTACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACCAGAG ]
[+] EMBL CB620913 [ AACACCAAACCAGTTAGCTGCAGACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACCAAAGGGAGCTCAAGACAATTACTCAGTGGTGGGA GGATCTTT ]
[+] EMBL CB624239 [ AACA GAAACCAGTTAGCTGCAGACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACNCAAGGGAGCTCAAGACAATTACTCAGTGGTGGGA GGATCTTT C AAat ]
[+] EMBL CB625860 [ AAACCAGTTTTAAGCAGACAAACCACACACACAAATTCATGGCCTCTTCAAGTTGTACAGCTCCCAAGGCAGCACCTGAGTTTCACCCCACAGTTTGGGGTGACTTCTTTATCAACTATGAACCACAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACCAAAGGGAGCTCAAGACAATTACTCAGTGGTGGGA GGATCTTTCC AATGACATAGGAC ]
[+] EMBL CB621143 [ ACCACCTTCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACCAAAGGGAGCTCAAGACAATTACTCAGTGGTGGGA GGATCTTT CAAATGACATAGGACTAGACTACATAAGGGATCGCATTGTTGAATGCTACTTTTGGTCATATTCTATGTACTTTGAGGAGGAGTACACACGTGCCCGGATGATCCCTTGCCAGTTTTTC]
[+] EMBL CB621179 [ ACCCCAACCCTTGCAGCGGCCAGAGAAATGGATGAGAGAGAGATCCGATCAGTTAAGAAAGGACGTAAGTCAGCTGTTCGACGCTTTCGATGGTGTGGCAGAAAAAATGAATCTAGTTGACACGCTCCAACGCCTGGGGATAGATCATCTCTTTGAGGAAGAGATAGCCACCACCTTGAATACCATTCATGGTGCTGAATTTGACAGCCCTAGCCTTCATGACGTTGCCCTCCGGTTTCGCTTGCTGAGGCAGCAAGGGTTATGGGTTTCATCAGATGTTTTCAACAAGTTCAAACACAGAGATGGAAGCTTTATCATTGACATAACAAATGACCCAAAAGGTCTCTTAAGCTTATACAATGCTGCCAACCTTCTCACCCACAACGAGGAAGCCCTCCAGGAAGCTATCTTATTTTCAAGGCATCATTTGGAGTTAATGAAAAGTAACCTGAAGTCCCCATTAGCTGAGCAAGTTTCACGTGCTCTTCAGATACCATTGTCCAGAAACTTGAAGAGGGTTGAGGCCCTATCTTATATATTAGAGTACAATGTACACGAGCAAACATACAACCCCTCAATACTGGAGCTTGCCAAGCTAGACTTTAACCTTCTTCAACATATTCACCAAAGGGAGCTCAAGACAATTACTCAGTGGTGGGA GGATCTTT CAAATGACATAGGACTAGACTACATAAGGGATCGCATTGTTGAATGCTACTTTTGGTCATATTCTATGTACTTTGAGGAGGAGTACACACGTGCCCGGATGAT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||