These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13084#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2169 fasta sequence [TCCACCGATGGCTCTTTCCACGAGTCTCCTCTCCTGGTCCTCCTCCGACGACGACGACGGCGCCGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGGGGCTCGGGGTGAGGAGGAAGAGGAGCATGGAGGGGGTGTTCGGGTTCAGGGAGATGATGGGGGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTTTCAGAAGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCGCCTCCAAGACTGCTAGCAGGATTGAATCAGCAGCGTCCAAGGTATCAACTCGTGTTCCTGAATGAACTAAAGCCTGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGTCGAAAGACTCGAAAACAATCAGATGCGCATCGTCAGGTTCGGTCATCTTGCTTCTGCTAAGGTTGAAGTTGTAGTCCTCCACGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCCTGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCACAACTTCTCACCGGAAATCTGACACTGAAGCCCAATGGAGGGATTTGAAAAGCACTACCCGCCAATGTTGGATGACGAAGTTTGGCGTTTGGAAAAGATCGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTGATACTGTACAGAAGTTCTTACAATCATATTTTACGGACGAAAAGAAGCTTTTTCAGACTTTTAGCAAGATGTCACAGGCAGCTTGGAAAACCATCATAAGCCATGCCATGACATGTGAAGTCGGTGACGATCTTTGCTTGTATGAAGTGAAGGGCAACAACGTGGGACTTTTCTTCGATGCAATATATCAGCTTGTTGGGGTGAAGTTTGGTGATTCTTACAAGCCCATAAATGAGCTCGACGAAATAGAGCAGAGTGCAGTTGAAACAATGAAGCAATTGGCTTATGCGAATATAAGTGGTATTCAGTATGACCATAAGGTGGTCAACAACTATCCTGTACCGCTTCATAGGTTCCATTGTGGGGGAACTTCTATGTTGACTGACTTTATTCCTAAACAGCAGATCCCAACTTGTGGTCAATACAATTCAGCCCTGGCTGGTCAACCATTTGAATCAACGGAGAACTTTTCTTCATTCCAAGAAGCCTCTAATGCTTCAGTGGATATGTCAAGATTTGTGCAGGGTCAAACCTCCAACGTGCAGTTTAGCCAACAGTTGGGCATGGGCAATTTTATCCCACATCATTCAAATCAAGGAACATTCATACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCGAAAAAACATATTTTAATCCAAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACATAATGAGCGATCTCATTCACCTGAAGAATCATACAAGCGCTTTTCTCCAGATAATTTCCTCCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCAAGCAACAGCGAGAATTTCAGTAACCTGCTCAACCTATCAAGCAATGACCAAACCTCACAGCAAATTGCCGCTCCATTCCAGCCATCAAGAACAAACAGCTTTGACTCCAGCTCATGTGATCAGCTCATACAGAATTTCATTTCTCAGTTTTCTAGCAACGAAAGAGTTGCGGTGCCATTGTCCCCACGCAAGTGGGTCAAGATCAGGGCAGCGCTGAAGCTGGCATCTGTGGGTAGGCTCTCCAGAGCCTCGAGAAAGGCTTCGCATCGCCCCCCAGCAAGGCCAAGGCTTGTCCCAATAGTATGAGCCTGGTGAAATCAGGTTGTAAAAATTTTAGATTAAAGATCAATCCTGGTGTTGATGCAGAAGTTCTAGAGACATCTGGTCAACTGAAACTAATGA-TTTTGTCAAAAAGTTAGGTGTATGTAATCTGTACATAGTAGAGCCTGCTTGTACTTCATTTAGTGTTAGTATTTCCCAGCAGAGGATTCTGACCTCTTTGTTATCTCTGAATTTAGAACCATGTAAAC-AAAAGACCATGTAATGTATTCCTTTTTTGCACCTAATGATCCTTGAGAGAAATTTCCTTTTAAGAAAAAAA] [+] EMBL AK067865 [TCCACCGATGGCTCTTTCCACGAGTCTCCTCTCCTGGTCCTCCTCCGACGACGACGACGGCGCCGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGGGGCTCGGGGTGAGGAGGAAGAGGAGCATGGAGGGGGTGTTCGGGTTCAGGGAGATGATGGGGGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTTTCAGAAGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCGCCTCCAAGACTGCTAGCAGGATTGAATCAGCAGCGTCCAAGGTATCAACTCGTGTTCCTGAATGAACTAAAGCCTGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGTCGAAAGACTCGAAAACAATCAGATGCGCATCGTCAGGTTCGGTCATCTTGCTTCTGCTAAGGTTGAAGTTGTAGTCCTCCACGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCCTGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCACAACTTCTCACCGGAAATCTGACACTGAAGCCCAATGGAGGGATTTGAAAAGCACTACCCGCCAATGTTGGATGACGAAGTTTGGCGTTTGGAAAAGATCGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTGATACTGTACAGAAGTTCTTACAATCATATTTTACGGACGAAAAGAAGCTTTTTCAGACTTTTAGCAAGATGTCACAGGCAGCTTGGAAAACCATCATAAGCCATGCCATGACATGTGAAGTCGGTGACGATCTTTGCTTGTATGAAGTGAAGGGCAACAACGTGGGACTTTTCTTCGATGCAATATATCAGCTTGTTGGGGTGAAGTTTGGTGATTCTTACAAGCCCATAAATGAGCTCGACGAAATAGAGCAGAGTGCAGTTGAAACAATGAAGCAATTGGCTTATGCGAATATAAGTGGTATTCAGTATGACCATAAGGTGGTCAACAACTATCCTGTACCGCTTCATAGGTTCCATTGTGGGGGAACTTCTATGTTGACTGACTTTATTCCTAAACAGCAGATCCCAACTTGTGGTCAATACAATTCAGCCCTGGCTGGTCAACCATTTGAATCAACGGAGAACTTTTCTTCATTCCAAGAAGCCTCTAATGCTTCAGTGGATATGTCAAGATTTGTGCAGGGTCAAACCTCCAACGTGCAGTTTAGCCAACAGTTGGGCATGGGCAATTTTATCCCACATCATTCAAATCAAGGAACATTCATACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCGAAAAAACATATTTTAATCCAAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACATAATGAGCGATCTCATTCACCTGAAGAATCATACAAGCGCTTTTCTCCAGATAATTTCCTCCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCGAGCAACAGCGAGAATTTCAGTAACCTGCTCAACCTATCAAGCAATGACCAAACCTCACAGCAAATTGCCGCTCCATTCCAGCCATCAAGAACAAACAGCTTTGACTCCAGCTCATGTGATCAGCTCATACAGAATTTCATTTCTCAGTTTTCTAGCAACGAAAGAGTTGCGGTGCCATTGTCCCCACGCAAGTGGGTCAAGATCAGGGCAGCGCTGAAGCTGGCATCTGTGGGTAGGCTCTCCAGAGCCTCGAGAAAGGCTTCGCATCGCCCCCCAGCAAGGCCAAGGCTTGTCCCAATAGTATGAGCCTGGTGAAAACAGGTTGTAAAAAATTTAGATTAAAGATCGATCTTGGTGTTGATGCAGAAGTTCTAGAGACATCTGGTCAACTGAAACTAATGA TTTTGTCAAAAAGTTAGGTGTATGTAATCTGTACATAGTAGAGCCTGCTTGTACTTCATTTAGTGTTAGTATTTCCCAGCAGAGGATTCTGACCTCTTTGTTATCTCTGAATTTAGAACCATGTAAACAAAAAGACCATGTAATGTATTCCTTTTTTGCACCTAATGATCCTTGAGAGAA ] [-] EMBL CB635771 [ GTGCAGTGNAAACAATGAAGCAATTGGCTTATGCGAATATAAGTGGTATTCAGTATGACCATAAGATGGTCAACAACTATCCTGTACCGCTTCATAGGTTCCATTGTGGGGGAACTTCTATGTTGACTGACTTTATTCCTAAACAGCAGATCCCAACTTGTGGTCAATACAATTCAGCCCTGGCTGGTCAACCATTTGAATCAACGGAGAACTTTTCTTCATTCCATGAAGCCTCTAATGCTTCAGTGGATATGTCAAGATTTGTGCAGGGTCAAACCTCCAACGTGCAGTTTAGCCAACAGTTGGGCATGGGCAATTTTAACCCACATCATTCAAATCAAGGAACATTCATACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCCAAAAAACATATTTTAATCCAAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACATAATGAGCGATCTCATTCACCTGAAGAATCATACAAGCGCTTTTCTCCAGATAATTTCCTCCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCAAGCAACAGCGAGAATTTCAGTAACCTGCTCAACCTATCAAGCAATGACCAAACCTCACAGCAAATTGCCGCTCCATTCCAGCCATCAAGAACAAACAGCTTTGACTCCAGCTCATGTGATCAGCTCATACAGAATTTCATTTCTCAGTTTTCTAGCAACGAAGGAGTTGCGGTGCCACTGTCCCCACGCAAGTGGGTCAAGATCAGGGCAGCGCTGAAGCTGGCATCTGTGGGTAGGCg ] [+] EMBL OSS11549A [ TGCAGGGTCAAACCTCCAACGTGCAGTTTAGCCAACAGTTGGGCATGGGCAATTTTATCCCACATCATTCAAATCAAGGAACATTCATACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCGAAAAAACATATTTTAATCCAAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACATAATGAGCGATCTCATTCACCTGAAGAATCATACAAGCGCTTTTCTCCAGATAATTTCCTCCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCAAGCAACAGCGAGAATTTCAGTAACCTGCTCAACCTATCAGGCAATGACCAAACCTCACAGCAAATTGCCGGTCCATTCCAGCCATC AGGACAAc ] [-] EMBL CB638240 [ CCGCTCCATTCCAGCCATCAAGAACAAACAGCTTTGACTCCAGCTCATGTGATCAGCTCATACAGAATTTCATTTCTCAGTTTTCTAGCAACGAAAGAGTTGCGGTGCCATTGTCCCCACGCAAGTGGGTCAAGATCAGGGCAGCGCTGAAGCTGGCATCTGTGGGTAGGCTCTCCAGAGCCTCGAGAAAGGCTTCGCATCGCCCCCCAGCAAGGCCAAGGCTTGTCCCAATAGTATGAGCCTGGTGAAAACAGGTTGTAAAAAATTTAGATTAAAGATCGATCTTGGTGTTGATGCAGAAGTTCTAGAGACATCTGGTCAACTGAAACTAATGA TTTTGTCAAAAAGTTAGGTGTATGTAATCTGTACATAGTAGAGCCTGCTTGTACTTCATTTAGTGTTAGTATTTCCCAGCAGAGGATTCTGACCTCTTTGTTATCTCTGAATTTAGAACCATGTAAACAAAAAGACCATGTAATGTATTCCTTT ] [+] EMBL BQ907464 [ CAAGAACAAACAGCTTTGACTCCAGCTCATGTGATCAGCTCATACAGAATTTCATTTCTCAGTTTTCTAGCAATGAAGGAGTTCCGGTGCCATTGTCCCCACGCAAGTGGGTCAAGATCAGGGCAGCGCTGAAGCTGGCATCTGTGGGTAGGCTCTCCAGAGCCTCGAGAAAGGCTTCGCATCGCCCCCCAGCAAGGCCAAGGCTTGTCCCAATAGTATGAGCCTGGTGAAATCAGGTTGTAAAAATTTTAGATCAAAGATCAATCCTGGTGTTGATGCAGAAGTTCTAGAGACATCTGGTCAACTGAAACTAATGACTTTTGTCAAAAAGTTAGGTGTATGTAATCTGTACATAGTAGAGCCTGCTTGTACTTCATTTAGTGTTAGTATTTCCCAGCAGAGGATTCTGACCTCTTTGTTATCTCTGAATTTAGAACCATGTAAAC AAAAGACCATGTAATGTATTCCTTTTTTGCACCTAGTGATCCTTGAGAGAAATTTCCTTTTAAGAAAAA ] [+] EMBL BM039040 [ AGTT CGGTCCCATTGTCCCCACGCAAGTGGGTCAAGATCAGGCCAGCGCTGAAGCTGGCATCTGTGGGTAGGCTCTCCAGAGCCTCGAGAAAGGCTTCGCATCGCCCCCCAGCAAGGCCAAGGCTTGTCCC ATAGTATGAGCCTGGTGAAATCAGGTTGTAAAAATTTTAGATCAAAGATCAATCCTGGTGTTGATGCAGAAGTTCTAGAGACATCTGGTCAACTGAAACTAATGACTTTTGTCAAAAAGTTAGGTGTATGTAATCTGTACATAGTAGAGCCTGCTTGTACTTCATTTAGTGTTAGTATTTCCCAGCAGAGGATTCTGACCTCTTTGTTATCTCTGAATTTAGAACCATGTAAAC AAAAGACCATGTAATGTATTCCTTTTTTGCACCTAAaaaaaaaa ] [+] EMBL BI811838 [ TCCCCACGCAAGT GGTCAAGATCA GGCAGCGCTGAAGCTGGCATCTGT GGTAGGCTCTCCAGA CCTCGAGAAAGGCTTCGCATCGCCCCCCAGCAA GCCAAGGCTTGTCCC ATAGTATGAGCCTGGTGAAATCAGGTTGTAAAAATTTTAGA TCAAGATCAATCCTGGTGTTGATGCAGAAGTTCTAGAGACATCTGGTCAACTGAAACTAATGACTTTTGTC AAAAGTTAGGTGTATGTAATCTGTACATAGTAGAGCCTGCTTGTACTTCATTTAGTGTTAGTATTTCCCAGCAGAGGATTCTGACCTCTTTGTTATCTCTGAATTTAGAACCATGTAAAC AAAAGACCATGTAATGTATTCCTTTTTTGCACCTAGTGATCCTTGAGAGAAATTTCCTTTTAAAAAAAAAA] consensusID : consensus_13084#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1798 fasta sequence [CCACCGATGGCTCCTTCCACGAGTCTCCTCTCCTGGTCCTCCTCCGACGACGACGACGGCGCCGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGGGGCTCGGGGTGAGGAGGAAGAGGAGCATGGAGGGGGTGTTCGGGTTCAGGGAGATGATGGGGGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTTTCAGAAGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCGCCTCCAAGACTGCTAGCAGGATTGAATCAGCAGCGTCCAAGGTATCAACTCGTGTTCCTGAATGAACTAAAGCCTGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGTCGAAAGACTCGAAAACAATCAGATGCGCATCGTCAGGTTCGGTCATCTTGCTTCTGCTAAGGTTGAAGTTGTAGTCCTCCACGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCCTGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCACAACTTCTCACCGGAAATCTGACACTGAAGCTCAATGGAGGGGAAGCATTACTTGAGAATGCAACCTTCACTGATAACTCTAGCTTCACTAGCACTAAGAAGTTCAGGCTGGGTTTGAGGCTAGCCAACAATTCTGAAGATAGGGTTCTTGAAGGAATCACTGAACCTTTTCGTGTAAAGGAGCGTAGGGTGGAGGGATTTGAAAAGCACTACCCGCCAATGTTGGATGACGAAGTTTGGCGTTTGGAAAAGATCGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTGATACTGTACAGAAGTTCTTACAATCATATTTTACGGACGAAAAGAAGCTTTTTCAGACTTTTAGCAAGATGTCACAGGCAGCTTGGAAAACCATCATAAGCCATGCCATGACATGTGAAGTCGGTGACGATCTTTGCTTGTATGAAGTGAAGGGCAACAACGTGGGACTTTTCTTCGATGCAATATATCAGCTTGTTGGGGTGAAGTTTGGTGATTCTTACAAGCCCATAAATGAGCTCGACGAAATAGAGCAGAGTGCAGTTGAAACAATGAAGCAATTGGCTTATGCGAATATAAGTGGTATTCAGTATGACCATAAGATGGTCAACAACTATCCTGTACCGCTTCATAGGTTCCATTGTGGGGGAACTTCTATGTTGACTGACTTTATTCCTAAACAGCAGATCCCAACTTGTGGTCAATACAATTCAGCCCTGGCTGGTCAACCATTTGAATCAACGGAGAACTTTTCTTCATTCCAAGAAGCCTCTAATGCTTCAGTGGATATGTCAAGATTTGTGCAGGGTCAAACCTCCAACGTGCAGTTTAGCCAACAGTTGGGCATGGGCAATTTTATCCCACATCATTCAAATCAAGGAACATTCATACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCGAAAAAACATATTTTAATCCAAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACATAATGAGCGATCTCATTCACCTGAAGAATCATACAAGCGCTTTTCTCCAGATAATTTCCTCCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCAAGCAACAGCGA-GAATTTCAGTAACCTGCTCAACCTATCAAGCAATGACCAAACCTCACAGCAAATTGCCGCTCCAT] [+] EMBL AK067126 [CCACCGATGGCTCCTTCCACGAGTCTCCTCTCCTGGTCCTCCTCCGACGACGACGACGGCGCCGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGGGGCTCGGGGTGAGGAGGAAGAGGAGCATGGAGGGGGTGTTCGGGTTCAGGGAGATGATGGGGGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTTTCAGAAGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCGCCTCCAAGACTGCTAGCAGGATTGAATCAGCAGCGTCCAAGGTATCAACTCGTGTTCCTGAATGAACTAAAGCCTGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGTCGAAAGACTCGAAAACAATCAGATGCGCATCGTCAGGTTCGGTCATCTTGCTTCTGCTAAGGTTGAAGTTGTAGTCCTCCACGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCCTGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCACAACTTCTCACCGGAAATCTGACACTGAAGCTCAATGGAGGGGAAGCATTACTTGAGAATGCAACCTTCACTGATAACTCTAGCTTCACTAGCACTAAGAAGTTCAGGCTGGGTTTGAGGCTAGCCAACAATTCTGAAGATAGGGTTCTTGAAGGAATCACTGAACCTTTTCGTGTAAAGGAGCGTAGGGTGGAGGGATTTGAAAAGCACTACCCGCCAATGTTGGATGACGAAGTTTGGCGTTTGGAAAAGATCGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTGATACTGTACAGAAGTTCTTACAATCATATTTTACGGACGAAAAGAAGCTTTTTCAGACTTTTAGCAAGATGTCACAGGCAGCTTGGAAAACCATCATAAGCCATGCCATGACATGTGAAGTCGGTGACGATCTTTGCTTGTATGAAGTGAAGGGCAACAACGTGGGACTTTTCTTCGATGCAATATATCAGCTTGTTGGGGTGAAGTTTGGTGATTCTTACAAGCCCATAAATGAGCTCGACGAAATAGAGCAGAGTGCAGTTGAAACAATGAAGCAATTGGCTTATGCGAATATAAGTGGTATTCAGTATGACCATAAGATGGTCAACAACTATCCTGTACCGCTTCATAGGTTCCATTGTGGGGGAACTTCTATGTTGACTGACTTTATTCCTAAACAGCAGATCCCAACTTGTGGTCAATACAATTCAGCCCTGGCTGGTCAACCATTTGAATCAACGGAGAACTTTTCTTCATTCCAAGAAGCCTCTAATGCTTCAGTGGATATGTCAAGATTTGTGCAGGGTCAAACCTCCAACGTGCAGTTTAGCCAACAGTTGGGCATGGGCAATTTTATCCCACATCATTCAAATCAAGGAACATTCATACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCGAAAAAACATATTTTAATCCAAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACATAATGAGCGATCTCATTCACCTGAAGAATCATACAAGCGCTTTTCTCCAGATAATTTCCTCCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCAAGCAACAGCGA GAATTTCAGTAACCTGCTCAACCTATCAAGCAATGACCAAACCTCACAGCAAATTGCCGCTCCAT] [+] EMBL CF304188 [ TAAGGTTGAAGTTGTAGTCCTCCACGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCCTGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCACAACTTCTCACCGGAAATCTGACACTGAAGCTCAATGGAGGGGAAGCATTACTTGAGAATGCAACCTTCACTGATAACTCTAGCTTCACTAGCACTAAGAAGTTCAGGCTGGGTTTGAGGCTAGCCAACAATTCTGAAGATAGGGTTCTTGAAGGAATCACTGAACCTTTTCGTGTAAAGGAGCGTAGGGTGGAGGGATTTGAAAAGCACTACCCGCCAATGTTGGATGACGAAGTTTGGCGTTTGGAAAAGATCGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTGATACTGTACAGAAGTTCTTACAATCATATTTTACGGACGAAAAGAAGCTTTTTCAGACTTTTAGCAAGATGTCACAGGCAGCTTGGAAAACCATCATAAGCCATGCCATGACATGTGAAGTCGGTGACGATCTTTGCTTGTATGAAGTGAAGGGCAACAACGTGGGACTTTTCTTCGATGCAATATATCAGCTTGTTGGGGTGAAGTTTGGTGATTCTTACAAGCCCATAAATGAGC ] [+] EMBL OSS11552A [ TGCAGGGTCAAACCTCCAACGTGCAGTTTAGCCAACAGTTGGGCATGGGCAATTTTATCCCACATCATTCAAATCAAGGAACATTCATACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCGAAAAAACATATTTTAATCCAAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACATAATGAGCGATCTCATTCACCTGAAGAATCATACAAGCGCTTTTCTCCAGATAATTTCCTCCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCAAGCAACAGCGAGGAATTTCAGTAACCTGCTCAACCTATCAGGCAATGACCAAACCTTACAGC ] consensusID : consensus_13084#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 974 fasta sequence [TGGTCCTTCTCCTCCTCCGACGACGGCGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGGGGCTTGGGGTGAGGAGGAAGAGGAGCATGGAGGGGGTGTTCGGGTTCAGGGAGATGATGGGGGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTTTCAGAGGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCCCCTCCAAGACTGCTAGTAGGCTTGAATCAGCAGCGTCCAAGGTATCAACTCATGTTCCTGAATGGATTAAAGCCTGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGTCGAAAGACTCGAAAACAATCAGATGCGCATCGTCAGGTTCGGTCATCTTGCTTCTGCTAAGGTTGAAGTTGTAGTCCTCCATGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCCTGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCGCAACTTCTCACTGGAAATCTGACACTGAAGCTCAATGGAGGGGAAGCATTACTTGAGAATGCAACCTTCACTGATAACTCTAGCTTCACTAGCACTAAGAAGTTCAGGCTGGGTTTGAGGCTAGCCAACAATTCTGAAGATAGGGTTCTTGAAGGAATCACTGAACCTTTTCGTGTAAAGGAGCGTAGGGTGGAGGGTATGCCATTGTCCCTAAGATTCAGATTGTTTGTTTCTTCAGAAATGTCTTTTGGACCTTATAGCTGAGACTAATAATATGCAACTTACTATTTTTGCAGGATTTGAAAAGCACTACCCGCCAATGTTGGATGACGAAGTTTGGCGTTTGGAAAAGATCGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTGATACTGTGCAGAAGTTCTTACAAT] [+] EMBL CB633828 [TGGTCCTTCTCCTCCTCCGACGACGGCGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGGGGCTTGGGGTGAGGAGGAAGAGGAGCATGGAGGGGGTGTTCGGGTTCAGGGAGATGATGGGGGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTTTCAGAGGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCCCCTCCAAGACTGCTAGTAGGCTTGAATCAGCAGCGTCCAAGGTATCAACTCATGTTCCTGAATGGATTAAAGCCTGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGTCGAAAGACTCGAAAACAATCAGATGCGCATCGTCAGGTTCGGTCATCTTGCTTCTGCTAAGGTTGAAGTTGTAGTCCTCCATGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCCTGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCGCAACTTCTCACTGGAAATCTGACACTGAAGCTCAATGGAGGGGAAGCATTACTTGAGAATGCAACCTTCACTGATAACTCTAGCTTCACTAGCACTAAGAAGTTCAGGCTGGGTTTGAGGCTAGCCAACAATTCTGAAGATAGGGTTCTTGAAGGAATCACTGAACCT ] [+] EMBL CB635770 [ TTTCAGAGGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCCCCTCCAAGACTGCTAGTAGGCTTGAATCAGCAGCGTCCAAGGTATCAACTCATGTTCCTGAATGGATTAAAGCCTGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGTCGAAAGACTCGAAAACAATCAGATGCGCATCGTCAGGTTCGGTCATCTTGCTTCTGCTAAGGTTGAAGTTGT TCCTCCATGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCCTGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCGCAACTTCTCACTGGAAATCTGACACTGAAGCTCAATGGAGGGGAAGCATTACTTGAGAATGCAACCTTCACTGATAACTCTAGCTTCACTAGCACTAAGAAGTTCAGGCTGGGTTTGAGGCTAGCCAACAATTCTGAAGATAGGGTTCTTGAAGGAATCACTGAACCTTTTCGTGTAAAGGAGCGTAGGGTGGAGGGTATGCCATTGTCCCTAAGATTCAGATTGTTTGTTTCTTCAGAAATGTCTTTTGGACCTTATAGCTGAGACTAATAATATGCAACTTACTATTTTTGCAGGATTTGAAAAGCACTACCCGCCAATGTTGGATGACGAAGTTTGGCGTTTGGAAAAGATCGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTGATACTGTGCAGAAGTTCTTACAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13084#0 TCCACCGATGGCTCTTTCCACGAGTCTCCTCTCCTGGTCCTCCTCCGACGACGACGACGG 60 consensus_13084#1 -CCACCGATGGCTCCTTCCACGAGTCTCCTCTCCTGGTCCTCCTCCGACGACGACGACGG 59 consensus_13084#2 ----------------------------------TGGTCCTTCTCCTCCTCCGACGACGG 26 ******* **** * ********* consensus_13084#0 CGCCGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGGG 120 consensus_13084#1 CGCCGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGGG 119 consensus_13084#2 ---CGGCGCCGGCGGCGAGCTGTCCCGCCCTCGCAGGCGGTGGCGGGCGCTTGTCCTGGG 83 ********************************************************* consensus_13084#0 GCTCGGGGTGAGGAGGAAGAGGAGCATGGAGGGGGTGTTCGGGTTCAGGGAGATGATGGG 180 consensus_13084#1 GCTCGGGGTGAGGAGGAAGAGGAGCATGGAGGGGGTGTTCGGGTTCAGGGAGATGATGGG 179 consensus_13084#2 GCTTGGGGTGAGGAGGAAGAGGAGCATGGAGGGGGTGTTCGGGTTCAGGGAGATGATGGG 143 *** ******************************************************** consensus_13084#0 GGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTTTC 240 consensus_13084#1 GGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTTTC 239 consensus_13084#2 GGAGGAGTTCATGGGCATGTTCCTCCCCTTCTTTGGCAAGATGGTTCAGAAAGTGGTTTC 203 ************************************************************ consensus_13084#0 AGAAGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCGCCTCCAAGACTGCT 300 consensus_13084#1 AGAAGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCGCCTCCAAGACTGCT 299 consensus_13084#2 AGAGGAAGTAGAGAAAGCAATTTTCAGACAAGTCAGCACACCAGCCCCTCCAAGACTGCT 263 *** ***************************************** ************** consensus_13084#0 AGCAGGATTGAATCAGCAGCGTCCAAGGTATCAACTCGTGTTCCTGAATGAACTAAAGCC 360 consensus_13084#1 AGCAGGATTGAATCAGCAGCGTCCAAGGTATCAACTCGTGTTCCTGAATGAACTAAAGCC 359 consensus_13084#2 AGTAGGCTTGAATCAGCAGCGTCCAAGGTATCAACTCATGTTCCTGAATGGATTAAAGCC 323 ** *** ****************************** ************ * ******* consensus_13084#0 TGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGT 420 consensus_13084#1 TGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGT 419 consensus_13084#2 TGTTTACACACTGATGAAATTAGAAGCCAAGGATGGACCGGGTCTTAAGGTGGCTATAGT 383 ************************************************************ consensus_13084#0 CGAAAGACTCGAAAACAATCAGATGCGCATCGTCAGGTTCGGTCATCTTGCTTCTGCTAA 480 consensus_13084#1 CGAAAGACTCGAAAACAATCAGATGCGCATCGTCAGGTTCGGTCATCTTGCTTCTGCTAA 479 consensus_13084#2 CGAAAGACTCGAAAACAATCAGATGCGCATCGTCAGGTTCGGTCATCTTGCTTCTGCTAA 443 ************************************************************ consensus_13084#0 GGTTGAAGTTGTAGTCCTCCACGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCC 540 consensus_13084#1 GGTTGAAGTTGTAGTCCTCCACGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCC 539 consensus_13084#2 GGTTGAAGTTGTAGTCCTCCATGGCAACTTTAATGCTAAAAATGAGGAACAATGGACCCC 503 ********************* ************************************** consensus_13084#0 TGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCACAACTTCTCACCGG 600 consensus_13084#1 TGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCACAACTTCTCACCGG 599 consensus_13084#2 TGAAGACTTCAGCAAGCAGATAGTATGCGGGCGAGAGAAAAGCGCGCAACTTCTCACTGG 563 ********************************************* *********** ** consensus_13084#0 AAATCTGACACTGAAGCCCAATGGAGGG-------------------------------- 628 consensus_13084#1 AAATCTGACACTGAAGCTCAATGGAGGGGAAGCATTACTTGAGAATGCAACCTTCACTGA 659 consensus_13084#2 AAATCTGACACTGAAGCTCAATGGAGGG-------------------------------- 591 ***************** ********** consensus_13084#0 ------------------------------------------------------------ consensus_13084#1 TAACTCTAGCTTCACTAGCACTAAGAAGTTCAGGCTGGGTTTGAGGCTAGCCAACAATTC 719 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 ------------------------------------------------------------ consensus_13084#1 TGAAGATAGGGTTCTTGAAGGAATCACTGAACCTTTTCGTGTAAAGGAGCGTAGGGTGGA 779 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 ---ATTTGAAAAGCACTACCCGCCAATGTTGGATGACGAAGTTTGGCGTTTGGAAAAGAT 685 consensus_13084#1 GGGATTTGAAAAGCACTACCCGCCAATGTTGGATGACGAAGTTTGGCGTTTGGAAAAGAT 839 consensus_13084#2 ---------GAAGCATTACTTGAGAATGC---------AACCTTCACT----GATAACTC 629 ***** *** * **** ** ** * ** ** consensus_13084#0 CGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTGATACTGTACAGAA 745 consensus_13084#1 CGGCCGCAATGGAGCTCACCACCAGGCCTTGACAAACAGTGGAGTTGATACTGTACAGAA 899 consensus_13084#2 TAGCTTCACTAG----CACTAAGAAGTTCAGGC------TGGGTTTGAGGCTAGCCAACA 679 ** ** * * *** * * * * * *** **** ** ** * consensus_13084#0 GTTCTTACAATCATATTTTACGGACGAA--AAGAAGCTTTTTCAGACTTTTAGCAAGATG 803 consensus_13084#1 GTTCTTACAATCATATTTTACGGACGAA--AAGAAGCTTTTTCAGACTTTTAGCAAGATG 957 consensus_13084#2 ATTCTGAAGATAGGGTTCT-TGAAGGAATCACTGAACCTTTTCG----TGTAAAGGAGCG 734 **** * ** ** * * * *** * * * ***** * ** * consensus_13084#0 TCACAGGCAGCTTGGAAAACCATCATAAGCCATGCCATGACATGTGAAGTCGGTGACGAT 863 consensus_13084#1 TCACAGGCAGCTTGGAAAACCATCATAAGCCATGCCATGACATGTGAAGTCGGTGACGAT 1017 consensus_13084#2 TAGGGTGGAGGGTATGCCATTGTCCCTAAGATTCAGATTGTTTGTTTCTTCAGAAATGTC 794 * * ** * * ** * * ** *** ** * * * consensus_13084#0 CTTTGCTTGTATGAAGTGAAGGGCAACAACGTGGGACTTTTCTTCGATGCAATATATCA- 922 consensus_13084#1 CTTTGCTTGTATGAAGTGAAGGGCAACAACGTGGGACTTTTCTTCGATGCAATATATCA- 1076 consensus_13084#2 TTTTGGACCT-TATAGCTGAGACTAATAATATGCAACTTACTATTTTTGCAGGATTTGAA 853 **** * * ** ** ** ** ** **** * **** ** * * consensus_13084#0 --GCTTGTTGGGGTGAAGTTTGGTGATTCTTACAAGCCCATAAATGAGCTCGAC-GAAAT 979 consensus_13084#1 --GCTTGTTGGGGTGAAGTTTGGTGATTCTTACAAGCCCATAAATGAGCTCGAC-GAAAT 1133 consensus_13084#2 AAGCACTACCCGCCAATGTTGGATGACGAAGTTTGGCGTTTGGAAAAGATCGGCCGCAAT 913 ** * * *** * *** ** * * ** *** * * *** consensus_13084#0 AGAGCAGAGTGCAGTTGAAACAATGAAGCAATTGGCTTATGCGAATATAAGTGGTATTCA 1039 consensus_13084#1 AGAGCAGAGTGCAGTTGAAACAATGAAGCAATTGGCTTATGCGAATATAAGTGGTATTCA 1193 consensus_13084#2 GGAGCTCACCACC----AGGCCTTGA--CAAACAGTGGAGTTGATACTGTGCAGAAGTTC 967 **** * * * * *** *** * * ** * * * * * consensus_13084#0 GTATGACCATAAGGTGGTCAACAACTATCCTGTACCGCTTCATAGGTTCCATTGTGGGGG 1099 consensus_13084#1 GTATGACCATAAGATGGTCAACAACTATCCTGTACCGCTTCATAGGTTCCATTGTGGGGG 1253 consensus_13084#2 TTACAAT----------------------------------------------------- 974 ** * consensus_13084#0 AACTTCTATGTTGACTGACTTTATTCCTAAACAGCAGATCCCAACTTGTGGTCAATACAA 1159 consensus_13084#1 AACTTCTATGTTGACTGACTTTATTCCTAAACAGCAGATCCCAACTTGTGGTCAATACAA 1313 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 TTCAGCCCTGGCTGGTCAACCATTTGAATCAACGGAGAACTTTTCTTCATTCCAAGAAGC 1219 consensus_13084#1 TTCAGCCCTGGCTGGTCAACCATTTGAATCAACGGAGAACTTTTCTTCATTCCAAGAAGC 1373 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 CTCTAATGCTTCAGTGGATATGTCAAGATTTGTGCAGGGTCAAACCTCCAACGTGCAGTT 1279 consensus_13084#1 CTCTAATGCTTCAGTGGATATGTCAAGATTTGTGCAGGGTCAAACCTCCAACGTGCAGTT 1433 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 TAGCCAACAGTTGGGCATGGGCAATTTTATCCCACATCATTCAAATCAAGGAACATTCAT 1339 consensus_13084#1 TAGCCAACAGTTGGGCATGGGCAATTTTATCCCACATCATTCAAATCAAGGAACATTCAT 1493 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 ACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCGAAAAAACATATTTTAATCC 1399 consensus_13084#1 ACCCAGACCAAGAATCACTCCTCTGTGTATACCTAATACCGAAAAAACATATTTTAATCC 1553 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 AAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACA 1459 consensus_13084#1 AAACGCTCATAGCAGCATCCAGGCTGATCATGCTGCCACACGAATTGGCCAGTATGCACA 1613 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 TAATGAGCGATCTCATTCACCTGAAGAATCATACAAGCGCTTTTCTCCAGATAATTTCCT 1519 consensus_13084#1 TAATGAGCGATCTCATTCACCTGAAGAATCATACAAGCGCTTTTCTCCAGATAATTTCCT 1673 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 CCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCAAGCAACAGCGA 1579 consensus_13084#1 CCATACAGATGAAGTTGTGGCTTTGATGCAACCTCACTTAGTGCCTCCAAGCAACAGCGA 1733 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 GAATTTCAGTAACCTGCTCAACCTATCAAGCAATGACCAAACCTCACAGCAAATTGCCGC 1639 consensus_13084#1 GAATTTCAGTAACCTGCTCAACCTATCAAGCAATGACCAAACCTCACAGCAAATTGCCGC 1793 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 TCCATTCCAGCCATCAAGAACAAACAGCTTTGACTCCAGCTCATGTGATCAGCTCATACA 1699 consensus_13084#1 TCCAT------------------------------------------------------- 1798 consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 GAATTTCATTTCTCAGTTTTCTAGCAACGAAAGAGTTGCGGTGCCATTGTCCCCACGCAA 1759 consensus_13084#1 ------------------------------------------------------------ consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 GTGGGTCAAGATCAGGGCAGCGCTGAAGCTGGCATCTGTGGGTAGGCTCTCCAGAGCCTC 1819 consensus_13084#1 ------------------------------------------------------------ consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 GAGAAAGGCTTCGCATCGCCCCCCAGCAAGGCCAAGGCTTGTCCCAATAGTATGAGCCTG 1879 consensus_13084#1 ------------------------------------------------------------ consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 GTGAAATCAGGTTGTAAAAATTTTAGATTAAAGATCAATCCTGGTGTTGATGCAGAAGTT 1939 consensus_13084#1 ------------------------------------------------------------ consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 CTAGAGACATCTGGTCAACTGAAACTAATGATTTTGTCAAAAAGTTAGGTGTATGTAATC 1999 consensus_13084#1 ------------------------------------------------------------ consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 TGTACATAGTAGAGCCTGCTTGTACTTCATTTAGTGTTAGTATTTCCCAGCAGAGGATTC 2059 consensus_13084#1 ------------------------------------------------------------ consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 TGACCTCTTTGTTATCTCTGAATTTAGAACCATGTAAACAAAAGACCATGTAATGTATTC 2119 consensus_13084#1 ------------------------------------------------------------ consensus_13084#2 ------------------------------------------------------------ consensus_13084#0 CTTTTTTGCACCTAATGATCCTTGAGAGAAATTTCCTTTTAAGAAAAAAA 2169 consensus_13084#1 -------------------------------------------------- consensus_13084#2 -------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||