These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13015#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2622 fasta sequence [CCGGAGCGCAGTACGTGACACCCGCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCGTCACCCGCTACGCCTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACCCTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCTCCTACAACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGG-GAGATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCT-GGAATGGACGTGAACTGCGGCAGCTACGTGCAGGAACATGGTCTATCTGCAATCCAGCAAGGGAAGATCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGATGAGGCTGGGGCTCTTCAACGGCAACCCAAAGTACAACCGCTACGGTAACATTGGCCCAGACCAGGTGTGCACGCAGGAGCACCAAAACC-TTGCCCTTGAAGCAGCACAACA-TGGCGTTGTCCTAC-TGAAGAACGACGCCAATGCTCTCCCCCTGTCCAAATCACAAGTCTCATCCATTGCTGTCATTGGGCACAACGCAAATGACGCCACGAGATTGCTTGGGAATTACTTCGGCCCTCCTTGCATATCGGTGACTCCTCTCCAAGTGCTGCAAGGCTATGTGAAGGACACCAGGTTCCTAGCTGGGTGCAACTCGGCTGCCTGCAATGTGTCATCAATTGGTGAAGCGGCGCAATTGGCAAGTTCAGTGGACTACGTTGTGCTGTTCATGGGATTAGACCAAGATCAGGAGAGGGAAGAGGTTGATAGGCTGGAACTGTCGCCCCCAGGAATGCAGGAGAACCTCACCAACACGGTCGCTAACGCGGCAAAGAAGCCGGTGATCTTGGTGCTACTGTGTGGTGGTCCAGTGGATGTGACCTTTGCTAAGTATAATCCCAAGATTGGGGCCATCCTGTGGGCTGGTTACCCTGGCGAGGCTGGAGGGATTGCGATTGCTCAGGTCCTCTTTGGAGAGCACAACCCTGGTGGAAGGCTGCCAGTGACCTGGTATCCAAAGGAGTTCACGAGCGTGCCCATGACAGATATGCGGATGCGTGCCGATCCATCCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGC-AGGCACCCCGTGCTGC-TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG-CCAGCTG-ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCACAAAAAAAAAAAGA] [+] EMBL AK119887 [CCGGAGCGCAGTACGTGACACCCGCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCGTCACCCGCTACGCCTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACCCTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCTCCTACAACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGG GAGATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCT GGAATGGACGTGAACTGCGGCAGCTACGTGCAGGAACATGGTCTATCTGCAATCCAGCAAGGGAAGATCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGATGAGGCTGGGGCTCTTCAACGGCAACCCAAAGTACAACCGCTACGGTAACATTGGCCCAGACCAGGTGTGCACGCAGGAGCACCAAAACC TTGCCCTTGAAGCAGCACAACA TGGCGTTGTCCTAC TGAAGAACGACGCCAATGCTCTCCCCCTGTCCAAATCACAAGTCTCATCCATTGCTGTCATTGGGCACAACGCAAATGACGCCACGAGATTGCTTGGGAATTACTTCGGCCCTCCTTGCATATCGGTGACTCCTCTCCAAGTGCTGCAAGGCTATGTGAAGGACACCAGGTTCCTAGCTGGGTGCAACTCGGCTGCCTGCAATGTGTCATCAATTGGTGAAGCGGCGCAATTGGCAAGTTCAGTGGACTACGTTGTGCTGTTCATGGGATTAGACCAAGATCAGGAGAGGGAAGAGGTTGATAGGCTGGAACTGTCGCCCCCAGGAATGCAGGAGAACCTCACCAACACGGTCGCTAACGCGGCAAAGAAGCCGGTGATCTTGGTGCTACTGTGTGGTGGTCCAGTGGATGTGACCTTTGCTAAGTATAATCCCAAGATTGGGGCCATCCTGTGGGCTGGTTACCCTGGCGAGGCTGGAGGGATTGCGATTGCTCAGGTCCTCTTTGGAGAGCACAACCCTGGTGGAAGGCTGCCAGTGACCTGGTATCCAAAGGAGTTCACGAGCGTGCCCATGACAGATATGCGGATGCGTGCCGATCCATCCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGC AGGCACCCCGTGCTGC TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG CCAGCTG ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATATGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCAC ] [+] EMBL CB671635 [ GACACCCGCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACTGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGC ] [+] EMBL CB643267 [ GCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCGTCACCCGCTAC ] [+] EMBL CB643270 [ GCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCGTCACCCGCTACGCCTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACCCTCCGTT ] [+] EMBL C73113 [ CTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACCCTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCTCCTACAACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGGTGAGATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCTGGGAATGGACGTGAACTGCGGCA NTACGTGCAGGAACATGGTCTATCTGCAATCCA ] [+] EMBL C98928 [ AACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGG GAGATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCT GGAATGGACGTGAACTGCGGCAG TACGTGCAGGAACATGGTCTATCTGCAATCCAGCAAGGGAAGATCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGATGAGGCTGGGGCTCTTCAACGGCAATCCAAAGTACAACCGCTACGGTAACATTGGCCCAGACCAGGTGTGCACGCAGGAGCACCAAAACCTTTGCCCTTGAAGCAGCACAACATTGGCGTTGTCCTACTTGAAGAACGACGCCAt ] [-] EMBL CB643271 [ TCACGAGCGTGCCCATGACAGATATGCGGATGCGTGCCGATCCATCCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGC AGGCACCCCGTGCTGC TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG CCAGCTG ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACCCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCAAAAAAAAAAAAAGA] [-] EMBL CB671636 [ GGACGAACGTACAGGTTCTACGGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGC AGGCACCCCGTGCTGC TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG CCAGCTG ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATGT ACTTATGTGAACAAGAGA ] [-] EMBL CB643268 [ ACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGC AGGCACCCCGTGCTGC TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG CCAGCTG ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAA ] [+] EMBL AU075385 [ ATGGCCCCATGGACGGC AGGCACCCCGTGCTGC TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG CCAGCTG ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAaaa ] [+] EMBL C98929 [ CGGCAAGCCACCCCGTGCTGCTTCTTCCTGCGCTGGCCGAACGGCGCGCCGGACGGCGGCAAGCCGNCGAGCCCAGCTGAATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAA ] consensusID : consensus_13015#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 667 fasta sequence [GGNCAATACCNTATTAAGGGACCAAGCTGGAGTCAACCGGGTGCGGCCGNTNGAGTTAACGCGTTTTCGAAACGTGTAACGAGCTTAAGTTCCGGGGGTTTGTCAGGGTGCAGAACCATGGCCCCATGNACGGCAGGCAACCCGTGCTGNTCTTCGTGGGGTGGCCGAAAGGCCGGGCGGACGGAGGCAGGCCGGCGAGCNAGCTGATCGGNTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCAATTCAGCAGAGCACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGACTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCACCGTTGACGTCATAACAAAAAAAAAAAAAAAAAACGGTCCGCGGCCACTCGAGTCGA] [-] EMBL BQ172868 [GGNCAATACCNTATTAAGGGACCAAGCTGGAGTCAACCGGGTGCGGCCGNTNGAGTTAACGCGTTTTCGAAACGTGTAACGAGCTTAAGTTCCGGGGGTTTGTCAGGGTGCAGAACCATGGCCCCATGNACGGCAGGCAACCCGTGCTGNTCTTCGTGGGGTGGCCGAAAGGCCGGGCGGACGGAGGCAGGCCGGCGAGCNAGCTGATCGGNTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCAATTCAGCAGAGCACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGACTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCACCGTTGACGTCATAACAAAAAAAAAAAAAAAAAACGGTCCGCGGCCACTCGAGTCGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13015#0 CCGGAGCGCAGTACGTGACACCCGCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCC 60 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 TCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCG 120 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 CCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACC 180 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 CGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGA 240 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 AGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACA 300 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 AGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACG 360 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 GCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACC 420 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 CGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACA 480 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 ACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGA 540 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 GGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCG 600 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 CCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACC 660 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 TCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCG 720 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 TCACCCGCTACGCCTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACC 780 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 CTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCTCCTACAACC 840 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 GCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGGGAG 900 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 ATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATG 960 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 TCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCTGGAATGG 1020 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 ACGTGAACTGCGGCAGCTACGTGCAGGAACATGGTCTATCTGCAATCCAGCAAGGGAAGA 1080 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 TCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGATGAGGCTGG 1140 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 GGCTCTTCAACGGCAACCCAAAGTACAACCGCTACGGTAACATTGGCCCAGACCAGGTGT 1200 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 GCACGCAGGAGCACCAAAACCTTGCCCTTGAAGCAGCACAACATGGCGTTGTCCTACTGA 1260 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 AGAACGACGCCAATGCTCTCCCCCTGTCCAAATCACAAGTCTCATCCATTGCTGTCATTG 1320 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 GGCACAACGCAAATGACGCCACGAGATTGCTTGGGAATTACTTCGGCCCTCCTTGCATAT 1380 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 CGGTGACTCCTCTCCAAGTGCTGCAAGGCTATGTGAAGGACACCAGGTTCCTAGCTGGGT 1440 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 GCAACTCGGCTGCCTGCAATGTGTCATCAATTGGTGAAGCGGCGCAATTGGCAAGTTCAG 1500 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 TGGACTACGTTGTGCTGTTCATGGGATTAGACCAAGATCAGGAGAGGGAAGAGGTTGATA 1560 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 GGCTGGAACTGTCGCCCCCAGGAATGCAGGAGAACCTCACCAACACGGTCGCTAACGCGG 1620 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 CAAAGAAGCCGGTGATCTTGGTGCTACTGTGTGGTGGTCCAGTGGATGTGACCTTTGCTA 1680 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 AGTATAATCCCAAGATTGGGGCCATCCTGTGGGCTGGTTACCCTGGCGAGGCTGGAGGGA 1740 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 TTGCGATTGCTCAGGTCCTCTTTGGAGAGCACAACCCTGGTGGAAGGCTGCCAGTGACCT 1800 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 GGTATCCAAAGGAGTTCACGAGCGTGCCCATGACAGATATGCGGATGCGTGCCGATCCAT 1860 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 CCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCG 1920 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 GCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGC 1980 consensus_13015#1 ------------------------------------------------------------ consensus_13015#0 CGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGA 2040 consensus_13015#1 -------GGNCAATACCNT--ATTAAGGGACCAAGCTGGAGTCAACCG--GGTGCGGC-- 47 * ** * * * * * * * ** * * ** *** consensus_13015#0 GCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCG 2100 consensus_13015#1 -CGNTNGAGTTAACGCGTTT----TCGAAACGTGTAACGAGCTTAAGTTCCGGGGGTTTG 102 * * ** * * * ** *** ****** ** **** ******* ** * * * consensus_13015#0 TCAGGGTGCAGAACCATGGCCCCATGGACGGCAGGCACCCCGTGCTGCTCTTCCTGCGCT 2160 consensus_13015#1 TCAGGGTGCAGAACCATGGCCCCATGNACGGCAGGCAACCCGTGCTGNTCTTCGTGGGGT 162 ************************** ********** ********* ***** ** * * consensus_13015#0 GGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAGCCAGCTGATCGGCTTCCAGAGCC 2220 consensus_13015#1 GGCCGAAAGGCCGGGCGGACGGAGGCAGGCCGGCGAGCNAGCTGATCGGNTTCCAGAGCC 222 ******* *** ********* *************** ********** ********** consensus_13015#0 TGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACT 2280 consensus_13015#1 TGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCAAT 282 ********************************************************** * consensus_13015#0 TCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGG 2340 consensus_13015#1 TCAGCAGAGC-ACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGG 341 ********** ************************************************* consensus_13015#0 TTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAG-CTGGGTCCAGTTCATT 2399 consensus_13015#1 TTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGACTGGGTCCAGTTCATT 401 ******************************************* **************** consensus_13015#0 GAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTG 2459 consensus_13015#1 GAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTG 461 ************************************************************ consensus_13015#0 CTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGT 2519 consensus_13015#1 CTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGT 521 ************************************************************ consensus_13015#0 GTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAG 2579 consensus_13015#1 GTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAG 581 ************************************************************ consensus_13015#0 AGAATGATTATTTAAGAAAGATTGAGGCAC------------AAAAAAAAAAAGA----- 2622 consensus_13015#1 AGAATGATTATTTAAGAAAGATTGAGGCACCGTTGACGTCATAACAAAAAAAAAAAAAAA 641 ****************************** ** ******** * consensus_13015#0 -------------------------- consensus_13015#1 AAACGGTCCGCGGCCACTCGAGTCGA 667 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||