cluster # 13044

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Oryza sativa
cluster # 13044 cluster # 13044 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13044#0 length = 1407 sequences # 8

consensus_13044#1 length = 1091 sequences # 3
consensus_13044#2 length = 602 sequences # 1

consensusID : consensus_13044#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1407
fasta sequence

                              [AGGCCCCTCGTCTCCGAGGGAGGAGGAGGAANAGGACGACCAGAAAACACAACCCGCGTGCGTCCACGAATCCCGGCTCGGGATCTCCGTCCCCCCCCCCCCAGTGACGTCATCGTAATCCGCGGGTCAAAAGCAGCAAGGCGGCGAGCACCGGAGCAAGAAGCGGAGCGAGCAAGGTAGCCGGCGGCATCCGCGTCTCCTTCCAGGGATTCTTGGGGGGCTCCGCTGCTGGTGGTGGTGGGGGAGGGATCGAGAGGATGGCCGTGGAGTCGCCATTCAGGGCGGATGTGTTGAGGGGCAAGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCGCCCGCCACGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCGAGGTCCTCGACAAGGCCGTCGCCGCCCTCCGCTCCCACGGCCTCCGGGCTGTTGGTTTTGAGGGAGATGTGCGCAAGCAGGAAGATGCCGCGAGAGTGGTTGCCGCAACAGTTCAACATTTTGGTAAGCTAGACATTCTTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCCGGAGGATTTGACGCCCAAAGGGTTCAGGACAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAAAGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACATAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGGCGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCAGGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCACCTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTTAAGTTGGGTGAAAAATGGGACATAGCTATGGCTGCACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAATCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTTTCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACGCTCGAGTTAAACATTTGCCAAAGTGGTTCTCATTCATATTGTATCTGGTAATATTGCAATCAAAAATGAATCGCAACCAAAAAAAAAAAA]

[+] EMBL AU067998             [AGGCCCCTCGTCTCCGAGGGAGGAGGAGGAANAGGACGACCAGAAAACACAACCCGCGTGCGTCCACGAATCCCGGCTCGGGATCTCCGTCCCCCCCCCCCCAGTGACGTCATCTTAATCCGCGGGTCAAAAGCAGCAAGGCGGCGAGCACCGGAGCAAGAAGCGGA CNNGCAAGGTAGCCGGCGGCATCCGCGTCTCCTTCCAGGGATTCTTTGGGGGCTCCGCTGCTGGTGGTGGTGGGGGAGGGATCGAGAGGATGGCCGTGGAGTCGCCATTCAGGGCGGATGTGTTGAGGGGCAAGGCGGCGCNGGTCACCGGCCGCGGCTCCGGCATCGGGTTCGAGATCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK073265             [                       AGGAGGAAGAGGACGACCAGAAAACACAACCCGCGTGCGTCCACGAATCCCGGCTCGGGATCTCCGTCCCCCCCCCCCCAGTGACGTCATCGTAATCCGCGGGTCAAAAGCAGCAAGGCGGCGAGCACCGGAGCAAGAAGCGGAGCGAGCAAGGTAGCCGGCGGCATCCGCGTCTCCTTCCAGGGATTCTTGGGGGGCTCCGCTGCTGGTGGTGGTGGGGGAGGGATCGAGAGGATGGCCGTGGAGTCGCCATCCAGGGCGGATGTGTTGAGGGGCAAGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCGCCCGCCACGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCGAGGTCCTCGACAAGGCCGTCGCCGCCCTCCGCTCCCACGGCCTCCGGGCTGTTGGTTTTGAGGGAGATGTGCGCAAGCAGGAAGATGCCGCGAGAGTGGTTGCCGCAACAGTTCAACATTTTGGTAAGCTAGACATTCTTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCCGGAGGATTTGACGCCCAAAGGGTTCAGGACAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAAAGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACATAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGGCGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCAGGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCACCTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTTAAGTTGGGTGAAAAATGGGACATAGCTATGGCTGCACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAATCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTTTCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACGCTCGAGTTAAACATTTGCCAAAGTGGTTCTCATTCATATTGTATCTGGTAA                                       ]
[+] EMBL CB652236             [                                         AGAAAAC CTTCCCGCGTGCGTCCACGAATCCCGGCTCGGGATCTCCGTCCCCCCCCCCCCAGTGACGTCATCGTAATCCGCGGGTCAAAAGCAGCAAGGCGGCGAGCACCGGAGCAAGAAGCGGAGCGAGCAAGGTAGCCGGCGGCATCCGCGTCTCCTTCCAGGGATTCTTGGGGGGCTCCGCTGCTGGTGGTGGTGGGGGAGGGATCGAGAGGATGGCCGTGGAGTCGCCATTCAGGGCGGATGTGTTGAGGGGCAAGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCGCCCGCCACGGAGCGCACGTCGCCATCATGGGCCGCCGCCGCGAGGTCCTCTACAAGGCCGTTTCCGCCCTCCGCTCCCACGGGCTCCGGGCTGCTGGTTTTGAGGGAGATGTGCTCAAGCAGGAAGATGCCCCTAGAGGGGTTGCCGCAACATGGCCACATTTTGGTAAGCTAGACATTCTTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C98897               [                                           AAAACACAACCCGCGTGCGTCCACGAATCCCGGCTCGGGATCTCCGTCCCCCCCCCCCCAGTGACGTCATCGTAATCCGCGGGTCAAAAGCAGCAAGGCGGCGAGCACCGGAGCAAGAAGCGGA CNNGCAAGGTAGCCGGCGGCATCCGCGTCTCCTTCCAGGGATTCTTGGGGGGCTCCGCTGCTGGTGGTGGTGGGGGAGGGATCGAGAGGATGGCCGTGGAGTCGCCATTCAGGGCGGATGTGTTGAGGGGCAAGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCGCCCGCCANGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCGAAGTCCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU174337             [                                                                  CGAATCCCGGCTCGGGATCTCCGTCCCCCCCCCCCCAGTGACGTCATCGTAATCCGCGGGTCAAAAGCAGCAAGGCGGCGAGCACCGGAGCAAGAAGCGGAGCGAGCAAGGTAGCCGGCGGCATCCGCGTCTCCTTCCAGGGATTCTTGGGGGGCTCCGCTGCTGGTGGTGGTGGGGGAGGGATCGAGAGGATGGCCGTGGAGTCGCCATTCAGGGCGGATGTGTTGAGGGGCAAGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGNCCANCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB619580             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCTAGACATTCTTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCCGGAGGATTTGACGCCCAAAGGGTTCAGGACAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAAAGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACATAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGGCGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCAGGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCACCTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTTAAGTTGGGTGAAAAATGGGACATAGCTATGGCTGCACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAATCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTTTCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACAAGGGAGTTAAACATTTGCCAAAGTGGTT                                                              ]
[+] EMBL AU174338             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGACATAGCTATGGCTGCACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAATCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTTTCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACGCTCGAGTTAAACATTTGCCAAAGTGGTTCTCATTCATATTGTATCTGGTAATATTGCAATCAAAAA                        ]
[+] EMBL AU181292             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAATCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTTTCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACGCTCGAGTTAAACATTTGCCAAAGTGGTTCTCATTCATATTGTATCTGGTAATATTGCAATCAACTTTGAATCGCAACCAAAAAAAAAAAA]




>consensus_13044#0
AGGCCCCTCGTCTCCGAGGGAGGAGGAGGAANAGGACGACCAGAAAACACAACCCGCGTG
CGTCCACGAATCCCGGCTCGGGATCTCCGTCCCCCCCCCCCCAGTGACGTCATCGTAATC
CGCGGGTCAAAAGCAGCAAGGCGGCGAGCACCGGAGCAAGAAGCGGAGCGAGCAAGGTAG
CCGGCGGCATCCGCGTCTCCTTCCAGGGATTCTTGGGGGGCTCCGCTGCTGGTGGTGGTG
GGGGAGGGATCGAGAGGATGGCCGTGGAGTCGCCATTCAGGGCGGATGTGTTGAGGGGCA
AGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCG
CCCGCCACGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCGAGGTCCTCGACAAGGCCG
TCGCCGCCCTCCGCTCCCACGGCCTCCGGGCTGTTGGTTTTGAGGGAGATGTGCGCAAGC
AGGAAGATGCCGCGAGAGTGGTTGCCGCAACAGTTCAACATTTTGGTAAGCTAGACATTC
TTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCCGGAGGATTTGACGCCCAAAGGGT
TCAGGACAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAA
AGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACA
TAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGG
CGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCA
GGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCAC
CTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTTAAGTTGGGTGAAAAAT
GGGACATAGCTATGGCTGCACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGA
CTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGG
AAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGC
CATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAA
TCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTT
TCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACGCTC
GAGTTAAACATTTGCCAAAGTGGTTCTCATTCATATTGTATCTGGTAATATTGCAATCAA
AAATGAATCGCAACCAAAAAAAAAAAA

consensusID : consensus_13044#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1091
fasta sequence

                              [GCGCCTTGAAGAGGGGCAAGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCGCCCGCCACGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCGAGGTCCTCGACAAGGCCGTCGCCGCCCTCCGCTCCCACGGCCTCCGGGCTGTTGGTTTTGAGGGAGATGTGCGCAAGCAGGAAGATGCCGCGAGAGTGGTTGCCGCAACAGTTCAACATTTTGGTAAGCTAGACATTCTTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCTTGAGGATTTGACGCCCAAAGGGTTCATGACAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAAAGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACATAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGGCGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCAGGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCACCTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTT-AAGTTGGGTGAAAAATGGGACATAGCTATGG-CTG-CACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAATCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTTTCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACGCTCGAGTTAAACATTTGCCAAAGTGGTTCTCATTCAAAAAAAAAAAAAAAAAAAGG]

[+] EMBL CB619579             [GCGCCTTGAAGAGGGGCAAGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCGCCCGCCACGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCGAGGTCCTCGACAAGGCCGTCGCCGCCCTCCGCTCCCACGGCCTCCGGGCTGTTGGTTTTGAGGGAGATGTGCGCAAGCAGGAAGATGCCGCGAGAGTGGTTGCCGCAACAGTTCAACATTTTGGTAAGCTAGACATTCTTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCTTGAGGATTTGACGCCCAAAGGGTTCATGACAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAAAGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACATAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGGCGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCAGGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCACCTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTT AAGTTGGGTGAAAAATGGGACATAGCTATGG CTG CACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGACTACAGTGGTTGTT                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB652237             [                                                                                                                                                                                                                                                                                                                                 gGACAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAAAGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACATAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGGCGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCAGGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCACCTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTT AAGTTGGGTGAAAAATGGGACATAGCTATGG CTG CACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAATCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTTTCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACGCTCGAGTTAAACATTTGCCAAAGTGGTTCTCATTCAAAAAAAAAAAAAAAAAAAGG]
[+] EMBL C98898               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGGGAAATAATCCCTTTATTTAAAGTGGGNTGAAAAATGGGNCTTAGCTATGGNCTGCCACTTTACCTTGCTTCTGATGCAGG AAATATGT AATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAATCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTTTCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACGCTCGAGTTAAACATTTGCCAAAGTGGTTCTCATTCAAAAA                ]




>consensus_13044#1
GCGCCTTGAAGAGGGGCAAGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCG
AGATCGCCGCCCAGCTCGCCCGCCACGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCG
AGGTCCTCGACAAGGCCGTCGCCGCCCTCCGCTCCCACGGCCTCCGGGCTGTTGGTTTTG
AGGGAGATGTGCGCAAGCAGGAAGATGCCGCGAGAGTGGTTGCCGCAACAGTTCAACATT
TTGGTAAGCTAGACATTCTTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCTTGAGG
ATTTGACGCCCAAAGGGTTCATGACAGTCGTTGACATTGACACAGTGGGTACATACACTA
TGTGCTATGAAGCTCTAAAGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTG
GTGGCGTCATCATCAACATAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTC
ATGTCTCTGCTGCTAAGGCGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGG
GAACAGATTATGACATCAGGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAG
GAATGAGGAAGCTTGCACCTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTAT
TTAAGTTGGGTGAAAAATGGGACATAGCTATGGCTGCACTTTACCTTGCTTCTGATGCAG
GAAAATATGTAAATGGGACTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTC
GCCATATTCCGAAGGAGGAAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGG
CCTCTGGTGTTGGTGTGCCATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCT
CCTACGTGTACTGTAGAATCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTAT
CACTTGTCATCGAAGTTTTCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACA
TTCACCTTGTTCACGCTCGAGTTAAACATTTGCCAAAGTGGTTCTCATTCAAAAAAAAAA
AAAAAAAAAGG

consensusID : consensus_13044#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 602
fasta sequence

                              [TTGGCTCGGAAAGGGGGAACAGATTATCCCATCGGGTCCAAGGGATTTCCACCGGGCCCAATTGAAGCCCCTCCAGGAATGAGGAAGCTTCCCCTGAGGAAATGCCCAGGGGGAGTCGGGAAATAACCCTTTTTTTAAGTGGGGGGAAAAATGGGAAATAGTTAGGGCTGCACTTTCCCTTGCTTGTGACGCGGGAAAATATGTAAAGGGGCCTACAGTGGTTGTTGAGGGAGTTCTTTGTTTAAGTCGCCCTCGCCATATTCCGAGGGGGGAAGTGAGGGAGCTCTCAAAGTTTGTCGAGAAGAAGTTTAGGCCCTCTGGTGTTGGTGTCCCATCAAGCAAATTGTGATGTCCTCTAGGGTTTATATCGCCCTCCTACGTGTCCTGTAGAATCCTTTCCGGAGGAGTCCGGTAGAATCCTGGGATGTTGCTATCACTGGTCATGGAAGTTTTCTAGGATTCTATCTATCAACTCCTGTACCATGTTCAGCCCTTTCCCTTTGTTCCCGCTGGAGTTAACCTTTTCCCAAAGGGGTTCCCATTCATATGGTATCGGGTAATATGCCAATCACCTTTGATTCCCACCCAAAAAAAAAAAAAAA]

[-] EMBL CA755211             [TTGGCTCGGAAAGGGGGAACAGATTATCCCATCGGGTCCAAGGGATTTCCACCGGGCCCAATTGAAGCCCCTCCAGGAATGAGGAAGCTTCCCCTGAGGAAATGCCCAGGGGGAGTCGGGAAATAACCCTTTTTTTAAGTGGGGGGAAAAATGGGAAATAGTTAGGGCTGCACTTTCCCTTGCTTGTGACGCGGGAAAATATGTAAAGGGGCCTACAGTGGTTGTTGAGGGAGTTCTTTGTTTAAGTCGCCCTCGCCATATTCCGAGGGGGGAAGTGAGGGAGCTCTCAAAGTTTGTCGAGAAGAAGTTTAGGCCCTCTGGTGTTGGTGTCCCATCAAGCAAATTGTGATGTCCTCTAGGGTTTATATCGCCCTCCTACGTGTCCTGTAGAATCCTTTCCGGAGGAGTCCGGTAGAATCCTGGGATGTTGCTATCACTGGTCATGGAAGTTTTCTAGGATTCTATCTATCAACTCCTGTACCATGTTCAGCCCTTTCCCTTTGTTCCCGCTGGAGTTAACCTTTTCCCAAAGGGGTTCCCATTCATATGGTATCGGGTAATATGCCAATCACCTTTGATTCCCACCCAAAAAAAAAAAAAAA]




>consensus_13044#2
TTGGCTCGGAAAGGGGGAACAGATTATCCCATCGGGTCCAAGGGATTTCCACCGGGCCCA
ATTGAAGCCCCTCCAGGAATGAGGAAGCTTCCCCTGAGGAAATGCCCAGGGGGAGTCGGG
AAATAACCCTTTTTTTAAGTGGGGGGAAAAATGGGAAATAGTTAGGGCTGCACTTTCCCT
TGCTTGTGACGCGGGAAAATATGTAAAGGGGCCTACAGTGGTTGTTGAGGGAGTTCTTTG
TTTAAGTCGCCCTCGCCATATTCCGAGGGGGGAAGTGAGGGAGCTCTCAAAGTTTGTCGA
GAAGAAGTTTAGGCCCTCTGGTGTTGGTGTCCCATCAAGCAAATTGTGATGTCCTCTAGG
GTTTATATCGCCCTCCTACGTGTCCTGTAGAATCCTTTCCGGAGGAGTCCGGTAGAATCC
TGGGATGTTGCTATCACTGGTCATGGAAGTTTTCTAGGATTCTATCTATCAACTCCTGTA
CCATGTTCAGCCCTTTCCCTTTGTTCCCGCTGGAGTTAACCTTTTCCCAAAGGGGTTCCC
ATTCATATGGTATCGGGTAATATGCCAATCACCTTTGATTCCCACCCAAAAAAAAAAAAA
AA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13044#0      AGGCCCCTCGTCTCCGAGGGAGGAGGAGGAANAGGACGACCAGAAAACACAACCCGCGTG 60
consensus_13044#1      ------------------------------------------------------------
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      CGTCCACGAATCCCGGCTCGGGATCTCCGTCCCCCCCCCCCCAGTGACGTCATCGTAATC 120
consensus_13044#1      ------------------------------------------------------------
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      CGCGGGTCAAAAGCAGCAAGGCGGCGAGCACCGGAGCAAGAAGCGGAGCGAGCAAGGTAG 180
consensus_13044#1      ------------------------------------------------------------
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      CCGGCGGCATCCGCGTCTCCTTCCAGGGATTCTTGGGGGGCTCCGCTGCTGGTGGTGGTG 240
consensus_13044#1      ------------------------------------------------------------
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      GGGGAGGGATCGAGAGGATGGCCGTGGAGTCGCCATTCAGGGCGGATGTGTTGAGGGGCA 300
consensus_13044#1      -----------------------------------------GCGCCT-TGAAGAGGGGCA 18
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      AGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCG 360
consensus_13044#1      AGGCGGCGCTGGTCACCGGCGGCGGCTCCGGCATCGGGTTCGAGATCGCCGCCCAGCTCG 78
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      CCCGCCACGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCGAGGTCCTCGACAAGGCCG 420
consensus_13044#1      CCCGCCACGGCGCGCACGTCGCCATCATGGGCCGCCGCCGCGAGGTCCTCGACAAGGCCG 138
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      TCGCCGCCCTCCGCTCCCACGGCCTCCGGGCTGTTGGTTTTGAGGGAGATGTGCGCAAGC 480
consensus_13044#1      TCGCCGCCCTCCGCTCCCACGGCCTCCGGGCTGTTGGTTTTGAGGGAGATGTGCGCAAGC 198
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      AGGAAGATGCCGCGAGAGTGGTTGCCGCAACAGTTCAACATTTTGGTAAGCTAGACATTC 540
consensus_13044#1      AGGAAGATGCCGCGAGAGTGGTTGCCGCAACAGTTCAACATTTTGGTAAGCTAGACATTC 258
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      TTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCCGGAGGATTTGACGCCCAAAGGGT 600
consensus_13044#1      TTGTCAATGGGGCAGCTGGCAATTTCCTTGCTTCCCTTGAGGATTTGACGCCCAAAGGGT 318
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      TCAGGACAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAA 660
consensus_13044#1      TCATGACAGTCGTTGACATTGACACAGTGGGTACATACACTATGTGCTATGAAGCTCTAA 378
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      AGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACA 720
consensus_13044#1      AGTATCTGAAAAAGGGTGGCCCTGGGAAAGGTCCCTCTACTGGTGGCGTCATCATCAACA 438
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      TAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGG 780
consensus_13044#1      TAAGTGCTACTTTGCATTACACTGCGGCCTGGTACCAAATTCATGTCTCTGCTGCTAAGG 498
consensus_13044#2      ------------------------------------------------------------
                                                                                   

consensus_13044#0      CGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCA 840
consensus_13044#1      CGGGCGTTGATAGTATAACAAGATCATTGGCTCTGGAATGGGGAACAGATTATGACATCA 558
consensus_13044#2      --------------------------TTGGCTCGGAAAGGGGGAACAGATTATCCCATCG 34
                                                 ******* * ** **************  **** 

consensus_13044#0      GGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCAC 900
consensus_13044#1      GGGTCAATGGAATTGCACCAGGGCCAATTGAAGGCACTCCAGGAATGAGGAAGCTTGCAC 618
consensus_13044#2      GGTCCAAGGGATTTCCACCGGGCCCAATTGAAGCCCCTCCAGGAATGAGGAAGCTTCC-C 93
                       **  *** *** ** **** ** ********** * ******************** * *

consensus_13044#0      CTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTTAAGTTGGGTGAAAAAT 960
consensus_13044#1      CTGAGGAAATGGCCAAGGGGAGTCGGGAAATAATGCCTTTATTTAAGTTGGGTGAAAAAT 678
consensus_13044#2      CTGAGGAAATGCCCAGGGGGAGTCGGGAAATAAC-CCTTTTTTTAAGTGGGGGGAAAAAT 152
                       *********** *** *****************  ***** ******* *** *******

consensus_13044#0      GGGACATAGCTATGGCTGCACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGA 1020
consensus_13044#1      GGGACATAGCTATGGCTGCACTTTACCTTGCTTCTGATGCAGGAAAATATGTAAATGGGA 738
consensus_13044#2      GGGAAATAGTTAGGGCTGCACTTTCCCTTGCTTGTGACGCGGGAAAATATGTAAAGGGGC 212
                       **** **** ** *********** ******** *** ** ************** *** 

consensus_13044#0      CTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGG 1080
consensus_13044#1      CTACAGTGGTTGTTGATGGAGGTCTTTGGCTAAGTCGCCCTCGCCATATTCCGAAGGAGG 798
consensus_13044#2      CTACAGTGGTTGTTGAGGGAGTTCTTTGTTTAAGTCGCCCTCGCCATATTCCGAGGGGGG 272
                       **************** **** ******  ************************ ** **

consensus_13044#0      AAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGC 1140
consensus_13044#1      AAGTGAAGGAGCTCTCAAAGGTTGTCGAGAAGAAGGTTAGGGCCTCTGGTGTTGGTGTGC 858
consensus_13044#2      AAGTGAGGGAGCTCTCAAAGTTTGTCGAGAAGAAGTTTAGGCCCTCTGGTGTTGGTGTCC 332
                       ****** ************* ************** ***** **************** *

consensus_13044#0      CATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAA 1200
consensus_13044#1      CATCAAGCAAATTGTGATGTCCTCTATGGTTTATATCGCCCTCCTACGTGTACTGTAGAA 918
consensus_13044#2      CATCAAGCAAATTGTGATGTCCTCTAGGGTTTATATCGCCCTCCTACGTGTCCTGTAGAA 392
                       ************************** ************************ ********

consensus_13044#0      TCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTT 1260
consensus_13044#1      TCCTTTACCGAGGAGTCCCGTAGAATACTTGGATGTTGCTATCACTTGTCATCGAAGTTT 978
consensus_13044#2      TCCTTTCCGGAGGAGTCCGGTAGAATCCTGGGATGTTGCTATCACTGGTCATGGAAGTTT 452
                       ****** * ********* ******* ** **************** ***** *******

consensus_13044#0      TCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACGCTC 1320
consensus_13044#1      TCTATGATTCTATCTATCAACTCCTGTAACATGCTCAGCACATTCACCTTGTTCACGCTC 1038
consensus_13044#2      TCTAGGATTCTATCTATCAACTCCTGTACCATGTTCAGCCCTTTCCCTTTGTTCCCGCTG 512
                       **** *********************** **** ***** * *** * ****** **** 

consensus_13044#0      GAGTTAAACATTTGCCAAAGTGGTTCTCATTCATATTGTATCTGGTAATATTGCAATCAA 1380
consensus_13044#1      GAGTTAAACATTTGCCAAAGTGGTTCTCATTCAAAAAAAAAAAAAAAAAAAGG------- 1091
consensus_13044#2      GAGTTAACCTTTTCCCAAAGGGGTTCCCATTCATATGGTATCGGGTAATATGCCAATCAC 572
                       ******* * *** ****** ***** ****** *    *      ** *          

consensus_13044#0      AAATGAATCGCAACCAAAAAAAAAAAA--- 1407
consensus_13044#1      ------------------------------
consensus_13044#2      CTTTGATTCCCACCCAAAAAAAAAAAAAAA 602