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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13078#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2319 fasta sequence
[CCCCAACACCCATGGCAACTAGCCACCTCACCTCTCGCTCCCTCCTCGTCCAAGCCCAGTACCCCATCTCACGGCTCCCATCCAACCTCCGCCTCTCCCTCTCCCACCACAAGCAACCAGCCGCCGTCGCCAAGCGCCGCCGAGCCCCCGCCCCCTCCCACCCGGCCTTCTCTTCGGTCATCCGCGGCCGTCCCAAGAAAGTCCCCATCCCGGAAAACGGCGAGCCAGCCGCCGGTGTCCGCGTCACTGAACGTGGCCTGGCCTATCATCTTGACGGCGCGCCCTTCGAGTTCCAGTACAGTTACACAGAGACGCCGCGCGCGCGCCCCGTCGCGCTCCGCGAGGCCCCGTTCCTGCCGTTCGGGCCTGAGGTAACGCCGCGCCCATGGACCGGGAGGAAGCCGCTCCCCAAGAGCCGCAAGGAACTGCCTGAGTTCGACTCCTTCATGCTCCCGCCGCCGGGCAAGAAGGGGGTGAAGCCCGTGCAGTCGCCGGGGCCATTCCTTGCCGGCACGGAGCCGAGGTACCAAGCGGCGTCCAGGGAGGAGGTCCTCGGGGAGCCTCTCACAAAGGAGGAGGTCGACGAGCTCGTCAAGGCGACCCTCAAGACCAAGCGGCAGCTTAATATCGGTAGAGATGGTCTAACACACAATATGTTGGAGAACATTCATTCGCATTGGAAGAGGAAGAGAGTGTGCAAGATAAAATGCAAAGGTGTATGCACGGTTGATATGGATAATGTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGTAATTCATCATCAGGGTGGTGTGATATTTCTCTTTCGTGGTAGAAACTACAATTACAGAACTCGCCCAATCTATCCACTTATGCTTTGGAAACCTGCTGCACCAGTGTACCCCCGCTTGGTTAAAAAGATCCCAGACGGCTTAACTCCAGATGAGGCAGAAGATATGCGCAAGAGAGGACGTCAGTTACCACCAATTTGCAAACTCGGAAAAAATGGTGTTTATCTTAACCTCGTGAAGCAAGTTCGAGAAGCATTTGAAGCATGTGATCTTGTCCGGGTTGATTGCTCAGGTCTTAATAAAAGTGATTGCAGAAAGATAGGAGCTAAACTTAAGGATCTAGTTCCCTGTACCTTACTGTCTTTTGAGTTTGAACATATACTGATGTGGAGAGGAAATGATTGGAAATCATCCCTTCCTCCATTAGAAGAAAATGATTTTAAAGTGGCGAGCGACCAAATTTTGAATAGCAAAGAAGCAGGTTCTGGAAGTGCTCTGACCCCAATTGAGCTGGTCAACAATGCCACGTCTCTCAAGAAATGCAACTTGATTGAAGGTGCAGAAAAATTGGAAGATTCCATGAAGTCTAGTTTTGAAAATGGTATGATTTTGGGTTCTGCATGTGGAAACCCTGGAGTATGCAACTCTGAAGGTATAGATGGAACTGAGTCCTCAGCTGATGCTCCAATTGAATTTTCTCCTTCAAATTCAGCAAGGGATTTAGATCCATCTCAAACATCAACATTGTATTGCCAAAGCTCCCTATTGGACAAGAGTGAAAATGGAGAGCTCATTGAGATGTACCCTGACAGATGTGGAAACTCGGAACAATCTCCAGATGTACCAGAAGCTTTAACTTGTCTAATGGGCAGCAGTGATGAGATTCATGAATTGGAAACTATGAGGAGAAACTGCAAACATTTAAACGGCAGCGATGGTGTTAACAGTGATTCCATAGTCCCTTCCTACATGGAAGGAATTTTACTCCTT-TTCAAACAAGCCATTGACAGTGGCATGGCACTCGTTCTGAATGAAAATGAGTTTGCTGATGCCA-ATTATGTGTATC--AAAAGTCT-GTTGCTTTTACA-AA-GACGGCTCCACGATACCTGGTACTCCGGCATACACCA-AGGAAGTCCCA-TGGTACCCAGAAGACTGAGCCAGCCA-AGAATGTAAGGATAAATAAGCATCTTGAAGAACATAAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCATGCACGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGTTCCTTTATTAACTGAAGGTGTGTTGCGTTATCAACCTTGAATT-AACGTGCAAAGTATATACATGTACA-TTGATATGGGACGTATAAAACTTTTCGTCAATTTGGTCATGCTGTGTAACTGATCACGCTTTCTGCATTGAAATGTTGGAATGTAAGTAATATGGAACGGCGAAG-ATTTTCAGA--AAAAAAAAAA]
[+] EMBL AK065221 [CCCCAACACCCATGGCAACTAGCCACCTCACCTCTCGCTCCCTCCTCGTCCAAGCCCAGTACCCCATCTCACGGCTCCCATCCAACCTCCGCCTCTCCCTCTCCCACCACAAGCAACCAGCCGCCGTCGCCAAGCGCCGCCGAGCCCCCGCCCCCTCCCACCCGGCCTTCTCTTCGGTCATCCGCGGCCGTCCCAAGAAAGTCCCCATCCCGGAAAACGGCGAGCCAGCCGCCGGTGTCCGCGTCACTGAACGTGGCCTGGCCTATCATCTTGACGGCGCGCCCTTCGAGTTCCAGTACAGTTACACAGAGACGCCGCGCGCGCGCCCCGTCGCGCTCCGCGAGGCCCCGTTCCTGCCGTTCGGGCCTGAGGTAACGCCGCGCCCATGGACCGGGAGGAAGCCGCTCCCCAAGAGCCGCAAGGAACTGCCTGAGTTCGACTCCTTCATGCTCCCGCCGCCGGGCAAGAAGGGGGTGAAGCCCGTGCAGTCGCCGGGGCCATTCCTTGCCGGCACGGAGCCGAGGTACCAAGCGGCGTCCAGGGAGGAGGTCCTCGGGGAGCCTCTCACAAAGGAGGAGGTCGACGAGCTCGTCAAGGCGACCCTCAAGACCAAGCGGCAGCTTAATATCGGTAGAGATGGTCTAACACACAATATGTTGGAGAACATTCATTCGCATTGGAAGAGGAAGAGAGTGTGCAAGATAAAATGCAAAGGTGTATGCACGGTTGATATGGATAATGTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGTAATTCATCATCAGGGTGGTGTGATATTTCTCTTTCGTGGTAGAAACTACAATTACAGAACTCGCCCAATCTATCCACTTATGCTTTGGAAACCTGCTGCACCAGTGTACCCCCGCTTGGTTAAAAAGATCCCAGACGGCTTAACTCCAGATGAGGCAGAAGATATGCGCAAGAGAGGACGTCAGTTACCACCAATTTGCAAACTCGGAAAAAATGGTGTTTATCTTAACCTCGTGAAGCAAGTTCGAGAAGCATTTGAAGCATGTGATCTTGTCCGGGTTGATTGCTCAGGTCTTAATAAAAGTGATTGCAGAAAGATAGGAGCTAAACTTAAGGATCTAGTTCCCTGTACCTTACTGTCTTTTGAGTTTGAACATATACTGATGTGGAGAGGAAATGATTGGAAATCATCCCTTCCTCCATTAGAAGAAAATGATTTTAAAGTGGCGAGCGACCAAATTTTGAATAGCAAAGAAGCAGGTTCTGGAAGTGCTCTGACCCCAATTGAGCTGGTCAACAATGCCACGTCTCTCAAGAAATGCAACTTGATTGAAGGTGCAGAAAAATTGGAAGATTCCATGAAGTCTAGTTTTGAAAATGGTATGATTTTGGGTTCTGCATGTGGAAACCCTGGAGTATGCAACTCTGAAGGTATAGATGGAACTGAGTCCTCAGCTGATGCTCCAATTGAATTTTCTCCTTCAAATTCAGCAAGGGATTTAGATCCATCTCAAACATCAACATTGTATTGCCAAAGCTCCCTATTGGACAAGAGTGAAAATGGAGAGCTCATTGAGATGTACCCTGACAGATGTGGAAACTCGGAACAATCTCCAGATGTACCAGAAGCTTTAACTTGTCTAATGGGCAGCAGTGATGAGATTCATGAATTGGAAACTATGAGGAGAAACTGCAAACATTTAAACGGCAGCGATGGTGTTAACAGTGATTCCATAGTCCCTTCCTACATGGAAGGAATTTTACTCCTT TTCAAACAAGCCATTGACAGTGGCATGGCACTCGTGCTGAATGAAAATGAGTTTGCTGATGCCA ATTATGTGTATC AAAAGTCT GTTGCTTTTACA AA GACGGCTCCACGATACCTGGTACTCCGGCATACACCA AGGAAGTCCCA TGGTACCCAGAAGACTGAGCCAGCCA AGAATGTAAGGATAAATAAGCATCTTGAAGAACATAAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCACGCACGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGGTCCTTTATTAACCGAAGGTGTGTTGCGTTATCAACCTTGAATT AACGTGCAAAGTATATACATGTACA TTGATATGGGACGTATAAA ]
[+] EMBL CB628043 [ CGCTCCCTCCTCGTCCAAGCCCAGTACCCCATCTCACGGCTCCCATCCAACCTCCGCCTCTCCCTCTCCCACCACAAGCAACCAGCTGCCGTCGCCAAGCGCCGCCGAGCCCCCGCCCCCTCCCACCCGGCCTTCTCTTCGGTCATCCGCGGCCGTCCCAAGAAAGTCCCCATCCCGGAAAACGGCGAGCCAGCCGCCGGCGTCCGCGTCACTGAACGTGGCCTGGCCTATCATCTTGACGGCGCGCCCTTCGAGTTCCAGTACAGTTACACAGAGACGCCGCGCGCGCGCCCCGTCGCGCTCCGCGAGGCCCCGTTCCTGCCGTTCGGGCCTGAGGTAACGCCGCGCCCATGGACCGGGAGGAAGCCGCTCCCCAAGAGCCGCAAGGAACTGCCTGAGTTCGACTCCTTCATGCTCCCGCCGCCGGGCAAGAAGGGGGTGAAGCCCGTGCAGTCGCCGGGGCCATTCCTTGCCGGCACGGAGCCGAGGTACCAAGCGGCGTCCAGGGAGGAGGTCCTCGGGGAGCCTCTCACAAAGGAGGAGGTCGACGAGCTCGTCAAGGCGACCCTCAAGACCAAGCGGCAGCTTAATATCGGTAGAGATGGTCTAACACACAATATGTTGGAGAACATTCATTCGCATTGGAAGAGGAAGAGAGTGTGCAAGATAAAATGCAAAGGTGTATGCACGGTTGATATGGATAATGTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGT ]
[+] EMBL CB667088 [ GCCATTCCTTGCCGGCACGGAGCCGAGGTACCAAGCGGCGTCCAGGGAGGAGGTCCTCGGGGAGCCTCTCACAAAGGAGGAGGTCGACGAGCTCGTCAAGGCGACCCTCAAGACCAAGCGGCAGCTTAATATCGGTAGAGATGGTCTAACACACAATATGTTGGAGAACATTCATTCGCATTGGAAGAGGAAGAGAGTGTGCAAGATAAAATGCAAAGGTGTATGCACGGTTGATATGGATAATGTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGTAATTCATCATCAGGGTGGTGTGATATTTCTCTTTCGTGGTAGAAACTACAATTACAGAACTCGCCCAATCTATCCACTTATGCTTTGGAAACCTGCTGCACCAGTGTACCCCCGCTTGGTTAAAAAGATCCCAGACGGCTTAACTCCAGATGAGGCAGAAGATATGCGCAAGAGAGGACGTCAGTTACCACCAATTTGCAAACTCGGAAAAAATGGTGTTTATCTTAACCTCGTGAAGCAAGTTCGAGAAGCATTTGAAGCATGTGATCTTGTCCGGGTTGATTGCTCAGGTCTTAATAAAAGTGATTGCAGAAAGATAGGAGCTAAACTTAAGGATCTAGTTCCCTGTACCTTACTGTCTTTTGAGTTTGAACATATACTGATGTGGAGAGGAAATGATTGGAAATCATCCCTTCCTCCATTAGAAGAAAATGATTTTANAGTGGCGAGCGACCAAATTTTGAATAGCAAAGAAGCAGGTTCTGGAAGTGCTCTGACCCCAATTGAGCTGGTNCACAATG ]
[-] EMBL CB667089 [ AACTCTGAAGGTATAGATGGAACTGAGTCCTCAGCTGATGCTCCAATTGAATTTTCTCCTTCAAATTCAGCAAGGGATTTAGATCCATCTCAAACATCAACATTGTATTGCCAAAGCTCCCTATTGGACAAGAGTGAAAATGGAGAGCTCATTGAGATGTACCCTGACAGATGTGGAAACTCGGAACAATCTCCAGATGTACCAGAAGCTTTAACTTGTCTAATGGGCAGCAGTGATGAGATTCATGAATTGGAAACTATGAGGAGAAACTGCAAACATTTAAACGGCAGCGATGGTGTTAACAGTGATTCCATAGTCCCTTCCTACATGGAAGGAATTTTACTCCTT TTCAAACAAGCCATTGACAGTGGCATGGCACTCGTGCTGAATGAAAATGAGTTTGCTGATGCCA ATTATGTGTATC AAAAGTCT GTTGCTTTTACA AA GACGGCTCCACGATACCTGGTACTCCGGCATACACCA AGGAAGTCCCA TGGTACCCAGAAGACTGAGCCAGCCA AGAATGTAAGGATAAATAAGCATCTTGAAGAACATAAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCACGCACGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGGTCCTTTATTAACCGAAGGTGTGTTGCGTTATCAACCTTGAATT AACGTGCAAAGTATATACATGTACA TTGATATGGGACGTATAAAA ]
[-] EMBL CB628044 [ CATTGTATTGCCAAAGCTCCCTATTGGACAAGAGTGAAAATGGAGAGCTCATTGAGATGTACCCTGACAGATGTGGAAACTTGGAACAATCTCCAGATGTACCAGAAGCTTTAACTTGTCTAATGGGCAGCAGTGATGAGATTCATGAATTGGAAACTATGAGGAGAAACTGCAAACATTTAAACGGCAGCGATGGTGTTAACAGTGATTCCATAGTCCCTTCCTACATGGAAGGAATTTTACTCCTT TTCAAACAAGCCATTGACAGTGGCATGGCACTCGTTCTGAATGAAAATGAGTTTGCTGATGCCA ATTATGTGTATC AAAAGTCT GTTGCTTTTACA AA GACGGCTCCACGATACCTGGTACTCCGGCATACACCA AGGAAGTCCCA TGGTACCCAGAAGACTGAGCCAGCCA AGAATGTAAGGATAAATAAGCATCTTCAAGAACATAAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCATGCACGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGTTCCTTTATTAACTGAAGGTGTGTTGCGTTATCAACCTTGAATT AACGTGCAAAGTATATACATGTACA TTGATAGGGGACGTATAAAACTTTTCGTCAATTTGGTCATGCTGTGTAACTGATCACGCTTTCTGCATTGAAATGTTGAAAGTTAAGTAATATGGAACGGCGAAG ]
[+] EMBL BM038401 [ TGTT ACAGTGA TNCATAGTCCCTTCCTACATGGAAGGAA TTTACNCCTT TTCAAACAAGCCATTGACAGTGGCAT GCACTCGTTCTGAATGAAAATGAGTTTGCTGATGCC ATTATGTGTATC AAAGTCT GTTGCTTTTACA AA GACGGCTCCACGATACCTGGTACTCCGGCATACACCA AGGAAGTCCCACTGGTACCCAGAAGACTGAGCCAGCCA AGAATGTAAGGATAAATAAGCATCTTGAAGAACATAAAGTATCTGATCATGTCCAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGNNATGATCATGCACGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGTTCCTTTATTAACTGAAGGTGTGTTGCGTTATCAACCTTGAATT AACGTGC AAGTATACACATGTACATTTGATATGGGACGTAAAAAAaa ]
[+] EMBL BI812261 [ ACACGGATTCCATAG CCCTTCCTACATGGAAGGAATTTTACGCCTTGTGCAAACAA CCATTGACAGTGGCATGGCACTCGTTCTGAATGAAAATGAGTTTGCTGATGCCACATTATGTGTATC AAAAGTCT GTTGCTTTTACA AA GACGGCTCCACGATACCTGGTACTCCGGCATACACCA AGGAAGTCCCACTGGTACCCAGAAGACTGAGCCAGCCACAGAATGTAAGGATAAATAAGCATCTTGAAGAACATAAAGTATCTGATCATGTCCAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCATGCACGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGTTCCTTTATTAACTGAAGGTGTGTTGCGTTATCAACCTTGAATTCCACGTGCCAAGTATATACATGTACC TTGATATGGGACGTATAAAACTTTTCGTCCATTTGGTCATGCTGTGTAACTGATCACGCTTTCTGCATTGAAATGTTGGAATGTAA TAATATGGAACGGCGAAGCATTTTCAGACCAAAAAAAAAA]
[+] EMBL BI812578 [ gGTATCAAAAAAGTCTGGTTGCTTTTACACAAGGACGGCTCCACGATACCTGGTACTCCGGCATACACCACAGGAAGTCCCA TGGTACCCAGAAGACTGAGCCAGCCA AGAATGTAAGGATAAATAAGCATCTTGAAGAACATAAAGTATCTGATCATGTC AAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCATGCACGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGTTCCTTTATTAACTGAAGGTGTGTTGCGTTATCAACCTTGAATT AACGTGC AAGTATATACATGTACA TTGATATGGGACGTATAAAAaa ]
[+] EMBL BI803194 [ TCTTCAAGAACATAAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCATGCACGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGTTCCTTTATTAACTGAAGGTGTGTTGCGTTATCAACCTTGAATT AACGTGCCAAGTATATACATGTACA TTGATATGGGACGTATAAAACTTTTCGTCAATTTGGTCATGCTGTGTAACTGATCACGCTTTCT CATTGAAATGTTGGAATGTAATCCATATGGAACGGCGAAC ATTTTCAAA AAAA ]
consensusID : consensus_13078#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence
[GAAGAGCTCACTGAGATGTACCCTGACAGATGTGGAAACTCGGAACAATCTCAGNATGTACCAGAAGCTTTAACTTGTCTAATGGGCAGCAGTGATGAGATTCATGAATTGGAAACTATGAGGAGAAACTGCAAACATTTAAACGGCAGCGATGGTGTTAACAGTGATTCCATAGTCCCTTCCTACATGGAAGGAATTTTACTCCTTTTCAGACAAGCCATTGACAGTGGCATGGCACTCGTTTTGAATGAAAATGAGCTTGCTGATGCCAATTATGTGTATCAAAAGTCTGTTGCTTTTACAAAGACGGCTCCACGATACCTGGTACTCCGGCATACACCAAGGAAGTCCCATGGTACCCAGAAGACTGAGCCAGCCAAGAATGTAAGGATAAATAAGCATCTTGAAGAACATAAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCATGCCCGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGTTCCTTTATTAACTGAAGGTGTGTTGCGTTATCAACCTTGAATTAACGTGCAAAGTATATACATGTACATTGATATGGGACGTATAAAACTTTTTGTCAATTTGGTCAAAAAAAAAAAAAAAA]
[-] EMBL CA760252 [GAAGAGCTCACTGAGATGTACCCTGACAGATGTGGAAACTCGGAACAATCTCAGNATGTACCAGAAGCTTTAACTTGTCTAATGGGCAGCAGTGATGAGATTCATGAATTGGAAACTATGAGGAGAAACTGCAAACATTTAAACGGCAGCGATGGTGTTAACAGTGATTCCATAGTCCCTTCCTACATGGAAGGAATTTTACTCCTTTTCAGACAAGCCATTGACAGTGGCATGGCACTCGTTTTGAATGAAAATGAGCTTGCTGATGCCAATTATGTGTATCAAAAGTCTGTTGCTTTTACAAAGACGGCTCCACGATACCTGGTACTCCGGCATACACCAAGGAAGTCCCATGGTACCCAGAAGACTGAGCCAGCCAAGAATGTAAGGATAAATAAGCATCTTGAAGAACATAAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCATGCCCGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGTTCCTTTATTAACTGAAGGTGTGTTGCGTTATCAACCTTGAATTAACGTGCAAAGTATATACATGTACATTGATATGGGACGTATAAAACTTTTTGTCAATTTGGTCAAAAAAAAAAAAAAAA]
consensusID : consensus_13078#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 559 fasta sequence
[GAGGTCGACGAGCTCGTCAAGGCGACCCTCAAGACCAAGCGGCAGCTTAATATCGGTAGAGATGGTCTAACACACAATATGTTGGAGAACATTCATTCGCATTGGAAGAGGAAGAGAGTGTGCAAGATAAAATGCAAAGGTGTATGCACGGTTGATATGGATAATGTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGTAATTCATCATCAGGGTGGTGTGATATTTCTCTTTCGTGGTAGAAACTACAATTACAGAACTCGCCCAATCTATCCACTTATGCTTTGGAAACCTGCTGCACCAGTGTACCCCCGCTTGGTTAAAAAGATCCCAGACGGCTTAACTCCAGATGAGGCAGAAGATATGCGCAAGAGAGGACGTCAGTTACCACCAATTTGCAAACTCGGTAAGTCTCTTTGTTTCCATGTAGTTGACTCCTTTAACTGCCTTTCAAATTGTGGAATCTGCAAATTTCATAGTTAAAAGAATGAAAAATATATGCGCTAGTTGCCAAAGTTTATTTTTGAAAATATTAGTGCCTTTGCAGCCAAGAGTA]
[+] EMBL CF303640 [GAGGTCGACGAGCTCGTCAAGGCGACCCTCAAGACCAAGCGGCAGCTTAATATCGGTAGAGATGGTCTAACACACAATATGTTGGAGAACATTCATTCGCATTGGAAGAGGAAGAGAGTGTGCAAGATAAAATGCAAAGGTGTATGCACGGTTGATATGGATAATGTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGTAATTCATCATCAGGGTGGTGTGATATTTCTCTTTCGTGGTAGAAACTACAATTACAGAACTCGCCCAATCTATCCACTTATGCTTTGGAAACCTGCTGCACCAGTGTACCCCCGCTTGGTTAAAAAGATCCCAGACGGCTTAACTCCAGATGAGGCAGAAGATATGCGCAAGAGAGGACGTCAGTTACCACCAATTTGCAAACTCGGTAAGTCTCTTTGTTTCCATGTAGTTGACTCCTTTAACTGCCTTTCAAATTGTGGAATCTGCAAATTTCATAGTTAAAAGAATGAAAAATATATGCGCTAGTTGCCAAAGTTTATTTTTGAAAATATTAGTGCCTTTGCAGCCAAGAGTA]
[+] EMBL CF304958 [GAGGTCGACGAGCTCGTCAAGGCGACCCTCAAGACCAAGCGGCAGCTTAATATCGGTAGAGATGGTCTAACACACAATATGTTGGAGAACATTCATTCGCATTGGAAGAGGAAGAGAGTGTGCAAGATAAAATGCAAAGGTGTATGCACGGTTGATATGGATAATGTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGTAATTCATCATCAGGGTGGTGTGATATTTCTCTTTCGTGGTAGAAACTACAATTACAGAACTCGCCCAATCTATCCACTTATGCTTTGGAAACCTGCTGCACCAGTGTACCCCCGCTTGGTTAAAAAGATCCCAGACGGCTTAACTCCAGATGAGGCAGAAGATATGCGCAAGAGAGGACGTCAGTTACCACCAATTTGCAAACTCGGTAAGTCTCTTTGTTTCCATGTAGTTGACTCCTTTAACTGCCTTTCAAATTGTGGAATCTGCAAATTTCATAGTTAAAAGAATGAAAAATATAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13078#0 CCCCAACACCCATGGCAACTAGCCACCTCACCTCTCGCTCCCTCCTCGTCCAAGCCCAGT 60
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 ACCCCATCTCACGGCTCCCATCCAACCTCCGCCTCTCCCTCTCCCACCACAAGCAACCAG 120
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 CCGCCGTCGCCAAGCGCCGCCGAGCCCCCGCCCCCTCCCACCCGGCCTTCTCTTCGGTCA 180
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 TCCGCGGCCGTCCCAAGAAAGTCCCCATCCCGGAAAACGGCGAGCCAGCCGCCGGTGTCC 240
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 GCGTCACTGAACGTGGCCTGGCCTATCATCTTGACGGCGCGCCCTTCGAGTTCCAGTACA 300
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 GTTACACAGAGACGCCGCGCGCGCGCCCCGTCGCGCTCCGCGAGGCCCCGTTCCTGCCGT 360
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 TCGGGCCTGAGGTAACGCCGCGCCCATGGACCGGGAGGAAGCCGCTCCCCAAGAGCCGCA 420
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 AGGAACTGCCTGAGTTCGACTCCTTCATGCTCCCGCCGCCGGGCAAGAAGGGGGTGAAGC 480
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 CCGTGCAGTCGCCGGGGCCATTCCTTGCCGGCACGGAGCCGAGGTACCAAGCGGCGTCCA 540
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 GGGAGGAGGTCCTCGGGGAGCCTCTCACAAAGGAGGAGGTCGACGAGCTCGTCAAGGCGA 600
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 CCCTCAAGACCAAGCGGCAGCTTAATATCGGTAGAGATGGTCTAACACACAATATGTTGG 660
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 AGAACATTCATTCGCATTGGAAGAGGAAGAGAGTGTGCAAGATAAAATGCAAAGGTGTAT 720
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 GCACGGTTGATATGGATAATGTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGTAA 780
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 TTCATCATCAGGGTGGTGTGATATTTCTCTTTCGTGGTAGAAACTACAATTACAGAACTC 840
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 GCCCAATCTATCCACTTATGCTTTGGAAACCTGCTGCACCAGTGTACCCCCGCTTGGTTA 900
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 AAAAGATCCCAGACGGCTTAACTCCAGATGAGGCAGAAGATATGCGCAAGAGAGGACGTC 960
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 AGTTACCACCAATTTGCAAACTCGGAAAAAATGGTGTTTATCTTAACCTCGTGAAGCAAG 1020
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 TTCGAGAAGCATTTGAAGCATGTGATCTTGTCCGGGTTGATTGCTCAGGTCTTAATAAAA 1080
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 GTGATTGCAGAAAGATAGGAGCTAAACTTAAGGATCTAGTTCCCTGTACCTTACTGTCTT 1140
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 TTGAGTTTGAACATATACTGATGTGGAGAGGAAATGATTGGAAATCATCCCTTCCTCCAT 1200
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 TAGAAGAAAATGATTTTAAAGTGGCGAGCGACCAAATTTTGAATAGCAAAGAAGCAGGTT 1260
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 CTGGAAGTGCTCTGACCCCAATTGAGCTGGTCAACAATGCCACGTCTCTCAAGAAATGCA 1320
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 ACTTGATTGAAGGTGCAGAAAAATTGGAAGATTCCATGAAGTCTAGTTTTGAAAATGGTA 1380
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 TGATTTTGGGTTCTGCATGTGGAAACCCTGGAGTATGCAACTCTGAAGGTATAGATGGAA 1440
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 CTGAGTCCTCAGCTGATGCTCCAATTGAATTTTCTCCTTCAAATTCAGCAAGGGATTTAG 1500
consensus_13078#1 ------------------------------------------------------------
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 ATCCATCTCAAACATCAACATTGTATTGCCAAAGCTCCCTATTGGACAAGAGTGAAAATG 1560
consensus_13078#1 -----------------------------------------------------------G 1
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 GAGAGCTCATTGAGATGTACCCTGACAGATGTGGAAACTCGGAACAATCTCCAGATGTAC 1620
consensus_13078#1 AAGAGCTCACTGAGATGTACCCTGACAGATGTGGAAACTCGGAACAATCTCAGNATGTAC 61
consensus_13078#2 --GAGGTCGACGAGCT-CGTCAAGGCGACCCTCAAGACCAAGCGGCAGCTTAATATCGGT 57
*** ** *** * * * * * * ** * * ** **
consensus_13078#0 C-AGAAGCTTTAACTTGTCTAATGGGCAGCAGTGATGAGATTCAT--GAATTGGAAACTA 1677
consensus_13078#1 C-AGAAGCTTTAACTTGTCTAATGGGCAGCAGTGATGAGATTCAT--GAATTGGAAACTA 118
consensus_13078#2 AGAGATGGTCTAACACAC--AATATGTTG----GAGAACATTCATTCGCATTGGAAG--A 109
*** * * **** *** * * ** * ****** * ******* *
consensus_13078#0 TGAGGAGAAACTGCAAACATTTAAACGGCAGCGATGGTGTTAACAGT-GAT-TCCATAGT 1735
consensus_13078#1 TGAGGAGAAACTGCAAACATTTAAACGGCAGCGATGGTGTTAACAGT-GAT-TCCATAGT 176
consensus_13078#2 GGAAGAGAGTGTGCAAG---ATAAAATGCAAAGGTG-TATGCACGGTTGATATGGATAAT 165
** **** ***** **** *** * ** * * ** ** *** * *** *
consensus_13078#0 CCCTTCCTACATGGAAGGAATTTTACTCCTTTTCAAACAAGCCATTGACAG--TGGCATG 1793
consensus_13078#1 CCCTTCCTACATGGAAGGAATTTTACTCCTTTTCAGACAAGCCATTGACAG--TGGCATG 234
consensus_13078#2 GTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGTAATTCATCATCAGGGTGGTGTG 225
** ** ** * * * * * ** *** *** *** **
consensus_13078#0 GCACTCGTTCTGAATGAAAATGAGTTTGCTGATGCCAATTATGTGTATCAAAAGTCTGTT 1853
consensus_13078#1 GCACTCGTTTTGAATGAAAATGAGCTTGCTGATGCCAATTATGTGTATCAAAAGTCTGTT 294
consensus_13078#2 ATATTTCTCTTTCGTGGTA--GAAACTAC-------AATTA-------CAGAACTCGCCC 269
* * * * ** * ** * * ***** ** ** **
consensus_13078#0 GCTTTTACAAAGACGGCTCCACGATACCTGGTACTCCGGCATACACCAAGGAAGTCCCAT 1913
consensus_13078#1 GCTTTTACAAAGACGGCTCCACGATACCTGGTACTCCGGCATACACCAAGGAAGTCCCAT 354
consensus_13078#2 AATCTATCCACTTATGCTTTG-GAAACCTGCTGCACCAGTGTACCCCCGCTTGGTTAAAA 328
* * * * *** ** ***** * * ** * *** ** ** *
consensus_13078#0 GGTACCCAGAAGACTGAGCCAGCCAAGAATGTAAGGATAAATAAGCATCTTGAAGAACAT 1973
consensus_13078#1 GGTACCCAGAAGACTGAGCCAGCCAAGAATGTAAGGATAAATAAGCATCTTGAAGAACAT 414
consensus_13078#2 AGATCCCAGACGGCTTAACT--CCA--GATGAGGCAGAAGATATGCGCAAGAGAGGACGT 384
* ****** * ** * * *** *** * *** ** ** ** *
consensus_13078#0 AAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGA 2033
consensus_13078#1 AAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGA 474
consensus_13078#2 CAGTTACC--ACCAATTTGCAAACTCGGTAAGTCTCTTTGTT---TCCATGTAGTTGACT 439
* ** * * ** * *** * ** * ** * * ** * * **
consensus_13078#0 AATGATCATGCACGAGAATTTCTATCAGATGTTG-TTCCACAG---GGTACCTTAAGAGT 2089
consensus_13078#1 AATGATCATGCCCGAGAATTTCTATCAGATGTTG-TTCCACAG---GGTACCTTAAGAGT 530
consensus_13078#2 CCTTTAACTGCCTTTCAAATTGTGGAATCTGCAAATTTCATAGTTAAAAGAATGAAAAAT 499
* *** ** ** * * ** ** ** ** * ** * *
consensus_13078#0 AGATGAACT---TGCTAAATTACTGGCTTAAAGGTGATCGTTCCTTTATTAACTGAAGGT 2146
consensus_13078#1 AGATGAACT---TGCTAAATTACTGGCTTAAAGGTGATCGTTCCTTTATTAACTGAAGGT 587
consensus_13078#2 ATATGCGCTAGTTGCCAAAGTTTATTTTTGAAAATATTAGTGCCTTTGC-AGCCAAGAGT 558
* *** ** *** *** * ** ** * * ** ***** * * * **
consensus_13078#0 GTGTTGCGTTATCAACCTTGAATTAACGTGCAAAGTATATACATGTACATTGATATGGGA 2206
consensus_13078#1 GTGTTGCGTTATCAACCTTGAATTAACGTGCAAAGTATATACATGTACATTGATATGGGA 647
consensus_13078#2 A----------------------------------------------------------- 559
consensus_13078#0 CGTATAAAACTTTTCGTCAATTTGGTCATGCTGTGTAACTGATCACGCTTTCTGCATTGA 2266
consensus_13078#1 CGTATAAAACTTTTTGTCAATTTGGTCAAAAAAAAAAAAAAAA----------------- 690
consensus_13078#2 ------------------------------------------------------------
consensus_13078#0 AATGTTGGAATGTAAGTAATATGGAACGGCGAAGATTTTCAGAAAAAAAAAAA 2319
consensus_13078#1 -----------------------------------------------------
consensus_13078#2 -----------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||