cluster # 13014

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Oryza sativa
cluster # 13014 cluster # 13014 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13014#0 length = 1261 sequences # 7

consensus_13014#1 length = 1105 sequences # 4
consensus_13014#2 length = 182 sequences # 1

consensusID : consensus_13014#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1261
fasta sequence

                              [GGTGAAGCCGCTAGGGTTTATCGCCGCCGCTCCGACCACTTCACTAGGGTTTTGCACGCGGCGGCGGCGGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACCGCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGAGGCGCTCGACGAGGGGAAGCCCATCCCCACCGAGCTCCGCAACGAGGAGCTCGCCCTCCGCCGCGAGATCGACCTCGAGGACAAGGACTCCGCTGTTCCGAGGAGCCTCATCGATGACGAGTACGCGGGCGCGGCGCTCCGCGAGCCCAAGATCCTACTCACCACCTCTCGCAATCCCAGCGCGCCCCTCACTCAGTTTG-TCAAGGAGCTCAAAG-TCGTCTTCCCTAACTCGCAAAGAATGAACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCGACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTCCATTTGGGCCAACTGCATA-TTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAGATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCACAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGCCAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATCACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGATTCGAGTTGCGACTATATCAGATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACGAGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGATTAGCCTGCAAGGCTGCAACTGCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGTAACGTTAGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTACTGGGTCCAATTTGTTGGATTGTTTTTACACCTCTGCTGTGGATTGGGGCCCAATAACGGCCAATTTTTGTAGAAATGGCAGCCCACATCATGCAAGATAGAACTTCCAAAATCATTTAAAGGAATGTTTTAGTGATGTTATAATTGGGGAATCTGAATGCATCAGATTCAGAGTATGCCA]

[+] EMBL AK060859             [GGTGAAGCCGCTAGGGTTTATCGCCGCCGCTCCGACCACTTCACTAGGGTTTTGCACGCGGCGGCGGCGGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACCGCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGAGGCGCTCGACGAGGGGAAGCCCATCCCCACCGAGCTCCGCAACGAGGAGCTCGCCCTCCGCCGCGAGATCGACCTCGAGGACAAGGACTCCGCTGTTCCGAGGAGCCTCATCGATGACGAGTACGCGGGCGCGGCGCTCCGCGAGCCCAAGATCCTACTCACCACCTCTCGCAATCCCAGCGCGCCCCTCACTCAGTTTG TCAAGGAGCTCAAAG TCGTCTTCCCTAACTCGCAAAGAATGAACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCGACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTCCATTTGGGCCAACTGCATA TTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAGATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCACAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGCCAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATCACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGATTCGAGTTGCGACTATATCAGATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACGAGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGATTAGCCTGCAAGGCTGCAACTGCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGTAACGTTAGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTACTGGGTCCAATTTGTTGGATTGTTTTTACACCTCTGCTGTGGATTGGGGCCCAATAACGGCCAATTTTTGTAGAAATGGCAGCCCACATCATGCAAGATAGAACTTCCAAAAT                                                                    ]
[+] EMBL CF329587             [           TAGGGTTTATCGCCGCCGCTCCGACCACTTCACTAGGGTTTTGCACGCGGCGGCGGCGGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACCGCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGAGGCGCTCGACGAGGGGAAGCCCATCCCCACCGAGCTCCGCAACGAGGAGCTCGCCCTCCGCCGCGAGATCGACCTCGAGGACAAGGACTCCGCTGTTCCGAGGAGCCTCATCGATGACGAGTACGCGGGCGCGGCGCTCCGCGAGCCCAAGATCCTACTCACCACCTCTCGCAATCCCAGCGCGCCCCTCACTCAGTTTG TCAAGGAGCTCAAAG TCGTCTTCCCTAACTCGCAAAGAATGAACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCGACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTCCATTTGGGCCAACTGCATA TTTTGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA753214             [                           CGCTCCGACCACTTCACTAGGGTTTTGCACGCGGCGGCGGCGGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACCGCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGAGGCGCTCGACGAGGGGAAGCCCATCCCCACCGAGCTCCGCAACGAGGAGCTCGCCCTCCGCCGCGAGATCGACCTCGAGGACAAGGACTCCGCTGTTCCGAGGAGCCTCATCGATGACGAGTACGCGGGCGCGGCGCTCCGCGAGCCCAAGATCCTACTCACCACCTCTCGCAATCCCAGCGCGCCCCTCACTCAGTTTG TCAAGGAGCTCAAAG TCGTCTTCCCTAACTCGCAAAGAATGAACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCGACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU056273             [                            GCTCCGACCACTTCACTAGGGTTTTGCACGCGGCGGCGGCGGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACCGCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGAGGCGCTCGACGAGGGGAAGCCCATCCCCACCGAGCTCCGCAACGAGGAGCTCGCCCTCCGCCGCGAGATCGACCTCGAGGACAAGGACTCCGCTGTTCCGAGGAGCCTCATCGATGACGAGTACGCGGGCGCGGCGCTCCGCGAGCCCAAGATCCTACTCACCACCTCTCGCAATCCCAGCGCGCCCCTCACTCAGTTTGTTCAAGGAGCTCAAAGTTCGTCTTCCCTAACTCGCAAAGAATGAACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCGACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTCCATTTGGGCCAACTGCATA TTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAGATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCACAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C27056               [                               CCNACCACTTNANTAGGGTTTTCCACGCGGCGGCGGCGGCGGCNAGATGCTGCGGCGGAACACGCGGCTCCGGCGGNAGTACCTGTACCGCAAGANCCTCGAGGGGAAGNAGCGGCAG ACTACGAGAAGAAGCGGCGCCTCCGGAAGGCGTACGACGAGGGGAAGCCCATCCCCACCGAGCTCCGCAACGAGGAGCTCGCCCTCCGCCGCNANATCNACCTCNAGGACAAGNACTCCGCTGTTCCNAGGAGCCTCATCGATGACGAGTACGCGGGCGCGGNGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF328564             [                                                                                                                CCTGTACCGCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGAGGCGCTCGACGAGGGGAAGCCCATCCCCACCGAGCTCCGCAACGAGGAGCTCGCCCTCCGCCGCGAGATCGACCTCGAGGACAAGGACTCCGCTGTTCCGAGGAGCCTCATCGATGACGAGTACGCGGGCGCGGCGCTCCGCGAGCCCAAGATCCTACTCACCACCTCTCGCAATCCCAGCGCGCCCCTCACTCAGTTTG TCAAGGAGCTCAAAG TCGTCTTCCCTAACTCGCAAAGAATGAACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCGACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTCCATTTGGGCCAACTGCATANTTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAGATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCACAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGCCAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB659564             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATGGTTTAATCGTCTGCCATCTTCCATTTGGGCCAACTGCATA TTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAGATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCACACCCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGCCAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGATTACATCTCATTCAGGCATCACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGATTCGAGTTGCGATTATATCAGATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACGAGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCGTGATTAGCCTGCAAGGTTGCAATTGCTGTAGTACATCAATTTTGAGTTTTTGTTTCATCCTTGTAACGTTAGCTCAGTGTGTGTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTATTGGGTCCAATTTGTTGGATTGTTTTTACACTTTTGCTGTGGATTGGGGCCCAATAACGGCCAATTTTTGTAGAAATGGCAGCCCACATCATGCAAGATAGAACTTCCAAATTCATTTAAAGGAATGTTTTAGTGATGTTATAATTGGGGAATCTGAATGCATCAGATTCAGAGTATGCCA]




>consensus_13014#0
GGTGAAGCCGCTAGGGTTTATCGCCGCCGCTCCGACCACTTCACTAGGGTTTTGCACGCG
GCGGCGGCGGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACC
GCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGAGG
CGCTCGACGAGGGGAAGCCCATCCCCACCGAGCTCCGCAACGAGGAGCTCGCCCTCCGCC
GCGAGATCGACCTCGAGGACAAGGACTCCGCTGTTCCGAGGAGCCTCATCGATGACGAGT
ACGCGGGCGCGGCGCTCCGCGAGCCCAAGATCCTACTCACCACCTCTCGCAATCCCAGCG
CGCCCCTCACTCAGTTTGTCAAGGAGCTCAAAGTCGTCTTCCCTAACTCGCAAAGAATGA
ACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCG
ACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTC
CATTTGGGCCAACTGCATATTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAG
ATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCA
CAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGC
CAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATC
ACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGAT
TCGAGTTGCGACTATATCAGATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACG
AGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGAT
TAGCCTGCAAGGCTGCAACTGCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGT
AACGTTAGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTA
CTGGGTCCAATTTGTTGGATTGTTTTTACACCTCTGCTGTGGATTGGGGCCCAATAACGG
CCAATTTTTGTAGAAATGGCAGCCCACATCATGCAAGATAGAACTTCCAAAATCATTTAA
AGGAATGTTTTAGTGATGTTATAATTGGGGAATCTGAATGCATCAGATTCAGAGTATGCC
A

consensusID : consensus_13014#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1105
fasta sequence

                              [CGCTAGGGTTTATCGCCGCCGCTCCGACCACTTCACTAGGGTTTTGCACGCGGCGGCGGCGGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACCGCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGCGGCGCTCCGCGAGCCGAAGATCCTACTCACCACCTCTCGCAATCCCAGCGCGCCCCTCACTCAGTTTGTCAAGGAGCTCAAAGTCGTCTTCCCTAACTCGCAAAGAATGAACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCGACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTCCATTTGGGCCAACTGCATATTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAGATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCA-CAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGCCAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATCACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGATTCGAGTTGCGACTATATCAGATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACGAGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGATTAGCCTGCAAGGCTGCAACTGCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGTAACGTTAGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTACTGGGTCCAATTTGTTGGATTGTTTTTACACCTCTGCTGTGGATTGGGGCCCAATAACGGCCAATTTTTGTAGAAATGGCAGCCCACATCATGCAAGATAGAACTTCCAAAATCATTTAAAGGAATGTTTTACTGATGTTATAATTGATGAATCTGAATGCATCA]

[+] EMBL AK099613             [CGCTAGGGTTTATCGCCGCCGCTCCGACCACTTCACTAGGGTTTTGCACGCGGCGGCGGCGGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACCGCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGCGGCGCTCCGCGAGCCGAAGATCCTACTCACCACCTCTCGCAATCCCAGCGCGCCCCTCACTCAGTTTGTCAAGGAGCTCAAAGTCGTCTTCCCTAACTCGCAAAGAATGAACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCGACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTCCATTTGGGCCAACTGCATATTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAGATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCA CAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGCCAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATCACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGATTCGAGTTGCGACTATATCAGATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACGAGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGATTAGCCTGCAAGGCTGCAACTGCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGTAACGTTAGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTACTGGGTCCAATTTGTTGGATTGTTTTTACACCTCTGCTGTGGATTGGGGCCCAATAACGGCCAATTTTTGTAGAAATGGCAGCCCACATCATGCAAGATAGAACTTCCAAAATCATTTAAAGGAATGTTTTACTGATGTTATAATTGATGAATCTGAATGCATCA]
[+] EMBL CB000602             [                                                                                                                                                                                                                                                                                                                                                        TGTTTTGGTGCGTGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTCCATTTGGGCCAACTGCATATTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAGATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCA CAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGCCAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATCACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGATTCGAGTTGCGACTATATCAGATCAAGCGAGGAACCGTCGACCAAGCGGAGGCGCAAAACGAGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGATTAGCCTGCAAGGCTGCAACTGCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGTAACGTTAGCT                                                                                                                                                                                                                       ]
[+] EMBL AU166803             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCCCATTTAATACTAGATAACTTCA CAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGCCAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATCACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGATTCGAGTTGCGACTATATCAGATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACGAGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGATTAGCCTGCAAGGCTGCAACTGCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGTAACGTTAGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAAaa                                                                                                                                                                         ]
[-] EMBL CF329588             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TAACTTCACCAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGCCAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATCACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGATTCGAGTTGCGACTATATCAGATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACGAGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGATTAGCCTGCAAGGCTGCAACTGCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGTAACGTTAGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTACTGGGTCCAATTTGTTGGATTGTTTTTACACCTCTGCTGTGGATTGGGGCCCAATAACGGCCAATTTTTGTAGAAATGGCAGCCCACATCATGCAAGATAGAACTTCCAAAATCATTTAAAGGAATGTTTTACTGAaaaaa                        ]




>consensus_13014#1
CGCTAGGGTTTATCGCCGCCGCTCCGACCACTTCACTAGGGTTTTGCACGCGGCGGCGGC
GGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACCGCAAGAGC
CTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGCGGCGCTCCGC
GAGCCGAAGATCCTACTCACCACCTCTCGCAATCCCAGCGCGCCCCTCACTCAGTTTGTC
AAGGAGCTCAAAGTCGTCTTCCCTAACTCGCAAAGAATGAACCGTGGTGGTCAGGTGATA
TCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCGACCTTGTTTTGGTGCATGAA
CATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTCCATTTGGGCCAACTGCATAT
TTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAGATAGGAAGGCCATGGGTAAA
ATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCACAACCAAGACTGGTGAAAGG
ACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGCCAGATTCAAAACGGATAATT
ACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATCACGTATATGAAAAACATGGT
GGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGATTCGAGTTGCGACTATATCAG
ATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACGAGTTTGTGCTACGGCCATAC
ATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGATTAGCCTGCAAGGCTGCAACT
GCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGTAACGTTAGCTCAGTGTGTCT
AATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTACTGGGTCCAATTTGTTGGAT
TGTTTTTACACCTCTGCTGTGGATTGGGGCCCAATAACGGCCAATTTTTGTAGAAATGGC
AGCCCACATCATGCAAGATAGAACTTCCAAAATCATTTAAAGGAATGTTTTACTGATGTT
ATAATTGATGAATCTGAATGCATCA

consensusID : consensus_13014#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 182
fasta sequence

                              [ATCTCTTGGTGCCTGNTTNGCCTGCAAGGCTGCAACTGNTGTAGTNCATCAATTTTGAGTTTNTGTTTCATCCTTGTNACGTTNGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTACTGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU056274             [ATCTCTTGGTGCCTGNTTNGCCTGCAAGGCTGCAACTGNTGTAGTNCATCAATTTTGAGTTTNTGTTTCATCCTTGTNACGTTNGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTACTGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13014#2
ATCTCTTGGTGCCTGNTTNGCCTGCAAGGCTGCAACTGNTGTAGTNCATCAATTTTGAGT
TTNTGTTTCATCCTTGTNACGTTNGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGG
TTCCATCGAAATAGTTACTGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13014#0      GGTGAAGCCGCTAGGGTTTATCGCCGCCGCTCCGACCACTTCACTAGGGTTTTGCACGCG 60
consensus_13014#1      --------CGCTAGGGTTTATCGCCGCCGCTCCGACCACTTCACTAGGGTTTTGCACGCG 52
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      GCGGCGGCGGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACC 120
consensus_13014#1      GCGGCGGCGGCGGCGAGATGCTGCGGCGGAACACGCGGCTCCGGCGGGAGTACCTGTACC 112
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      GCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGGAGG 180
consensus_13014#1      GCAAGAGCCTCGAGGGGAAGGAGCGGCAGCACTACGAGAAGAAGCGGCGCCTCCGGG--- 169
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      CGCTCGACGAGGGGAAGCCCATCCCCACCGAGCTCCGCAACGAGGAGCTCGCCCTCCGCC 240
consensus_13014#1      ------------------------------------------------------------
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      GCGAGATCGACCTCGAGGACAAGGACTCCGCTGTTCCGAGGAGCCTCATCGATGACGAGT 300
consensus_13014#1      ------------------------------------------------------------
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      ACGCGGGCGCGGCGCTCCGCGAGCCCAAGATCCTACTCACCACCTCTCGCAATCCCAGCG 360
consensus_13014#1      ---------CGGCGCTCCGCGAGCCGAAGATCCTACTCACCACCTCTCGCAATCCCAGCG 220
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      CGCCCCTCACTCAGTTTGTCAAGGAGCTCAAAGTCGTCTTCCCTAACTCGCAAAGAATGA 420
consensus_13014#1      CGCCCCTCACTCAGTTTGTCAAGGAGCTCAAAGTCGTCTTCCCTAACTCGCAAAGAATGA 280
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      ACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCG 480
consensus_13014#1      ACCGTGGTGGTCAGGTGATATCGGAAATTGTTGAGTCTTGCCGTTCGCATGATATCACCG 340
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      ACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTC 540
consensus_13014#1      ACCTTGTTTTGGTGCATGAACATCGTGGCCAGCCCGATGGTTTAATCGTCTGCCATCTTC 400
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      CATTTGGGCCAACTGCATATTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAG 600
consensus_13014#1      CATTTGGGCCAACTGCATATTTTGGGTTGCTCAATGTGGTGACACGCCACGATATTAAAG 460
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      ATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCA 660
consensus_13014#1      ATAGGAAGGCCATGGGTAAAATGTCAGAAGCGTACCCCCATTTAATACTAGATAACTTCA 520
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      CAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGC 720
consensus_13014#1      CAACCAAGACTGGTGAAAGGACTGCTAATATTGTCAAGCATCTCTTTCCAGTGCCAAAGC 580
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      CAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATC 780
consensus_13014#1      CAGATTCAAAACGGATAATTACTTTCGCTAACAGAGATGACTACATCTCATTCAGGCATC 640
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      ACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGAT 840
consensus_13014#1      ACGTATATGAAAAACATGGTGGCCCAAAATCCCTTGACCTGAAGGAGGTTGGCCCTCGAT 700
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      TCGAGTTGCGACTATATCAGATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACG 900
consensus_13014#1      TCGAGTTGCGACTATATCAGATCAAGCGAGGAACTGTCGACCAAGCGGAGGCGCAAAACG 760
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      AGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGAT 960
consensus_13014#1      AGTTTGTGCTACGGCCATACATGAACACAGCGAAGAAGCAAAAATCTCTTGGTGCCTGAT 820
consensus_13014#2      -------------------------------------------ATCTCTTGGTGCCTGNT 17
                                                                  *************** *

consensus_13014#0      TAGCCTGCAAGGCTGCAACTGCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGT 1020
consensus_13014#1      TAGCCTGCAAGGCTGCAACTGCTGTAGTACATCAATTTTGAGTTTCTGTTTCATCCTTGT 880
consensus_13014#2      TNGCCTGCAAGGCTGCAACTGNTGTAGTNCATCAATTTTGAGTTTNTGTTTCATCCTTGT 77
                       * ******************* ****** **************** **************

consensus_13014#0      AACGTTAGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTA 1080
consensus_13014#1      AACGTTAGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTA 940
consensus_13014#2      NACGTTNGCTCAGTGTGTCTAATGTATCCTGCTGTGATAATGGTTCCATCGAAATAGTTA 137
                        ***** *****************************************************

consensus_13014#0      CTGGGTCCAATTTGTTGGATTGTTTTTACACCTCTGCTGTGGATTGGGGCCCAATAACGG 1140
consensus_13014#1      CTGGGTCCAATTTGTTGGATTGTTTTTACACCTCTGCTGTGGATTGGGGCCCAATAACGG 1000
consensus_13014#2      CTGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------------- 182
                       **********        *        * *            *                 

consensus_13014#0      CCAATTTTTGTAGAAATGGCAGCCCACATCATGCAAGATAGAACTTCCAAAATCATTTAA 1200
consensus_13014#1      CCAATTTTTGTAGAAATGGCAGCCCACATCATGCAAGATAGAACTTCCAAAATCATTTAA 1060
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      AGGAATGTTTTAGTGATGTTATAATTGGGGAATCTGAATGCATCAGATTCAGAGTATGCC 1260
consensus_13014#1      AGGAATGTTTTACTGATGTTATAATTGATGAATCTGAATGCATCA--------------- 1105
consensus_13014#2      ------------------------------------------------------------
                                                                                   

consensus_13014#0      A 1261
consensus_13014#1      -
consensus_13014#2      -