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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13094#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1553 fasta sequence
[TTCCCCGAATCCCCCACCCCTCCTCATCTCCCTCCTTCCCTTCCGCCTCCGCCTCCGACTCCTCCTCTCCGGCTCTCCTCTCCTCTTCCCGTCGCTTCCGCCCCCTACAAATACTCGCCCACCTCCTCCTCCCCTCCCCTTCGCTTCCTCCTCACCTCGCCTCTCCTCGCCTCGCCGCCGCCTCCTCCCTCGTCGTCGTCGTCGTC-GGGGTGTTTGGGGGGATTCGGTTGGGCGGCGACATGGGGGTGTACCTGAGCACGCCCAAGACGGAGAAGTACTCCGGCGAGGGCGGGAACGACCGCCTCCGCTACGGCCTCGCATCCATGCAGGGATGGCGGACGACCATGGAGGACGCGCACACTGCCCTGCCACGCCTGGACGAATGCACATCCTTTTTTGGTGTCTATGATGGCCATGGAGGGAAGGCAGTATCTAAGTTTTGTGCGAAACATCTACACTTGCAAGTACTGAAAAATGAGGCTTATTCATCTGGTGATTTGGCTACTTCTGTCTTAAAGTCATTTTTCAGAATGGATGAGATGATGAAAGGGCAAAGGGGGTGGAGGGAACTGGCTGAATTGGGGGACAAGGGACAAAAGTTTACTGGCATGTTAGAAGGCATAATATGGTCCCCGAAACCTGGAGAGTCAGATAAACCTGAGGACACTTGGACTGAGGAGGGTCCTCATTCTCATTTTCCTGGGCCAACATCTGGAAGCACTGCTTGTGTGGCTATCATAAGAAATGATGAACTCATTGTTGCAAATGCTGGTGATTCCCGGTGTGTGCTCTCAAGGAAGGGTCGAGCTTATGACCTGTCAAAAGATCACAAGCCAGATCTTGATGCAGAAAAGGAGAGGATACTGAATGCTGGTGGTTTCATTGTTGCTGGGCGGGTCAATGGAAGTTTGAACTTGGCAAGGGCAATAGGGGATATGGAATTGAAGCAGAATGAATTTCTCCCAGCCGAGAGACAGATTGTCACTGCTGAACCTGAATTAAACACAGTTAAACTTTCTGAGGATGATGAGTTCATCGTTTTAGCATGTGATGGCATATGGGATTGCATGTCAAGTCAAGAAGTGGTGGACTTTGTTCACAAAGAAATGAACACTGAGGATAGCCTATCTGCTGTCTGCGAGAAGTTGCTTGACCATTGCTTGGCACCTGTATCCGGTGGTGATGGCTGTGATAATATGACAGTGATCATAGTCAAGTTCAAGAAGCCAAGCAAGTCAGCTGCTACTTCAAGCACAAATCAATCTGTCTCTTCAGAAGAGATGCGACCAAAAATTTGAGCCCTTACCTTTGTGAACAGCGAGCTTGATGATGGCCCAAGCGATCCAAACAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCAACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCATGTTGCTTAATCGAACTGGGTTGTGTGAAATGCATGAAT]
[+] EMBL AK111778 [TTCCCCGAATCCCCCACCCCTCCTCATCTCCCTCCTTCCCTTCCGCCTCCGCCTCCGACTCCTCCTCTCCGGCTCTCCTCTCCTCTTCCCGTCGCTTCCGCCCCCTACAAATACTCGCCCACCTCCTCCTCCCCTCCCCTTCGCTTCCTCCTCACCTCGCCTCTCCTCGCCTCGCCGCCGCCTCCTCCCTCGTCGTCGTCGTCGTC GGGGTGTTTGGGGGGATTCGGTTGGGCGGCGACATGGGGGTGTACCTGAGCACGCCCAAGACGGAGAAGTACTCCGGCGAGGGCGGGAACGACCGCCTCCGCTACGGCCTCGCATCCATGCAGGGATGGCGGACGACCATGGAGGACGCGCACACTGCCCTGCCACGCCTGGACGAATGCACATCCTTTTTTGGTGTCTATGATGGCCATGGAGGGAAGGCAGTATCTAAGTTTTGTGCGAAACATCTACACTTGCAAGTACTGAAAAATGAGGCTTATTCATCTGGTGATTTGGCTACTTCTGTCTTAAAGTCATTTTTCAGAATGGATGAGATGATGAAAGGGCAAAGGGGGTGGAGGGAACTGGCTGAATTGGGGGACAAGGGACAAAAGTTTACTGGCATGTTAGAAGGCATAATATGGTCCCCGAAACCTGGAGAGTCAGATAAACCTGAGGACACTTGGACTGAGGAGGGTCCTCATTCTCATTTTCCTGGGCCAACATCTGGAAGCACTGCTTGTGTGGCTATCATAAGAAATGATGAACTCATTGTTGCAAATGCTGGTGATTCCCGGTGTGTGCTCTCAAGGAAGGGTCGAGCTTATGACCTGTCAAAAGATCACAAGCCAGATCTTGATGCAGAAAAGGAGAGGATACTGAATGCTGGTGGTTTCATTGTTGCTGGGCGGGTCAATGGAAGTTTGAACTTGGCAAGGGCAATAGGGGATATGGAATTGAAGCAGAATGAATTTCTCCCAGCCGAGAGACAGATTGTCACTGCTGAACCTGAATTAAACACAGTTAAACTTTCTGAGGATGATGAGTTCATCGTTTTAGCATGTGATGGCATATGGGATTGCATGTCAAGTCAAGAAGTGGTGGACTTTGTTCACAAAGAAATGAACACTGAGGATAGCCTATCTGCTGTCTGCGAGAAGTTGCTTGACCATTGCTTGGCACCTGTATCCGGTGGTGATGGCTGTGATAATATGACAGTGATCATAGTCAAGTTCAAGAAGCCAAGCAAGTCAGCTGCTACTTCAAGCACAAATCAATCTGTCTCTTCAGAAGAGATGCGACCAAAAATTTGAGCCCTTACCTTTGTGAACAGCGAGCTTGATGATGGCCCAAGCGATCCAAACAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCAACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCATGTTGCTTAATCGAACTGGGTTGTGTGAAATGCATGAAT]
[+] EMBL CB663375 [ TCCCTTCCGCCTCCGCCTCCGACTCCTCCTCTCCGGCTCTCCTCTCCTCTTCCCGTCGCTTCCGCCCCCTACAAATACTCGCCCACCTCCTCCTCCCCTCCCCTTCGCTTCCTCCTCACCTCGCCTCTCCTCGCCTCGCCGCCGCCTCCTCCCTCGTCGTCGTCGTCGTCGGGGGTGTTTGGGGGGATTCGGTTGGGCGGCGACATGGGGGTGTACCTGAGCACGCCCAAGACGGAGAAGTACTCCGGCGAGGGCGGGAACGACCGCCTCCGCTACGGCCTCGCATCCATGCAGGGATGGCGGACGACCATGGAGGACGCGCACACTGCCCTGCCACGCCTGGACGAATGCACATCCTTTTTTGGTGTCTATGATGGCCATGGAGGGAAGGCAGTATCTAAGTTTTGTGCGAAACATCTACACTTGCAAGTACTGAAAAATGAGGCTTATTCATCTGGTGATTTGGCTACTTCTGTCTTAAAGTCATTTTTCAGAATGGATGAGATGATGAAAGGGCAAAGGGGGTGGAGGGAACTGGCTGAATTGGGGGACAAGGGACAAAAGCTTACTGGCATGCTAGAAGGCATAAT ]
consensusID : consensus_13094#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1446 fasta sequence
[TGAACACTGTAAGCAACTGATATTCACAGAATTTACATTATGCACTAAAAATATATAGTTCATAGTGTTGTGTTTTGCAATATGCTTATGTTATGGTTTCCTAATTTACTGGGAAAACAACTACAGGAGGATAGCCTATCTGCTGTCTGCGAGAAGTTGCTTGACCATTGCTTGGCACCTGTATCCGGTGGTGATGGCTGTGATAATATGACAGTGATCATAGTCAAATTCAAGAAGCCAAGCAAGTCAGCTGCTACTTCAAGCACAAATCAATCTGTCTCTTCAGAAGAGATGCGACCAAAGTGAGCTTCCTTTAACCGTCGCACCTAAACCATATTCCAGATCACGAAATCTCGCATTGTAAAAGCCTGAGTTCCCCTTTCAGAATTTGAGCCCTTACCTTTGTGAACAGCGAGCTTGATGATGGCCCAAGCGATCCAAACAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCAACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCATGTTGCTTAATCGAACTGGGTTGTGTGAAATGCATGAATTTTCCAATGCTCCATCCTGTCGCTGCTTTCTCCGCCTGGAAATTTTTTCCTGAATCCTGATGCTCTATCATGAACCAATATTCTTGCTGAATTAATACTTGAATATAAATCTGATTTTGGTGCTACATTAATCAAGTCCCTGATAAAAATGCGAGCAAAACACACAATGTGCCAATGTTCTTGAGTTCTTCCAAGCACAAGTGCAGAGATTAATTAATCATGGCAATATGGCGACAGCTGCGGCGGCCACGGCGAGCACTGCCATCCACACGGCGGCGCCCGGCATGGCGGCAGCGGCGGCCTCCTGTGCGGCTCCGTCGCCGCCGTGGTTCTTGGCGCCGTCGCCGGTGGCATTGTGCTTCAGCGGGTGGACGGTGATGGCGACCTTCATGCCGGCCTGGCAGAAGCCGTTGCCGCAGATGAAGTAGTAGCGGCGTGAGTCGTTGAGCGGGATGAAGTCCTTGCCGGAGGTCCAGTTGCCGGCGACCCCGGCCATGGTGCAGTTGTCGTACCCCGTCTGGTTCACCTCGAACACGTTGTGCGTCCCCTTCTGGTACCTGAACGAGATGAGGTCGCCGACGTAGAAGGTCTGGTTGCCGGACCAGAGGGAGTAGTCGATGTTTGGGTTCCAGCCGTGGTTAGCGCCGACGATATGGTCCGTCGCACCGGCGAGGCTCACGGCGAAGCCGGCGACGACGGCGACGAGCAGCAGGTGGCACGCCATTGCGCCGCCGCCGAGCTCAACCCAGGGAGCCAATGGAAGGGTAAGAGGAGGGGAGAGAGAAGCACGGGCGATTTG]
[-] EMBL AK108807 [TGAACACTGTAAGCAACTGATATTCACAGAATTTACATTATGCACTAAAAATATATAGTTCATAGTGTTGTGTTTTGCAATATGCTTATGTTATGGTTTCCTAATTTACTGGGAAAACAACTACAGGAGGATAGCCTATCTGCTGTCTGCGAGAAGTTGCTTGACCATTGCTTGGCACCTGTATCCGGTGGTGATGGCTGTGATAATATGACAGTGATCATAGTCAAATTCAAGAAGCCAAGCAAGTCAGCTGCTACTTCAAGCACAAATCAATCTGTCTCTTCAGAAGAGATGCGACCAAAGTGAGCTTCCTTTAACCGTCGCACCTAAACCATATTCCAGATCACGAAATCTCGCATTGTAAAAGCCTGAGTTCCCCTTTCAGAATTTGAGCCCTTACCTTTGTGAACAGCGAGCTTGATGATGGCCCAAGCGATCCAAACAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCAACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCATGTTGCTTAATCGAACTGGGTTGTGTGAAATGCATGAATTTTCCAATGCTCCATCCTGTCGCTGCTTTCTCCGCCTGGAAATTTTTTCCTGAATCCTGATGCTCTATCATGAACCAATATTCTTGCTGAATTAATACTTGAATATAAATCTGATTTTGGTGCTACATTAATCAAGTCCCTGATAAAAATGCGAGCAAAACACACAATGTGCCAATGTTCTTGAGTTCTTCCAAGCACAAGTGCAGAGATTAATTAATCATGGCAATATGGCGACAGCTGCGGCGGCCACGGCGAGCACTGCCATCCACACGGCGGCGCCCGGCATGGCGGCAGCGGCGGCCTCCTGTGCGGCTCCGTCGCCGCCGTGGTTCTTGGCGCCGTCGCCGGTGGCATTGTGCTTCAGCGGGTGGACGGTGATGGCGACCTTCATGCCGGCCTGGCAGAAGCCGTTGCCGCAGATGAAGTAGTAGCGGCGTGAGTCGTTGAGCGGGATGAAGTCCTTGCCGGAGGTCCAGTTGCCGGCGACCCCGGCCATGGTGCAGTTGTCGTACCCCGTCTGGTTCACCTCGAACACGTTGTGCGTCCCCTTCTGGTACCTGAACGAGATGAGGTCGCCGACGTAGAAGGTCTGGTTGCCGGACCAGAGGGAGTAGTCGATGTTTGGGTTCCAGCCGTGGTTAGCGCCGACGATATGGTCCGTCGCACCGGCGAGGCTCACGGCGAAGCCGGCGACGACGGCGACGAGCAGCAGGTGGCACGCCATTGCGCCGCCGCCGAGCTCAACCCAGGGAGCCAATGGAAGGGTAAGAGGAGGGGAGAGAGAAGCACGGGCGATTTG]
[-] EMBL AK107999 [ TACTTGAATATAAATCTGATTTTGGTGCTACATTAATCAAGTCCCTGATAAAAATGCAAGCAAAACACACAATGTGCCAATGTTCTTGAGTTCTTCCAAGCACAAGTGCAGAGATTAATTAATCATGGCAATATGGCGACAGCTGCGGCGGCCACGGCGAGCACTGCCATCCACACGGCGGCGCCCGGCATGGCGGCAGCGGCGGCCTCCTGTGCGGCTCCGTCGCCGCCGTGGTTCTTGGCGCCGTCGCCGGTGGCATTGTGCTTCAGCGGGTGGACGGTGATGGCGACCTTCATGCCGGCCTGGCAGAAGCCGTTGCCGCAGATGAAGTAGTAGCGGCGTGAGTCGTTGAGCGGGATGAAGTCCTTGCCGGAGGTCCAGTTGCCGGCGACCCCGGCCATGGTGCAGTTGTCGTACCCCGTCTGGTTCACCTCGAACACGTTGTGCGTCCCCTTCTGGTACCTGAACGAGATGAGGTCGCCGACGTAGAAGGTCTGGTTGCCGGACCAGAGGGAGTAGTCGATGTTTGGGTTCCAGCCGTGGTTAGCGCCGACGATATGGTCCGTCGCACCGGCGAGGCTCACGGCGAAGCCGGCGACGACGGCGACGAGCAGCAGGTGGCACGCCATTGCGCCGCCGCCGAGCTCAACCCAGGGAGCCAATGGAAGGGTAAGA ]
consensusID : consensus_13094#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 804 fasta sequence
[ATGATGAACTCATTGTTGCAAATGCTGGTGATTCCCGGTGTGTGCTCTCAAGGAAGGGTCGAGCTTATGACCTGTCAAAAGATCACAAGCCAGATCTTGATGCAGAAAAGGAGAGGATACTGAATGCTGGTGGTTTCATTGTTGCTGGGCGGGTCAATGGAAGTTTGAACTTGGCAAGGGCAATAGGGGATATGGAATTGAAGCAGAATGAATTTCTCCCAGCCGAGAGACAGATTGTCACTGCTGAACCTGAATTAAACACAGTTAAACTTTCTGAGGATGATGAGTTCATCGTTTTAGCATGTGATGGCATATGGGATTGCATGTCAAGTCAAGAAGTGGTGGACTTTGTTCACAAAGAAATGAACACTGA-GGATAGCCTATCTGCTGTCTGCGAGAAGTTGCTTGACCATTGCTT-GGCACCT-G-TAT-CCGGT-GGTGATGGCTGTG-ATAATATGA-CAGT-GATCATAGTC--AAGTT-CAAGAAG-CCAAGC--AAGTCAG-CTG-CTACTT-CA-AG-CAC-AAATCAAT-CTGT-CTCTT-CAG-AAG-AGATGCGA-CCAAACGAGCTTGATG-ATGGCCCA-AGC-GATCCAAACAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCA-ACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCA-TGTTGCTTAATCGAACTGGGTTGTGTGAAATGCATGAATTTTCCCATGCTCAAAAAAAAAA]
[-] EMBL CB663376 [ATGATGAACTCATTGTTGCAAATGCTGGTGATTCCCGGTGTGTGCTCTCAAGGAAGGGTCGAGCTTATGACCTGTCAAAAGATCACAAGCCAGATCTTGATGCAGAAAAGGAGAGGATACTGAATGCTGGTGGTTTCATTGTTGCTGGGCGGGTCAATGGAAGTTTGAACTTGGCAAGGGCAATAGGGGATATGGAATTGAAGCAGAATGAATTTCTCCCAGCCGAGAGACAGATTGTCACTGCTGAACCTGAATTAAACACAGTTAAACTTTCTGAGGATGATGAGTTCATCGTTTTAGCATGTGATGGCATATGGGATTGCATGTCAAGTCAAGAAGTGGTGGACTTTGTTCACAAAGAAATGAACACTGA GGATAGCCTATCTGCTGTCTGCGAGAAGTTGCTTGACCATTGCTT GGCACCT G TAT CCGGT GGTGATGGCTGTG ATAATATGA CAGT GATCATAGTC AAGTT CAAGAAG CCAAGC AAGTCAG CTG CTACTT CA AG CAC AAATCAAT CTGT CTCTT CAG AAG AGATGCGA CCAAACGAGCTTGATG ATGGCCCA AGC GATCCAAACAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCA ACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCA TGTTGCTTAATCGAACTGGGTTGTGTGAAATGCAT ]
[+] EMBL AU057604 [ TGCAAATGCTGGTGATTCCCGGTGTGTGCTCTCAAGGAAGGGTCGAGCTTATGACCTGTCAAAAGATCACAAGCCAGATCTTGATGCAGAAAAGGAGAGGATACTGAATGCTGGTGGTTTCATTGTTGCTGGGCGGGTCAATGGAAGTTTGAACTTGGCAAGGGCAATAGGGGATATGGAATTGAAGCAGAATGAATTTCTCCCAGCCGAGAGACAGATTGTCACTGCTGAACCTGAATTAAACACAGTTAAACTTTCTGAGGATGATGAGTTCATCGTTTTAGCATGTGATGGCATATGGGATTGCATGTCAAGTCAAGAAGTGGTGGACTTTGTTCACAAAGAAATGAACACTGAGGGATAGCCTATCTGCTGTCTGCGAGAAGTTGCTTGACCATTGCTTGGGCACCT GTTATCCCGGTGGGTGATGGCTGTGAATAATATGACCNGTGGATCATAGTCCAAAGTTCCAAGAAGCCCAAGCCAAAGTCAGCCTGCCTACTTCCA AGCCACAAAATCAATCCTGTCCTCTTCCAGNAAGAAGATGCGA CCCAA ]
[+] EMBL BI807115 [ acCTGA GGATAGCCTATCT CTGTCTGCGAGAAGTGGCTGGACCCTTGCTT GGCNCCTGG TAT CCGGT GGTGATGGCTGTG ATAATATGA CCGN GATCATAGTC AAGTT CAAGAAG CCCAGC AAGTCAG CTG CTACTT CATAG CNC CAATCCAT CTGT CTCTT CAG AAG AGATGCGA CCCAACGAGCTTGATGTATGGCCCACAGC GATCCCAACAAGTAGCAGGCCGAGACCGAACCCTGGAGTTCCACACCGGTGATAGACCAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCNCCACCTGTAATACATGCCANTGTTGCTTAATCGAACTGGGTTGTGTGAAATGCATGAATTTTCCCATGCTCAAAAAAAAAA]
[+] EMBL AU068364 [ AAGTT CAAGAAG CCAAGC AAGTCAG CTG CTACTT CA AG CAC AAATCAAT CTGT CTCTT CAG AAG AGATGCGA CCAAACGAGCTTGATG ATGGCCCA AGC GATCCAAACAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCA ACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCA TGTTGCTTAATCGAACTGGGTTGTGTGAAAaaaaaa ]
[+] EMBL AU083360 [ CGACCCAAACGAGCTTGATG ATGGCCCA AACGGACCCAAACAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCA ACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGNTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCA TGTTGCTTAATCGAACTGGGTTGTGTGAAAaaaaa ]
[+] EMBL CB681725 [ TTCCACACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCA TGTTGCTTAATCGAACTGGGTTGTGTGAAATGCA ]
consensusID : consensus_13094#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 714 fasta sequence
[AATTTTCTCCCCAGCCCGAGAGACAGATTNTCACTGCTGAACCTGAATTTAAACCCCAGTTAAACTTTCTGAGGATGATGAGTTCATCGTTTTAGCATGTGGATGGCATATGGGATTGCATGTCAAGTCAAGAAGTGGTGGACTTTGTTTCACAAAGAATGGAACACTGGAGGATAGCCTATCTGCTGGTCTGCGAGAAGTTGCTTGGACCATTGCTTGGCACCCTGTATCCGGTGGTGATGGCTGTGATAATATGACAGTGATCATAGTCAAGTTCAAGAAGCCAAGCAAGTCAGCTGCTACTTCAAGCACAAATCAATCTGTCTCTTCAGAAGAGATGCGACCAAAGTGAGCTTCCTTTAACCGTCGCACCTAAACCATATTCCAGATCACGAAATCTCGCATTGTAAAAGCCTGAGTTCCCCTTTCAGAATTTGAGCCCTTACCTTTGTGAACAGCGAGCTTGATGATGGCCCAAGCGATCCAAACAAGT-AGCAGGCCGAGACCGAACCATGGAGTTCCAACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCATGTTGCTTAATCGAACTGGGTTGTGTGAAAAAAAAAAATTTTCCATGCTCAAAAAAAAAA]
[+] EMBL AU057605 [AATTTTCTCCCCAGCCCGAGAGACAGATTNTCACTGCTGAACCTGAATTTAAACCCCAGTTAAACTTTCTGAGGATGATGAGTTCATCGTTTTAGCATGTGGATGGCATATGGGATTGCATGTCAAGTCAAGAAGTGGTGGACTTTGTTTCACAAAGAATGGAACACTGGAGGATAGCCTATCTGCTGGTCTGCGAGAAGTTGCTTGGACCATTGCTTGGCACCCTGTATCCGGTGGTGATGGCTGTGATAATATGACAGTGATCATAGTCAAGTTCAAGAAGCCAAGCAAGTCAGCTGCTACTTCAAGCACAAATCAATCTGTCTCTTCAGAAGAGATGCGACCAAAGTGAGCTTCCTTTAACCGTCGCACCTAAACCATATTCCAGATCACGAAATCTCGCATTGTAAAAGCCTGAGTTCCCCTTTCAGAATTTGAGCCCTTACCTTTGTGAACAGCGAGCTTGATGATGGCCCAAGCGATCCAAACAAGT AGCAGGCCGAGACCGAACCATGGAGTTCCAACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCATGTTGCTTAATCGAACTGGGTTGTGTGAAAAAAAAAAA ]
[+] EMBL BI809284 [ GAAATCTCGCATTGTAAAAGCCTGAGTTCCCCTTTCAGAATTTGAGCCCTTACCTTTGTGAACAGCGAGCTTGATGATGGCCCAAGCGATCC AACAAGTGAGCAGGCCGAGACCGAACCATGGAGTTCCAACCGGTGATAGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTATAGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGCCATGTTGCTTAATCGAACTGGGTTGTGTGAAATGCATGAATTTTCCATGCTCAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13094#0 TTCCCCGAATCCCCCACCCCTCCTCATCTCCCTCCTTCCCTTCCGCCTCCGCCTCCGACT 60
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 ------------------------------------------------------------
consensus_13094#0 CCTCCTCTCCGGCTCTCCTCTCCTCTTCCCGTCGCTTCCGCCCCCTACAAATACTCGCCC 120
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 -------------------------------TGAACACTGTAAGCAACTGATATTCACAG 29
consensus_13094#0 ACCTCCTCCTCCCCTCCCCTTCGCTTCCTCCTCACCTCGCCTCTCCTCGCCTCGCCGCCG 180
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 AA-TTTACATTATGCACTAAAAATATATAGTTCATAGTGTTGTGTTTTGCAATATGCTTA 88
consensus_13094#0 CCTCCTCCCTCGTCGTCGTCGTCGTCGGGGTGTTTGGGGGGATTCGGTTGGGCGGCGACA 240
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 TGTTATGGTTTCCTAATTTACTGGGAAAACAACTACAGGAGGATAGCCTATCTGCTGTCT 148
consensus_13094#0 TGGGGGTGTACCTGAGCACGCCCAAGACGGAGAAGTACTCCGGCGAGGGCGGGAACGACC 300
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 GCGAGAAGTTGCTTGACCATTGCTTGGCACCTGTATCCGGTGGTGATGGCTGTGATAATA 208
consensus_13094#0 GCCTCCGCTACGGCCTCGCATCCATGCAGGGATGGCGGACGACCA-TGGAGGACGCGCAC 359
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 TGACAGTGATCATAGTCAAATTCAAGAAGCCAAGCAAGTCAGCTGCTACTTCAAGCACAA 268
consensus_13094#0 ACTGCCCTGCCACGCCTGGACGAATGCACATCCTTTTTTGGTGTCTATGATGGCCATGGA 419
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 ATCAATCTGTCTCTTCAGAAGAGATGC---------------GACCAAAGTGAGCTTCCT 313
consensus_13094#0 GGGAAGGCAGTATCTAAGTTTTGTGCGAAACATCTACACTTGCAAGTACTGAAAAATGAG 479
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 TTAACCGTCGCACCTAAACCATATTCCAGATCACGAAATCT-CGCATTGTAAAAGCCTGA 372
consensus_13094#0 GCTTATTCATCTGGTGATTTGGCTACTTCTGTCTTAAAGTCATTTTTCAGAATGGATGAG 539
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 GTTCCCCTTTCAGAATTTGAGCCCTTACCTTTGTGAACAGCGAGCTTGATGATGGCCCAA 432
consensus_13094#0 ATGATGAAAGGGCAAAGGGGGTGGAGGGAACTGGCTGAATTGGGGGACAAGGGACAAAAG 599
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 GCGATCCAAACAAGTAGCAGGCCGAG---ACCGAACCA-TGGAGTTCCAACCGGTGATAG 488
consensus_13094#0 TTTACTGGCATGTTAGAAGGCATAATATGGTCCCCGAAACCTGGAGAGTCAGATAAACCT 659
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 ACAAAAAGGATAGTAAGTGGTGTA-TATAAGAAAAGGGATTCTATTCTACAGTCACTATA 547
consensus_13094#0 GAGGACACTTGGACTGAGGAGGGTCCTCATTCTCATTTTCCTGGGCCAACATCTGGAAGC 719
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 GGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAA-TACATGC 606
consensus_13094#0 ACTGCTTGTGTGGCTATCATAAGAAATGATGAACTCATTG--TTGCAAATGCTGGTGATT 777
consensus_13094#2 -------------------------ATGATGAACTCATTG--TTGCAAATGCTGGTGATT 33
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 CATG-TTGCTTAATCGAACTGGGTTGTGTGAAATGCATGAATTTTCCAATGCTCCATCCT 665
consensus_13094#0 CCCGGTGTGTGCTCTCAAGGAAGGGTCGAGCTTATGACCTGTCAAAAGATCACAAGCCAG 837
consensus_13094#2 CCCGGTGTGTGCTCTCAAGGAAGGGTCGAGCTTATGACCTGTCAAAAGATCACAAGCCAG 93
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 GTCGCTGCTTTCTCCGCCTGGAAATTTTTTCCTGAATCCTGATGCTCTATCATGAACCA- 724
consensus_13094#0 ATCTTGATGCAGAAAAGGAGAGGATACTGAATGCTGGTGGTTTCATTGTTGCTGGGCGGG 897
consensus_13094#2 ATCTTGATGCAGAAAAGGAGAGGATACTGAATGCTGGTGGTTTCATTGTTGCTGGGCGGG 153
consensus_13094#3 ------------------------------------------------------------
consensus_13094#1 ATATTCTTGCTGAATTA------ATACTTGAATATAAATCTGATTTTGGTGCTACATTAA 778
consensus_13094#0 TCAATGGAAGTTTGAACTTGGCAAGGGCAATAGGGGATATGGAATTGAAGCAGAATGAAT 957
consensus_13094#2 TCAATGGAAGTTTGAACTTGGCAAGGGCAATAGGGGATATGGAATTGAAGCAGAATGAAT 213
consensus_13094#3 --------------------------------------------------------AATT 4
consensus_13094#1 TCAAGTCCCTGATAAAAATG-CGAGCAAAACACACAATGTGCCAATGTTCT----TGAGT 833
* *
consensus_13094#0 TTCTCCCAG--CCGAGAGACAGATTGTCACTGCTGAACCTGAATTAAA--CA-CAGTTAA 1012
consensus_13094#2 TTCTCCCAG--CCGAGAGACAGATTGTCACTGCTGAACCTGAATTAAA--CA-CAGTTAA 268
consensus_13094#3 TTCTCCCCAGCCCGAGAGACAGATTNTCACTGCTGAACCTGAATTTAAACCC-CAGTTAA 63
consensus_13094#1 TCTTCCAAG--CACAAGTGCAGAGATTAATTAATCATGGCAATATGGCGACAGCTGCGGC 891
* *** * * **** * * * * * * * * * *
consensus_13094#0 ACTTTCTGAGGATGATGAGTTCATCGTTTTAGCATGTG--ATGGCATATGGGATTGCATG 1070
consensus_13094#2 ACTTTCTGAGGATGATGAGTTCATCGTTTTAGCATGTG--ATGGCATATGGGATTGCATG 326
consensus_13094#3 ACTTTCTGAGGATGATGAGTTCATCGTTTTAGCATGTGG-ATGGCATATGGGATTGCATG 122
consensus_13094#1 GGCCACGGCGAGCACTGCCATCCACACGGCGGCGCCCGGCATGGCGGCAGCGGCGGCCTC 951
* * * ** ** * ** * ***** * * ** *
consensus_13094#0 TCAAGTCAAGAAGTGGTGGACTTTGTT-CACAAAGAAATGAACACTG-AGGATAGCCTAT 1128
consensus_13094#2 TCAAGTCAAGAAGTGGTGGACTTTGTT-CACAAAGAAATGAACACTG-AGGATAGCCTAT 384
consensus_13094#3 TCAAGTCAAGAAGTGGTGGACTTTGTTTCACAAAGAATGGAACACTGGAGGATAGCCTAT 182
consensus_13094#1 CTGTGCGGCTCCGTCGCCGCCGTGGTT-CTTGGCGCCGTCGCCGGTG--GCATTGTGCTT 1008
* ** * * * * *** * * * ** * ** * *
consensus_13094#0 CTGCTG-TCTGCGAGAA--GTTGCTTG-ACCATTGCTTGGCACC---TGTATCCGGTGGT 1181
consensus_13094#2 CTGCTG-TCTGCGAGAA--GTTGCTTG-ACCATTGCTTGGCACC---TGTATCCGGTGGT 437
consensus_13094#3 CTGCTGGTCTGCGAGAA--GTTGCTTGGACCATTGCTTGGCACCC--TGTATCCGGTGGT 238
consensus_13094#1 CAGCGGGTGGACGGTGATGGCGACCTTCATGCCGGCCTGGCAGAAGCCGTTGCCGCAGAT 1068
* ** * * ** * * * * * ** ***** ** *** * *
consensus_13094#0 GATGGCTGTGATAATATGA--CAGTGATCATAGTCAAGTTCAAGAAGCCAAGCAAGTCAG 1239
consensus_13094#2 GATGGCTGTGATAATATGA--CAGTGATCATAGTCAAGTTCAAGAAGCCAAGCAAGTCAG 495
consensus_13094#3 GATGGCTGTGATAATATGA--CAGTGATCATAGTCAAGTTCAAGAAGCCAAGCAAGTCAG 296
consensus_13094#1 GA-AGTAGTAGCGGCGTGAGTCGTTGAGCGGGATGAAGTCCTTGCCGGAGGTCCAGTTGC 1127
** * ** *** * *** * * **** * * * * ***
consensus_13094#0 CTGCTACTTCAAGCACAAATCAATCTGTCTCTTCAGAAGAGATGCGACCAAAA------- 1292
consensus_13094#2 CTGCTACTTCAAGCACAAATCAATCTGTCTCTTCAGAAGAGATGCGACCAAA-------- 547
consensus_13094#3 CTGCTACTTCAAGCACAAATCAATCTGTCTCTTCAGAAGAGATGCGACCAAAGTGAGCTT 356
consensus_13094#1 CGGCGACCCCGGCCATGGTGCAGT-TGTCGTACCCCGTCTGGTTCACCTCGAACA----- 1181
* ** ** * ** ** * **** * * * * * *
consensus_13094#0 ------------------------------------------------------------
consensus_13094#2 ------------------------------------------------------------
consensus_13094#3 CCTTTAACCGTCGCACCTAAACCATATTCCAGATCACGAAATCTCGCATTGTAAAAGCCT 416
consensus_13094#1 ------------------------------------------------------------
consensus_13094#0 ----------------ATTTGAGCCCTTACCTTTGTGAACAGCGAGCTTGATGATGGCCC 1336
consensus_13094#2 ------------------------------------------CGAGCTTGATGATGGCCC 565
consensus_13094#3 GAGTTCCCCTTTCAGAATTTGAGCCCTTACCTTTGTGAACAGCGAGCTTGATGATGGCCC 476
consensus_13094#1 ------------------CGTTGTGCGTCCCCTTCTGGTACCTGAACGAGATGAGGTCGC 1223
** * ***** * * *
consensus_13094#0 AAGCGATCCAAA-CAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCAA---CCGGTGAT 1392
consensus_13094#2 AAGCGATCCAAA-CAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCAA---CCGGTGAT 621
consensus_13094#3 AAGCGATCCAAA-CAAGTAGCAGGCCGAGACCGAACCATGGAGTTCCAA---CCGGTGAT 532
consensus_13094#1 CGACGTAGAAGGTCTGGTTGCCGGACCAGAGGGAGTAGTCGATGTTTGGGTTCCAGCCGT 1283
** * * ** ** ** * *** ** * ** * ** * *
consensus_13094#0 AGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTAT 1452
consensus_13094#2 AGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTAT 681
consensus_13094#3 AGACAAAAAGGATAGTAAGTGGTGTATATAAGAAAAGGGATTCTATTCTACAGTCACTAT 592
consensus_13094#1 GGTTAGCGCCGACGATA--TGGTCCGTCGCACCGGCGAGGCTC-ACGGCGAAGCCG--GC 1338
* * ** ** **** * * * * ** * ** *
consensus_13094#0 AGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGC 1512
consensus_13094#2 AGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGC 741
consensus_13094#3 AGGGTTTGTTCTTTCTTTCAACTAGCATCTTTTTCTTGCACCACAACCTGTAATACATGC 652
consensus_13094#1 GACGACGGCGACGAGCAGCAGGTGGCACGCCATTGCGCCGCCGCCGAGCTCAACCCAGGG 1398
* * ** * *** ** * ** * ** ** *
consensus_13094#0 CAT-GTTGCTTAATCGAACTGGGTTGTGTGAAATGCATGAAT------------------ 1553
consensus_13094#2 CAT-GTTGCTTAATCGAACTGGGTTGTGTGAAATGCATGAATTTTCCCATGCTCAAAAAA 800
consensus_13094#3 CAT-GTTGCTTAATCGAACTGGGTTGTGTGAAAAAAAAAAATTTTCC-ATGCTCAAAAAA 710
consensus_13094#1 AGCCAATGGAAGGGTAAGAGGAGGGGAGAGAGAAGCACGGGCGATTTG------------ 1446
** * * * * * ** * *
consensus_13094#0 ----
consensus_13094#2 AAAA 804
consensus_13094#3 AAAA 714
consensus_13094#1 ----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||