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Oryza sativa
cluster # 13018 cluster # 13018       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13018#0 length = 1956 sequences # 9  
consensus_13018#1 length = 1153 sequences # 3  

consensusID : consensus_13018#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1956
fasta sequence
                              [CCCCCCAACCTCCCTCTCCCTCTCTACACTACTCGCAGCCGCATCGGCTGCCAGCCAGCCCAGCGCGGTGGTTGTTGGGTGGTTGCCTTCTCCCCTCCCCACCACCACCATCTTCTCACTGATCTCTCCACGCCGATCCATCCATCCACCGATCGCCTCCCCTCTCCCGCACTGATCAGTAGTGGTAGAGTGAGTTGAATCTTGGCCGTGATCGATCTTGCTGGGATCTGATAGGGGTGGGAGTCAGTGGAGGGATGGAGGGGGAGGACGAGGTGAGGGTGAATGGGGCTGTGGAGGTAGCGGAGGTGGTGGCGGAGGGGGATCTCGCCAGTGGGGGGGAGGCGGCGGCGGCGGGTGGATCTGATCAGGCGGTGGTGGTGGTGGCGATGGCCGCGGAGGGGACGACGGCCAAGAAGGGCGGATCGGGGGGCGCGGCCGCGGCGAGGAAGGCGAAGGTGGCGGCGGCGGTGGCCAACGGCAAGGTGGGGAAGAAGCCCGCGCTGTCGCAGAGCGCGTCGTTCCCGGCGAGAGGGGCGGCTGCCAAGAAGGCGGCGACACCAAAGCAGGCCAAGACGACGGACGGGAAAGGCGCTGTGCCCAATGGATCGGAGAAGGCGGCTGGGCGAGCCGTGGAGAAGAAGGTGAATTCAGCCCGGACGCCTGCCGCAAGCCGCTCCTTGCCTGTTAAATCTGGATCGGTGGACGCGCCTCCAAATGATGCTTCTCCTGAAACCCAAGAGTCAAACGAGAACACCACAAATGCTTTGGAACAGACTCTGCCAGAGAAAATGGAGGATGATGTGCACTCCACCACATCGAGTACCAATACTCCCCGAGCAGCTGCTCAACGCAAGAATGCTGCTGCTGCTGCTGGTTTTAGTTTCAGGCTGCAGGAGCGTGCTGAGAAGAGGAAGGAGTTCTACCAAAAACTTGAAGAGAAGATCCATGCAAAGGAGCTTGAACAAACAAATTTGCAGGCAAAATCTAAAGAGAGCCAAGAGGCTGAGATCAAATTACTTAGGAAGAGCCTGACATTTAAAGCGACACCCATGCCAAGCTTTTACAAGGAGCAACCTCCTAAAGTTGAGTTGAAAAAGATCCCACCAACACGCGCTAGGTCACCAAAGCTTGGCCGGCACAAGCCAACCAATTCTGCTGCTGCTGCTTCTGTTGAT-GGTTCTGTATCATGTGAGAGTCCTCGGAGCATAACTAATTTGGCCAAATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTACTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTGCAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAGCTCCAAGAGCCAAGGTAGAGCAATTGCAAG-ACAACTCGGTTGAAATCCCTCCTGCTGAACCTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCACCACTTTGGTTGCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACATTTGGTTATTTAATCCCTTCTTGCAGTCTTGTG-AATAGTGA-GGTGT-GTGCTTCAT-GGA-AAGTTGATTCGCTCAAAGTACCG-TGGATTTGTCATTTCCGGAGTAGACAT-CCCCTTTTTTTCAGCTTGTCATT-AAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATTGGAGTTATATGTCAATGGGCAGGCTAGGACTGTTG-CAGAACATCAATGCAACTTGTGAATTATTTTGTGTTATAAGTTGATTCTCCTTGGTCCTTGCCCAGTATATCCTTCTTCACCTGTTGCAGGCTTGCAGCAGTTGGTTTCCAAATGTCCAATGCTGTCTGTTTAAATTGGGAGTTAAAAGATACATGAATCATTAGTC]

[+] EMBL AK073940             [CCCCCCAACCTCCCTCTCCCTCTCTACACTACTCGCAGCCGCATCGGCTGCCAGCCAGCCCAGCGCGGTGGTTGTTGGGTGGTTGCCTTCTCCCCTCCCCACCACCACCATCTTCTCACTGATCTCTCCACGCCGATCCATCCATCCACCGATCGCCTCCCCTCTCCCGCACTGATCAGTAGTGGTAGAGTGAGTTGAATCTTGGCCGTGATCGATCTTGCTGGGATCTGATAGGGGTGGGAGTCAGTGGAGGGATGGAGGGGGAGGACGAGGTGAGGGTGAATGGGGCTGTGGAGGTAGCGGAGGTGGTGGCGGAGGGGGATCTCGCCAGTGGGGGGGAGGCGGCGGCGGCGGGTGGATCTGATCAGGCGGTGGTGGTGGTGGCGATGGCCGCGGAGGGGACGACGGCCAAGAAGGGCGGATCGGGGGGCGCGGCCGCGGCGAGGAAGGCGAAGGTGGCGGCGGCGGTGGCCAACGGCAAGGTGGGGAAGAAGCCCGCGCTGTCGCAGAGCGCGTCGTTCCCGGCGAGAGGGGCGGCTGCCAAGAAGGCGGCGACACCAAAGCAGGCCAAGACGACGGACGGGAAAGGCGCTGTGCCCAATGGATCGGAGAAGGCGGCTGGGCGAGCCGTGGAGAAGAAGGTGAATTCAGCCCGGACGCCTGCCGCAAGCCGCTCCTTGCCTGTTAAATCTGGATCGGTGGACGCGCCTCCAAATGATGCTTCTCCTGAAACCCAAGAGTCAAACGAGAACACCACAAATGCTTTGGAACAGACTCTGCCAGAGAAAATGGAGGATGATGTGCACTCCACCACATCGAGTACCAATACTCCCCGAGCAGCTGCTCAACGCAAGAATGCTGCTGCTGCTGCTGGTTTTAGTTTCAGGCTGCAGGAGCGTGCTGAGAAGAGGAAGGAGTTCTACCAAAAACTTGAAGAGAAGATCCATGCAAAGGAGCTTGAACAAACAAATTTGCAGGCAAAATCTAAAGAGAGCCAAGAGGCTGAGATCAAATTACTTAGGAAGAGCCTGACATTTAAAGCGACACCCATGCCAAGCTTTTACAAGGAGCAACCTCCTAAAGTTGAGTTGAAAAAGATCCCACCAACACGCGCTAGGTCACCAAAGCTTGGCCGGCACAAGCCAACCAATTCTGCTGCTGCTGCTTCTGTTGAT GGTTCTGTATCATGTGAGAGTCCTCGGAGCATAACTAATTTGGCCAAATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTACTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTGCAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAGCTCCAAGAGCCAAGGTAGAGCAATTGCAAG ACAACTCGGTTGAAATCCCTCCTGCTGAACCTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCACCACTTTGGTTGCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACATTTGGTTATTTAATCCCTTCTTGCAGTCTTGTG AATAGTGA GGTGT GTGCTTCAT GGA AAGTTGATTCGCTCAAAGTACCG TGGATTTGTCATTTCCGGAGTAGACAT CCCCTTTTTTTCAGCTTGTCATT AAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATTGGAGTTATATGTCAATGGGCAGGCTAGGACTGTTG CAGAACATCAATGCAACTTGTGAATTATTTTGTGTTATAAGTTGATTCTCCTTGGTC                                                                                                              ]
[-] EMBL CA756125             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATACTCCCCGAGCAGCTGCTCAACGCAAGAATGCTGCTGCTGCTGCTGG TTTAGTTTCAGGCTGCAGGAGCGTGCTGAGAAGAGGAAGGAGTTCTACCAAAAACTGNAAGAGAAGATNCATGCAAAGGAGCTTGAACAAACAAATTTGCAGGCAAAATCTAAAGAGAGCCAAGAGGCTGAGATCAAATTACTTAGGAAGAGCCTGACATNTAAAGCGACACCCATGCCAAGCTTTTACAAGGAGCAACCTCCTAAAGTTGAGTTGAAAAAGATCCCACCAACACGCGCTAGGTCACCAAAGCTTGGCCGGCACAAGCCAACCAATTCTGCTGCTGCTGCTTCTGTTGAT GGTTCTGTATCATGTGAGAGTCCTCGGAGCATAACTAATTTGGCCAAATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTACTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTGCAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAGCTCCAAGAGCCAAGGTAGAGCAATTGCAAG ACAACTCGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF310328             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTCCTAAAGTTGAGTTGAAAAAGATCCCACCAACACGCGCTAGGTCACCAAAGCTTGGCCGGCACAAGCCAACCAATTCTGCTGCTGCTGCTTCTGTTGAT GGTTCTGTATCATGTGAGAGTCCTCGGAGCATAACTAATTTGGCCAAATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTACTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTGCAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAGCTCCAAGAGCCAAGGTAGAGCAATTGCAAGAACAACTCGGTTGAAATCCCTCCTGCTGAACCTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCACCACTTTGGTTGCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACATTTGGTTATTTAATCCCTTCTTGCAGTCTTGTG  ATAGTGANGGTGT GTGCTTCAT GGA AAGTTGATTCGCTCAAAGTACCG TGGATTTGTCATTTCCGGAGTAGACAT CCCCTTTTTTTCAGCTTGTCATT AAGCATTCCATTGT                                                                                                                                                                                                                                                             ]
[-] EMBL CB658497             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAATTCTGCTGCTGCTGCTTCTG TGATGGGTTCTGTATCATGTGAGAGTCCTCGGAGCATAACTAATTTGGCCAAATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTACTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTGCAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAGCTCCAAGAGCCAAGGTAGAGCAATTGCAAG ACAACTCGGTTGAAATCCCTCCTGCTGAACCTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCACCACTTTGGTTGCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACATTTGGTTATTTAATCCCTTCTTGCAGTCTTGTG AATAGTGA GGTGT GTGCTTCAT GGA AAGTTGATTCGCTCAAAGTACCG TGGATTTGTCATTTCCGGAGTAGACAT CCCCTTTTTTTCAGCTTGTCATT AAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATTGGAGTTATATGTCAATGGGCAGGCTAGGACTGTTG CAGAACATCAATGCAACTTGTGAATTATTTTGTGTTATAAGTTGATTCTCCTTGGTCCTTGCCCAGTATATCCTTCTTCACCTGTTGCAGGCTTGCAGCAGTTGGTTTCCAAATGTCCAATGCTGTCTGTTTAAATTGGGAGTTAAAAGATACATGAATCATTAGTC]
[-] EMBL BI305306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cCAAACCTAATGCTACTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTGCAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAGCTCCAAGAGCCAAGGTAGAGCAATTGCAAG ACAACTCGGTTGAAATCCCTCCTGCTGAACCTTCTGGCCCAGAGGAGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCACCACTTTGGTTGCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACATTTGGTTATTTAATCCCTTCTTGCAGTCTTGTG AATAGTGA GGTGT GTGCTTCAT GGA AAGTTGATTCGCTCAAAGTACCG TGGATTTGTCATTTCCGGAGTAGACAT CCCCTTTTTTTCAGCTTGTCATT AAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATTGGAGTTATATGTCAATGGGCAGGCTAGGACTGTTG CAGAACATCAATGCAACTTGTGAATTATTTTGTGTTATAAGTTGATTCTCCTTGGTCC                                                                                                             ]
[-] EMBL BU673266             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGTAGAGCAATTGCAAG ACAACTCGGTTGAAATCCCTCCTGCTGAACCTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCACCACTTTGGTTTCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACATTTGGTTATTTAATCCCTTCTTGCAGTCTTGTG AATAGTGA GGTGT GTGCTTCAT GGA AAGTTGATTCGCTCAAAGTACCG TGGATTTGTCATTTCCGGAGTAGACAT CCCCTTTTTTTCAGCTTGTCATT AAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATTGGAGTTATATGTCAATGGGCAGGCTAGGACTGTTG CAGAACATCAATGCAACTTGTGAATTATTTTGTGTTATAAGTTGATTCTCCTTGGTCC                                                                                                             ]
[-] EMBL CB966142             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGTAGAGCAATTGCAAG ACAACTCGGTTGAAATCCCTCCTGCTGAACCTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCACCACTTTGGTTTCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACATTTGGTTATTTAATCCCTTCTTGCAGTCTTGTG AATAGTGA GGTGT GTGCTTCAT GGA AAGTTGATTCGCTCAAAGTACCG TGGATTTGTCATTTCCGGAGTAGACAT CCCCTTTTTTTCAGCTTGTCATT AAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATTGGAGTTATATGTCAATGGGCAGGCTAGGACTGTTG CAGAACATCAATGCAACTTGTGAATTATTTTGTGTTATAAGTTGATTCTCCTTGGTC                                                                                                              ]
[+] EMBL AU108237             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cCCCTTCTTGCAGTCTTGTGAAATAGTGAGGGTGT GTGCTTCATGGGANAAGTTGATTCGCTCAAAGTACCG TGGATTTGTCATTTCCGGAGTAGACAT CCCCTTTTTTTCAGCTTGTCATT AAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATTGGAGTTATATGTCAATGGGCAGGCTAGGACTGTTG CAGAACATCAATGCAACTTGTGAAaaaaa                                                                                                                                          ]
[+] EMBL BI809606             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTGTGGTGCTTCAT GGA AAGTTGATTCGCTCCAAGTACCGCTGGATTTGTCATTTCCGGAGTAGACATCCCCCTTTTGTTCAGCTTGTCCTTGAAGCATTCCCTTGTATATTGCTTG AAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATTGGAGTTATATGTCCATGGGCCGGCTAGGACTGTTGCCAGAAaaaaaaaa                                                                                                                                                          ]


>consensus_13018#0 CCCCCCAACCTCCCTCTCCCTCTCTACACTACTCGCAGCCGCATCGGCTGCCAGCCAGCC CAGCGCGGTGGTTGTTGGGTGGTTGCCTTCTCCCCTCCCCACCACCACCATCTTCTCACT GATCTCTCCACGCCGATCCATCCATCCACCGATCGCCTCCCCTCTCCCGCACTGATCAGT AGTGGTAGAGTGAGTTGAATCTTGGCCGTGATCGATCTTGCTGGGATCTGATAGGGGTGG GAGTCAGTGGAGGGATGGAGGGGGAGGACGAGGTGAGGGTGAATGGGGCTGTGGAGGTAG CGGAGGTGGTGGCGGAGGGGGATCTCGCCAGTGGGGGGGAGGCGGCGGCGGCGGGTGGAT CTGATCAGGCGGTGGTGGTGGTGGCGATGGCCGCGGAGGGGACGACGGCCAAGAAGGGCG GATCGGGGGGCGCGGCCGCGGCGAGGAAGGCGAAGGTGGCGGCGGCGGTGGCCAACGGCA AGGTGGGGAAGAAGCCCGCGCTGTCGCAGAGCGCGTCGTTCCCGGCGAGAGGGGCGGCTG CCAAGAAGGCGGCGACACCAAAGCAGGCCAAGACGACGGACGGGAAAGGCGCTGTGCCCA ATGGATCGGAGAAGGCGGCTGGGCGAGCCGTGGAGAAGAAGGTGAATTCAGCCCGGACGC CTGCCGCAAGCCGCTCCTTGCCTGTTAAATCTGGATCGGTGGACGCGCCTCCAAATGATG CTTCTCCTGAAACCCAAGAGTCAAACGAGAACACCACAAATGCTTTGGAACAGACTCTGC CAGAGAAAATGGAGGATGATGTGCACTCCACCACATCGAGTACCAATACTCCCCGAGCAG CTGCTCAACGCAAGAATGCTGCTGCTGCTGCTGGTTTTAGTTTCAGGCTGCAGGAGCGTG CTGAGAAGAGGAAGGAGTTCTACCAAAAACTTGAAGAGAAGATCCATGCAAAGGAGCTTG AACAAACAAATTTGCAGGCAAAATCTAAAGAGAGCCAAGAGGCTGAGATCAAATTACTTA GGAAGAGCCTGACATTTAAAGCGACACCCATGCCAAGCTTTTACAAGGAGCAACCTCCTA AAGTTGAGTTGAAAAAGATCCCACCAACACGCGCTAGGTCACCAAAGCTTGGCCGGCACA AGCCAACCAATTCTGCTGCTGCTGCTTCTGTTGATGGTTCTGTATCATGTGAGAGTCCTC GGAGCATAACTAATTTGGCCAAATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTA CTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTG CAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAG CTCCAAGAGCCAAGGTAGAGCAATTGCAAGACAACTCGGTTGAAATCCCTCCTGCTGAAC CTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACC GGGCCACCACTTTGGTTGCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACAT TTGGTTATTTAATCCCTTCTTGCAGTCTTGTGAATAGTGAGGTGTGTGCTTCATGGAAAG TTGATTCGCTCAAAGTACCGTGGATTTGTCATTTCCGGAGTAGACATCCCCTTTTTTTCA GCTTGTCATTAAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTAT TTCTTGTGTATATTGGAGTTATATGTCAATGGGCAGGCTAGGACTGTTGCAGAACATCAA TGCAACTTGTGAATTATTTTGTGTTATAAGTTGATTCTCCTTGGTCCTTGCCCAGTATAT CCTTCTTCACCTGTTGCAGGCTTGCAGCAGTTGGTTTCCAAATGTCCAATGCTGTCTGTT TAAATTGGGAGTTAAAAGATACATGAATCATTAGTC



consensusID : consensus_13018#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1153
fasta sequence
                              [GGTTTTGAATCCCTGAACTGCCTAATGTATTCAAATCATCCATCATAATATGTCTATATGTTTTGACGGAGTAATCACCAAGATTTGTAGTTTGTAAGGTAATTTAATCGGAGTACTGACAAATACTTGGTCTTCTCCATCCAAGCTGTATGCTAGCAGAACCAGCTTTGCCATTTTACAGTAAGCTAGACTATTCATAGTTCAGAACATGATAAACAACTTCTCTGTGGTTTCTTATGTTTTTTTTGGGTGTTCAGTTTCCTTATACATATGCTATCTTTTGTATGGCACTAAGAACCTGTTCCCATTCATATTTATAAAGAAATAATGAAATCAACTCATGTGACTATTTGCAGATCCCACCAACACGCGCNAGGNCACCAAAGCTTGGCCGGNAC-AGCCAACCAATTCTGCTGCTGCTGCTTCTGTTGATGGTTCTGTATCATGTGAGAGTCCTCGGAGCATAACTAATTTGGCCAAATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTACTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTGCAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAGCTCCAAGAGCCAAGGTAGAGCAATTGCAAGACAACTCGGTTGAAATCCCTCCTGCTGAACCTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCACCACTTTGGTTGCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACATTTGGTTATTTAATCCCTTCTTGCAGTCTTGTGAATAGTGAGGTGTGTGCTTCATGGAAAGTTGATTCGCTCAAAGTACCGTGGATTTGTCATTTCCGGAGTAGACATCCCCTTTTTTTCAGCTTGTCATTAAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATAAAAAAAATATGTCAATGGGCAGGCTAGGGCTGTTGCAGAACATCAATGCAACTTGTGAATTATTTTGGGTTAAAAGATAATTTTCCATGGACCCTGCCCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C72665               [GGTTTTGAATCCCTGAACTGCCTAATGTATTCAAATCATCCATCATAATATGTCTATATGTTTTGACGGAGTAATCACCAAGATTTGTAGTTTGTAAGGTAATTTAATCGGAGTACTGACAAATACTTGGTCTTCTCCATCCAAGCTGTATGCTAGCAGAACCAGCTTTGCCATTTTACAGTAAGCTAGACTATTCATAGTTCAGAACATGATAAACAACTTCTCTGTGGTTTCTTATGTTTTTTTTGGGTGTTCAGTTTCCTTATACATATGCTATCTTTTGTATGGCACTAAGAACCTGTTCCCATTCATATTTATAAAGAAATAATGAAATCAACTCATGTGACTATTTGCAGATCCCACCAACACGCGCNAGGNCACCAAAGCTTGGCCGGNAC AGCCAACCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU101156             [                                                                                                                                                                                                                                                                                                                                     TAATGAAATCAACTCATGTGACTATTTGCAGATCCCACCAACACGCGCTAGGTCACCAAAGCTTGGCCGGCACAAGCCAACCAATTCTGCTGCTGCTGCTTCTGTTGATGGTTCTGTATCATGTGAGAGTCCTCGGAGCATAACTAATTTGGCCAAATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTACTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTGCAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAGCTCCAAGAGCCAAGGTAGAGCAATTGCAAGACAACTCGGTTGAAATCCCTCCTGCTGAACCTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCACCACTTTGGTTGCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACATTTGGTTATTTAATCCCTTCTTGCAGTCTTGTGAATAGTGAGGTGTGTGCTTCATGGAAAGTTGATTCGCTCAAAGTACCGTGGATTTGTCATTTCCGGAGTAGACATCCCCTTTTTTTCAGCTTGTCATTAAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATAAAAAAAA                                                                                                                                      ]
[-] EMBL CF310327             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCCATTGCAAGACAACTCGGTTGAAATCCCTCCTGGTGACCCTTTTGGCCCAAAGGGGGTCCCTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCCCCCCTTTGGTTGCTTTGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCCCATTTGGTTATTTAATCCCTTTTTGCAGTTTTGTGAAAAGTGAGGGGTGTGCTTCATGGAAAGTTGATTCGCTCAAAGTACCGTGGATTTGTCATTTCCGGAGTAGACATCCCCTTTTTTTCAGCTTGTCATTAAGCATTCCCTTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTTTTGGGTATATTGGAGTTATATGTCAATGGGCAGGCTAGGGCTGTTGCAGAACATCAATGCAACTTGTGAATTATTTTGGGTTAAAAGATAATTTTCCATGGACCCTGCCCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13018#1 GGTTTTGAATCCCTGAACTGCCTAATGTATTCAAATCATCCATCATAATATGTCTATATG TTTTGACGGAGTAATCACCAAGATTTGTAGTTTGTAAGGTAATTTAATCGGAGTACTGAC AAATACTTGGTCTTCTCCATCCAAGCTGTATGCTAGCAGAACCAGCTTTGCCATTTTACA GTAAGCTAGACTATTCATAGTTCAGAACATGATAAACAACTTCTCTGTGGTTTCTTATGT TTTTTTTGGGTGTTCAGTTTCCTTATACATATGCTATCTTTTGTATGGCACTAAGAACCT GTTCCCATTCATATTTATAAAGAAATAATGAAATCAACTCATGTGACTATTTGCAGATCC CACCAACACGCGCNAGGNCACCAAAGCTTGGCCGGNACAGCCAACCAATTCTGCTGCTGC TGCTTCTGTTGATGGTTCTGTATCATGTGAGAGTCCTCGGAGCATAACTAATTTGGCCAA ATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTACTGCCAGAAAGCCTGCTCAAAG ATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTGCAAAGACCGAGACAAAACCCCT TGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAGCTCCAAGAGCCAAGGTAGAGCA ATTGCAAGACAACTCGGTTGAAATCCCTCCTGCTGAACCTTCTGGCCCAGAGGGGCTCAC TGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACCGGGCCACCACTTTGGTTGCTTC GAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACATTTGGTTATTTAATCCCTTCTTG CAGTCTTGTGAATAGTGAGGTGTGTGCTTCATGGAAAGTTGATTCGCTCAAAGTACCGTG GATTTGTCATTTCCGGAGTAGACATCCCCTTTTTTTCAGCTTGTCATTAAGCATTCCATT GTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTATTTCTTGTGTATATAAAAAAAAT ATGTCAATGGGCAGGCTAGGGCTGTTGCAGAACATCAATGCAACTTGTGAATTATTTTGG GTTAAAAGATAATTTTCCATGGACCCTGCCCAGTAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13018#0      CCCCCCAACCTCCCTCTCCCTCTCTACACTACTCGCAGCCGCATCGGCTGCCAGCCAGCC 60
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      CAGCGCGGTGGTTGTTGGGTGGTTGCCTTCTCCCCTCCCCACCACCACCATCTTCTCACT 120
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      GATCTCTCCACGCCGATCCATCCATCCACCGATCGCCTCCCCTCTCCCGCACTGATCAGT 180
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      AGTGGTAGAGTGAGTTGAATCTTGGCCGTGATCGATCTTGCTGGGATCTGATAGGGGTGG 240
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      GAGTCAGTGGAGGGATGGAGGGGGAGGACGAGGTGAGGGTGAATGGGGCTGTGGAGGTAG 300
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      CGGAGGTGGTGGCGGAGGGGGATCTCGCCAGTGGGGGGGAGGCGGCGGCGGCGGGTGGAT 360
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      CTGATCAGGCGGTGGTGGTGGTGGCGATGGCCGCGGAGGGGACGACGGCCAAGAAGGGCG 420
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      GATCGGGGGGCGCGGCCGCGGCGAGGAAGGCGAAGGTGGCGGCGGCGGTGGCCAACGGCA 480
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      AGGTGGGGAAGAAGCCCGCGCTGTCGCAGAGCGCGTCGTTCCCGGCGAGAGGGGCGGCTG 540
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      CCAAGAAGGCGGCGACACCAAAGCAGGCCAAGACGACGGACGGGAAAGGCGCTGTGCCCA 600
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      ATGGATCGGAGAAGGCGGCTGGGCGAGCCGTGGAGAAGAAGGTGAATTCAGCCCGGACGC 660
consensus_13018#1      ------------------------------------------------------------
                                                                                   

consensus_13018#0      CTGCCGCAAGCCGCTCCTTGCCTGTTAAATCTGGATCGGTGGACGCGCCTCCAAATGATG 720
consensus_13018#1      ----------------------------------------GGTTTTGAATCCC--TGAAC 18
                                                               **    *  ***   ***  

consensus_13018#0      CTTCTCCTGAAACCCAAGAGTCAAACGAGAACACCACAAATGCTTTGGAACAGACTCTGC 780
consensus_13018#1      TGCCTAATGTATTCAAATCATCCATCATAATATGTCTATATGTTTTGACGGAGTAATCAC 78
                          **  ** *  * **   ** * *   *       * *** ****    **      *

consensus_13018#0      CAGAGAAAATGGAGGATGATGTGCACTCCACCACATCGAGTACCAATACTCCCCGAGCAG 840
consensus_13018#1      CAAGATTTGTAGTTTGTAAGGTA-ATTTAATCG----GAGTACTGACAAATACTTGGT-- 131
                       **       * *    * * **  * *  * *     ******  * *    *   *   

consensus_13018#0      CTGCTCAACGCAAGAATGCTGCTGCTGCTGCTGGTTTTAGTTTCAGGCTGCAGGAGCGTG 900
consensus_13018#1      CTTCTCCATCCAAGCTGTATGCTAGCAGAACCAGCTTTG---CCATTTTACAGTAA---G 185
                       ** *** *  ****     ****       *  * ***     **   * *** *    *

consensus_13018#0      CTGAGAAGAGGAAGGAGTTCTACCAAAAACTTGAAGAGAAGATCCATGCAAAGGAGCTTG 960
consensus_13018#1      CT-AGACTATTCAT-AGTTC-----AGAACATGATAAACAACTTC-TCTGTGGTTTCTTA 237
                       ** ***  *   *  *****     * *** ***  *  *  * * *     *   *** 

consensus_13018#0      AACAAACAAATTTGCAGGCAAAATCTAAAGAGAGCCAAGAGGCTGAGATCAAATTACTTA 1020
consensus_13018#1      TGT---TTTTTTTGGGTGTTCAGTTTCCTTATACATATGCTATCTTTTGTATGGCACT-- 292
                                 ****   *   * * *    * *   * *           *    ***  

consensus_13018#0      GGAAGAGCCTGACATTTAAAGCGACACCCATGCCAAGCTTTTACAAGGAGCAACCTCCTA 1080
consensus_13018#1      --AAGAACCTG---TTCCCATTCATATTTATAAAGAA-----ATAATGA--AATCAACTC 340
                         **** ****   **   *   * *   **    *      * ** **  ** *  ** 

consensus_13018#0      AAGTTGAGTTGAAAAAGATCCCACCAACACGCGCTAGGTCACCAAAGCTTGGCCGGCACA 1140
consensus_13018#1      ATGT-GACTATTTGCAGATCCCACCAACACGCGCNAGGNCACCAAAGCTTGGCCGGNACA 399
                       * ** ** *      ******************* *** ***************** ***

consensus_13018#0      AGCCAACCAATTCTGCTGCTGCTGCTTCTGTTGATGGTTCTGTATCATGTGAGAGTCCTC 1200
consensus_13018#1      -GCCAACCAATTCTGCTGCTGCTGCTTCTGTTGATGGTTCTGTATCATGTGAGAGTCCTC 458
                        ***********************************************************

consensus_13018#0      GGAGCATAACTAATTTGGCCAAATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTA 1260
consensus_13018#1      GGAGCATAACTAATTTGGCCAAATTGACCGAAAGCACAGAAAATAACAAACCTCATGCTA 518
                       ************************************************************

consensus_13018#0      CTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTG 1320
consensus_13018#1      CTGCCAGAAAGCCTGCTCAAAGATCAGTCACAAAAATTCCTTCCCAAGCATCTGCCACTG 578
                       ************************************************************

consensus_13018#0      CAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAG 1380
consensus_13018#1      CAAAGACCGAGACAAAACCCCTTGTGACAAAGCAGAAAACCTCAAACACAAAACCAAAAG 638
                       ************************************************************

consensus_13018#0      CTCCAAGAGCCAAGGTAGAGCAATTGCAAGACAACTCGGTTGAAATCCCTCCTGCTGAAC 1440
consensus_13018#1      CTCCAAGAGCCAAGGTAGAGCAATTGCAAGACAACTCGGTTGAAATCCCTCCTGCTGAAC 698
                       ************************************************************

consensus_13018#0      CTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACC 1500
consensus_13018#1      CTTCTGGCCCAGAGGGGCTCACTGTTGAACATGGTGTTGAGGATGCAACAGGGCCAGACC 758
                       ************************************************************

consensus_13018#0      GGGCCACCACTTTGGTTGCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACAT 1560
consensus_13018#1      GGGCCACCACTTTGGTTGCTTCGAATGAAGTTCCAGTCCAAGGTTGATTCGATTGCACAT 818
                       ************************************************************

consensus_13018#0      TTGGTTATTTAATCCCTTCTTGCAGTCTTGTGAATAGTGAGGTGTGTGCTTCATGGAAAG 1620
consensus_13018#1      TTGGTTATTTAATCCCTTCTTGCAGTCTTGTGAATAGTGAGGTGTGTGCTTCATGGAAAG 878
                       ************************************************************

consensus_13018#0      TTGATTCGCTCAAAGTACCGTGGATTTGTCATTTCCGGAGTAGACATCCCCTTTTTTTCA 1680
consensus_13018#1      TTGATTCGCTCAAAGTACCGTGGATTTGTCATTTCCGGAGTAGACATCCCCTTTTTTTCA 938
                       ************************************************************

consensus_13018#0      GCTTGTCATTAAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTAT 1740
consensus_13018#1      GCTTGTCATTAAGCATTCCATTGTATATTGCTTGAAAATTTGTTCATGTTAAAATTTTAT 998
                       ************************************************************

consensus_13018#0      TTCTTGTGTATATTGGAGTTATATGTCAATGGGCAGGCTAGGACTGTTGCAGAACATCAA 1800
consensus_13018#1      TTCTTGTGTATATAAAAAAAATATGTCAATGGGCAGGCTAGGGCTGTTGCAGAACATCAA 1058
                       *************   *   ********************** *****************

consensus_13018#0      TGCAACTTGTGAATTATTTTGTGTTATAAGTTGATTCTCCTTGGTCCTTGCCCAGTATAT 1860
consensus_13018#1      TGCAACTTGTGAATTATTTTGGGTTAAAAGATAATTTTCCATGGACCCTGCCCAGTAAAA 1118
                       ********************* **** *** * *** *** *** ** ********* * 

consensus_13018#0      CCTTCTTCACCTGTTGCAGGCTTGCAGCAGTTGGTTTCCAAATGTCCAATGCTGTCTGTT 1920
consensus_13018#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------------- 1153
                               *        *       *  *                               

consensus_13018#0      TAAATTGGGAGTTAAAAGATACATGAATCATTAGTC 1956
consensus_13018#1      ------------------------------------
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)