cluster # 13026

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Oryza sativa
cluster # 13026 cluster # 13026 Sequences # 12 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13026#0 length = 1871 sequences # 7

consensus_13026#1 length = 703 sequences # 5

consensusID : consensus_13026#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1871
fasta sequence

                              [TTGGATCTCCCCTCCTCGCCGTCACTCGCTGCCGGATAAGGAACCAATGCTTCGCACCGGCGGCGGAGCGCGAGCCACGGCGGCGGCGCAGCTGCTCTCCTCCTCCTCCTCGCCGCCGCCGCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTACCCGCTCTACTACGACCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATCCTCCGCCGCCGATGACCGCCACACCCGGCCCACCGACGACCACCTCGACCGCGCCAAGCGCCGGTACCTCCGGAAGCGCCGCAGCCGCCTCCTCCCCGACCCCGACGCCACCACCGCCAAGCCCTCCTCCTCCTCCTCGTCGGAGTTCGTGGAGCTGAAGCCGGAGGTGGTGGACTTCCCGCGGCTGCACGCGCGGGAGGAGGCGCTCTACTTCCACGACGCGTTCGCGCTACCCTGGGAGAAGGACAAGCACTACCGCATGCTCTACCGCCTCGAGAAGAAGTACTTCCCGGACCAATCCCTCGACAACGCCTTCGTCCCCGCCGACGCCTCGCCGCCTTCCTCCGACGCCGCCGACAAGGGCCTCGTCTTCTTCGACGACGACGATAACAACAAGGAGGCGGAGGTGAAGAAGAAGAAGGATGGCGAGGATCGAGGGGAGGTGTTGGAGAGGAAGGTGGAGGATTTCTTCAGGTCATTGAAGAAAGGCCCTGGCCATGGCGAGGCTAACGTGATGAAGGCGAAGAAGAAGGAGCCTCCGCAGGTGAGGCACGAGGCGGATGAATGGCCGCAGCCGCATCTCGCGAGCAGGAGAACGGAGCTGCCGCCGAGGTGGAACGGCCCGACCGGGACAGTCGTGCTCATCGACAAGCCCAAAGGCTGGACTTCATTTACTGTTTGTGGAAAGCTGCGGCGATTAGTGAATGTGCAAAAGGTCGGGCATGCTGGTACTCTGGATCCAATGGCAACTGGACTGTTGATTGTTTGTGTGGGTAAAGCAACCAAAGTTGTTGATAGATATCAAGGAATGGTTAAAGGCTATAGTGGTGTTTTTCGACTTGGAGAAGCTACATCAACCTGGGATGCAGATTCACCAGTTATCCAGAGAGAACCAT-GGGAACACATTAAAGATGAAGATATTAGAAAGGTAGCAGCATCATTCAGGGGCGAGATATGGCAAGTTCCTCCAATGTTTTCTGCCATTAAGGTTGGTGGTGAAAAAATGTATGACAAAGCAAGGAGGGGTGAAACAGTAGAGCTTTCACCAAGGCGAATATCAATACACCAGTTTGATATTGAGCGCAGTTTAGAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCCCTCTGTGCAGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGC-TTGGAGTTTTGCTGAGCTGGAGGAACAAATCACAAAGGGATATTTATGATTACTCACCATGCCATTTGGCAAAATTGCAGCCATCGTTGGGTTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTTCCCTGGTAGGCAATTGGTCGTTGAGTACTGAGAAGCTATTAACCAACAGTAACGCTCAACCCAGAGATCAGCACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGTCCCTGGACACTACGGATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGCATGCATCCTAAATTTTGATGTGGAACATTGTCAACATTACGATGAAATAGAATGTGGTTATACTTGATTACGAGCATTAAAGGGGAT]

[+] EMBL AK065542             [TTGGATCTCCCCTCCTCGCCGTCACTCGCTGCCGGATAAGGAACCAATGCTTCGCACCGGCGGCGGAGCGCGAGCCACGGCGGCGGCGCAGCTGCTCTCCTCCTCCTCCTCGCCGCCGCCGCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTACCCGCTCTACTACGACCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATCCTCCGCCGCCGATGACCGCCACACCCGGCCCACCGACGACCACCTCGACCGCGCCAAGCGCCGGTACCTCCGGAAGCGCCGCAGCCGCCTCCTCCCCGACCCCGACGCCACCACCGCCAAGCCCTCCTCCTCCTCCTCGTCGGAGTTCGTGGAGCTGAAGCCGGAGGTGGTGGACTTCCCGCGGCTGCACGCGCGGGAGGAGGCGCTCTACTTCCACGACGCGTTCGCGCTACCCTGGGAGAAGGACAAGCACTACCGCATGCTCTACCGCCTCGAGAAGAAGTACTTCCCGGACCAATCCCTCGACAACGCCTTCGTCCCCGCCGACGCCTCGCCGCCTTCCTCCGACGCCGCCGACAAGGGCCTCGTCTTCTTCGACGACGACGATAACAACAAGGAGGCGGAGGTGAAGAAGAAGAAGGATGGCGAGGATCGAGGGGAGGTGTTGGAGAGGAAGGTGGAGGATTTCTTCAGGTCATTGAAGAAAGGCCCTGGCCATGGCGAGGCTAACGTGATGAAGGCGAAGAAGAAGGAGCCTCCGCAGGTGAGGCACGAGGCGGATGAATGGCCGCAGCCGCATCTCGCGAGCAGGAGAACGGAGCTGCCGCCGAGGTGGAACGGCCCGACCGGGACAGTCGTGCTCATCGACAAGCCCAAAGGCTGGACTTCATTTACTGTTTGTGGAAAGCTGCGGCGATTAGTGAATGTGCAAAAGGTCGGGCATGCTGGTACTCTGGATCCAATGGCAACTGGACTGTTGATTGTTTGTGTGGGTAAAGCAACCAAAGTTGTTGATAGATATCAAGGAATGGTTAAAGGCTATAGTGGTGTTTTTCGACTTGGAGAAGCTACATCAACCTGGGATGCAGATTCACCAGTTGTCCAGAGAGAACCAT GGGAACACATTAAAGATGAAGATATTAGAAAGGTAGCAGCATCATTCAGGGGCGAGATATGGCAAGTTCCTCCAATGTTTTCTGCCATTAAGGTTGGTGGTGAAAAAATGTATGACAAAGCAAGGAGGGGTGAAACAGTAGAGCTTTCACCAAGGCGAATATCAATACACCAGTTTGATATTGAGCGCAGTTTAGAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCCCTCTGTGCAGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGC TTGGAGTTTTGCTGAGCTGGAGGAACAAATCACAAAGGGATATTTATGATTACTCACCATGCCATTTGGCAAAATTGCAGCCATCGTTGGGTTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTTCCCTGGTAGGCAATTGGTCGTTGAGTACTGAGAAGCTATTAACCAACAGTAACGCTCAACCCAGAGATCAGCACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGTCCCTGGACACTACGGATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGCATGCATCCTAAATTTTGATGTGGAACATTGTCAACATTACGATGAAATAGAATGTGGTTATA                         ]
[+] EMBL C72019               [                 GCCGTCACTCGCTGCCGGATAAGGAACCAATGCTTCGCACCGGCGGCGGAG GCGAGCCACGGCGGCGGCGCA NTGCTCTCCTCCTCCTCCTCGCCGCCGCCGCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTACCCGCTCTACTACGACCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATNCTCCGCCGCCGATGACCGCCACACCCGGCCCACCGACGACCANCTCGACCGCGGCAAG GNCGGTAACTCCGGAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB685207             [                                                GCTCCTTACCGGCGGCGGAGCGCGAGCCACGGCGGCGGCGCAGCTGCTCTCCTCCTCCTCCTCGCCGCCGCCGCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTACCCGCTCTACTACGACCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATCCTCCGCCGCCGATGACCGCCACACCCGGCCCACCGACGACCACCTCGACCGCGCCAAGCGCCGGTACCTCCGGAAGCGCCGCAGCCGCCTCCTCCCCGACCCCGACGCCACCACCGCCAAGCCCTCCTCCTCCTCCTCGTCGGAGTTCGTGGAGCTGAAGCCGGAGGTGGTGGACTTCCCGCGGCTGCACGCGCGGGAGGAGGCGCTCTACTTCCACGACGCGTTCGCGCTACCCTGGGAGAAGGACAAGCACTACCGCATGCTCTACCGCCTCGAGAAGAAGTACTTCCCGGACCAATCCCTCGACAACGCCTTCGTCCCCGCCGACGCCTCGCCGCCTTCCTCCGACGCCGCCGACAAGGGCCTCGTCTTCTTCGACGACGACGATAACAACAAGGAGGCGGAGGTGAAGAAGAAGAAGGATGGCGAGGATCGAGGGGAGGTGTTGGAGAGGAAGGTGGAGGATTTCTTCAGGTCATTGAAGAAAGGCCCTGGCCATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB640379             [                                                     GCACCGGCGGCGGAGCGCGAGCCACGGCGGCGGCGCAGCTGCTCTCCTCCTCCTCCTCGCCGCCGCCGCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTACCCGCTCTACTACGACCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATCCTCCGCCGCCGATGACCGCCACACCCGGCCCACCGACGACCACCTCGACCGCGCCAAGCGCCGGTACCTCCGGAAGCGCCGCAGCCGCCTCCTCCCCGACCCCGACGCCACCACCGCCAAGCCCTCCTCCTCCTCCTCGTCGGAGTTCGTGGAGCTGAAGCCGGAGGTGGTGGACTTCCCGCGGCTGCACGCGCGGGAGGAGGCGCTCTACTTNCACGACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA752865             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCCAATGGCAACTGGACTGTTGATTGTTTGTGTGGGTAAAGCAACCAAAGTTGTTGATAGATATCAAGGAATGGTTAAAGGCTATAGTGGTGTTTTTCGACTTGGAGAAGCTACATCAACCTGGGATGCAGATTCACCAGTTATCCAGAGAGAACCAT GGGAACACATTAAAGATGAAGATATTAGAAAGGTAGCAGCATCATTCAGGGGCGAGATATGGCAAGTTCCTCCAATGTTTTCTGCCATTAAGGTTGGTGGTGAAAAAATGTATGACAAAGCAAGGAGGGGTGAAACAGTAGAGCTTTCACCAAGGCGAATATCAATACACCAGTTTGATATTGAGCGCAGTTTAGAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCCCTCTGTGCAGATTTGGGGAAAGCACTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGCTTTGGAGTTTTGCTGAGCTGGAGGAACAAATCACAAAGGGATATTTATGATTACTCACCATGCCATTTGGCAAAATTGCAGCCATCGg                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CA752950             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCT GGATGCAG TTCCCCAGTTAT CAGAGAG ACCATGGGGACCCCTTTAAAGATGAAGATATTAGAAAGGTAGCAGCATCATTCA GGGCGAGATATGGCAAGTTCCTCCAATGTTTTCTGCCATTAAGGTTGGTGGTGAAAAAATGTATGACAAAGCAAGGAGGGGTGAACCAGTAGAGCTTTCACCAAGGCGAATATCAATACACCAGTTTGATATTGAGCGCAGTTTAGAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCCCTCTGTGCAGATTTGGGGAAAGCACTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGC TTGGAGTTTTGCTGAGCTGGAGGAACAAATCACAAAGGGATATTTATGATTACTCACCATGCCATTTGGCAAAATTGCAGCCATCGTTGGGTTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTTCCCTGGTAGGCAATTGGT                                                                                                                                                                                                                                                         ]
[-] EMBL CB685208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAGAACCAT GGGAACACATTAAAGATGAAGATATTAGAAAGGTAGCAGCATCATTCAGGGGCGAGATATGGCAAGTTCCTCCAATGTTTTCTGCCATTAAGGTTGGTGGTGAAAAAATGTATGACAAAGCAAGGAGGGGTGAAACAGTAGAGCTTTCACCAAGGCGAATATCAATACACCAGTTTGATATTGAGCGCAGTTTAGAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCCCTCTGTGCAGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTTATTGCCTTGCGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGC TTGGAGTTTTGCTGAGCTGGAGGAACAAATCACAAAGGGATATTTATGATTACTCACCATGCCATTTGGCAAAATTGCAGCCATCGTTGGGTTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTTCCCTGGTAGGCAATTGGTTGTTGAGTACTGAGAAGCTATTAACCAACAGTAACGCTCAACCCAGAGATCAGCACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGTCCCTGGACACTACGGATGTAGCAGCTTTAGATATTGCAATGATGCATACCTGATGTAGCATGCATCCTAAATTTTGATGTGGAACATTGTCCCCATTAAAAGGAAATAGAATGTGGTTATACTTGATTACGAGCATTAAAGGGGAT]




>consensus_13026#0
TTGGATCTCCCCTCCTCGCCGTCACTCGCTGCCGGATAAGGAACCAATGCTTCGCACCGG
CGGCGGAGCGCGAGCCACGGCGGCGGCGCAGCTGCTCTCCTCCTCCTCCTCGCCGCCGCC
GCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTACCCGCTCTACTACGA
CCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATCCTCCGCCGCCGATGACCG
CCACACCCGGCCCACCGACGACCACCTCGACCGCGCCAAGCGCCGGTACCTCCGGAAGCG
CCGCAGCCGCCTCCTCCCCGACCCCGACGCCACCACCGCCAAGCCCTCCTCCTCCTCCTC
GTCGGAGTTCGTGGAGCTGAAGCCGGAGGTGGTGGACTTCCCGCGGCTGCACGCGCGGGA
GGAGGCGCTCTACTTCCACGACGCGTTCGCGCTACCCTGGGAGAAGGACAAGCACTACCG
CATGCTCTACCGCCTCGAGAAGAAGTACTTCCCGGACCAATCCCTCGACAACGCCTTCGT
CCCCGCCGACGCCTCGCCGCCTTCCTCCGACGCCGCCGACAAGGGCCTCGTCTTCTTCGA
CGACGACGATAACAACAAGGAGGCGGAGGTGAAGAAGAAGAAGGATGGCGAGGATCGAGG
GGAGGTGTTGGAGAGGAAGGTGGAGGATTTCTTCAGGTCATTGAAGAAAGGCCCTGGCCA
TGGCGAGGCTAACGTGATGAAGGCGAAGAAGAAGGAGCCTCCGCAGGTGAGGCACGAGGC
GGATGAATGGCCGCAGCCGCATCTCGCGAGCAGGAGAACGGAGCTGCCGCCGAGGTGGAA
CGGCCCGACCGGGACAGTCGTGCTCATCGACAAGCCCAAAGGCTGGACTTCATTTACTGT
TTGTGGAAAGCTGCGGCGATTAGTGAATGTGCAAAAGGTCGGGCATGCTGGTACTCTGGA
TCCAATGGCAACTGGACTGTTGATTGTTTGTGTGGGTAAAGCAACCAAAGTTGTTGATAG
ATATCAAGGAATGGTTAAAGGCTATAGTGGTGTTTTTCGACTTGGAGAAGCTACATCAAC
CTGGGATGCAGATTCACCAGTTATCCAGAGAGAACCATGGGAACACATTAAAGATGAAGA
TATTAGAAAGGTAGCAGCATCATTCAGGGGCGAGATATGGCAAGTTCCTCCAATGTTTTC
TGCCATTAAGGTTGGTGGTGAAAAAATGTATGACAAAGCAAGGAGGGGTGAAACAGTAGA
GCTTTCACCAAGGCGAATATCAATACACCAGTTTGATATTGAGCGCAGTTTAGAAGACAG
ACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCCCTCTGTGC
AGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGACTCAAT
TGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAGGAACAAATCACAAA
GGGATATTTATGATTACTCACCATGCCATTTGGCAAAATTGCAGCCATCGTTGGGTTCAG
TTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTTCCCTGGTAGGCAATTG
GTCGTTGAGTACTGAGAAGCTATTAACCAACAGTAACGCTCAACCCAGAGATCAGCACTT
AATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGTCCCTGGACACTACGG
ATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGCATGCATCCTAAATTTT
GATGTGGAACATTGTCAACATTACGATGAAATAGAATGTGGTTATACTTGATTACGAGCA
TTAAAGGGGAT

consensusID : consensus_13026#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 703
fasta sequence

                              [CCAATGTTTTCTGCCCATTAAGGTTGGTGGTTGAAAAATGTATGACCAAAGCAAGGAGGGNTGAACCAGTTAGAGCTTTCACCCAAGGCGAATATCAATACACCAGTTTGATATTGAGCCCCAGTTTAGAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTC-GATCCCTCTGTGCAGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAGGAACAAATCACA-AAGGGATATTTATGATTACTCA-CCATGCCATTTGGCAAAATTGCAGCCATCGTTGGGTTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTTCCCTGGTAGGCAATTGGTCGTTGAGTACTGAGAAGCTATTAACCACCAGTAACGCTCAACCCAGAGATCAGCACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGTCCCTGGACA-CTACGGATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGCATGCATCCTAAATTTTGATGTGGAACA-TTGTCAACATTACGATGAAATAGAATGTGGTTATACTTGATTATGAATTTATGATGAAAAAGAAAAAAAAAAAAAA]

[+] EMBL AU101090             [CCAATGTTTTCTGCCCATTAAGGTTGGTGGTTGAAAAATGTATGACCAAAGCAAGGAGGGNTGAACCAGTTAGAGCTTTCACCCAAGGCGAATATCAATACACCAGTTTGATATTGAGCCCCAGTTTAGAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTC GATCCCTCTGTGCAGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAGGAACAAATCACA AAGGGATATTTATGATTACTCA CCATGCCATTTGGCAAAATTGCAGCCATCGTTGGGTTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTTCCCTGGTAGGCAATTGGTCGTTGAGTACTGAGAAGCTATTAACCAACAGTAACGCTCAACCCAGAGATCAGCACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGTCCCTGGACA CTACGGATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGCATGCATCCTAAATTTTGATGTGGAACA TTGTCAACATTACGATGAAATAGAATGTGGTTATACTTGATTATGAATTTATGATGAAATAGAAAAAAAAAAAAAA]
[-] EMBL BI305442             [                                                                                                                                            AATTTGATATTTCGAGTTATTTGCTCAAAAGGAACAAATATTC GATCCCTCTGTGCAAATTTGGGGAAAGCGCTCGGAAACTGTGTTCATTTAACTCCCTTGGGGAAAGACTCAATTGGCGACTTTTCAGTCAATAATGCTTGGAGTTTTGTTGAGCTGGAGGACCAAATCCCA AAGGGATATTTATGATTACTCC CCATGCCATTTGGCAAAATTGCACCCATCGTTGGGTTCAGTTTGAGTTTCAGCGCTTAGGGAACAATTGCTTTTTTCCAATTTTCCCTGGTAGGCAATTGGTCGTTGAGTACTGAGAAGCTATTAACCACCAGTAACGCTCAACCCAGAGATCAGCCCTTAATTTGACGTTTCAGCCCTTGGGGGAAAGGAATTCATTTTGGGGTCCCTGGACC CTACGGATGTAGCAGCTTTATATATTGCAATGATGCAACCCTGATGTAGCATGCATCCTAAATTTTGATGTGGAACA TTGTCAACATTACGATGAAAAAGAATGTGGTTAAACTTGATTATGAATTTATGATGAAAAAGAAtgt         ]
[+] EMBL BM421509             [                                                                                                                                                                    cCAAAGGGAACATATATTCGGATCCCTCTGTGCAGATTTGGGGAAAGCACTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAGGAACCAATCACACAAGGGATATTTATGATTACTCAGCCATGCCATTTGGCCAAATTGCAGCCATCGTTGGGTTCAGTTTGAGTTTCAGCGCTTAGCGAAC ATTGCTTTCTTCCAATCTTCCCTGGTAGGCAATTGGTCGTTGAGTACTGAGAAGCTATTAACCA CAGTAACGCTCAACCCAGAGATCAGCACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGTCCCTGGACACCTACGGATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGCATGCATCCTAAATTTTGATGTGGAACA TTGTCAACATTACGATGAAATAGAATGTGGTTATACTTGATTATGAATTTATGATGAAAAAaa             ]
[+] EMBL BM421703             [                                                                                                                                                                                                             GGAAAGCACTCGGAAGCTGTGCTCATTTAACT CCTTCCGGAGAGACTCAATTGNCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAGGACCAAATCCCA AAGGGATATTTATGATTACTCA CCATGCCATTTGCCAAAATTNCAGCCATCGTTGGGTTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTC TCCAATCTTCCCTGGTAGCCAATTGGTCGTTGAGTACTGAGAAGCTATTAACCACCAGTAACGCTCAACCCAGAGATCAGCACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGT CCTGGACA TTACGGATGTAGCAGCTTTATATA TCCAATGA GCATACCTGATGTAGCATGCATCCTAAATTTTGATGTGGAACATTTGTCAACATTACGATGAAATAGAATGTGGTTATACTTGATTATGAATTTATGATGAAAAAaa             ]
[+] EMBL BQ906097             [                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGCAATTGGTCGTTGAGTACTGAGAAGCTATTAACCA CAGTAACGCTCAACCCAGAGATCAGCACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGT CCTGGACA CTACGGATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGCATGCATCCTAAATTTTGATGTGGAACA TTGTCAACATTACGNTGCCATAGAATGTGGTTATACTTGATTAaaaa                             ]




>consensus_13026#1
CCAATGTTTTCTGCCCATTAAGGTTGGTGGTTGAAAAATGTATGACCAAAGCAAGGAGGG
NTGAACCAGTTAGAGCTTTCACCCAAGGCGAATATCAATACACCAGTTTGATATTGAGCC
CCAGTTTAGAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATA
TTCGATCCCTCTGTGCAGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTAACTGCCT
TGCGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGG
AGGAACAAATCACAAAGGGATATTTATGATTACTCACCATGCCATTTGGCAAAATTGCAG
CCATCGTTGGGTTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTT
CCCTGGTAGGCAATTGGTCGTTGAGTACTGAGAAGCTATTAACCACCAGTAACGCTCAAC
CCAGAGATCAGCACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTG
TCCCTGGACACTACGGATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGC
ATGCATCCTAAATTTTGATGTGGAACATTGTCAACATTACGATGAAATAGAATGTGGTTA
TACTTGATTATGAATTTATGATGAAAAAGAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13026#0      TTGGATCTCCCCTCCTCGCCGTCACTCGCTGCCGGATAAGGAACCAATGCTTCGCACCGG 60
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      CGGCGGAGCGCGAGCCACGGCGGCGGCGCAGCTGCTCTCCTCCTCCTCCTCGCCGCCGCC 120
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      GCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTACCCGCTCTACTACGA 180
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      CCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATCCTCCGCCGCCGATGACCG 240
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      CCACACCCGGCCCACCGACGACCACCTCGACCGCGCCAAGCGCCGGTACCTCCGGAAGCG 300
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      CCGCAGCCGCCTCCTCCCCGACCCCGACGCCACCACCGCCAAGCCCTCCTCCTCCTCCTC 360
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      GTCGGAGTTCGTGGAGCTGAAGCCGGAGGTGGTGGACTTCCCGCGGCTGCACGCGCGGGA 420
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      GGAGGCGCTCTACTTCCACGACGCGTTCGCGCTACCCTGGGAGAAGGACAAGCACTACCG 480
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      CATGCTCTACCGCCTCGAGAAGAAGTACTTCCCGGACCAATCCCTCGACAACGCCTTCGT 540
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      CCCCGCCGACGCCTCGCCGCCTTCCTCCGACGCCGCCGACAAGGGCCTCGTCTTCTTCGA 600
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      CGACGACGATAACAACAAGGAGGCGGAGGTGAAGAAGAAGAAGGATGGCGAGGATCGAGG 660
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      GGAGGTGTTGGAGAGGAAGGTGGAGGATTTCTTCAGGTCATTGAAGAAAGGCCCTGGCCA 720
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      TGGCGAGGCTAACGTGATGAAGGCGAAGAAGAAGGAGCCTCCGCAGGTGAGGCACGAGGC 780
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      GGATGAATGGCCGCAGCCGCATCTCGCGAGCAGGAGAACGGAGCTGCCGCCGAGGTGGAA 840
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      CGGCCCGACCGGGACAGTCGTGCTCATCGACAAGCCCAAAGGCTGGACTTCATTTACTGT 900
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      TTGTGGAAAGCTGCGGCGATTAGTGAATGTGCAAAAGGTCGGGCATGCTGGTACTCTGGA 960
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      TCCAATGGCAACTGGACTGTTGATTGTTTGTGTGGGTAAAGCAACCAAAGTTGTTGATAG 1020
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      ATATCAAGGAATGGTTAAAGGCTATAGTGGTGTTTTTCGACTTGGAGAAGCTACATCAAC 1080
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      CTGGGATGCAGATTCACCAGTTATCCAGAGAGAACCATGGGAACACATTAAAGATGAAGA 1140
consensus_13026#1      ------------------------------------------------------------
                                                                                   

consensus_13026#0      TATTAGAAAGGTAGCAGCATCATTCAGGGGCGAGATATGGCAAGTTCCTCCAATGTTTTC 1200
consensus_13026#1      -------------------------------------------------CCAATGTTTTC 11
                                                                        ***********

consensus_13026#0      TGCC-ATTAAGGTTGGTGGTGAAAAAATGTATGAC-AAAGCAAGGAGGGGTGAAACAGT- 1257
consensus_13026#1      TGCCCATTAAGGTTGGTGGTTGAAAAATGTATGACCAAAGCAAGGAGGGNTGAACCAGTT 71
                       **** ***************  ************* ************* **** **** 

consensus_13026#0      AGAGCTTTCACC-AAGGCGAATATCAATACACCAGTTTGATATTGAGCGC-AGTTTAGAA 1315
consensus_13026#1      AGAGCTTTCACCCAAGGCGAATATCAATACACCAGTTTGATATTGAGCCCCAGTTTAGAA 131
                       ************ *********************************** * *********

consensus_13026#0      GACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCCCTC 1375
consensus_13026#1      GACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCCCTC 191
                       ************************************************************

consensus_13026#0      TGTGCAGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGAC 1435
consensus_13026#1      TGTGCAGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGAC 251
                       ************************************************************

consensus_13026#0      TCAATTGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAGGAACAAATC 1495
consensus_13026#1      TCAATTGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAGGAACAAATC 311
                       ************************************************************

consensus_13026#0      ACAAAGGGATATTTATGATTACTCACCATGCCATTTGGCAAAATTGCAGCCATCGTTGGG 1555
consensus_13026#1      ACAAAGGGATATTTATGATTACTCACCATGCCATTTGGCAAAATTGCAGCCATCGTTGGG 371
                       ************************************************************

consensus_13026#0      TTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTTCCCTGGTAGGC 1615
consensus_13026#1      TTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTTCCCTGGTAGGC 431
                       ************************************************************

consensus_13026#0      AATTGGTCGTTGAGTACTGAGAAGCTATTAACCAACAGTAACGCTCAACCCAGAGATCAG 1675
consensus_13026#1      AATTGGTCGTTGAGTACTGAGAAGCTATTAACCACCAGTAACGCTCAACCCAGAGATCAG 491
                       ********************************** *************************

consensus_13026#0      CACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGTCCCTGGACAC 1735
consensus_13026#1      CACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGTCCCTGGACAC 551
                       ************************************************************

consensus_13026#0      TACGGATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGCATGCATCCTAA 1795
consensus_13026#1      TACGGATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGCATGCATCCTAA 611
                       ************************************************************

consensus_13026#0      ATTTTGATGTGGAACATTGTCAACATTACGATGAAATAGAATGTGGTTATACTTGATTAC 1855
consensus_13026#1      ATTTTGATGTGGAACATTGTCAACATTACGATGAAATAGAATGTGGTTATACTTGATTAT 671
                       *********************************************************** 

consensus_13026#0      GAGCATTAAAGGGGAT---------------- 1871
consensus_13026#1      GAATTTATGATGAAAAAGAAAAAAAAAAAAAA 703
                       **   *   * *  *