cluster # 13009

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Oryza sativa
cluster # 13009 cluster # 13009 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13009#0 length = 1719 sequences # 10

consensus_13009#1 length = 622 sequences # 1
consensus_13009#2 length = 523 sequences # 1

consensusID : consensus_13009#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1719
fasta sequence

                              [ATTTTCCCCAAGCTCCCGAAGCGATTTCCATTTCAACTGCTCTTCCTCCCTTCGCAGCACGCACGTCGCCGTAGCCACATGGCCGACCCTTCCAGATCCTCCCCCACCGCGGCCGCCGCCGGCGACGCCCTCCTGGCGGCGGCGGCGGCGCCCGGTGACGCGCCGGACGCGACCGCCCTCGCCGTGGCGGCCGATGCGGACGCGGAGTTCGGGTTCCAGCGCGCGGAGCTCGGGACGGAGAAGCTGGCCGGCACGGTGCAGTTCCACGAGCGCCACGTCTTCCTCTGCTACAAGGGGCCCGAGGTGTGGCCGTCCCACGTCGAGGCCGCGGAGTCTGACCGCCTCCCCCGCCTCCTCGCCGCCGCCATCAAGACCCACAAGTCGGACTTGAAGAAGAAAACCAAATTGACCATTTGTGAAGGAGAAGATGGCACTGAGTCATCCAATGGAGACGTGTTGATCTTTCCAGATATGATCAGATACAGAGGGCTGACCCACTTTGATGTTGACAACTTTGTTCAAGAAGTGCTTGTGAAAGATACTGAATGGCTTCCTGGATCTCCTGAGGCTATAAAAGGTTCCTATGTTTTTGTTTGCTGCCATGCAAGCAGGGATAAGAGGTGTGGTGTCTGTGGACCTGCTTTGATTAAGAGGTTCAAGGAAGAGATAGGTGTACAAGGCCTTGCTGATCAGGTGTCAGTCAGTGCATGCTCACATGTGGGAGGCCATAAGTATGCAGGAAATGTCATTGTTTTCAGTGCAGATGCCAAGGGAGAAGTGACTGGTCATTGGTAT-GGTTATGTTTCTCCTGATGATGTGCCTGTCTTGCTACAT-AAACATATTGGACAAGGAGAGATCGTGGACCATCTATGGAGGGGTCAGAT-GGGTTTGTCTGAAGAAGAGCAGAGGAAAGCCCTGGAGTCTAAACACGTGACAAATGGTGTGACCGAGGATGGTGCCCATGAATCCCCTGAAGAAACTACCAACGGTTCTGCTTGCAACCCTGTCGCTGCAGGTGGTTGCTGCCAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGATCTGCCAAAGGAGGATAAGAGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAAGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATCTACAAG-AACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAAGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCCTTGCCTATTTGTTTACCTTCGCAAGGCAGTGACCCTGCTGTTCGACATGACGATGTTATCTTTATTTTGAACTGGAGGTGTTCTTCAGCATGTGGATGCATGCTATTCAGAAAATGGTCAGCTTGTATTTTTGTCGCTGGTTGCTGCTCCTGTTGTTGAATGTTTTGAGCACTCCATTTATATGGTAATAAATATTTCATTTTCAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK104276             [ATTTTCCCCAAGCTCCCGAAGCGATTTCCATTTCAACTGCTCTTCCTCCCTTCGCAGCACGCACGTCGCCGTAGCCACATGGCCGACCCTTCCAGATCCTCCCCCACCGCGGCCGCCGCCGGCGACGCCCTCCTGGCGGCGGCGGCGGCGCCCGGTGACGCGCCGGACGCGACCGCCCTCGCCGTGGCGGCCGATGCGGACGCGGAGTTCGGGTTCCAGCGCGCGGAGCTCGGGACGGAGAAGCTGGCCGGCACGGTGCAGTTCCACGAGCGCCACGTCTTCCTCTGCTACAAGGGGCCCGAGGTGTGGCCGTCCCACGTCGAGGCCGCGGAGTCTGACCGCCTCCCCCGCCTCCTCGCCGCCGCCATCAAGACCCACAAGTCGGACTTGAAGAAGAAAACCAAATTGACCATTTGTGAAGGAGAAGATGGCACTGAGTCATCCAATGGAGACGTGTTGATCTTTCCAGATATGATCAGATACAGAGGGCTGACCCACTTTGATGTTGACAACTTTGTTCAAGAAGTGCTTGTGAAAGATACTGAATGGCTTCCTGGATCTCCTGAGGCTATAAAAGGTTCCTATGTTTTTGTTTGCTGCCATGCAAGCAGGGATAAGAGGTGTGGTGTCTGTGGACCTGCTTTGATTAAGAGGTTCAAGGAAGAGATAGGTGTACAAGGCCTTGCTGATCAGGTGTCAGTCAGTGCATGCTCACATGTGGGAGGCCATAAGTATGCAGGAAATGTCATTGTTTTCAGTGCAGATGCCAAGGGAGAAGTGACTGGTCATTGGTAT GGTTATGTTTCTCCTGATGATGTGCCTGTCTTGCTACAT AAACATATTGGACAAGGAGAGATCGTGGACCATCTATGGAGGGGTCAGAT GGGTTTGTCTGAAGAAGAGCAGAGGAAAGCCCTGGAGTCTAAACACGTGACAAATGGTGTGACCGAGGATGGTGCCCATGAATCCCCTGAAGAAACTACCAACGGTTCTGCTTGCAACCCTGTCGCTGCAGGTGGTTGCTGCCAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGATCTGCCAAAGGAGGATAAGAGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAAGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATCTACAAG AACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAAGAAAGTGACCAAAGT                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK071759             [ TTTTCCCCAAGCTCCCGAAGCGATTTCCATTTCAACTGCTCTTCCTCCCTTCGCAGCACGCACGTCGCCGTAGCCACATGGCCGACCCTTCCAGATCCTCCCCCACCGCGGCCGCCGCCGGCGACGCCCTCCTGGCGGCGGCGGCGGCGCCCGGTGACGCGCCGGACGCGACCGCCCTCGCCGTGGCGGCCGATGCGGACGCGGAGTTCGGGTTCCAGCGCGCGGAGCTCGGGACGGAGAAGCTGGCCGGCACGGTGCAGTTCCACGAGCGCCACGTCTTCCTCTGCTACAAGGGGCCCGAGGTGTGGCCGTCCCACGTCGAGGCCGCGGAGTCTGACCGCATCCCCCGCCTCCTCGCCGCCGCCATCAAGACCCACAAGTCGGACTTGAAGAAGAAAACCAAATTGACCATTTGTGAAGGAGAAGATGGCACTGAGTCATCCAATGGAGACGTGTTGATCTTTCCAGATATGATCAGATACAGAGGGCTGACCCACTTTGATGTTGACAACTTTGTTCAAGAAGTGCTTGTGAAAGATACTGAATGGCTTCCTGGATCTCCTGAGGCTATAAAAGGTTCCTATGTTTTTGTTTGCTGCCATGCAAGCAGGGATAAGAGGTGTGGTGTCTGTGGACCTGCTTTGATTAAGAGGTTCAAGGAAGAGATAGGTGTACAAGGCCTTGCTGATCAGGTGTCAGTCAGTGCATGCTCACATGTGGGAGGCCATAAGTATGCAGGAAATGTCATTGTTTTCAGTGCAGATGCCAAGGGAGAAGTGACTGGTCATTGGTAT GGTTATGTTTCTCCTGATGATGTGCCTGTCTTGCTACAT AAACATATTGGACAAGGAGAGATCGTGGACCATCTATGGAGGGGTCAGAT GGGTTTGTCTGAAGAAGAGCAGAGGAAAGCCCTGGAGTCTAAACACGTGACAAATGGTGTGACCGAGGATGGTGCCCATGAATCCCCTGAAGAAACTACCAACGGTTCTGCTTGCAACCCTGTCGCTGCAGGTGGTTGCTGCCAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGATCTGCCAAAGGAGGATAAGAGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAAGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATCTACAAG AACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAAGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCCTTGCCTATTTGTTTACCTTCGCAAGGCAGTGACCCTGCTGTTCGACATGACGATGTTATCTTTATTTTGAACTGGAGGTGTTCTTCAGCATGTGGATG                                                                                                                              ]
[+] EMBL CA755796             [                        TTTCCATTTCAACTGCTCTTCCTCCCTTCGCAGCACGCACGTCGCCGTAGCCACATGGCCGACCCTTCCAGATCCTCCCCCACCGCGGCCGCCGCCGGCGACGCCCTCCTGGCGGCGGCGGCGGCGCCCGGTGACGCGCCGGACGCGACCGCCCTCGCCGTGGCGGCCGATGCGGACGCGGAGTTCGGGTTCCAGCGCGCGGAGCTCGGGACGGAGAAGCTGGCCGGCACGGTGCAGTTCCACGAGCGCCACGTCTTCCTCTGCTACAAGGGGCCCGAGGTGTGGCCGTCCCACGTCGAGGCCGCGGAGTCTGACCGCCTCCCCCGCCTCCTCGCCGCCGCCATCAAGACCCACAAGTCGGACTTGAAGAAGAAAACCAAATTGACCATTTGTGAAGGAGAAGATGGCACTGAGTCATCCAATGGAGACGTGTTGATCTTTCCAGATATGATCAGATACAGAGGGCTGACCCACTTTGATGTTGACAACTTTGTTCAAGAAGTGCTTGTGAAAGATACTGAATGGCTTCCTGGATCTCCTGAGGCTATAAAAGGTTCCTATGTTTTTGTTTGCTGCCATGCAAGCAGGGATAAGAGGTGTGGTGTCTGTGGACCTGCTTTGATTAAGAGGTNCAAGGAAGAGATAGGTGTACAAGGCCTTGCTGATCAGGTGTCAGTCAGTGCATGCTCACATGTGGGAGGCCATAAGTATGCAAGAAATGTCATNGTNTTCAGTGCAGATGCCAAGGGAGAAGTGACTGGTCATNGGTATGGGTNATGTTCCTCCTGATGATGTGCCTGTCTGGCTACATAAAACATATTGGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF322609             [                                                                                                                                                                                                                                                                                                                                         GGAGTCTGACCGCCTCCCCCGCCTCCTCGCCGCCGCCATCAAGACCCACAAGTCGGACTTGAAGAAGAAAACCAAATTGACCATTTGTGAAGGAGAAGATGGCACTGAGTCATCCAATGGAGACGTGTTGATCTTTCCAGATATGATCAGATACAGAGGGCTGACCCACTTTGATGTTGACAACTTTGTTCAAGAAGTGCTTGTGAAAGATACTGAATGGCTTCCTGGATCTCCTGAGGCTATAAAAGGTTCCTATGTTTTTGTTTGCTGCCATGCAAGCAGGGATAAGAGGTGTGGTGTCTGTGGACCTGCTTTGATTAAGAGGTTCAAGGAAGAGATAGGTGTACAAGGCCTTGCTGATCAGGTGTCAGTCAGTGCATGCTCACATGTGGGAGGCCATAAGTATGCAGGAAATGTCATTGTTTTCAGTGCAGATGTCAAGGGAGAAGTGACTGGTCATTGGTAT GGTTATGTTTCTCCTGATGATGTGCCTGTCTTGCTACAT AAACATATTGGACAAGGAGAGATCGTGGACCATCTATGGAGGGGTCAGATGGGGTTTGTCTGAAGAAGAGCAGAGGAAAGCCCTGGAGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB653835             [                                                                                                                                                                                                                                                                                                                                                                                                                        ACCATTTGTGAAGGAGAAGATGGCACTGAGTCATCCAATGGAAACGTGTTGATCTTTCCACATATGATCAGATACAGAGGGCTGACCCACTTTGATGTTGACAACTTTGTTCAAGAAGTGCTTGTGAAAGATACTGAATGGCTTCCTGGATCTCCTGAAGCTATAAAAGGTTCCTATGTTTTTGTTTGCTGCCATGCCAGCACGGATAAGAGGTGTGGTGTCTGTGGACCTGCTTTGATTAAGAGGTTCAAGGAAGAGATAGGTGTACAAGGCCTTGCTGATCAAGTGTCATTCGGTGCATGCTCACATGTGGGAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA999232             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GACAAATGGTGTGACCGAGGATGGTGCCCATGAATCCCCTGAAGAAACTACCAACGGTTCTGCTTGCAACCCTGTCGCTGCAGGTGGTTGCTGCCAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGATCTGCCAAAGGAGGATAAGAGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAAGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATCTACAAG AACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAAGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACT                                                                                                                                                                                                                                                            ]
[+] EMBL CA998126             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GACAAATGGTGTGACCGAGGATGGTGCCCATGAATCCCCTGAAGAAACTACCAACGGTTCTGCTTGCAACCCTGTCGCTGCAGGTGGTTGCTGCCAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGATCTGCCAAAGGAGGATAAGAGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAAGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATCTACAAGAAACCTC ATTGAGAATCCTCAGAACAGGGCTAGGTTTTGTGCACTAANGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAAGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAA                                                                                                                                                                                                                                             ]
[+] EMBL CA766475             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATCTACAAG AACCTCAATTGAGAATCCTCAGAACAGGGCTCGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAAGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCCTTGCCTATTTGTTTACCTTCGCAAGGCAGTGACCCTGCTGTTCGACATGACGATGTTATCTTTATTTTGAACTGGAAGTGTTCTTCAGCATGTGGATGCATGCTATTCAGAAAATGGTCAGCTTGTATTTTTGTCGCTGGTTGCTGCTCCTGTTGTTGAATGTTTTGAGCACTCCATTTATATGGTAATAAATATTTC                          ]
[+] EMBL AU088615             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cCCNCAATTGAGAACCCNCAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGCCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAAGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCCTTGCCTATTTGTTTACCTTCGCAAGGCAGTGACCCTGCTGTTCGACATGACGATGTTATCTTTATTTTGAACTGGAGGTGTTCTTCAGCATGTGGATGCATGCTATTCAGAAAATGGTCAGCTTGTATTTTTGTCGCTGGTTGCTGCTCCTGTTGTTGAATGTTTTGAGCACTCCATTTATATGGTAATAAATATTTCATTTTCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C97779               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAAACNCTGCTTTAACCCCAANGTTTCCCACGCCTTGCCTAATTGTTTACCNTCGCAAGGCAGTGACCCTGCTGTTCGACATGACGATGTTANCTTTATTTTGAACTGGAGGTGTTCTTCAGCATGTGGATGCATGCTATTCNGAAAATGGTCNGCTTGTATTTTTGTCGCTGGTTGCTGCTCCTGTTGTTGAATGTTTTGAGNACNCCNTTTNTATGGTNATAAATATTTCATTTTCAAAAAAAAAAAAAAAAAAAA]




>consensus_13009#0
ATTTTCCCCAAGCTCCCGAAGCGATTTCCATTTCAACTGCTCTTCCTCCCTTCGCAGCAC
GCACGTCGCCGTAGCCACATGGCCGACCCTTCCAGATCCTCCCCCACCGCGGCCGCCGCC
GGCGACGCCCTCCTGGCGGCGGCGGCGGCGCCCGGTGACGCGCCGGACGCGACCGCCCTC
GCCGTGGCGGCCGATGCGGACGCGGAGTTCGGGTTCCAGCGCGCGGAGCTCGGGACGGAG
AAGCTGGCCGGCACGGTGCAGTTCCACGAGCGCCACGTCTTCCTCTGCTACAAGGGGCCC
GAGGTGTGGCCGTCCCACGTCGAGGCCGCGGAGTCTGACCGCCTCCCCCGCCTCCTCGCC
GCCGCCATCAAGACCCACAAGTCGGACTTGAAGAAGAAAACCAAATTGACCATTTGTGAA
GGAGAAGATGGCACTGAGTCATCCAATGGAGACGTGTTGATCTTTCCAGATATGATCAGA
TACAGAGGGCTGACCCACTTTGATGTTGACAACTTTGTTCAAGAAGTGCTTGTGAAAGAT
ACTGAATGGCTTCCTGGATCTCCTGAGGCTATAAAAGGTTCCTATGTTTTTGTTTGCTGC
CATGCAAGCAGGGATAAGAGGTGTGGTGTCTGTGGACCTGCTTTGATTAAGAGGTTCAAG
GAAGAGATAGGTGTACAAGGCCTTGCTGATCAGGTGTCAGTCAGTGCATGCTCACATGTG
GGAGGCCATAAGTATGCAGGAAATGTCATTGTTTTCAGTGCAGATGCCAAGGGAGAAGTG
ACTGGTCATTGGTATGGTTATGTTTCTCCTGATGATGTGCCTGTCTTGCTACATAAACAT
ATTGGACAAGGAGAGATCGTGGACCATCTATGGAGGGGTCAGATGGGTTTGTCTGAAGAA
GAGCAGAGGAAAGCCCTGGAGTCTAAACACGTGACAAATGGTGTGACCGAGGATGGTGCC
CATGAATCCCCTGAAGAAACTACCAACGGTTCTGCTTGCAACCCTGTCGCTGCAGGTGGT
TGCTGCCAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGATCTGCCAAAGGAGGATAAG
AGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAAGGGGGCTGACAAAGAGTGTGCT
GCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGG
GAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTC
GCTTTCAGGATCTACAAGAACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTTGTGC
ACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCA
TAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAAGAAAGTGACCAAAGTTGTTT
TGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCCTTGCC
TATTTGTTTACCTTCGCAAGGCAGTGACCCTGCTGTTCGACATGACGATGTTATCTTTAT
TTTGAACTGGAGGTGTTCTTCAGCATGTGGATGCATGCTATTCAGAAAATGGTCAGCTTG
TATTTTTGTCGCTGGTTGCTGCTCCTGTTGTTGAATGTTTTGAGCACTCCATTTATATGG
TAATAAATATTTCATTTTCAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_13009#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 622
fasta sequence

                              [GCTTGCAACCCTGTCGCTGCAGGTGGTTGCTGCCAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGATCTGCCAAAGGAGGATAAGAGCATCACAGTTGAGCAGAACCAGAAGAGCTCCGAGAAGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGATGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATCTACAAGAACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAAGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCCTTGCCTATTTGTTTACCTTCGCAAGGCAGTGACCCTGCTGTTCGACATGACGATGTTATCTTTATTTTGAACTGGAGGGGTTCTTCAGCATGTGGATGCATGCTATTCGGCTTAAAAGGA]

[-] EMBL CB653836             [GCTTGCAACCCTGTCGCTGCAGGTGGTTGCTGCCAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGATCTGCCAAAGGAGGATAAGAGCATCACAGTTGAGCAGAACCAGAAGAGCTCCGAGAAGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGATGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATCTACAAGAACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAAGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCCTTGCCTATTTGTTTACCTTCGCAAGGCAGTGACCCTGCTGTTCGACATGACGATGTTATCTTTATTTTGAACTGGAGGGGTTCTTCAGCATGTGGATGCATGCTATTCGGCTTAAAAGGA]




>consensus_13009#1
GCTTGCAACCCTGTCGCTGCAGGTGGTTGCTGCCAGGGCAATGGAGGCTTTACCTGCTGC
CAGAGTGATCTGCCAAAGGAGGATAAGAGCATCACAGTTGAGCAGAACCAGAAGAGCTCC
GAGAAGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGT
TCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGATGCTCTTGGTATT
GTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATCTACAAGAACCTCAATTGAGAA
TCCTCAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTG
CTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTA
ATCTGAAGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTT
AATCTCCAAGTTTTCCCACGCCTTGCCTATTTGTTTACCTTCGCAAGGCAGTGACCCTGC
TGTTCGACATGACGATGTTATCTTTATTTTGAACTGGAGGGGTTCTTCAGCATGTGGATG
CATGCTATTCGGCTTAAAAGGA

consensusID : consensus_13009#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 523
fasta sequence

                              [CCCTGTCGGTGCAGGTGGTTGGTGCCCAAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGGATTTGCCAAAGGAGGATAAGAGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAAAGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATATACAAGAACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAACGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCCTTGCCTATTTAAAAAAAAAGCGGC]

[-] EMBL AU225780             [CCCTGTCGGTGCAGGTGGTTGGTGCCCAAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGGATTTGCCAAAGGAGGATAAGAGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAAAGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATATACAAGAACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAACGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCCTTGCCTATTTAAAAAAAAAGCGGC]




>consensus_13009#2
CCCTGTCGGTGCAGGTGGTTGGTGCCCAAGGGCAATGGAGGCTTTACCTGCTGCCAGAGT
GGATTTGCCAAAGGAGGATAAGAGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAA
AGGGGGCTGACAAAGAGTGTGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCA
TGCCAACCTGGTTTGAGACATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTG
CAGCTGCTGCATCGGTGTTCGTCGCTTTCAGGATATACAAGAACCTCAATTGAGAATCCT
CAGAACAGGGCTAGGTTTTGTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGT
GAGAATAATATACTACGTGTGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCT
GAACGAAAGTGACCAAAGTTGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAAT
CTCCAAGTTTTCCCACGCCTTGCCTATTTAAAAAAAAAGCGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13009#0      ATTTTCCCCAAGCTCCCGAAGCGATTTCCATTTCAACTGCTCTTCCTCCCTTCGCAGCAC 60
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      GCACGTCGCCGTAGCCACATGGCCGACCCTTCCAGATCCTCCCCCACCGCGGCCGCCGCC 120
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      GGCGACGCCCTCCTGGCGGCGGCGGCGGCGCCCGGTGACGCGCCGGACGCGACCGCCCTC 180
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      GCCGTGGCGGCCGATGCGGACGCGGAGTTCGGGTTCCAGCGCGCGGAGCTCGGGACGGAG 240
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      AAGCTGGCCGGCACGGTGCAGTTCCACGAGCGCCACGTCTTCCTCTGCTACAAGGGGCCC 300
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      GAGGTGTGGCCGTCCCACGTCGAGGCCGCGGAGTCTGACCGCCTCCCCCGCCTCCTCGCC 360
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      GCCGCCATCAAGACCCACAAGTCGGACTTGAAGAAGAAAACCAAATTGACCATTTGTGAA 420
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      GGAGAAGATGGCACTGAGTCATCCAATGGAGACGTGTTGATCTTTCCAGATATGATCAGA 480
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      TACAGAGGGCTGACCCACTTTGATGTTGACAACTTTGTTCAAGAAGTGCTTGTGAAAGAT 540
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      ACTGAATGGCTTCCTGGATCTCCTGAGGCTATAAAAGGTTCCTATGTTTTTGTTTGCTGC 600
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      CATGCAAGCAGGGATAAGAGGTGTGGTGTCTGTGGACCTGCTTTGATTAAGAGGTTCAAG 660
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      GAAGAGATAGGTGTACAAGGCCTTGCTGATCAGGTGTCAGTCAGTGCATGCTCACATGTG 720
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      GGAGGCCATAAGTATGCAGGAAATGTCATTGTTTTCAGTGCAGATGCCAAGGGAGAAGTG 780
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      ACTGGTCATTGGTATGGTTATGTTTCTCCTGATGATGTGCCTGTCTTGCTACATAAACAT 840
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      ATTGGACAAGGAGAGATCGTGGACCATCTATGGAGGGGTCAGATGGGTTTGTCTGAAGAA 900
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      GAGCAGAGGAAAGCCCTGGAGTCTAAACACGTGACAAATGGTGTGACCGAGGATGGTGCC 960
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      CATGAATCCCCTGAAGAAACTACCAACGGTTCTGCTTGCAACCCTGTCGCTGCAGGTGGT 1020
consensus_13009#1      ---------------------------------GCTTGCAACCCTGTCGCTGCAGGTGGT 27
consensus_13009#2      -----------------------------------------CCCTGTCGGTGCAGGTGGT 19
                                                                ******** **********

consensus_13009#0      TGCTGCC--AGGGCAATGGAGGCTTTACCTGCTGCCAGAGTG-ATCTGCCAAAGGAGGAT 1077
consensus_13009#1      TGCTGCC--AGGGCAATGGAGGCTTTACCTGCTGCCAGAGTG-ATCTGCCAAAGGAGGAT 84
consensus_13009#2      TGGTGCCCAAGGGCAATGGAGGCTTTACCTGCTGCCAGAGTGGATTTGCCAAAGGAGGAT 79
                       ** ****  ********************************* ** **************

consensus_13009#0      AAGAGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAA-GGGGGCTGACAAAGAGTG 1136
consensus_13009#1      AAGAGCATCACAGTTGAGCAGAACCAGAAGAGCTCCGAGAA-GGGGGCTGACAAAGAGTG 143
consensus_13009#2      AAGAGCATCACAGCTGAGCAGAACCAGAAGAGCTCCGAGAAAGGGGGCTGACAAAGAGTG 139
                       ************* *************************** ******************

consensus_13009#0      TGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGAC 1196
consensus_13009#1      TGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGAC 203
consensus_13009#2      TGCTGCTGGCAGCAAGAAGAGGCACATGAAGATGTGTTCCATGCCAACCTGGTTTGAGAC 199
                       ************************************************************

consensus_13009#0      ATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTT 1256
consensus_13009#1      ATGGGAAACGGCTGACACCTATGATGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTT 263
consensus_13009#2      ATGGGAAACGGCTGACACCTATGCTGCTCTTGGTATTGTTGCAGCTGCTGCATCGGTGTT 259
                       *********************** ************************************

consensus_13009#0      CGTCGCTTTCAGGATCTACAAGAACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTT 1316
consensus_13009#1      CGTCGCTTTCAGGATCTACAAGAACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTT 323
consensus_13009#2      CGTCGCTTTCAGGATATACAAGAACCTCAATTGAGAATCCTCAGAACAGGGCTAGGTTTT 319
                       *************** ********************************************

consensus_13009#0      GTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTG 1376
consensus_13009#1      GTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTG 383
consensus_13009#2      GTGCACTAAGGACAGTCTACTGCTGTAAAACAGTCTGCTGTGAGAATAATATACTACGTG 379
                       ************************************************************

consensus_13009#0      TGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAA-GAAAGTGACCAAAGT 1435
consensus_13009#1      TGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAA-GAAAGTGACCAAAGT 442
consensus_13009#2      TGCATAGTAATGCAAGATTAGAACTTTAAAGTAGCTAATCTGAACGAAAGTGACCAAAGT 439
                       ******************************************** ***************

consensus_13009#0      TGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCC 1495
consensus_13009#1      TGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCC 502
consensus_13009#2      TGTTTTGGGTAATGTCGTCCTCATGTGAAACTCTGCTTAATCTCCAAGTTTTCCCACGCC 499
                       ************************************************************

consensus_13009#0      TTGCCTATTTGTTTACCTTCGCAAGGCAGTGACCCTGCTGTTCGACATGACGATGTTATC 1555
consensus_13009#1      TTGCCTATTTGTTTACCTTCGCAAGGCAGTGACCCTGCTGTTCGACATGACGATGTTATC 562
consensus_13009#2      TTGCCTATTTAAAAAA------AAAGCGGC------------------------------ 523
                       **********    *       ** ** *                               

consensus_13009#0      TTTATTTTGAACTGGAGGTGTTCTTCAGCATGTGGATGCATGCTATTCAGAAAATGGTCA 1615
consensus_13009#1      TTTATTTTGAACTGGAGGGGTTCTTCAGCATGTGGATGCATGCTATTCGGCTTAAAAGGA 622
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      GCTTGTATTTTTGTCGCTGGTTGCTGCTCCTGTTGTTGAATGTTTTGAGCACTCCATTTA 1675
consensus_13009#1      ------------------------------------------------------------
consensus_13009#2      ------------------------------------------------------------
                                                                                   

consensus_13009#0      TATGGTAATAAATATTTCATTTTCAAAAAAAAAAAAAAAAAAAA 1719
consensus_13009#1      --------------------------------------------
consensus_13009#2      --------------------------------------------