These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13064#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1252 fasta sequence [CCAATGGCGCCGCGGTGCAGCAACGCCGTCTTCGCGGCCATCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCTTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAGTATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTTTGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGTATTTCTGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAATTTGATAGTACTGATTGTACATTACACATTAATCAGACATATTGCTTTAATCAGATAGCATA] [+] EMBL AK108529 [CCAATGGCGCCGCGGTGCAGCAACGCCGTCTTCGCGGCCATCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCTTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAGTATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTT ] [+] EMBL CB656820 [ ACGCCGTCTTCGCGGCCATCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCTTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAA AACCGGCGGCACAA ] [+] EMBL CA752608 [ TCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGC CCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCAAGCCACC ] [-] EMBL CB629789 [ CTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTTTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCCTGGTCGAATGACCAGTTTGAGCTTTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTTTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTTTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAATATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTTTCAGGAAAATATGGCTGGCCCTTTTAATAGTTACTTTTGGGTATGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGGATTTCTGAATTC ] [-] EMBL CB656821 [ TGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCTTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAGTATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTTTGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGTATTTCTGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAATTTGATAGTACTGATTGTACATTACACATTAATCAGACATATTGCTTTAATCAGATAGCATA] [+] EMBL BI811870 [ CAAGCCGGGTGTTCTTGGC ACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAAC CCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAAC ACCGGCGGCACAAGTACTC CTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTT TGGCGTGTGTGTTTGT TTGT TTGCTTGCTGGTTGGCTACATGAAC ACTGTAGTATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTTTGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGC AAGTATTTCTGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAATTTGATAaaaa ] [+] EMBL AU176516 [ CTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAGTATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTTTGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGTATTTCTGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAAaaa ] consensusID : consensus_13064#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1002 fasta sequence [TGATCAACATCAGCAACTCATCTAAAACTATTCAAGTTGAAGTTAACTGGGATAGTGAAGGTAAGAATGAATCAACTGCTCACGCACACCCATTGATTTGGTCTTACAAGTTCACTTTGCAAGTTGCAAGACCTTCTATCCTTGCATGTTTCTTCAGATAACGACGGCGCAGAATGCAATTTGCAACTGATTTAAGAATACACACACTTTGTCACTTTTATTCAGTCTAATGAAGTAATTACCTACTTTGATCTTGAAAGACATCACATCAGCTGTTGTAAAATTTTTAAAGAAGCAATCTTCTTGAAGATATCAAAAGAGTTTTAAGATCACTTCAAAAGTATAAATCTGTTCATCTTGTGTCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCCTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAATATTTCAGGAAAAAGATTTATGCTTCAGTAAAAAAAAAAAGCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTATGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGTATTTCTGAATTC] [-] EMBL CB634612 [TGATCAACATCAGCAACTCATCTAAAACTATTCAAGTTGAAGTTAACTGGGATAGTGAAGGTAAGAATGAATCAACTGCTCACGCACACCCATTGATTTGGTCTTACAAGTTCACTTTGCAAGTTGCAAGACCTTCTATCCTTGCATGTTTCTTCAGATAACGACGGCGCAGAATGCAATTTGCAACTGATTTAAGAATACACACACTTTGTCACTTTTATTCAGTCTAATGAAGTAATTACCTACTTTGATCTTGAAAGACATCACATCAGCTGTTGTAAAATTTTTAAAGAAGCAATCTTCTTGAAGATATCAAAAGAGTTTTAAGATCACTTCAAAAGTATAAATCTGTTCATCTTGTGTCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCCTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAATATTTCAGGAAAAAGATTTATGCTTCAGTAAAAAAAAAAAG ] [-] EMBL CB633107 [ TTTGCAACTGATTTAAGAATACACACACTTTGTCACTTTTATTCAGTCTAATGAAGTAATTACCTACTTTGATCTTGAAAGACATCACATCAGCTGTTGTAAAATTTTTAAAGAAGCAATCTTCTTGAAGATATCAAAAGAGTTTTAAGATCACTTCAAAAGTATAAATCTGTTCATCTTGTGTCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCCTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAATATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTATGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGTATTTCTGAATTC] consensusID : consensus_13064#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 868 fasta sequence [AGCAACGCCGTCTTCGCGGCCTTCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGGTACCAATACCATTCGAGCTGTTACATATTTCCCCAAATTTACTAAATTTCATTGGCAATATATTATCAAACTTTACTTAGATAACTAATTTGATTATTATTGGTAGCTGAAAGTACTTGATGCTAATTTGTGCACACAATTAATTCTGTATATATTTGCACAAATATTTCTGTAATTAATTAATTCTGAGCTGCATGCATAAATAGTTTTTTTTTCAGATAATGACATAGATGTTGTTAGTTGTTACAGAAGACAAATTATAAAAAAAAATAAATTTAGATAACAAATTAAACTAAACTAGTTTTTGAGGCAAAGCTAATGCACACTTCTTTGCCTTATGATATCTAATCCTGTCATCCTCTATGT] [+] EMBL CB633106 [AGCAACGCCGTCTTCGCGGCCTTCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGGTACCAATACCATTCGAGCTGTTACATATTTCCCCAAATTTACTAAATTTCATTGGCAATATATTATCAAACTTTACTTAGATAACTAATTTGATTATTATTGGTAGCTGAAAGTACTTGATGCTAATTTGTGCACACAATTAATTCTGTATATATTTGCACAAATATTTCTGTAATTAATTAATTCTGAGCTGCATGCATAAATAGTTTTTTTTTCAGATAATGACATAGATGTTGTTAGTTGTTACAGAAGACAAATTATAAAAAAAAATAAATTTAGATAACAAATTAAACTAAACTAGTTTTTGAGGCAAAGCTAATGCACACTTCTTTGCCTTATGATATCTAATCCTGTCATCCTCTATGT] [+] EMBL CB634611 [ CGCCGTCTTCGCGGCCTTCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGGTACCAATACCATTCGAGCTGTTACATATTTCCCCAAATTTACTAAATTTCATTGGCAATATATTATCAAACTTTACTTAGATAACTAATTTGATTATTATTGGTAGCTGAAAGTACTTGATGCTAATTTGTGCACACAATTAATTCTGTATATATTTGCACAAATATTTCTGTAATTAATTAATTCTGAGCTGCATGCATAAATAGTTTTTTTTTCAGATAATGACATAGATGTTGTTAGTTGTTACAGAAGACAAATTAT ] consensusID : consensus_13064#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 847 fasta sequence [CCAAGTGTCTGGGAGGCTGCTGGGCTTGACGGGCANTGGCCCAGTTCCCTGGGNCAAGAGGCCCCGGNGTGTTTCATTTGGGCAAAACCACTGGAATGGAATGCTATGNCTCTGGNGATAGATATGAATTCGCCCNTTGTCTGTCATACGCCGCCTTTGCTGTTCTCGCCCCTGCCCTGCCCTGCGTGCTNTGCTTGACTGCGCCTGCTGCGCTGNGCTTGGCCGGCCGGCTGGCTCGGGATAGCNTACCTGTCTTGGCTACAAAGGTGACTGCGGCTTGGGGTGTGGGGGGATATATNTGGATGGAGGGGTGTGTNTTGCGGTGTGTGTGTGGGCTGCTAGGATGGGAATGGCGTGTGTGTGGTTGGGGGCGTGGTGGGTGGTGTGTGGTGCGTTTGTGGTTGGCTTGGNCTGGGGTGTGGGGCGTGACCATGGATACTATACCTGGTGAGTGATGTTGGCAAGGGAAATATAGATGTGTGATGCGTGTGCTAGTGAGAATGATGGCGCGTGTGCACTATGGTGTGTATGGATATGGGATGCCGCTGAGGTGTGTGAGGTGAATAATGGTGGTGTGGGTTGAGTGTGCTGTGATTGAGGATTTTGGGAGGAATGCTGCTGCAGGGAAAATGATGGGCTGGGACCTGTGTTGAATGAGTGGACTGTTTGGGGTTTGGGAACAAGTGCACAGGAATGGAGCCGGGTGCCAGGAGTGTGGAAGCCTGCTGGCTGTGTGGTGCAGCGTGGTGATGAATGGNCAAAAGGTANTTCNGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAATTNGATAGTACNGAGTNGNACATNACACATT] [+] EMBL BQ906921 [CCAAGTGTCTGGGAGGCTGCTGGGCTTGACGGGCANTGGCCCAGTTCCCTGGGNCAAGAGGCCCCGGNGTGTTTCATTTGGGCAAAACCACTGGAATGGAATGCTATGNCTCTGGNGATAGATATGAATTCGCCCNTTGTCTGTCATACGCCGCCTTTGCTGTTCTCGCCCCTGCCCTGCCCTGCGTGCTNTGCTTGACTGCGCCTGCTGCGCTGNGCTTGGCCGGCCGGCTGGCTCGGGATAGCNTACCTGTCTTGGCTACAAAGGTGACTGCGGCTTGGGGTGTGGGGGGATATATNTGGATGGAGGGGTGTGTNTTGCGGTGTGTGTGTGGGCTGCTAGGATGGGAATGGCGTGTGTGTGGTTGGGGGCGTGGTGGGTGGTGTGTGGTGCGTTTGTGGTTGGCTTGGNCTGGGGTGTGGGGCGTGACCATGGATACTATACCTGGTGAGTGATGTTGGCAAGGGAAATATAGATGTGTGATGCGTGTGCTAGTGAGAATGATGGCGCGTGTGCACTATGGTGTGTATGGATATGGGATGCCGCTGAGGTGTGTGAGGTGAATAATGGTGGTGTGGGTTGAGTGTGCTGTGATTGAGGATTTTGGGAGGAATGCTGCTGCAGGGAAAATGATGGGCTGGGACCTGTGTTGAATGAGTGGACTGTTTGGGGTTTGGGAACAAGTGCACAGGAATGGAGCCGGGTGCCAGGAGTGTGGAAGCCTGCTGGCTGTGTGGTGCAGCGTGGTGATGAATGGNCAAAAGGTANTTCNGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAATTNGATAGTACNGAGTNGNACATNACACATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13064#1 ------------------------------------------------------------ consensus_13064#3 ------------------------------------------------------------ consensus_13064#0 CCAATGGCGCCGCGGTGCAGCAACGCCGTCTTCGCGGCCATCAACGTCGTCACGCTCCTC 60 consensus_13064#2 ------------------------------------------------------------ consensus_13064#1 ------------------------------------------------------------ consensus_13064#3 ------------------------------------------------------------ consensus_13064#0 CTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGC 120 consensus_13064#2 ------------------------------------------------------------ consensus_13064#1 ----TGATCAACATCAGCAACTCATCTAAAACTATTCAAGTTGAAGTTAACTGGGATAGT 56 consensus_13064#3 ------------------------------------------------------------ consensus_13064#0 GGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATC 180 consensus_13064#2 ------------------------------------------------------------ consensus_13064#1 GAAGGTAAGAATGAATCAAC---TGCTCACGCACACCCATT---GATTTGGTCT-TACAA 109 consensus_13064#3 ---------------CCAAG---TGTCTGGG-AGGCTGCTG---GGCTTGACGGGCANTG 38 consensus_13064#0 GTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGG 240 consensus_13064#2 --------------------------------------------------------AGCA 4 consensus_13064#1 GTTCACTTTGCA-----AGTTGCAA-GACCTTCTATCCTTGCATGTTTCTTCAGATAACG 163 consensus_13064#3 GCCCAGTTCCCT-----GGGN-CAA-GAGGCCCCGGNGTGTTTCATTTGGGCAAA-ACCA 90 consensus_13064#0 GCCTACCTCCTCCTGACGGGCCTCC-TCATCCTCGCCGCCGCCTGCTTCGGCGTG-TTCG 298 consensus_13064#2 ACGCCGTCTTCGC---GGCCTTCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCG 61 * * consensus_13064#1 ACGGCGCAGAATGCAAT-TTGCAACTGATTTAAGAATACACAC-ACTTTGTCACTTTTAT 221 consensus_13064#3 CTGGAATGGAATGCTATGNCTCTGGNGATAGATATGAATTCGC-CCNTTGTCTGTCATAC 149 consensus_13064#0 CGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGT 358 consensus_13064#2 CCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGG--CGTCACCGAGTGCGA 119 * * * consensus_13064#1 TCAGTCTAATGAAGTAATTACC--TACTTTGATCT---TGAAAGACATCACATCAGCTGT 276 consensus_13064#3 GCCGCCTT-TGCTGTTCTCGCCCCTGCCCTGCCCTGCGTGCTNTGCTTGACTGCGCCTGC 208 consensus_13064#0 ACCACCTCGGCGACTACTCGACGTGGCTCCGCCGG----AGCGTGGAGGACGGCGGCCAC 414 consensus_13064#2 GCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGG--CGCCAT-CGTGGCCGTGTCCCT 176 * * * * consensus_13064#1 TGTAAAATTTTTAAAGAAGCAATCTTCTTGAAGATATCAAA---AGAGTTTTAAGATCAC 333 consensus_13064#3 TGCGCTGNGCTTGGCCGGCCGGCTGGCTCGG-GATAGCNTA---CCTGTCTTGG-----C 259 consensus_13064#0 TGGGCGAGGATCAG--GAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCA 472 consensus_13064#2 GGCG--GGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTC 234 * * * * * consensus_13064#1 TTCAAAAGTAT----AAATCTGT----TCATCTTGTGTCTGCA---GTCTGGATGCTGCA 382 consensus_13064#3 TACAAAGGTG-----ACTGCGGC----TTGGGGTGTGGGGGGATATATNTGGATGGAGGG 310 consensus_13064#0 ACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCA 532 consensus_13064#2 CTGACGGGCCTCCTCATCCTCGC-----CGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCG 289 * * * * * * consensus_13064#1 A-GCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCT 441 consensus_13064#3 GTGTGTNTTGCGGTGTGTGTGTGGGC-TGCTAGGATGGGA-ATGGCGTGTGTGTGGTTGG 368 consensus_13064#0 A-GCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCT 591 consensus_13064#2 TCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAG-------GGTTCAGGGAGTAC 342 * * * * * * * * * consensus_13064#1 ACACCCAGCAACTACT-CAGACCCTGACTGCAACTCCTGGTCGAATGACCAG-TCTGAGC 499 consensus_13064#3 GGGCGTGGTGGGTGGTGTGTGGTGCGTTTGTGGTTG--GCTTGGNCTGGGGT-GTGGGGC 425 consensus_13064#0 ACACCCAGCAACTACT-CAGACCCTGACTGCAACTCTTGGTCGAATGACCAG-TCTGAGC 649 consensus_13064#2 CACCTCGGCGACTACT-CGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGC 401 * * * * * * * ** consensus_13064#1 TCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGA 559 consensus_13064#3 GTGACCATGGATACTATACCTG----GTGAGTGATGTTGGCAA---GGGAAATA--TAGA 476 consensus_13064#0 TCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGA 709 consensus_13064#2 GAGGATCAGGA-GCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGA 460 ** * * * * * * * * * ** consensus_13064#1 AGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCG 619 consensus_13064#3 TGTGTGATGCGTGTGCTAGTGAGAATGATGGCGC-------------GTGTGC------- 516 consensus_13064#0 AGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCG 769 consensus_13064#2 CGCTCGACGAATTCGTCAACTCCAACCTC-TCGCC-------------GCTGCAGGTACC 506 * * * * * *** * * consensus_13064#1 GCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAG 679 consensus_13064#3 ACTATGGTGTGTATGGATATGGGATGCCGCTGAGGTGTGTG--AGGTGAATAATGGTGGT 574 consensus_13064#0 GCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAG 829 consensus_13064#2 AATACCATTCGAGCTGTTACATATTTCCCCAAATTTACTAA--ATTTCATTGGCAATAT- 563 * * * * * * * * * * consensus_13064#1 GGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGT--TGC 737 consensus_13064#3 GTGGGTTGAGTGT-GCTGTGATTGAGGATTT-TGGGAGGAATGCTGCTGCAGGGA--AAA 630 consensus_13064#0 GGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGT--TGC 887 consensus_13064#2 -ATTATCAAACTTTACTTAGATAACTAATTTGATTATTATTGGTAGCTGAAAGTACTTGA 622 * * ** *** *** * ** consensus_13064#1 TTGCTGGTTGGCTACATGAACAACTGTAA---TATTTCAGGAAAAAGATTTATGCTTCAG 794 consensus_13064#3 TGATGGGCTGGG---------ACCTGTGT---TGAATGAGTGGACTGTTTGGGGTTTGGG 678 consensus_13064#0 TTGCTGGTTGGCTACATGAACAACTGTAG---TATTTCAGGAAAAAGATTTATGCTTCAG 944 consensus_13064#2 TGCTAATTTGTGCACACAATTAATTCTGTATATATTTGCACAAATATTTCTGTAATTAAT 682 * ** * * * * * * * ** consensus_13064#1 TA---AAAAAAAAAAGCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTG 851 consensus_13064#3 AA---CAAGTGCACAGGAATGGAGC---CGGGTGCCAGGAGTGTGGAAGCCTGCTGGCTG 732 consensus_13064#0 TA---AATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTG 1001 consensus_13064#2 TAATTCTGAGCTGCATGCATAAATAGTTTTTTTTTCAGATAATGACATAGATGTTGTTAG 742 * ** ** * ** ** * consensus_13064#1 AGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTA 911 consensus_13064#3 TGT-----GGTGCAGCGTGGTGATGAATGGNCAAAAGGTANTTCNGAATTCAGATGATTT 787 consensus_13064#0 AGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTA 1061 consensus_13064#2 TTGTTACAGAAGACAAATTATAA-AAAAAAATAAATTTAGATAACAAATTAAACTAAACT 801 * * * *** ** * consensus_13064#1 C--TTTTGGGTATGGAACAGT-CACAG-AATGAGCCGGTCCAGAGTTGAAGCCTCTGCTT 967 consensus_13064#3 ATGTTCTGAATCTCAAATTTT-CACAGTAATTNGATAGTACNGAGTNGNACATNACACAT 846 consensus_13064#0 C--TTTTGGGTTTGGAACAGT-CACAG-AATGAGCCGGTCCAGAGTTGAAGCCTCTGCTT 1117 consensus_13064#2 AGTTTTTGAGGCAAAGCTAATGCACACTTCTTTGCCTTATGATATCTAATCCTGTCATCC 861 ** ** * **** * * * consensus_13064#1 TGTCAGCGTGTATAATGCAAAGTATTTCTGAATTC------------------------- 1002 consensus_13064#3 T----------------------------------------------------------- 847 consensus_13064#0 TGTCAGCGTGTATAATGCAAAGTATTTCTGAATTCAGATGATTTATGTTCTGAATCTCAA 1177 consensus_13064#2 TCTATGT----------------------------------------------------- 868 * consensus_13064#1 ------------------------------------------------------------ consensus_13064#3 ------------------------------------------------------------ consensus_13064#0 ATTTTCACAGTAATTTGATAGTACTGATTGTACATTACACATTAATCAGACATATTGCTT 1237 consensus_13064#2 ------------------------------------------------------------ consensus_13064#1 --------------- consensus_13064#3 --------------- consensus_13064#0 TAATCAGATAGCATA 1252 consensus_13064#2 --------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||