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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13064#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1252 fasta sequence
[CCAATGGCGCCGCGGTGCAGCAACGCCGTCTTCGCGGCCATCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCTTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAGTATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTTTGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGTATTTCTGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAATTTGATAGTACTGATTGTACATTACACATTAATCAGACATATTGCTTTAATCAGATAGCATA]
[+] EMBL AK108529 [CCAATGGCGCCGCGGTGCAGCAACGCCGTCTTCGCGGCCATCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCTTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAGTATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTT ]
[+] EMBL CB656820 [ ACGCCGTCTTCGCGGCCATCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCTTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAA AACCGGCGGCACAA ]
[+] EMBL CA752608 [ TCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGC CCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCAAGCCACC ]
[-] EMBL CB629789 [ CTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTTTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCCTGGTCGAATGACCAGTTTGAGCTTTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTTTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTTTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAATATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTTTCAGGAAAATATGGCTGGCCCTTTTAATAGTTACTTTTGGGTATGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGGATTTCTGAATTC ]
[-] EMBL CB656821 [ TGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCTTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAGTATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTTTGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGTATTTCTGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAATTTGATAGTACTGATTGTACATTACACATTAATCAGACATATTGCTTTAATCAGATAGCATA]
[+] EMBL BI811870 [ CAAGCCGGGTGTTCTTGGC ACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAAC CCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAAC ACCGGCGGCACAAGTACTC CTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTT TGGCGTGTGTGTTTGT TTGT TTGCTTGCTGGTTGGCTACATGAAC ACTGTAGTATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTTTGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGC AAGTATTTCTGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAATTTGATAaaaa ]
[+] EMBL AU176516 [ CTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAGTATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTTTGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGTATTTCTGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAAaaa ]
consensusID : consensus_13064#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1002 fasta sequence
[TGATCAACATCAGCAACTCATCTAAAACTATTCAAGTTGAAGTTAACTGGGATAGTGAAGGTAAGAATGAATCAACTGCTCACGCACACCCATTGATTTGGTCTTACAAGTTCACTTTGCAAGTTGCAAGACCTTCTATCCTTGCATGTTTCTTCAGATAACGACGGCGCAGAATGCAATTTGCAACTGATTTAAGAATACACACACTTTGTCACTTTTATTCAGTCTAATGAAGTAATTACCTACTTTGATCTTGAAAGACATCACATCAGCTGTTGTAAAATTTTTAAAGAAGCAATCTTCTTGAAGATATCAAAAGAGTTTTAAGATCACTTCAAAAGTATAAATCTGTTCATCTTGTGTCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCCTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAATATTTCAGGAAAAAGATTTATGCTTCAGTAAAAAAAAAAAGCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTATGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGTATTTCTGAATTC]
[-] EMBL CB634612 [TGATCAACATCAGCAACTCATCTAAAACTATTCAAGTTGAAGTTAACTGGGATAGTGAAGGTAAGAATGAATCAACTGCTCACGCACACCCATTGATTTGGTCTTACAAGTTCACTTTGCAAGTTGCAAGACCTTCTATCCTTGCATGTTTCTTCAGATAACGACGGCGCAGAATGCAATTTGCAACTGATTTAAGAATACACACACTTTGTCACTTTTATTCAGTCTAATGAAGTAATTACCTACTTTGATCTTGAAAGACATCACATCAGCTGTTGTAAAATTTTTAAAGAAGCAATCTTCTTGAAGATATCAAAAGAGTTTTAAGATCACTTCAAAAGTATAAATCTGTTCATCTTGTGTCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCCTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAATATTTCAGGAAAAAGATTTATGCTTCAGTAAAAAAAAAAAG ]
[-] EMBL CB633107 [ TTTGCAACTGATTTAAGAATACACACACTTTGTCACTTTTATTCAGTCTAATGAAGTAATTACCTACTTTGATCTTGAAAGACATCACATCAGCTGTTGTAAAATTTTTAAAGAAGCAATCTTCTTGAAGATATCAAAAGAGTTTTAAGATCACTTCAAAAGTATAAATCTGTTCATCTTGTGTCTGCAGTCTGGATGCTGCAAGCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCTACACCCAGCAACTACTCAGACCCTGACTGCAACTCCTGGTCGAATGACCAGTCTGAGCTCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGAAGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCGGCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAGGGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGTTGCTTGCTGGTTGGCTACATGAACAACTGTAATATTTCAGGAAAAAGATTTATGCTTCAGTAAATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTGAGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTACTTTTGGGTATGGAACAGTCACAGAATGAGCCGGTCCAGAGTTGAAGCCTCTGCTTTGTCAGCGTGTATAATGCAAAGTATTTCTGAATTC]
consensusID : consensus_13064#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 868 fasta sequence
[AGCAACGCCGTCTTCGCGGCCTTCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGGTACCAATACCATTCGAGCTGTTACATATTTCCCCAAATTTACTAAATTTCATTGGCAATATATTATCAAACTTTACTTAGATAACTAATTTGATTATTATTGGTAGCTGAAAGTACTTGATGCTAATTTGTGCACACAATTAATTCTGTATATATTTGCACAAATATTTCTGTAATTAATTAATTCTGAGCTGCATGCATAAATAGTTTTTTTTTCAGATAATGACATAGATGTTGTTAGTTGTTACAGAAGACAAATTATAAAAAAAAATAAATTTAGATAACAAATTAAACTAAACTAGTTTTTGAGGCAAAGCTAATGCACACTTCTTTGCCTTATGATATCTAATCCTGTCATCCTCTATGT]
[+] EMBL CB633106 [AGCAACGCCGTCTTCGCGGCCTTCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGGTACCAATACCATTCGAGCTGTTACATATTTCCCCAAATTTACTAAATTTCATTGGCAATATATTATCAAACTTTACTTAGATAACTAATTTGATTATTATTGGTAGCTGAAAGTACTTGATGCTAATTTGTGCACACAATTAATTCTGTATATATTTGCACAAATATTTCTGTAATTAATTAATTCTGAGCTGCATGCATAAATAGTTTTTTTTTCAGATAATGACATAGATGTTGTTAGTTGTTACAGAAGACAAATTATAAAAAAAAATAAATTTAGATAACAAATTAAACTAAACTAGTTTTTGAGGCAAAGCTAATGCACACTTCTTTGCCTTATGATATCTAATCCTGTCATCCTCTATGT]
[+] EMBL CB634611 [ CGCCGTCTTCGCGGCCTTCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATCGTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTCCTGACGGGCCTCCTCATCCTCGCCGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGTACCACCTCGGCGACTACTCGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGCGAGGATCAGGAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGGTACCAATACCATTCGAGCTGTTACATATTTCCCCAAATTTACTAAATTTCATTGGCAATATATTATCAAACTTTACTTAGATAACTAATTTGATTATTATTGGTAGCTGAAAGTACTTGATGCTAATTTGTGCACACAATTAATTCTGTATATATTTGCACAAATATTTCTGTAATTAATTAATTCTGAGCTGCATGCATAAATAGTTTTTTTTTCAGATAATGACATAGATGTTGTTAGTTGTTACAGAAGACAAATTAT ]
consensusID : consensus_13064#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 847 fasta sequence
[CCAAGTGTCTGGGAGGCTGCTGGGCTTGACGGGCANTGGCCCAGTTCCCTGGGNCAAGAGGCCCCGGNGTGTTTCATTTGGGCAAAACCACTGGAATGGAATGCTATGNCTCTGGNGATAGATATGAATTCGCCCNTTGTCTGTCATACGCCGCCTTTGCTGTTCTCGCCCCTGCCCTGCCCTGCGTGCTNTGCTTGACTGCGCCTGCTGCGCTGNGCTTGGCCGGCCGGCTGGCTCGGGATAGCNTACCTGTCTTGGCTACAAAGGTGACTGCGGCTTGGGGTGTGGGGGGATATATNTGGATGGAGGGGTGTGTNTTGCGGTGTGTGTGTGGGCTGCTAGGATGGGAATGGCGTGTGTGTGGTTGGGGGCGTGGTGGGTGGTGTGTGGTGCGTTTGTGGTTGGCTTGGNCTGGGGTGTGGGGCGTGACCATGGATACTATACCTGGTGAGTGATGTTGGCAAGGGAAATATAGATGTGTGATGCGTGTGCTAGTGAGAATGATGGCGCGTGTGCACTATGGTGTGTATGGATATGGGATGCCGCTGAGGTGTGTGAGGTGAATAATGGTGGTGTGGGTTGAGTGTGCTGTGATTGAGGATTTTGGGAGGAATGCTGCTGCAGGGAAAATGATGGGCTGGGACCTGTGTTGAATGAGTGGACTGTTTGGGGTTTGGGAACAAGTGCACAGGAATGGAGCCGGGTGCCAGGAGTGTGGAAGCCTGCTGGCTGTGTGGTGCAGCGTGGTGATGAATGGNCAAAAGGTANTTCNGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAATTNGATAGTACNGAGTNGNACATNACACATT]
[+] EMBL BQ906921 [CCAAGTGTCTGGGAGGCTGCTGGGCTTGACGGGCANTGGCCCAGTTCCCTGGGNCAAGAGGCCCCGGNGTGTTTCATTTGGGCAAAACCACTGGAATGGAATGCTATGNCTCTGGNGATAGATATGAATTCGCCCNTTGTCTGTCATACGCCGCCTTTGCTGTTCTCGCCCCTGCCCTGCCCTGCGTGCTNTGCTTGACTGCGCCTGCTGCGCTGNGCTTGGCCGGCCGGCTGGCTCGGGATAGCNTACCTGTCTTGGCTACAAAGGTGACTGCGGCTTGGGGTGTGGGGGGATATATNTGGATGGAGGGGTGTGTNTTGCGGTGTGTGTGTGGGCTGCTAGGATGGGAATGGCGTGTGTGTGGTTGGGGGCGTGGTGGGTGGTGTGTGGTGCGTTTGTGGTTGGCTTGGNCTGGGGTGTGGGGCGTGACCATGGATACTATACCTGGTGAGTGATGTTGGCAAGGGAAATATAGATGTGTGATGCGTGTGCTAGTGAGAATGATGGCGCGTGTGCACTATGGTGTGTATGGATATGGGATGCCGCTGAGGTGTGTGAGGTGAATAATGGTGGTGTGGGTTGAGTGTGCTGTGATTGAGGATTTTGGGAGGAATGCTGCTGCAGGGAAAATGATGGGCTGGGACCTGTGTTGAATGAGTGGACTGTTTGGGGTTTGGGAACAAGTGCACAGGAATGGAGCCGGGTGCCAGGAGTGTGGAAGCCTGCTGGCTGTGTGGTGCAGCGTGGTGATGAATGGNCAAAAGGTANTTCNGAATTCAGATGATTTATGTTCTGAATCTCAAATTTTCACAGTAATTNGATAGTACNGAGTNGNACATNACACATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13064#1 ------------------------------------------------------------
consensus_13064#3 ------------------------------------------------------------
consensus_13064#0 CCAATGGCGCCGCGGTGCAGCAACGCCGTCTTCGCGGCCATCAACGTCGTCACGCTCCTC 60
consensus_13064#2 ------------------------------------------------------------
consensus_13064#1 ------------------------------------------------------------
consensus_13064#3 ------------------------------------------------------------
consensus_13064#0 CTGGGCGCCGCCGTCCTCGCCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGC 120
consensus_13064#2 ------------------------------------------------------------
consensus_13064#1 ----TGATCAACATCAGCAACTCATCTAAAACTATTCAAGTTGAAGTTAACTGGGATAGT 56
consensus_13064#3 ------------------------------------------------------------
consensus_13064#0 GGCGTCACCGAGTGCGAGCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGGCGCCATC 180
consensus_13064#2 ------------------------------------------------------------
consensus_13064#1 GAAGGTAAGAATGAATCAAC---TGCTCACGCACACCCATT---GATTTGGTCT-TACAA 109
consensus_13064#3 ---------------CCAAG---TGTCTGGG-AGGCTGCTG---GGCTTGACGGGCANTG 38
consensus_13064#0 GTGGCCGTGTCCCTGGCGGGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGG 240
consensus_13064#2 --------------------------------------------------------AGCA 4
consensus_13064#1 GTTCACTTTGCA-----AGTTGCAA-GACCTTCTATCCTTGCATGTTTCTTCAGATAACG 163
consensus_13064#3 GCCCAGTTCCCT-----GGGN-CAA-GAGGCCCCGGNGTGTTTCATTTGGGCAAA-ACCA 90
consensus_13064#0 GCCTACCTCCTCCTGACGGGCCTCC-TCATCCTCGCCGCCGCCTGCTTCGGCGTG-TTCG 298
consensus_13064#2 ACGCCGTCTTCGC---GGCCTTCAACGTCGTCACGCTCCTCCTGGGCGCCGCCGTCCTCG 61
* *
consensus_13064#1 ACGGCGCAGAATGCAAT-TTGCAACTGATTTAAGAATACACAC-ACTTTGTCACTTTTAT 221
consensus_13064#3 CTGGAATGGAATGCTATGNCTCTGGNGATAGATATGAATTCGC-CCNTTGTCTGTCATAC 149
consensus_13064#0 CGCTCGTCGTCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAGGGTTCAGGGAGT 358
consensus_13064#2 CCGCGGGGATCTACTACGGCGCCCCGCACCGCGGCGGCGGCGG--CGTCACCGAGTGCGA 119
* * *
consensus_13064#1 TCAGTCTAATGAAGTAATTACC--TACTTTGATCT---TGAAAGACATCACATCAGCTGT 276
consensus_13064#3 GCCGCCTT-TGCTGTTCTCGCCCCTGCCCTGCCCTGCGTGCTNTGCTTGACTGCGCCTGC 208
consensus_13064#0 ACCACCTCGGCGACTACTCGACGTGGCTCCGCCGG----AGCGTGGAGGACGGCGGCCAC 414
consensus_13064#2 GCGGTTCCTCCGCGCGCCGGCGCTCGCCCTCGGCGG--CGCCAT-CGTGGCCGTGTCCCT 176
* * * *
consensus_13064#1 TGTAAAATTTTTAAAGAAGCAATCTTCTTGAAGATATCAAA---AGAGTTTTAAGATCAC 333
consensus_13064#3 TGCGCTGNGCTTGGCCGGCCGGCTGGCTCGG-GATAGCNTA---CCTGTCTTGG-----C 259
consensus_13064#0 TGGGCGAGGATCAG--GAGCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCA 472
consensus_13064#2 GGCG--GGGCTCGCCGGCGCGTGCTGCCGCGCGACGCCGCTGCTGTGGGCCTACCTCCTC 234
* * * * *
consensus_13064#1 TTCAAAAGTAT----AAATCTGT----TCATCTTGTGTCTGCA---GTCTGGATGCTGCA 382
consensus_13064#3 TACAAAGGTG-----ACTGCGGC----TTGGGGTGTGGGGGGATATATNTGGATGGAGGG 310
consensus_13064#0 ACCAGACGCTCGACGAATTCGTCAACTCCAACCTCTCGCCGCTGCAGTCTGGATGCTGCA 532
consensus_13064#2 CTGACGGGCCTCCTCATCCTCGC-----CGCCGCCTGCTTCGGCGTGTTCGCGCTCGTCG 289
* * * * * *
consensus_13064#1 A-GCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCT 441
consensus_13064#3 GTGTGTNTTGCGGTGTGTGTGTGGGC-TGCTAGGATGGGA-ATGGCGTGTGTGTGGTTGG 368
consensus_13064#0 A-GCCACCAACAGCATGCAACTTCACATACCAGAACGAGACATACTGGATCAAGCCTCCT 591
consensus_13064#2 TCACCAACGCCGGCGCCGGGCGGGCCGTGTCCGGGAGAG-------GGTTCAGGGAGTAC 342
* * * * * * * * *
consensus_13064#1 ACACCCAGCAACTACT-CAGACCCTGACTGCAACTCCTGGTCGAATGACCAG-TCTGAGC 499
consensus_13064#3 GGGCGTGGTGGGTGGTGTGTGGTGCGTTTGTGGTTG--GCTTGGNCTGGGGT-GTGGGGC 425
consensus_13064#0 ACACCCAGCAACTACT-CAGACCCTGACTGCAACTCTTGGTCGAATGACCAG-TCTGAGC 649
consensus_13064#2 CACCTCGGCGACTACT-CGACGTGGCTCCGCCGGAGCGTGGAGGACGGCGGCCACTGGGC 401
* * * * * * * **
consensus_13064#1 TCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGA 559
consensus_13064#3 GTGACCATGGATACTATACCTG----GTGAGTGATGTTGGCAA---GGGAAATA--TAGA 476
consensus_13064#0 TCTGCTACGGCTGCCAGTCCTGCAAGGCCGGTGTTCTTGGCAACCTGAGGAGCAGCTGGA 709
consensus_13064#2 GAGGATCAGGA-GCTGCCTCGTCGACACCGGCGTGTGCCGGAGCTTGAAGAGCAACCAGA 460
** * * * * * * * * * **
consensus_13064#1 AGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCG 619
consensus_13064#3 TGTGTGATGCGTGTGCTAGTGAGAATGATGGCGC-------------GTGTGC------- 516
consensus_13064#0 AGAAGATCGCCTTCGTCAACGCCGCCTTCGTCGCCCTCCTCCTCGTCGTCTACTCCCTCG 769
consensus_13064#2 CGCTCGACGAATTCGTCAACTCCAACCTC-TCGCC-------------GCTGCAGGTACC 506
* * * * * *** * *
consensus_13064#1 GCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAG 679
consensus_13064#3 ACTATGGTGTGTATGGATATGGGATGCCGCTGAGGTGTGTG--AGGTGAATAATGGTGGT 574
consensus_13064#0 GCTGCTGCGCGCTCCGGAACAACCGGCGGCACAAGTACTCGCTGGTTGGGAAATGATGAG 829
consensus_13064#2 AATACCATTCGAGCTGTTACATATTTCCCCAAATTTACTAA--ATTTCATTGGCAATAT- 563
* * * * * * * * * *
consensus_13064#1 GGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGT--TGC 737
consensus_13064#3 GTGGGTTGAGTGT-GCTGTGATTGAGGATTT-TGGGAGGAATGCTGCTGCAGGGA--AAA 630
consensus_13064#0 GGTTTTTGGTTTTTGCTCAGATGAAGGTTTTGTGGCGTGTGTGTTTGTGTTGTGT--TGC 887
consensus_13064#2 -ATTATCAAACTTTACTTAGATAACTAATTTGATTATTATTGGTAGCTGAAAGTACTTGA 622
* * ** *** *** * **
consensus_13064#1 TTGCTGGTTGGCTACATGAACAACTGTAA---TATTTCAGGAAAAAGATTTATGCTTCAG 794
consensus_13064#3 TGATGGGCTGGG---------ACCTGTGT---TGAATGAGTGGACTGTTTGGGGTTTGGG 678
consensus_13064#0 TTGCTGGTTGGCTACATGAACAACTGTAG---TATTTCAGGAAAAAGATTTATGCTTCAG 944
consensus_13064#2 TGCTAATTTGTGCACACAATTAATTCTGTATATATTTGCACAAATATTTCTGTAATTAAT 682
* ** * * * * * * * **
consensus_13064#1 TA---AAAAAAAAAAGCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTG 851
consensus_13064#3 AA---CAAGTGCACAGGAATGGAGC---CGGGTGCCAGGAGTGTGGAAGCCTGCTGGCTG 732
consensus_13064#0 TA---AATATGCGCTTCCATGTTATGAATGATCGCTAGTTTAGTAAATATGTGTTGGTTG 1001
consensus_13064#2 TAATTCTGAGCTGCATGCATAAATAGTTTTTTTTTCAGATAATGACATAGATGTTGTTAG 742
* ** ** * ** ** *
consensus_13064#1 AGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTA 911
consensus_13064#3 TGT-----GGTGCAGCGTGGTGATGAATGGNCAAAAGGTANTTCNGAATTCAGATGATTT 787
consensus_13064#0 AGTTCTTGATTGAGATTTGAGAATCTCTCAGGAAAATATGGCTGGACCTTTTAATAGTTA 1061
consensus_13064#2 TTGTTACAGAAGACAAATTATAA-AAAAAAATAAATTTAGATAACAAATTAAACTAAACT 801
* * * *** ** *
consensus_13064#1 C--TTTTGGGTATGGAACAGT-CACAG-AATGAGCCGGTCCAGAGTTGAAGCCTCTGCTT 967
consensus_13064#3 ATGTTCTGAATCTCAAATTTT-CACAGTAATTNGATAGTACNGAGTNGNACATNACACAT 846
consensus_13064#0 C--TTTTGGGTTTGGAACAGT-CACAG-AATGAGCCGGTCCAGAGTTGAAGCCTCTGCTT 1117
consensus_13064#2 AGTTTTTGAGGCAAAGCTAATGCACACTTCTTTGCCTTATGATATCTAATCCTGTCATCC 861
** ** * **** * * *
consensus_13064#1 TGTCAGCGTGTATAATGCAAAGTATTTCTGAATTC------------------------- 1002
consensus_13064#3 T----------------------------------------------------------- 847
consensus_13064#0 TGTCAGCGTGTATAATGCAAAGTATTTCTGAATTCAGATGATTTATGTTCTGAATCTCAA 1177
consensus_13064#2 TCTATGT----------------------------------------------------- 868
*
consensus_13064#1 ------------------------------------------------------------
consensus_13064#3 ------------------------------------------------------------
consensus_13064#0 ATTTTCACAGTAATTTGATAGTACTGATTGTACATTACACATTAATCAGACATATTGCTT 1237
consensus_13064#2 ------------------------------------------------------------
consensus_13064#1 ---------------
consensus_13064#3 ---------------
consensus_13064#0 TAATCAGATAGCATA 1252
consensus_13064#2 ---------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||