cluster # 1309

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Oryza sativa
cluster # 1309 cluster # 1309 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1309#0 length = 773 sequences # 2

consensusID : consensus_1309#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 773
fasta sequence

                              [GCCTTGGTTGCTTCGGAATCTCACCACCCAACCCGTTCGGATTAGATAGCCCGCTTCCTCCTCTCTCTCTCAGCTCACCACACCTCGAGTCGCCGCCGCCGCCGCCGCTGCTGCTGCTTACCTCCTCCGCGCCGCGCACTCCTTGCACTAGCCCATGGCGACGGCTATGATGGCTGCGACCGCCACCTCGTGCTCCCCTCGACGCCAAGATCCGTGCCGAGCTCGGCGGCGTCAAGGACGCGTCCGAGGAGGTGCGGCAGCTGGAGGAGCAGGCCGCCGCCGTGCTGAAGGCGGCACGCGCCGAGATCGCCGCGGCGCTCAACAAGATGA-AGAAGGAGACCACCCAGGAGCTGGAGGCGAAGCTGGACGAGGGGC-GCCGCCGCGTCGAGGCCGAGCTCGTGGAGGCGCTCGCCAACCTCGAGGCGCAGAAGGAGGAGGCCGTCAAGGCGCTCGACGCCCAGATCGCCTCCCTCAGCGACGAGATCGTCAAGAAGGTGCTCCCATCCGCGTAATGGCCGCCCCGCCGCCGGCCGTTCTT-GCCTCCCAAACACCAACCATCTCTCGTAAAGATTTTCTCCGTGTTTTATCCGTGTGTATACGCTGCTTGTCCTAAGAATGTAATTTCAGTGAACTTCTCGTGATAAGTATAAAATCATGATCCTTTTGGCTAGAAATTGGATTGAAATTATAAACTGCTTTAATAAGTGCTTACTGCATTATTTGTGAGGATTGTGAACTGAAACATATATCATAAGTTTTTTACACTTCCAAAA]

[+] EMBL CF326237             [GCCTTGGTTGCTTCGGAATCTCACCACCCAACCCGTTCGGATTAGATAGCCCGCTTCCTCCTCTCTCTCTCAGCTCACCACACCTCGAGTCGCCGCCGCCGCCGCCGCTGCTGCTGCTTACCTCCTCCGCGCCGCGCACTCCTTGCACTAGCCCATGGCGACGGCTATGATGGCTGCGACCGCCACCTCGTGCTCCCCTCGACGCCAAGATCCGTGCCGAGCTCGGCGGCGTCAAGGACGCGTCCGAGGAGGTGCGGCAGCTGGAGGAGCAGGCCGCCGCCGTGCTGAAGGCGGCACGCGCCGAGATCGCCGCGGCGCTCAACAAGATGA AGAAGGAGACCACCCAGGAGCTGGAGGCGAAGCTGGACGAGGGGC GCCGCCGCGTCGAGGCCGAGCTCGTGGAGGCGCTCGCCAACCTCGAGGCGCAGAAGGAGGAGGCCGTCAAGGCGCTCGACGCCCAGATCGCCTCCCTCAGCGACGAGATCGTCAAGAAGGTGCTCCCATCCGCGTAATGGCCGCCCCGCCGCCGGCCGTTCTT GCCTCCCAAACACCAAC                                                                                                                                                                                                                          ]
[+] EMBL BM420419             [                                                                                                                                                                                                                                                                                                        CGCGCCGAGATCGCCGCGGCGCTCAACAAGATGAGAGAAGGAGACCACCCAGGAGCTGGAGGCGAAGCTGGACGAGGGGCAGCCGCCGCGTCGAGGCCGAGCTCGTGGAGGCGCTCGCCAACCTCGAGGCGCAGAAGGAGGAGGCCGTCAAGGCGCTCGACGCCCAGATCGCCTCCCTCAGCGACGAGATCGTCAAGAAGGTGCTCCCATCCGCGTAATGGCCGCCCCGCCGCCGGCCGTTCTTGGCCTCCC AACACCAACCATCTCTCGTAAAGATTTTCTCCGTGTTTTATCCGTGTGTATACGCTGCTTGTCCTAAGAATGTAATTTCAGTGAACTTCTCGTGATAAGTATAAAATCATGATCCTTTTGGCTAGAAATTGGATTGAAATTATAAACTGCTTTAATAAGTGCTTACTGCATTATTTGTGAGGATTGTGAACTGAAACATATATCATAAGTTTTTTACACTTCCAAAA]




>consensus_1309#0
GCCTTGGTTGCTTCGGAATCTCACCACCCAACCCGTTCGGATTAGATAGCCCGCTTCCTC
CTCTCTCTCTCAGCTCACCACACCTCGAGTCGCCGCCGCCGCCGCCGCTGCTGCTGCTTA
CCTCCTCCGCGCCGCGCACTCCTTGCACTAGCCCATGGCGACGGCTATGATGGCTGCGAC
CGCCACCTCGTGCTCCCCTCGACGCCAAGATCCGTGCCGAGCTCGGCGGCGTCAAGGACG
CGTCCGAGGAGGTGCGGCAGCTGGAGGAGCAGGCCGCCGCCGTGCTGAAGGCGGCACGCG
CCGAGATCGCCGCGGCGCTCAACAAGATGAAGAAGGAGACCACCCAGGAGCTGGAGGCGA
AGCTGGACGAGGGGCGCCGCCGCGTCGAGGCCGAGCTCGTGGAGGCGCTCGCCAACCTCG
AGGCGCAGAAGGAGGAGGCCGTCAAGGCGCTCGACGCCCAGATCGCCTCCCTCAGCGACG
AGATCGTCAAGAAGGTGCTCCCATCCGCGTAATGGCCGCCCCGCCGCCGGCCGTTCTTGC
CTCCCAAACACCAACCATCTCTCGTAAAGATTTTCTCCGTGTTTTATCCGTGTGTATACG
CTGCTTGTCCTAAGAATGTAATTTCAGTGAACTTCTCGTGATAAGTATAAAATCATGATC
CTTTTGGCTAGAAATTGGATTGAAATTATAAACTGCTTTAATAAGTGCTTACTGCATTAT
TTGTGAGGATTGTGAACTGAAACATATATCATAAGTTTTTTACACTTCCAAAA

clustalw multiple alignements is not computed in this case