cluster # 13019

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Oryza sativa
cluster # 13019 cluster # 13019 Sequences # 12 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13019#0 length = 2126 sequences # 11

consensus_13019#1 length = 354 sequences # 1

consensusID : consensus_13019#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 2126
fasta sequence

                              [GCCATCCAGCCACAGCATCGTCGCCCACTCTCCACCGAGAGAAGTCCAAATCCTGGACGCTCCGCGAAAACCCTAGGAACAGCACGCACGCTGTCCCCAAGCACCACCAGCGCCTCCACGCCACGCGCTTGCCTTTGCCTTTGCTCCAGCTCGCGAGACGCCGGGGATGGAGCACGACGCGCACGCCCCGCCGCCTGCCGCGCAGGAGCTCGGCGACGCCTCCGCCTCCGCCTCCGTCGTCGACGACTGGGCGCGCGACGAGGACACCGAGCCGATGGCCGTGGATCCCCACCACGCCGCCGCCGCCGCCGCCACCGCCACTGAGGACGGCGAGGGCGTGGCGGATGCCGCTCCTCCCGCGGCCCCGGCTGAAGATGTTACAGAAATTCAATCATCACTACAGTCCTTGGAGTTGAAGACGAATGCTGCTGCACATGAGGATGCTCAAGAGGTAGTAGAGGAGGAAAAGGAAACAAAGCGGCATTTGAATGTGGTTTTCATTGGTCATGTTGATGCTGGAAAATCAACTGCCGGAGGGCAAATACTTTTCTTGAGTGGTCAAGTCGATGACAGGACCATCCAGAAGTATGAAAAAGAAGCAAAAGATAAAAGCCGAGAAAGCTGGTACATGGCTTACATTATGGACACAAATGAGGAAGAGCGGCTAAAGGGGAAAACTGTTGAAGTTGGTAGAGCCCACTTTGAGACAGAAACTACAAGATTCACTATTTTGGATGCACCGGGTCATAAAAGTTATGTTCCAAATATGATAAGTGGTGCATCTCAAGCAGACATCGGTGTTCTGGTTATATCTGCCCGAAAAGGTGAATTTGAAACTGGTTACGAAAAAGGAGGACAGACTCGTGAACATGTACTGCTTGCAAAAACTTTAGGTGTTGCTAAGTTGATAGTTGTCATCAATAAGATGGATGAACCAACTGTAAAATGGTCTAAAGAAAGGTATGATGAAATTGAGTCAAAGATGGTTCCTTTTCTCAGATCTTCAGGGTACAATGTCAAAAAAGATGTTCA-CTTTTTGCCAATATCTGGTCTTTTGGGAAGCAATATGAAGACCAGGATGGATAAAAGCATTTGTAGTTGGTGGGATGGTCCATGTCTTTTTGAAGTCCTGGATTGTATTGAAGTTCCTTTGCGTGACCCCAAAGGTCCAGTCAGGATGCCAATAATTGATAAGTATAAAGATATGGGCACTGTAGTGATGGGAAAAATAGAATCTGGGACCATCAGAGAGGGTGACAGTTTGTTGGTCATGCCAAACAAGACTAACGTGAAAGTCATTGGCATAAGTTTGGATGAGCACAAGGTACGCCGTGCTGGACCCGCTGAGAATGTCCGTGTCAAATTGTCTGGGATTGAAGACGAGGATATTATGGCTGGTTTTGTGCTCTCAAGCATTGGTAATCCTGTTGGTGCTGTCACTGAATTTAATGCTCAGTTGCAGATTCTAGAGTTGCTTGACAATGCTATTTTCACAGCTGGCTACAAGGCAGTGTTGCATATCCACTCTGTTGTTGAAGAGTGTGAGATTGTTGATCTTATAGAGGAAATTGATATGAAGAAAAAGAAAGAAGCTGATCCAAAGAAGAAAAAACCAAAGAGGAAGCCTCTTTTTGTGAAGAATGGTGCGGTTGTAGTTTGCCGCATTCAGGTGAATAATTTGATTTGTATAGAGAACTTCTCTGATTTTCCTCAGCTTGGAAGGTTTACACTTCGAACAGAAGGTAAGACGGTGGCTGTA-GGGAAGGTTGTTGCTATTCCACCAGCTGGCAGCCCAACATTTTCAGCTTAAGTCAATTTTGAACAGGATGGATGTCTCTTGAGAGCTTCTGGAAGCAATGACATTGCTTGAGCATACATTTTTTCCGGCCCGGCTTGAAAATCATCAATCATTTAGGCATAGCTGTTATTATTAAGATGGGTTGCATAATTTATAGCTCTTGTTACATGTTTGTGAGGTTGTAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCAATTTGAATACCAGTGTTGCAAAGGTTTTTCGTGTGCACAATCCTTTGCCCCTCCCGGGCATCCGAACAAACAAAATTTTGATATGCCCACCT--ACCATTTTGGTTCTTG]

[+] EMBL AK063713             [GCCATCCAGCCACAGCATCGTCGCCCACTCTCCACCGAGAGAAGTCCAAATCCTGGACGCTCCGCGAAAACCCTAGGAACAGCACGCACGCTGTCCCCAAGCACCACCAGCGCCTCCACGCCACGCGCTTGCCTTTGCCTTTGCTCCAGCTCGCGAGACGCCGGGGATGGAGCACGACGCGCACGCCCCGCCGCCTGCCGCGCAGGAGCTCGGCGACGCCTCCGCCTCCGCCTCCGTCGTCGACGACTGGGCGCGCGACGAGGACACCGAGCCGATGGCCGTGGATCCCCACCACGCCGCCGCCGCCGCCGCCACCGCCACTGAGGACGGCGAGGGCGTGGCGGATGCCGCTCCTCCCGCGGCCCCGGCTGAAGATGTTACAGAAATTCAATCATCACTACAGTCCTTGGAGTTGAAGACGAATGCTGCTGCACATGAGGATGCTCAAGAGGTAGTAGAGGAGGAAAAGGAAACAAAGCGGCATTTGAATGTGGTTTTCATTGGTCATGTTGATGCTGGAAAATCAACTGCCGGAGGGCAAATACTTTTCTTGAGTGGTCAAGTCGATGACAGGACCATCCAGAAGTATGAAAAAGAAGCAAAAGATAAAAGCCGAGAAAGCTGGTACATGGCTTACATTATGGACACAAATGAGGAAGAGCGGCTAAAGGGGAAAACTGTTGAAGTTGGTAGAGCCCACTTTGAGACAGAAACTACAAGATTCACTATTTTGGATGCACCGGGTCATAAAAGTTATGTTCCAAATATGATAAGTGGTGCATCTCAAGCAGACATCGGTGTTCTGGTTATATCTGCCCGAAAAGGTGAATTTGAAACTGGTTACGAAAAAGGAGGACAGACTCGTGAACATGTACTGCTTGCAAAAACTTTAGGTGTTGCTAAGTTGATAGTTGTCATCAATAAGATGGATGAACCAACTGTAAAATGGTCTAAAGAAAGGTATGATGAAATTGAGTCAAAGATGGTTCCTTTTCTCAGATCTTCAGGGTACAATGTCAAAAAAGATGTTCA CTTTTTGCCAATATCTGGTCTTTTGGGAAGCAATATGAAGACCAGGATGGATAAAAGCATTTGTAGTTGGTGGGATGGTCCATGTCTTTTTGAAGTCCTGGATTGTATTGAAGTTCCTTTGCGTGACCCCAAAGGTCCAGTCAGGATGCCAATAATTGATAAGTATAAAGATATGGGCACTGTAGTGATGGGAAAAATAGAATCTGGGACCATCAGAGAGGGTGACAGTTTGTTGGTCATGCCAAACAAGACTAACGTGAAAGTCATTGGCATAAGTTTGGATGAGCACAAGGTACGCCGTGCTGGACCCGCTGAGAATGTCCGTGTCAAATTGTCTGGGATTGAAGACGAGGATATTATGGCTGGTTTTGTGCTCTCAAGCATTGGTAATCCTGTTGGTGCTGTCACTGAATTTAATGCTCAGTTGCAGATTCTAGAGTTGCTTGACAATGCTATTTTCACAGCTGGCTACAAGGCAGTGTTGCATATCCACTCTGTTGTTGAAGAGTGTGAGATTGTTGATCTTATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB633041             [                              TCCACCGAGAGAAGTCCAAATCCTGGACGCTCCGCGAAAACCCTAGGAACAGCACGCACGCTGTCCCCAAGCACCACCAGCGCCTCCACGCCACGCGCTTGCCTTTGCCTTTGCTCCAGCTCGCGAGACGCCGGGGATGGAGCACGACGCGCACGCCCCGCCGCCTGCCGCGCAGGAGCTCGGCGACGCCTCCGCCTCCGCCTCCGTCGTCGACGACTGGGCGCGCGACGAGGACACCGAGCCGATGGCCGTGGATCCCCACCACGCCGCCGCCGCCGCCGCCACCGCCACTGAGGACGGCGAGGGCGTGGCGGATGCCGCTCCTCCCGCGGCCCCGGCTGAAGATGTTACAGAAATTCAATCATCACTACAGTCCTTGGAGTTGAAGACGAATGCTGCTGCACATGAGGATGCTCAAGAGGTAGTAGAGGAGGAAAAGGAAACAAAGCGGCATTTGAATGTGGTTTTCATTGGTCATGTTGATGCTGGAAAATCAACTGCCGGAGGGCAAATACTTTTCTTGAGTGGTCAAGTCGATGACAGGACCATCCAGAAGTATGAAAAAGAAGCAAAAGATAAAAGCCGAGAAAGCTGGTACATGGCTTACATTATGGACACAAATGAGGAAGAGCGGCTAAAGGGGAAAACTGTTGAAGTTGGTAGAGCCCACTTTGAGACAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK107968             [                                          AGTCCAAATCCTGGACGCTCCGCGAAAACCCTAGGAACAGCACGCACGCTGTCCCCAAGCACCACCAGCGCCTCCACGCCACGCGCTTGCCTTTGCCTTTGCTCCAGCTCGCGAGACGCCGGGGATGGAGCACGACGCGCACGCCCCGCCGCCTGCCGCGCAGGAGCTCGGCGACGCCTCCGCCTCCGCCTCCGTCGTCGACGACTGGGCGCGCGACGAGGACACCGAGCCGATGGCCGTGGATCCCCACCACGCCGCCGCCGCCGCCGCCACCGCCACTGAGGACGGCGAGGGCGTGGCGGATGCCGCTCCTCCCGCGGCCCCGGCTGAAGATGTTACAGAAATTCAATCATCACTACAGTCCTTGGAGTTGAAGACGAATGCTGCTGCACATGAGGATGCTCAAGAGGTAGTAGAGGAGGAAAAGGAAACAAAGCGGCATTTGAATGTGGTTTTCATTGGTCATGTTGATGCTGGAAAATCAACTGCCGGAGGGCAAATACTTTTCTTGAGTGGTCAAGTCGATGACAGGACCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK105823             [                                                                                                                                                                                                                                                                                                                                                                                                                                           GCTGCACATGAGGATGCTCAAGAGGTAGTAGAGGAGGAAAAGGAAACAAAGCGGCATTTGAATGTGGTTTTCATTGGTCATGTTGATGCTGGAAAATCAACTGCCGGAGGGCAAATACTTTTCTTGAGTGGTCAAGTCGATGACAGGACCATCCAGAAGTATGAAAAAGAAGCAAAAGATAAAAGCCGAGAAAGCTGGTACATGGCTTACATTATGGACACAAATGAGGAAGAGCGGCTAAAGGGGAAAACTGTTGAAGTTGGTAGAGCCCACTTTGAGACAGAAACTACAAGATTCACTATTTTGGATGCACCGGGTCATAAAAGTTATGTTCCAAATATGATAAGTGGTGCATCTCAGGCAGACATCGGTGTTCTGGTTATATCTGCCCGAAAAGGTGAATTTGAAACTGGTTACGAAAAAGGAGGACAGACTCGTGAACATGTACTGCTTGCAAAAACTTTAGGTGTTGCTAAGTTGATAGTTGTCATCAATAAGATGGATGAACCAACTGTAAAATGGTCTAAAGAAAGGTATGATGAAATTGAGTCAAAGATGGTTCCTTTTCTCAGATCTTCAGGGTACAATGTCAAAAAAGATGTTCA CTTTTTGCCAATATCTGGTCTTTTGGGAAGCAATATGAAGACCAGGATGGATAAAAGCATTTGTAGTTGGTGGGATGGTCCATGTCTTTTTGAAGTCCTGGATTGTATTGAAGTTCCTTTGCGTGACCCCAAAGGTCCAGTCAGGATGCCAATAATTGATAAGTATAAAGATATGGGCACTGTAGTGATGGGAAAAATAGAATCTGGGACCATCAGAGAGGGTGACAGTTTGTTGGTCATGCCAAACAAGACTAACGTGAAAGTCATTGGCATAAGTTTGGATGAGCACAAGGTACGCCGTGCTGGACCCGCTGAGAATGTCCGTGTCAAATTGTCTGGGATTGAAGACGAGGATATTATGGCTGGTTTTGTGCTCTCAAGCATTGGTAATCCTGTTGGTGCTGTCACTGAATTTAATGCTCAGTTGCAGATTCTAGAGTTGCTTGACAATGCTATTTTCACAGCTGGCTACAAGGCAGTGTTGCATATCCACTCTGTTGTTGAAGAGTGTGAGATTGTTGATCTTATAGAGGAAATTGATATGAAGAAAAAGAAAGAAGCTGATCCAAAGAAGAAAAAACCAAAGCGGAAGCCTCTTTTTGTGAAGAATGGTGCGGTTGTAGTTTGCCGCATTCAGGTGAATAATTTGATTTGTATAGAGAACTTCTCTGATTTTCCTCAGCTTGGAAGGTTTACACTTCGAACAGAAGGTAAGACGGTGGCTGTA GGGAAGGTTGTTGCTATTCCACCAGCTGGCAGCCCAACATTTTCAGCTTAAGTCAATTTTGAACAGGATGGATGTCTCTTGAGAGCTTCTGGAAGCAATGACATTGCTTGAGCATACATTTTTTCCGGCCCGGCTTGAAAATCATCAATCATTTAGGCATAGCTGTTATTATTAAGATGGGTTGCATAATTTATAGCTCTTGTTACATGTTTGTGAGGTTGTAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCAATTTGAATACCAGTGTTGCAAAGGTTTT                                                                                  ]
[+] EMBL CB618178             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 tgaTTCACCTCTTTGCCAATATCTGGTCTTTTGGGAAGCAATATGAAGACCATGATGGATAAAAGCATTTGTAGTTGGTGGGATGGTCCATGTCTTTTTGAAGTCCTGGATCGCATTGAAGTTCCTTTGCGTGACCCCAAAGGTCCTGTCAGGATGCCAATAATTGATAAGTATAAAGATATGGGCACTGTAGTGATGGGAAAAATAGAATCTGGGACCATCAAAGAGGGTGACAGTTTGTTGGTCATGCCAAACAAGACTAACGTGAAAGTCATTGGCATAAGTTTGGATGAGCACAAGGTATGCCGTGCTGGACCCGCTGAGAATGTCCGTGTCAAATTGTCTGGGATTGAAGACTAGGATATTATGGCTGGTTTTGTGCTCTCAAGCATTGGTAATCCTGTTGGTGCTGTCACTGAATTTAATGCTCAGTTGCAGATTCTAGAGTTGCTTGACAATGCTATTTTCACAGCTGGCTACAAGGCAGTGTTGCATATCCACTCTGTTGTTGAAGAGTGTGAGATTGTTGATCTTATAGAGGAAATTGATATGAAGAAAAAGAAAGAAGCTGATCCATAGAAGATAAATCCAAAGAGGAAGCCTCTTTTTGTGAAGAATGGTGCGGTTGTAGTTTGCCGCATTCAGGTGAATAATTTGATTTGTATAGAGAACTTCTCTGATTTTCCTCAGCTTGGAAGGTTTACACTTCGAACAGAATGTAA                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB618179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAAGACTAACGTGAAAGTCATTGGCATAAGTTTGGATGAGCACAAGGTATGCCGTGCTGGACCCGCTGAGAATGTCCGTGTCAAATTGTCTGGGATTGAAGACGAGGATATTATGGCTGGTTTTGTGCTCTCAAGCATTGGTAATCCTGTTGGTGCTGTCACTGAATTTAATGCTCAGTTGCAGATTCTAGAGTTGCTTGACAATGCTATTTTCACAGCTGGCTACAAGGCAGTGTTGCATATCCACTCTGTTGTTGAAGAGTGTGAGATTGTTGATCTTATAGAGGAAATTGATATGAAGAAAAAGAAAGAAGCTGATCCAAAGAAGAAAAAACCAAAGAGGAAGCCTCTTTTTGTGAAGAATGGTGCGGTTGTAGTTTGCCGCATTCAGGTGAATAATTTGATTTGTATAGAGAACTTCTCTGATTTTCCTCAGCTTGGAAGGTTTACACTTCGAACAGAAGGTAAGACGGTGGCTGTA GGGAAGGTTGTTGCTATTCCACCAGCTGGCAGCCCAACATTTTCAGCTTAAGTCAATTTTGAACAGGATGGATGTCTCTTGAGAGCTTCTGGAAGCAATGACATTGCTTGAGCATACATTTTTTCCGGCCCGGCTTGAAAATCATCAATCATTTAGGCATAGCTGTTATTATTAAGATGGGTTGCATAATTTATAGCTCTTGTTACATGTTTGTGAGGTTGTAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCAATTTGAATACCAGTGTTGCAAAGGTTTTT                                                                                 ]
[-] EMBL CB633042             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCATAAGTTTGGATGAGCACAAGGTATGCCGTGCTGGACCCGCTGAGAATGTCCGTGTCAAATTGTCTGGGATTGAAGACGAGGATATTATGGCTGGTTTTGTGCTCTCAAGCATTGGTAATCCTGTTGGTGCTGTCACTGAATTTAATGCTCAGTTGCAGATTCTAGAGTTGCTTGACAATGCTATTTTCACAGCTGGCTACAAGGCAGTGTTGCATATCCACTCTGTTGTTGAAGAGTGTGAGATTGTTGATCTTATAGAGGAAATTGATATGAAGAAAAAGAAAGAAGCTGATCCAAAGAAGAAAAAACCAAAGAGGAAGCCTCTTTTTGTGAAGAATGGTGCGGTTGTAGTTTGCCGCATTCAGGTGAATAATTTGATTTGTATAGAGAACTTCTCTGATTTTCCTCAGCTTGGAAGGTTTACACTTCGAACAGAAGGTAAGACGGTGGCTGTA GGGAAGGTTGTTGCTATTCCACCAGCTGGCAGCCCAACATTTTCAGCTTAAGTCAATTTTGAACAGGATGGATGTCTCTTGAGAGCTTCTGGAAGCAATGACATTGCTTGAGCATACATTTTTTCCGGCCCGGCTTGAAAATCATCAATCATTTAGGCATAGCTGTTATTATTAAGATGGGTTGCATAATTTATAGCTCTTGTTACATGTTTGTGAGGTTGTAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCAATTTGAATACCAGTGTTGCAAAGGTTTTTCGTGTGCACAATCCTTTGCCATTCCCGGGCATCCGAACAAACAAAATGTTGATATGCCCACCTGAACCATTTTGGTTCTTG]
[+] EMBL CA999106             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGTTTGGATGAGCACAAGGTACGCCGTGCTGGACCCGCTGAGAATGTCCGTGTCAAATTGTCTGGGATTGAAGACGAGGATATTATGGCTGGTTTTGTGCTCTCAAGCATTGGTAATCCTGTTGGTGCTGTCACTGAATTTAATGCTCAGTTGCAGATTCTAGAGTTGCTTGACAATGCTATTTTCACAGCTGGCTACAAGGCAGTGTTGCATATCCACTCTGTTGTTGAAGAGTGTGAGATTGTTGATCTTATAGAGGAAATTGATATGAAGAAAAAGAAAGAAGCTGATCCAAAGAAGAAAAAACCAAAGCGGAAGCCTCTTTTTGTGAAGAATGGTGCGGTTGTAGTTTGCCGCATTCAGGTGAATAATTTGATTTGTATAGAGAACTTCTCTGATTTTCCTCAGCTTGGAAGGTTTACACTTCGAACAGAAGGTAAGACGGTGGCTGTAGGGGAAGGTTGTTGCTATTCCACCAGCTGGCAGCCCAACATTTTCAGCTTAAGTCAATTTTGAACAGGATGGATGTCTCTTGAGAGCTTCTGGAAGCAATGACATTGCTTGAGCATACATTTTTTCCGGCCCGGCTTGAAA                                                                                                                                                                                                                                     ]
[+] EMBL CB000894             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGTTTGGATGAGCACAAGGTACGCCGTGCTGGACCCGCTGAGAATGTCCGTGTCAAATTGTCTGGGATTGAAGACGAGGATATTATGGCTGGTTTTGTGCTCTCAAGCATTGGTAATCCTGTTGGTGCTGTCACTGAATTTAATGCTCAGTTGCAGATTCTAGAGTTGCTTGACAATGCTATTTTCACAGCTGGCTACAAGGCAGTGTTGCATATCCACTCTGTTGTTGAAGAGTGTGAGATTGTTGATCTTATAGAGGAAATTGATATGAAGAAAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB966899             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCCAAGAGGAAGCCTCTTTTTGTGAAGAATGGTGCGGTTGTAGTTTGCCGCATTCAGGTGAATAATTTGATTTGTATAGAGAACTTCTCTGATTTTCCTCAGCTTGGAAGGTTTACACTTCGAACAGAAGGTAAGACGGTGGCTGTA GGGAAGGTTGTTGCTATTCCACCAGCTGGCAGCCCAACATTTTCAGCTTAAGTCAATTTTGAACAGGATGGATGTCTCTTGAGAGCTTCTGGAAGCAATGACATTGCTTGAGCATACATTTTTTCCGGCCCGGCTTGAAAATCATCAATCATTTAGGCATAGCTGTTTTTATTAAGATGGGTTGCATAATTTATAGCTCTTGTTACATGTTTGTGAGGTTGTAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCAATTTGAATACCAGTGTTGCAAAGGTTTTTCGTGTGCACAATCCTTTGCCCCTCCCGGGCATCCGAACAAAC AAATTTTGATATGCCCACCT  ACCATTTT        ]
[+] EMBL CA765938             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGACATTGCTTGAGCATACATTTTTTCCGGCCCGGCTTGAAAATCATCAATCATTTAGGCATAGCTGTTATTATTAAGATGGGTTGCATAATTTATAGCTCTTGTTACATGTTTGTGAGGTTGTAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCAATTTGAATACCAGTGTTGCAAAGGTTTTTCGTGTGCACAATCCTTTGCCCCTCCCGGGCATCCGAACAAACAAAATTTTGATATGCCCACCT  ACCATTTTGGT     ]




>consensus_13019#0
GCCATCCAGCCACAGCATCGTCGCCCACTCTCCACCGAGAGAAGTCCAAATCCTGGACGC
TCCGCGAAAACCCTAGGAACAGCACGCACGCTGTCCCCAAGCACCACCAGCGCCTCCACG
CCACGCGCTTGCCTTTGCCTTTGCTCCAGCTCGCGAGACGCCGGGGATGGAGCACGACGC
GCACGCCCCGCCGCCTGCCGCGCAGGAGCTCGGCGACGCCTCCGCCTCCGCCTCCGTCGT
CGACGACTGGGCGCGCGACGAGGACACCGAGCCGATGGCCGTGGATCCCCACCACGCCGC
CGCCGCCGCCGCCACCGCCACTGAGGACGGCGAGGGCGTGGCGGATGCCGCTCCTCCCGC
GGCCCCGGCTGAAGATGTTACAGAAATTCAATCATCACTACAGTCCTTGGAGTTGAAGAC
GAATGCTGCTGCACATGAGGATGCTCAAGAGGTAGTAGAGGAGGAAAAGGAAACAAAGCG
GCATTTGAATGTGGTTTTCATTGGTCATGTTGATGCTGGAAAATCAACTGCCGGAGGGCA
AATACTTTTCTTGAGTGGTCAAGTCGATGACAGGACCATCCAGAAGTATGAAAAAGAAGC
AAAAGATAAAAGCCGAGAAAGCTGGTACATGGCTTACATTATGGACACAAATGAGGAAGA
GCGGCTAAAGGGGAAAACTGTTGAAGTTGGTAGAGCCCACTTTGAGACAGAAACTACAAG
ATTCACTATTTTGGATGCACCGGGTCATAAAAGTTATGTTCCAAATATGATAAGTGGTGC
ATCTCAAGCAGACATCGGTGTTCTGGTTATATCTGCCCGAAAAGGTGAATTTGAAACTGG
TTACGAAAAAGGAGGACAGACTCGTGAACATGTACTGCTTGCAAAAACTTTAGGTGTTGC
TAAGTTGATAGTTGTCATCAATAAGATGGATGAACCAACTGTAAAATGGTCTAAAGAAAG
GTATGATGAAATTGAGTCAAAGATGGTTCCTTTTCTCAGATCTTCAGGGTACAATGTCAA
AAAAGATGTTCACTTTTTGCCAATATCTGGTCTTTTGGGAAGCAATATGAAGACCAGGAT
GGATAAAAGCATTTGTAGTTGGTGGGATGGTCCATGTCTTTTTGAAGTCCTGGATTGTAT
TGAAGTTCCTTTGCGTGACCCCAAAGGTCCAGTCAGGATGCCAATAATTGATAAGTATAA
AGATATGGGCACTGTAGTGATGGGAAAAATAGAATCTGGGACCATCAGAGAGGGTGACAG
TTTGTTGGTCATGCCAAACAAGACTAACGTGAAAGTCATTGGCATAAGTTTGGATGAGCA
CAAGGTACGCCGTGCTGGACCCGCTGAGAATGTCCGTGTCAAATTGTCTGGGATTGAAGA
CGAGGATATTATGGCTGGTTTTGTGCTCTCAAGCATTGGTAATCCTGTTGGTGCTGTCAC
TGAATTTAATGCTCAGTTGCAGATTCTAGAGTTGCTTGACAATGCTATTTTCACAGCTGG
CTACAAGGCAGTGTTGCATATCCACTCTGTTGTTGAAGAGTGTGAGATTGTTGATCTTAT
AGAGGAAATTGATATGAAGAAAAAGAAAGAAGCTGATCCAAAGAAGAAAAAACCAAAGAG
GAAGCCTCTTTTTGTGAAGAATGGTGCGGTTGTAGTTTGCCGCATTCAGGTGAATAATTT
GATTTGTATAGAGAACTTCTCTGATTTTCCTCAGCTTGGAAGGTTTACACTTCGAACAGA
AGGTAAGACGGTGGCTGTAGGGAAGGTTGTTGCTATTCCACCAGCTGGCAGCCCAACATT
TTCAGCTTAAGTCAATTTTGAACAGGATGGATGTCTCTTGAGAGCTTCTGGAAGCAATGA
CATTGCTTGAGCATACATTTTTTCCGGCCCGGCTTGAAAATCATCAATCATTTAGGCATA
GCTGTTATTATTAAGATGGGTTGCATAATTTATAGCTCTTGTTACATGTTTGTGAGGTTG
TAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCAATTTGAATACCAGTGTTGCAAA
GGTTTTTCGTGTGCACAATCCTTTGCCCCTCCCGGGCATCCGAACAAACAAAATTTTGAT
ATGCCCACCTACCATTTTGGTTCTTG

consensusID : consensus_13019#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 354
fasta sequence

                              [TTGAAAATCATCAATCATTTAGGCATAGCTGTTATTATTAAGATGGTTGCATAATTTATAGCCTCTTGTTACATGTTTGTGAGGTTTGTAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCATTTGAATACCAGTGTTGCCAAGGTTTTTCGTGTGCACATCCTTTGCCATTCCCGGGCATCCGAACAACAAATTTTGATATGCCCCCCCAACCCCCCCCTTTTTGGGGGAAAAAAAAAAAAAACCCCCCCCCCCCCATTTTTGGGTTTCCTTTGTTATGTTTTTTCCGAAGGGGTGCCACCCTGGTGGTATTTTATTATACCGCCCAGCACTGTTTATCCAAAAAAAAA]

[+] EMBL BI811804             [TTGAAAATCATCAATCATTTAGGCATAGCTGTTATTATTAAGATGGTTGCATAATTTATAGCCTCTTGTTACATGTTTGTGAGGTTTGTAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCATTTGAATACCAGTGTTGCCAAGGTTTTTCGTGTGCACATCCTTTGCCATTCCCGGGCATCCGAACAACAAATTTTGATATGCCCCCCCAACCCCCCCCTTTTTGGGGGAAAAAAAAAAAAAACCCCCCCCCCCCCATTTTTGGGTTTCCTTTGTTATGTTTTTTCCGAAGGGGTGCCACCCTGGTGGTATTTTATTATACCGCCCAGCACTGTTTATCCAAAAAAAAA]




>consensus_13019#1
TTGAAAATCATCAATCATTTAGGCATAGCTGTTATTATTAAGATGGTTGCATAATTTATA
GCCTCTTGTTACATGTTTGTGAGGTTTGTAAAATCAGTATGGGTATATCCCTGCCCTAAC
CTTCCATTTGAATACCAGTGTTGCCAAGGTTTTTCGTGTGCACATCCTTTGCCATTCCCG
GGCATCCGAACAACAAATTTTGATATGCCCCCCCAACCCCCCCCTTTTTGGGGGAAAAAA
AAAAAAAACCCCCCCCCCCCCATTTTTGGGTTTCCTTTGTTATGTTTTTTCCGAAGGGGT
GCCACCCTGGTGGTATTTTATTATACCGCCCAGCACTGTTTATCCAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13019#0      GCCATCCAGCCACAGCATCGTCGCCCACTCTCCACCGAGAGAAGTCCAAATCCTGGACGC 60
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      TCCGCGAAAACCCTAGGAACAGCACGCACGCTGTCCCCAAGCACCACCAGCGCCTCCACG 120
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      CCACGCGCTTGCCTTTGCCTTTGCTCCAGCTCGCGAGACGCCGGGGATGGAGCACGACGC 180
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      GCACGCCCCGCCGCCTGCCGCGCAGGAGCTCGGCGACGCCTCCGCCTCCGCCTCCGTCGT 240
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      CGACGACTGGGCGCGCGACGAGGACACCGAGCCGATGGCCGTGGATCCCCACCACGCCGC 300
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      CGCCGCCGCCGCCACCGCCACTGAGGACGGCGAGGGCGTGGCGGATGCCGCTCCTCCCGC 360
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      GGCCCCGGCTGAAGATGTTACAGAAATTCAATCATCACTACAGTCCTTGGAGTTGAAGAC 420
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      GAATGCTGCTGCACATGAGGATGCTCAAGAGGTAGTAGAGGAGGAAAAGGAAACAAAGCG 480
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      GCATTTGAATGTGGTTTTCATTGGTCATGTTGATGCTGGAAAATCAACTGCCGGAGGGCA 540
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      AATACTTTTCTTGAGTGGTCAAGTCGATGACAGGACCATCCAGAAGTATGAAAAAGAAGC 600
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      AAAAGATAAAAGCCGAGAAAGCTGGTACATGGCTTACATTATGGACACAAATGAGGAAGA 660
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      GCGGCTAAAGGGGAAAACTGTTGAAGTTGGTAGAGCCCACTTTGAGACAGAAACTACAAG 720
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      ATTCACTATTTTGGATGCACCGGGTCATAAAAGTTATGTTCCAAATATGATAAGTGGTGC 780
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      ATCTCAAGCAGACATCGGTGTTCTGGTTATATCTGCCCGAAAAGGTGAATTTGAAACTGG 840
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      TTACGAAAAAGGAGGACAGACTCGTGAACATGTACTGCTTGCAAAAACTTTAGGTGTTGC 900
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      TAAGTTGATAGTTGTCATCAATAAGATGGATGAACCAACTGTAAAATGGTCTAAAGAAAG 960
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      GTATGATGAAATTGAGTCAAAGATGGTTCCTTTTCTCAGATCTTCAGGGTACAATGTCAA 1020
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      AAAAGATGTTCACTTTTTGCCAATATCTGGTCTTTTGGGAAGCAATATGAAGACCAGGAT 1080
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      GGATAAAAGCATTTGTAGTTGGTGGGATGGTCCATGTCTTTTTGAAGTCCTGGATTGTAT 1140
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      TGAAGTTCCTTTGCGTGACCCCAAAGGTCCAGTCAGGATGCCAATAATTGATAAGTATAA 1200
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      AGATATGGGCACTGTAGTGATGGGAAAAATAGAATCTGGGACCATCAGAGAGGGTGACAG 1260
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      TTTGTTGGTCATGCCAAACAAGACTAACGTGAAAGTCATTGGCATAAGTTTGGATGAGCA 1320
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      CAAGGTACGCCGTGCTGGACCCGCTGAGAATGTCCGTGTCAAATTGTCTGGGATTGAAGA 1380
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      CGAGGATATTATGGCTGGTTTTGTGCTCTCAAGCATTGGTAATCCTGTTGGTGCTGTCAC 1440
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      TGAATTTAATGCTCAGTTGCAGATTCTAGAGTTGCTTGACAATGCTATTTTCACAGCTGG 1500
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      CTACAAGGCAGTGTTGCATATCCACTCTGTTGTTGAAGAGTGTGAGATTGTTGATCTTAT 1560
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      AGAGGAAATTGATATGAAGAAAAAGAAAGAAGCTGATCCAAAGAAGAAAAAACCAAAGAG 1620
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      GAAGCCTCTTTTTGTGAAGAATGGTGCGGTTGTAGTTTGCCGCATTCAGGTGAATAATTT 1680
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      GATTTGTATAGAGAACTTCTCTGATTTTCCTCAGCTTGGAAGGTTTACACTTCGAACAGA 1740
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      AGGTAAGACGGTGGCTGTAGGGAAGGTTGTTGCTATTCCACCAGCTGGCAGCCCAACATT 1800
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      TTCAGCTTAAGTCAATTTTGAACAGGATGGATGTCTCTTGAGAGCTTCTGGAAGCAATGA 1860
consensus_13019#1      ------------------------------------------------------------
                                                                                   

consensus_13019#0      CATTGCTTGAGCATACATTTTTTCCGGCCCGGCTTGAAAATCATCAATCATTTAGGCATA 1920
consensus_13019#1      ---------------------------------TTGAAAATCATCAATCATTTAGGCATA 27
                                                        ***************************

consensus_13019#0      GCTGTTATTATTAAGATGGGTTGCATAATTTATAGC-TCTTGTTACATGTTTGTGAGGTT 1979
consensus_13019#1      GCTGTTATTATTAAGATGG-TTGCATAATTTATAGCCTCTTGTTACATGTTTGTGAGGTT 86
                       ******************* **************** ***********************

consensus_13019#0      -GTAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCAATTTGAATACCAGTGTTGCA 2038
consensus_13019#1      TGTAAAATCAGTATGGGTATATCCCTGCCCTAACCTTCCA-TTTGAATACCAGTGTTGCC 145
                        *************************************** ****************** 

consensus_13019#0      AAGGTTTTTCGTGTGCACAATCCTTTGCCCCTCCCGGGCATCCGAACAAACAAAATTTTG 2098
consensus_13019#1      AAGGTTTTTCGTGTGCACA-TCCTTTGCCATTCCCGGGCATCCGAACAA--CAAATTTTG 202
                       ******************* *********  ******************   ********

consensus_13019#0      ATATGCCCACCTACCATTTTGGTTCTTG-------------------------------- 2126
consensus_13019#1      ATATGCCCCCCCAACCCCCCCCTTTTTGGGGGAAAAAAAAAAAAAACCCCCCCCCCCCCA 262
                       ******** ** * *       ** ***                                

consensus_13019#0      ------------------------------------------------------------
consensus_13019#1      TTTTTGGGTTTCCTTTGTTATGTTTTTTCCGAAGGGGTGCCACCCTGGTGGTATTTTATT 322
                                                                                   

consensus_13019#0      --------------------------------
consensus_13019#1      ATACCGCCCAGCACTGTTTATCCAAAAAAAAA 354