These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13092#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3157 fasta sequence [AAGAAGAATAAGGTAGGACACACACACAACTCCACTAGATTTAATGACCCCCCCTTAAAATTAGGAGAAAATTAGGCGAAAAACAAATCCAAAAGCGAAGACCCAAGAGGAAGAAGGTTAATCAAACCAAGACAAGAGAGAGAGAGAGAGAAAGCAAGCACAGATAGAGAGAGAAACAAGAGAGAGAAGAAGAAGAAGAAGAAGAAGGGTAGAAGAGGACGCCGAGAGCGGCAGAGGGGTGAGGCCATGTGTACGCCATGGGCGTGCGCTGCGTGGACGTCGTGACACCTGCCGCCGCCCGCGCACCGCCATCGCCATGCCCATGCCGCCGCAATGCGCCTCCTCAAAACCCCCTTCTCCTCCTCCTCCTCCTCATCCCCACGAGCACGAGGTTTGCCACCGCCGCTGCCGCTTCTTGCCTTGCTTTGATCCGCCGCCGCGGGAGGCCTCTTCTTGATTCTTGATTTTGCAGGTAGGGGACGACATGGCGGAGGAGGCGCCGCCGCCGCCGCCGCCGCCCAAGCTCCTCTACATTGCCGTCTCCGACGCCGCCGCTCGCCGCGCCTTCCGCTACACGCGCCCCGTGCTTCAGGGCACCGTCCAACTCATGGGATGCAAGGCTCGCCATGCCTTCAAGATTAGCAAGAGGGTGTTCAATGTGATGAGGAGTGAATTCTTGGATGCATCCAAATCAGATACTGCAGATAATGAAGAAAATGCCCCTTCCCTTGTAAAAGATGTTGAGATGCTGAAGCCCAAAATTTTGGAAGCAACTCTTAGTAGCATACCCTTCGAGTTATACAAGACCCAAACAACCATCGTTGTTTCTAGGGAGAAGTTCCTAAGTGTTGTATGTGATGCCCTCTCTTCATACAAGTATGTGGGGCCAAACCAGAAGGCTGACTTTCTTCTTGCTTGCAGGTAACATGTTTTTCCTTGTTTCTGCATTTATAAATTCAGAAGTTACAATGAGTTACCAATCATCAGTTCATTACAGCCAATGGAAAGCTACCTGAATGCATTGAAATAACAATGGTTTTGTGCAACTGTGCATTTTCCAATTGTTCTGTTCAGAATTAAGGAGAGAAAGGAATCAGTGACAGTACTCTTATGTGGGACTAGCGGATGCGGCAAATCTACGCTATCATCTTTGTTGGTATGTTTATCACTTACGCGAACCATACAATTCCGGATGAGTGAATGCTCTACTGTACCAGCAACATAGTAGTAGTTTGTTACATGTTAAAGTATAATGCAAAACGTCTGTAGAACAAAATCCACTTGAAAAAAAAAATCCTTTCTAGACCTATCAATTACCTCATTGCTTTCAGAAGATTGTATCGCTTACCGAACAATGAATGATTCTGGGTCTTGATTAATACTTGATATGGTCTGTCTGTTTTTCTCAGGGTAGTAGATTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGCCATATGATGAGAGGCTTTACGGATGAGAAGCAAAATCCTCTTCTCTATGCATCAACCTATCATGCAGGCGAATGCTTAGACCCTGTTGCAGTTGCTCAGGCAAAGGCAAAACGGAAGGCACAGAAGCTTGACATTGTTTCTCATCCTAATACCAATGAAGGCAGAGACGACACTTCAGATGATAAAGCTCATCATGGATCCTCCGAATTGCCTCCTAGAACGGAGTTGATCGGCAGCAAGCAAATGGCAATAGAAGGGTTCAAGGCGCAAAGCGAGATGGTAATAGACAGCCTGGACAGATTAATTACGTCCTGGGAGGAGCAGAAACAATCTGTAATTGTTGAGGGAGTTCATCTAAGCCTCAATTTTGTGATGGGGCTAATGAAGAAACACCCTTCCATAATACCATTTATGGTATACATTGCGAATGAGGAGAAACACATGGAGCGATTCGCTGTACGTGCAAAGTACATGACACTAGACCCAGCGAAGAACAGATATATCAAATACATCC-GGAACATCAGAGCAATCCAGGACTACCTTTGTAACCGTGCAGACAAGCATCT-GGTGCCCAAGATTAACAATACTAATGTTGACCAGAGTGTGGC-GGCCATACACGCCAC-GGTTTTCAGCTGTCTTCGCAGGCGAGAAGCTGGGGAGCAGTTGTATGACCTCAACACAAACACTGTAGCTGTAGTGAATGAGGAATACAGGAACCAGCGTGCTGCTAACTCACTGGGTTCCAAGGGAATGTTTCAGTTGATACAAAGACAGGGATCTTCAAGAAATTTGATGGCTATCCTTAATACTGACGGTAGTGTCACCAAAGCTTGGCATGTGGATAAAAACAATGGCAATGGAAGTCTCGATGGTACAAGCAGTGACAAATCAACAAAAAATCCCATGTATGATACATTTGGGAAGGCGGAGCCAGTCAATCTCCAGTTCGGATCTTTCGGGATCAGTGCATGGATGAGTGACACAGGTGGCACCAGCCATACAGGAAGTGTAGATGACTTGAGAGCTGATGGCATTGAAACGGGCGGCAGATATTATTCCTCATGCTGCAGTTCACCAAAGGTGTCAGATTGCCCTTCAAAAGAGCTTATGGAGGATGATTATTCAGTTTTTGGTAGCGAAGAAGATGCTGATGATCCTCCTGATGCTGGAACTGACGAAGACCTAACTGATGAAGAAAGAGATATGCACGAGATAGAAGCAGGCTCTGTTGATGAACACT-CCACCAAGTCCGACGAGGAATACGACGATCTGGCAATGCAGGATGTGATGGAGAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCAGGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAATGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCACAGAACTGCCGTGTGCATAGTGCCTCCGGTGTCAAAGCAACTGTTGTTGGTCCAGATGTGCTCTGAACTCGGTTGTTATGTATCCTGATGAGCTTACCTCCATGACTGTAACTGTAAGAGAGGATCTGCTGCTTGTCTAAGCAATACAGATCACTTAGAATCCGTGTAATCCAATAACTCTTGAAAAGATGAAATAATAAAGGGTGAATAAATAGTTTGATACAAAAAA] [+] EMBL AK100921 [AAGAAGAATAAGGTAGGACACACACACAACTCCACTAGATTTAATGACCCCCCCTTAAAATTAGGAGAAAATTAGGCGAAAAACAAATCCAAAAGCGAAGACCCAAGAGGAAGAAGGTTAATCAAACCAAGACAAGAGAGAGAGAGAGAGAAAGCAAGCACAGATAGAGAGAGAAACAAGAGAGAGAAGAAGAAGAAGAAGAAGAAGGGTAGAAGAGGACGCCGAGAGCGGCAGAGGGGTGAGGCCATGTGTACGCCATGGGCGTGCGCTGCGTGGACGTCGTGACACCTGCCGCCGCCCGCGCACCGCCATCGCCATGCCCATGCCGCCGCAATGCGCCTCCTCAAAACCCCCTTCTCCTCCTCCTCCTCCTCATCCCCACGAGCACGAGGTTTGCCACCGCCGCTGCCGCTTCTTGCCTTGCTTTGATCCGCCGCCGCGGGAGGCCTCTTCTTGATTCTTGATTTTGCAGGTAGGGGACGACATGGCGGAGGAGGCGCCGCCGCCGCCGCCGCCGCCCAAGCTCCTCTACATTGCCGTCTCCGACGCCGCCGCTCGCCGCGCCTTCCGCTACACGCGCCCCGTGCTTCAGGGCACCGTCCAACTCATGGGATGCAAGGCTCGCCATGCCTTCAAGATTAGCAAGAGGGTGTTCAATGTGATGAGGAGTGAATTCTTGGATGCATCCAAATCAGATACTGCAGATAATGAAGAAAATGCCCCTTCCCTTGTAAAAGATGTTGAGATGCTGAAGCCCAAAATTTTGGAAGCAACTCTTAGTAGCATACCCTTCGAGTTATACAAGACCCAAACAACCATCGTTGTTTCTAGGGAGAAGTTCCTAAGTGTTGTATGTGATGCCCTCTCTTCATACAAGTATGTGGGGCCAAACCAGAAGGCTGACTTTCTTCTTGCTTGCAGGTAACATGTTTTTCCTTGTTTCTGCATTTATAAATTCAGAAGTTACAATGAGTTACCAATCATCAGTTCATTACAGCCAATGGAAAGCTACCTGAATGCATTGAAATAACAATGGTTTTGTGCAACTGTGCATTTTCCAATTGTTCTGTTCAGAATTAAGGAGAGAAAGGAATCAGTGACAGTACTCTTATGTGGGACTAGCGGATGCGGCAAATCTACGCTATCATCTTTGTTGGTATGTTTATCACTTACGCGAACCATACAATTCCGGATGAGTGAATGCTCTACTGTACCAGCAACATAGTAGTAGTTTGTTACATGTTAAAGTATAATGCAAAACGTCTGTAGAACAAAATCCACTTGAAAAAAAAAATCCTTTCTAGACCTATCAATTACCTCATTGCTTTCAGAAGATTGTATCGCTTACCGAACAATGAATGATTCTGGGTCTTGATTAATACTTGATATGGTCTGTCTGTTTTTCTCAGGGTAGTAGATTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGCCATATGATGAGAGGCTTTACGGATGAGAAGCAAAATCCTCTTCTCTATGCATCAACCTATCATGCAGGCGAATGCTTAGACCCTGTTGCAGTTGCTCAGGCAAAGGCAAAACGGAAGGCACAGAAGCTTGACATTGTTTCTCATCCTAATACCAATGAAGGCAGAGACGACACTTCAGATGATAAAGCTCATCATGGATCCTCCGAATTGCCTCCTAGAACGGAGTTGATCGGCAGCAAGCAAATGGCAATAGAAGGGTTCAAGGCGCAAAGCGAGATGGTAATAGACAGCCTGGACAGATTAATTACGTCCTGGGAGGAGCAGAAACAATCTGTAATTGTTGAGGGAGTTCATCTAAGCCTCAATTTTGTGATGGGGCTAATGAAGAAACACCCTTCCATAATACCATTTATGGTATACATTGCGAATGAGGAGAAACACATGGAGCGATTCGCTGTACGTGCAAAGTACATGACACTAGACCCAGCGAAGAACAGATATATCAAATACATCC GGAACATCAGAGCAATCCAGGACTACCTTTGTAACCGTGCAGACAAGCATCT GGTGCCCAAGATTAACAATACTAATGTTGACCAGAGTGTGGC GGCCATACACGCCAC GGTTTTCAGCTGTCTTCGCAGGCGAGAAGCTGGGGAGCAGTTGTATGACCTCAACACAAACACTGTAGCTGTAGTGAATGAGGAATACAGGAACCAGCGTGCTGCTAACTCACTGGGTTCCAAGGGAATGTTTCAGTTGATACAAAGACAGGGATCTTCAAGAAATTTGATGGCTATCCTTAATACTGACGGTAGTGTCACCAAAGCTTGGCATGTGGATAAAAACAATGGCAATGGAAGTCTCGATGGTACAAGCAGTGACAAATCAACAAAAAATCCCATGTATGATACATTTGGGAAGGCGGAGCCAGTCAATCTCCAGTTCGGATCTTTCGGGATCAGTGCATGGATGAGTGACACAGGTGGCACCAGCCATACAGGAAGTGTAGATGACTTGAGAGCTGATGGCATTGAAACGGGCGGCAGATATTATTCCTCATGCTGCAGTTCACCAAAGGTGTCAGATTGCCCTTCAAAAGAGCTTATGGAGGATGATTATTCAGTTTTTGGTAGCGAAGAAGATGCTGATGATCCTCCTGATGCTGGAACTGACGAAGACCTAACTGATGAAGAAAGAGATATGCACGAGATAGAAGCAGGCTCTGTTGATGAACACT CCACCAAGTCCGACGAGGAATACGACGATCTGGCAATGCAGGATGTGATGGAGAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCAGGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAATGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCACAGAACTGCCGTGTGCATAGTGCCTCCGGTGTCAAAGCAACTGTTGTTGGTCCAGATGTGCTCTGAACTCGGTTGTTATGTATCCTGATGAGCTTACCTCCATGACTGTAACTGTAAGAGAGGATCTGCTGCTTGTCTAAGCAATACAGATCACTTAGAATCCGTGTAATCCAATAACTCTTGAAAAGATGAAATAATAAAGGGTGAATAA ] [+] EMBL C73096 [ GCAATAGAAGGGTTCAAGGCGCAAAG GAGATGGTAATAGACAGCCTGGACAGATTAATTACGTCCTGGGAGGAGCAGAAACAATCTGTAATTGTTGAGGGAGTTCATCTAAGCCTCAATTTTGTGATGGGGCTAATGAAGAAACACCCTTCCATAATACCATTTATGGTATACATTGCGAATGAGGAGAAACACATGGAGCGATTCGCTGTACGTGCAAAGTACATGACACTAGACCCAGCGAAGAACAGATATATCAAATACATCCGGGAACATCAGAGCAATCCAGGACTACCTTTGTNACCGTGCAGACAAGCATCTGGGTGCCCCAGATTTACAATACTAATGTTGACCAGAGTGTGGCGGGCCATA NCGCCACGGGNTTTC ] [-] EMBL CB647510 [ TCCCATGTATGATACATTTGGGAAGGCGGAGCCAGTCAATCTCCAGTTCGGATCTTTCGGGATCAGTGCATGGATGAGTGACACAGGTGGCACCAGCCATACAGGAAGTGTAGATGACTTGAGAGCTGATGGCATTGAAACGGGCGGCAGATATTATTCCTCATGCTGCAGTTCACCAAAGGTGTCAGATTGCCCTTCAAAAGAGCTTATGGAGGATGATTATTCAGTTTTTGGTAGCGAAGAAGATGCTGATGATCCTCCTGATGCTGGAACTGACGAAGACCTAACTGATGAAGAAAGAGATATGCACGAGATAGAAGCAGGCTCTGTTGATGAACACT CCACCAAGTCCGACGAGGAATACGACGATCTGGCAATGCAGGATGTGATGGAGAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCAGGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAATGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCACAGAACTGCCGTGTGCATAGTGCCTCCGGTGTCAAAGCAACTGTTGTTGGTCCAGATGTGCTCTGAACTCGGTTGTTATGTATCCTGATGAGCTTACCTCCATGACTGTAACTGTAAGAGAGGATCTGCTGCTTGTCTAAGCAATACAGATCACTTAGAATCCGTGTAATCCAATAACTCTTGAATAAAGGGAATAATAAAGGGTGAAT ] [-] EMBL CB628893 [ GTATGATACATTTGGGAAGGCGGAGCCAGTCAATCTCCAGTTCGGATCTTTCGGGATCAGTGCATGGATGAGTGACACAGGTGGCACCAGCCATACAGGAAGTGTAGATGACTTGAGAGCTGATGGCATTGAAACGGGCGGCAGATATTATTCCTCATGCTGCAGTTCACCAAAGGTGTCAGATTGCCCTTCAAAAGAGCTTATGGAGGATGATTATTCAGTTTTTGGTAGCGAAGAAGATGCTGATGATCCTCCTGATGCTGGAACTGACGAAGACCTAACTGATGAAGAAAGAGATATGCACGAGATAGAAGCAGGCTCTGTTGATGAACACT CCACCAAGTCCGACGAGGAATACGACGATCTGGCAATGCAGGATGTGATGGAGAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCAGGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAATGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCACAGAACTGCCGTGTGCATAGTGCCTCCGGTGTCAAAGCAACTGTTGTTGGTCCAGATGTGCTCTGAACTCGGTTGTTATGTATCCTGATGAGCTTACCTCCATGACTGTAACTGTAAGAGAGGATCTGCTGCTTGTTTAAGCAATACAGATCACTTAGAATCCGTGTAATCCAATAACTCTTGAAAAGATGAAATAAGAAAGGGTGAATAAATA ] [+] EMBL AU075371 [ CAGTGCATGGATGAGTGACACA GTGGCACCAGCCATACAGGAAGTGTAGATGACTTGAGAGCTGATGGCATTGAAACGGGCGGCAGATATTATTCCTCATGCTGCAGTTCACCAAAGGTGTCAGATTGCCCTTCAAAAGAGCTTATGGAGGATGATTATTCAGTTTTTGGTAGCGAAGAAGATGCTGATGATCCTCCTGATGCTGGAACTGACGAAGACCTAACTGATGAAGAAAGAGATATGCACGAGATAGAAGCAGGCTCTGTTGATGAACACT CCACCAAGTCCGACGAGGAATACGACGATCTGGCAATGCAGGATGTGATGGAGAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCAGGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAATGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCACAGAACTGCCGTGTGCATAGTG CTCCGGTGTCAAAGCAACTGTTGTTGGTCCAGATGTGCTCTGAACTCGGTTGTTATGTATCCTGATGAGCTTACCTCCATGACTGTAACTGTAAGAGAGGATCTGCTGCTTGTCTAAGCAATACAGATCACTTAGAATCCGTGTAATCCAATAACTCTTGAAAAa ] [-] EMBL CB647379 [ GGATGAGTGACACAGGTGGCACCAGCCATACAGGAAGTGTAGATGACTTGAGAGCTGATGGCATTGAAACGGGCGGCAGATATTATTCCTCATGCTGCAGTTCACCAAAGGTGTCAGATTGCCCTTCAAAAGAGCTTATGGAGGATGATTATTCAGTTTTTGGTAGCGAAGAAGATGCTGATGATCCTCCTGATGCTGGAACTGACGAAGACCTAACTGATGAAGAAAGAGATATGCACGAGATAGAAGCAGGCTCTGTTGATGAACACT CCACCAAGTCCGACGAGGAATACGACGATCTGGCAATGCAGGATGTGATGGAGAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCAGGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAATGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCACAGAACTGCCGTGTGCATAGTGCCTCCGGTGTCAAAGCAACTGTTGTTGGTCCAGATGTGCTCTGAACTCGGTTGTTATGTATCCTGATGAGCTTACCTCCATGACTGTAACTGTAAGAGAGGATCTGCTGCTTGTCTAAGCAATACAGATCACTTAGAATCCGTGTAATCCAATAACTCTTGAAAAGAGGAAATAATAAAGGGTGAATAAATAGTTTGATAC ] [-] EMBL CF319205 [ AGATATGCACGAGATAGAAGCAGGCTCTGTTGATGAACACTCCCACCAAGTCCGACGAGGAATACGACGATCTGGCAATGCAGGATGTGATGGAGAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCAGGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAATGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCACAGAACTGCCGTGTGCATAGTGCCTCCGGTGTCAAAGCAACTGTTGTTGGTCCAGATGTGCTCTGAACTCGGTTGTTATGTATCCTGATGAGCTTACCTCCATGACTGTAACTGTAAGAGAGGATCTGCTGCTTGTCTAAGCAATACAGATCACTTAGAATCCGTGTAATCCAATAACTCTTGAAAAGATGAAATAATAAAGGGTGAATAAATAGTTTGATACAAAAAA] [+] EMBL AU070649 [ GGATGTGATGGAGAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCAGGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAATGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCACAGAACTGCCGTGTGCATAGTGCCTCCGGTGTCAAAGCAACTGTTGTTGGTCCAGATGTGCTCTGAACTCGGTTGTTATGTATCCTGATGAGCTTACCTCCATGACTGTAACTGTAAGAGAGGATCTGCTGCTTGTCTAAGCAATACAGATCACTTAGAATCCGTGTAATCCAATAACTCTTGAAAAGATGAAATAATAAAGGGTGAATAAATAGTTTGATACAAAAA ] consensusID : consensus_13092#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 838 fasta sequence [CCACTAGATTTAATGACCCCCCCTTAAAATTAGGAGAAAATTAGGCGAAAAACAAATCCAAAAGCGAAGACCCAAGAGGAAGAAGGTTAATCAAACCAAGACAAGAGAGAGAGAGAGAAAGCAAGCACAGATAGAGAGAGAAACAAGAGAGAGAAGAAGAAGAAGAAGAAGGGTAGAAGAGGACGCCGAGAGCGGCAGAGGGGTGAGGCCATGTGTACGCCATGGGCGTGCGCTGCGTGGACGTCGTGACACCTGCCGCCGCCCGCGCACCGCCATCGCCATGCCCATGCCGCCGCAATGCGCCTCCTCAAAACCCCCTT---CTCCTCCTCCTCCTCCTCATCCCCACGAGCACGAGGTAGGGGACGACATGGCGGAGGAGGCGCCGCCGCCGCCGCCGCCGCCCAAGCTCCTCTACATTGCCGTCTCCGACGCCGCCGCTCGCCGCGCCTTCCGCTACACGCGCCCCGTGCTTCATGGCACCCTCCAACTCATGGGATGCAAGGCTCGCCATGCCTTCAAGATTAGCAAGAGGGTGTTCAATGTGATGAGGAGTGAATTCTTGGATGCATCCAAATCTCATACTGCAGATAATGAAGAAAATGCCCCTTCCCTTGTAAAAGATGATGAGATGCTGAAGCCCAATATTTTGGAAGCAACTCTTAGTAGCATACCCTTCGAGTTATACAAGACCCAAACAACCATCGTTGTTTCTAGGGAGAAGTTCCTAAGTGTTGTATGTGATGCCCTCTCTTCATACAAGTATGTGGGGCCAAACCAGAAGGCTGACTTTCTTCTTGCTTGCAGAATTAAGGACAGAAAGGAATCAGTGACAGTACTC] [+] EMBL CB628892 [CCACTAGATTTAATGACCCCCCCTTAAAATTAGGAGAAAATTAGGCGAAAAACAAATCCAAAAGCGAAGACCCAAGAGGAAGAAGGTTAATCAAACCAAGACAAGAGAGAGAGAGAGAAAGCAAGCACAGATAGAGAGAGAAACAAGAGAGAGAAGAAGAAGAAGAAGAAGGGTAGAAGAGGACGCCGAGAGCGGCAGAGGGGTGAGGCCATGTGTACGCCATGGGCGTGCGCTGCGTGGACGTCGTGACACCTGCCGCCGCCCGCGCACCGCCATCGCCATGCCCATGCCGCCGCAATGCGCCTCCTCAAAACCCCCTTCTCCTCCTCCTCCTCCTCCTCATCCCCACGAGCACGAGGTAGGGGACGACATGGCGGAGGAGGCGCCGCCGCCGCCGTCGCCGCCCGAGCTCCTCTACATTGCCGTCTCCGACGCCGCCGGTCGGCGCGCCTTCCGATACACGCGCCCCGTGCTTCATGGCACCCTCCAACTCATGGGAGGCAAGGCTCGCCATGCCTTCAAGATTAGCAAGAGGGTGTTCAATGTGATGAGGAGAGAATTCTTGGATGCATCCAAATCTCATACTGCAGATAATGAAGAAAATGCCCCTTCCCTTGTAAAAGATGATGAGATGCTGAAGCCCAATATTTTG ] [+] EMBL CB647378 [ AGAGA AGAACATGAAGAAGAAGAAGGGTAGAAGAGGACGCCGAGAGCGGCAGAGGGGTGAGGCCATGTGTACGCCATGGGCGTGCGCTGCGTGGACGTCGTGACACCTGCCGCCGCCCGCGCACCGCCATCGCCATGCCCATGCCGCCGCAATGCGCCTCCTCAAAACCCCCTT CTCCTCCTCCACCTCCTCATCCCCACGAGCACGAGGTAGGGGACGACATGGCGGAGGAGGCGCCGCCGCCGCCGCCGCCGCCCAAGCTCCTCTACATTGCCGTCTCCGACGCCGCCGCTCGCCGCGCCTTCCGCTACACGCGCCCCGTGCTTCAGGGCACCCTCCAACTCATGGGATGCAAGGCTCGCCATGCCTTCAAGATTAGCAAGAGGGTGTTCAATGTGATGAGGAGTGAATTCTTGGATGCATCCAAATCAGATACTGCAGATAATGAAGAAAATGCCCCTTCCCTTGTAAAAGATGTTGAGATGCTGAAGCCCAAAATTTTGGAAGCAACTCTTAGTAGCATACCCTTCGAGTTATACAAGACCCAAACAACCATCGTTGTTTCTAGGGAGAAGTTCCTAAGTGTTGTATGTGATGCCCTCTCTTCATACAAGTATGTGGGGCCAAACCAGAAGGCTGACTTTCTTCTTGCTTGCAGAATTAAGGACAGAAAGGAATCAGTGACAGTACTC] [+] EMBL CB647509 [ AGGGTAGAAGAGGACGCCGAGAGCGGCAGAGGGGTGAGGCCATGTGTACGCCATGGGCGTGCGCTGCGTGGACGTCGTGACACCTGCCGCCGCCCGCGCACCGCCATCGCCATGCCCATGCCGCCGCAATGCGCCTCCTCAAAACCCCCTT CTCCTCCTCCTCCTCCTCGTCCCCACGAGCACGAGGTATGGGACGACATGGCGGAGGAGGCGCCGCCGCCGCCGCCGCCGCCCAAGCTCCTCTAGATTGCCGTCTCCGACGCCGCCGCTCGCCGCGCCTTCTGCTTGATCCTCCCCGTGCTTGATGGCATCCTCCTGCTCCTGGGATGCTAGGCTCGCCATGCCTTCAAGATTATCCAGAGGGTGTTCCATGTGATGAGGAGTGACTTCT ] consensusID : consensus_13092#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 529 fasta sequence [GACACTGAATGGACTGAAGGAGTAGAAACGGCAGCAAGCAAATGGCAATAGAAGGGTTCGAGGCGCAAAGCGAGATGGTAATAGACAGCCTGGACAGATTAATTACGTCCTGGGAGGAGCAGAAACAATCTGTAATTGTTGAGGGAGTTCATCTAAGCCTCAATTTTGTGATGGGGCTAATGAAGAAACACCCTTCCATAATACCATTTATGGTATACATTGCGAATGAGGAGAAACACATGGAGCGATTCGCTGTACGTGCAAAGTACATGACACTAGACCCAGCGAAGAACAGATATATCAAATACATCCGGAACATCAGAGCAATCCAGGACTACCTTTGTAACCGTGCAGACAAGCATCTGGTGCCCAAGATTAACAATACTAATGTTGACCAGAGTGTGGCGGCCATACACGCCACGGTTTTCAGCTGTCTTCGCAGGCGAGAAGCTGGGGAGCAGTTGTATGACCTCAACACAAACACTGTAGCTGTAGTGAATGAGGAATACAGGAACCAGCGTGCTGCTAA] [+] EMBL CF319204 [GACACTGAATGGACTGAAGGAGTAGAAACGGCAGCAAGCAAATGGCAATAGAAGGGTTCGAGGCGCAAAGCGAGATGGTAATAGACAGCCTGGACAGATTAATTACGTCCTGGGAGGAGCAGAAACAATCTGTAATTGTTGAGGGAGTTCATCTAAGCCTCAATTTTGTGATGGGGCTAATGAAGAAACACCCTTCCATAATACCATTTATGGTATACATTGCGAATGAGGAGAAACACATGGAGCGATTCGCTGTACGTGCAAAGTACATGACACTAGACCCAGCGAAGAACAGATATATCAAATACATCCGGAACATCAGAGCAATCCAGGACTACCTTTGTAACCGTGCAGACAAGCATCTGGTGCCCAAGATTAACAATACTAATGTTGACCAGAGTGTGGCGGCCATACACGCCACGGTTTTCAGCTGTCTTCGCAGGCGAGAAGCTGGGGAGCAGTTGTATGACCTCAACACAAACACTGTAGCTGTAGTGAATGAGGAATACAGGAACCAGCGTGCTGCTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13092#0 AAGAAGAATAAGGTAGGACACACACACAACTCCACTAGATTTAATGACCCCCCCTTAAAA 60 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TTAGGAGAAAATTAGGCGAAAAACAAATCCAAAAGCGAAGACCCAAGAGGAAGAAGGTTA 120 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 ATCAAACCAAGACAAGAGAGAGAGAGAGAGAAAGCAAGCACAGATAGAGAGAGAAACAAG 180 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 AGAGAGAAGAAGAAGAAGAAGAAGAAGGGTAGAAGAGGACGCCGAGAGCGGCAGAGGGGT 240 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 GAGGCCATGTGTACGCCATGGGCGTGCGCTGCGTGGACGTCGTGACACCTGCCGCCGCCC 300 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 GCGCACCGCCATCGCCATGCCCATGCCGCCGCAATGCGCCTCCTCAAAACCCCCTTCTCC 360 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TCCTCCTCCTCCTCATCCCCACGAGCACGAGGTTTGCCACCGCCGCTGCCGCTTCTTGCC 420 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TTGCTTTGATCCGCCGCCGCGGGAGGCCTCTTCTTGATTCTTGATTTTGCAGGTAGGGGA 480 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 CGACATGGCGGAGGAGGCGCCGCCGCCGCCGCCGCCGCCCAAGCTCCTCTACATTGCCGT 540 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 CTCCGACGCCGCCGCTCGCCGCGCCTTCCGCTACACGCGCCCCGTGCTTCAGGGCACCGT 600 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 CCAACTCATGGGATGCAAGGCTCGCCATGCCTTCAAGATTAGCAAGAGGGTGTTCAATGT 660 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 GATGAGGAGTGAATTCTTGGATGCATCCAAATCAGATACTGCAGATAATGAAGAAAATGC 720 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 CCCTTCCCTTGTAAAAGATGTTGAGATGCTGAAGCCCAAAATTTTGGAAGCAACTCTTAG 780 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TAGCATACCCTTCGAGTTATACAAGACCCAAACAACCATCGTTGTTTCTAGGGAGAAGTT 840 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 CCTAAGTGTTGTATGTGATGCCCTCTCTTCATACAAGTATGTGGGGCCAAACCAGAAGGC 900 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TGACTTTCTTCTTGCTTGCAGGTAACATGTTTTTCCTTGTTTCTGCATTTATAAATTCAG 960 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 AAGTTACAATGAGTTACCAATCATCAGTTCATTACAGCCAATGGAAAGCTACCTGAATGC 1020 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 ATTGAAATAACAATGGTTTTGTGCAACTGTGCATTTTCCAATTGTTCTGTTCAGAATTAA 1080 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 GGAGAGAAAGGAATCAGTGACAGTACTCTTATGTGGGACTAGCGGATGCGGCAAATCTAC 1140 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 GCTATCATCTTTGTTGGTATGTTTATCACTTACGCGAACCATACAATTCCGGATGAGTGA 1200 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 ATGCTCTACTGTACCAGCAACATAGTAGTAGTTTGTTACATGTTAAAGTATAATGCAAAA 1260 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 CGTCTGTAGAACAAAATCCACTTGAAAAAAAAAATCCTTTCTAGACCTATCAATTACCTC 1320 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 ATTGCTTTCAGAAGATTGTATCGCTTACCGAACAATGAATGATTCTGGGTCTTGATTAAT 1380 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 ACTTGATATGGTCTGTCTGTTTTTCTCAGGGTAGTAGATTGGGTATCACGACAGTAGTTT 1440 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 CTACTGATTCCATACGCCATATGATGAGAGGCTTTACGGATGAGAAGCAAAATCCTCTTC 1500 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TCTATGCATCAACCTATCATGCAGGCGAATGCTTAGACCCTGTTGCAGTTGCTCAGGCAA 1560 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 -----------------------------------------CCACTAGATTTAATGACCC 19 consensus_13092#0 AGGCAAAACGGAAGGCACAGAAGCTTGACATTGTTTCTCATCCTAATACCAATGAAGGCA 1620 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 CCCCTTAAAATTAGGAGAAAATTAGGCGAAAAACAAATCCAAAAGCGAAGACCCAAGAGG 79 consensus_13092#0 GAGACGACACTTCAGATGATAAAGCTCATCATGGATCCTCCGAATTGCCTCCTAGAACGG 1680 consensus_13092#2 -----------------------------------GACACTGAATGGACTGAAGGAGTAG 25 consensus_13092#1 AAGAAGGTTAATCAAACCAAGACAAGAGAGAGAGAGAGAAAGCAAGCACAGATAGAG-AG 138 * * * ** * consensus_13092#0 AGTTGATCGGCAGCAAGCAAATGGCAATAGAAGGGTTCAAG-----GCGCAAAGCGAGAT 1735 consensus_13092#2 A----AACGGCAGCAAGCAAATGGCAATAGAAGGGTTCGAG-----GCGCAAAGCGAGAT 76 consensus_13092#1 AGAAACAAGAGAGAGAAGAAGAAGAAGAAGAAGGGTAGAAGAGGACGCCGAGAGCGGCAG 198 * * ** * ** * * ******** ** ** * **** * consensus_13092#0 GGTAAT-AGACAGCCTGGACAGATTAATTACGTCCTGGGAGGA-GCAGAAACAATCTGTA 1793 consensus_13092#2 GGTAAT-AGACAGCCTGGACAGATTAATTACGTCCTGGGAGGA-GCAGAAACAATCTGTA 134 consensus_13092#1 AGGGGTGAGGCCATGTGTACGCCATGGGCGTGCGCTGCGTGGACGTCGTGACA-CCTGCC 257 * * ** * ** ** * * *** * *** * * *** *** consensus_13092#0 ATTGTTGAGGGAGT----TCATCTAAGCCTCAATTTTGTGATGGGGCTAATGAAGAAACA 1849 consensus_13092#2 ATTGTTGAGGGAGT----TCATCTAAGCCTCAATTTTGTGATGGGGCTAATGAAGAAACA 190 consensus_13092#1 GCCGCCCGCGCACCGCCATCGCCATGCCCATGCCGCCGCAATGCGCCTCCTCAA-AACCC 316 * * * ** * ** * *** * ** * ** ** * consensus_13092#0 CCCTTCCATAATACCATTTATGGTATACAT---TGCGAATGAGGAGA-AACACATGGAGC 1905 consensus_13092#2 CCCTTCCATAATACCATTTATGGTATACAT---TGCGAATGAGGAGA-AACACATGGAGC 246 consensus_13092#1 CCTTCTCCTCCTCCTCCTCCTCATCCCCACGAGCACGAGGTAGGGGACGACATGGCGGAG 376 ** * * * * * * * * ** *** *** ** *** * consensus_13092#0 GATTCGCTGTA-----------CGTGCAAAGTACATGACACTAGACCCAGCGAAGAACAG 1954 consensus_13092#2 GATTCGCTGTA-----------CGTGCAAAGTACATGACACTAGACCCAGCGAAGAACAG 295 consensus_13092#1 GAGGCGCCGCCGCCGCCGCCGCCGCCCAAGCTCCTCTACATTGCCGTCTCCGACGCCGCC 436 ** *** * ** *** * * *** * * *** * consensus_13092#0 ATATATCAAATACATCCGGAACATCAGA---GCAATCCAGGACTACCTTTGTAACCGTGC 2011 consensus_13092#2 ATATATCAAATACATCCGGAACATCAGA---GCAATCCAGGACTACCTTTGTAACCGTGC 352 consensus_13092#1 GCTCGCCGCGC-CTTCCGCTACACGCGCCCCGTGCTTCATGGCACCCTCCAACTCATGGG 495 * * **** *** * * * ** * * *** * * consensus_13092#0 AGACAAG---CATCTGGTGCCCAAGATTAACAATA------CTAATGTTGACCAGAGTGT 2062 consensus_13092#2 AGACAAG---CATCTGGTGCCCAAGATTAACAATA------CTAATGTTGACCAGAGTGT 403 consensus_13092#1 ATGCAAGGCTCGCCATGCCTTCAAGATTAGCAAGAGGGTGTTCAATGTGATGAGGAGTGA 555 * **** * * * ******** *** * ***** ***** consensus_13092#0 G---------GCGGCCATA---CACGCCACGGTT-----------TTCAGCTGTCTTCGC 2099 consensus_13092#2 G---------GCGGCCATA---CACGCCACGGTT-----------TTCAGCTGTCTTCGC 440 consensus_13092#1 ATTCTTGGATGCATCCAAATCTCATACTGCAGATAATGAAGAAAATGCCCCTTCCCTTGT 615 ** *** * ** * * * * * * ** * * * consensus_13092#0 A------GGCGAGAAGCTGGGGAGCAGTTGTATGACCTCAACACA-AACACTGTAGCTGT 2152 consensus_13092#2 A------GGCGAGAAGCTGGGGAGCAGTTGTATGACCTCAACACA-AACACTGTAGCTGT 493 consensus_13092#1 AAAAGATGATGAGATGCTGAAGCCCAATATTTTGGAAGCAACTCTTAGTAGCATACCCTT 675 * * **** **** * ** * * ** **** * * * ** * * consensus_13092#0 --AGTGAATGAGGAATACAGGAACCAGCGT-GCTGCTAACTCACTGGGTTCCAAGGGAAT 2209 consensus_13092#2 --AGTGAATGAGGAATACAGGAACCAGCGT-GCTGCTAA--------------------- 529 consensus_13092#1 CGAGTTATACAAGACCCAAACAACCATCGTTGTTTCTAGGGAGAAGTTCCTAAGTGTTGT 735 *** * * ** * ***** *** * * *** consensus_13092#0 GTTTCAGTTGATACAAAGACAGGGATCTTCAAGAAATTTGATGGCTATCCTTAATACTGA 2269 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ATGTGATGCCCTCTCTTCATACAAGTATGTGGGGCCAAACCAGAAGGCTGACTTTCTTCT 795 consensus_13092#0 CGGTAGTGTCACCAAAGCTTGGCATGTGGATAAAAACAATGGCAATGGAAGTCTCGATGG 2329 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 TGCTTGCAGAATTAAGGACAGAAAGGAATCAGTGACAGTACTC----------------- 838 consensus_13092#0 TACAAGCAGTGACAAATCAACAAAAAATCCCATGTATGATACATTTGGGAAGGCGGAGCC 2389 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 AGTCAATCTCCAGTTCGGATCTTTCGGGATCAGTGCATGGATGAGTGACACAGGTGGCAC 2449 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 CAGCCATACAGGAAGTGTAGATGACTTGAGAGCTGATGGCATTGAAACGGGCGGCAGATA 2509 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TTATTCCTCATGCTGCAGTTCACCAAAGGTGTCAGATTGCCCTTCAAAAGAGCTTATGGA 2569 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 GGATGATTATTCAGTTTTTGGTAGCGAAGAAGATGCTGATGATCCTCCTGATGCTGGAAC 2629 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TGACGAAGACCTAACTGATGAAGAAAGAGATATGCACGAGATAGAAGCAGGCTCTGTTGA 2689 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TGAACACTCCACCAAGTCCGACGAGGAATACGACGATCTGGCAATGCAGGATGTGATGGA 2749 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 GAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCA 2809 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 GGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAA 2869 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCAC 2929 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 AGAACTGCCGTGTGCATAGTGCCTCCGGTGTCAAAGCAACTGTTGTTGGTCCAGATGTGC 2989 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TCTGAACTCGGTTGTTATGTATCCTGATGAGCTTACCTCCATGACTGTAACTGTAAGAGA 3049 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 GGATCTGCTGCTTGTCTAAGCAATACAGATCACTTAGAATCCGTGTAATCCAATAACTCT 3109 consensus_13092#2 ------------------------------------------------------------ consensus_13092#1 ------------------------------------------------------------ consensus_13092#0 TGAAAAGATGAAATAATAAAGGGTGAATAAATAGTTTGATACAAAAAA 3157 consensus_13092#2 ------------------------------------------------ consensus_13092#1 ------------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||