These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13114#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1353 fasta sequence [AAGAAGAGGAAGTGGTTGCGCCGACGACGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTCGTTGTCCCTGCTCGCCAGGTGCTCGTTGCTCCTCCAGACTGCAGCTAGCGTGACGAGAAACATCTTCTTGAGACGATATCAGAAGGTTGTCGCTGACATACTGCTGAGCAGAAAACCAGCACCCATCGGCTTAGTACCTGTCTGCTCTGCTGTCTCAGCCTCTCAGGTTGCAAACCCCATATCCCAGAGCTCGACGCCACCCATGTGGTTTTTCAACTTCAACCGAAATGGCCCCTCTGGCTTCTCCGGCGCCTCCACCGCCGAGGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGGCGTGCGCGTCGTCATGGCCGTGCGCAACGTCGCCGCCGGGCACAAGGCCCGCGAGGCGATCCGGGCGGAGATCCACGGCGCCATAGTCCATGTGCTGGAGATGGACCTCAGCTCCATGGATTCGGTGAGGAGGTTTGCCTCCGAGTTTGACTCTCTGAACCTACCTCTCAACATACTCATCAATAACGCTGGAATCCTGTCCAAGGACTGCATACGCTCCATTGACGGCCTAGAATTGCATTTTGCAACTAATCACATTGGCCATTTTCTTCTAACGAATCTTTTACTGGAGAACATGAAGAGCACAAGTAGGACAACTGGTGTCGA-AGGAAGGATCATAAATGTGTCGTCTTCGGGGCACA-TTTTGACCTATCCTGAAGGGATATGTTTCGATAGTGTAAAAGATCTTTCGAGATTCTCCACTTATATTGCTTACGGCCAGTCCAAGCTTGCCAACATTTTGCACTCTACCGAGCTTGCACGAATTCTGAAGGGAGATGGTGTGAACATTTCAGCAAATGCGATCCATCCCGGTTTTGTTGGAACCAACCTATTCAAGAACTGGACTATGGCTAATGCTGTGGTGAACACCATTGGAAGAATCGTATGTAAAACTGTAGAACAGGGTGCTGCAACGACATGTTATGTGGCATTACATCCTCAAGTTACTGGAATAAGTGGGAAGTACTTCAGCAACTGCAATTTAGAGACCCCAAGCTCACAGGCTTCAAATGCAGAGTTGGCCAAGAAACTATGGGAATTTAGCTCCAACATTGTGTCGGCTGCCAAACTGTAGTTTGAGTTATTCATATATGCATGCGCTACATTTTATTTCGTGTAAGCCGAACATAAAATTTTCATAGAAAGTCTACAAATAAAGAGAGTGTAGTTCCTCCCAAAAAAAATC] [+] EMBL AK068549 [AAGAAGAGGAAGTGGTTGCGCCGACGACGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTCGTTGTCCCTGCTCGCCAGGTGCTCGTTGCTCCTCCAGACTGCAGCTAGCGTGACGAGAAACATCTTCTTGAGACGATATCAGAAGGTTGTCGCTGACATACTGCTGAGCAGAAAACCAGCACCCATCGGCTTAGTACCTGTCTGCTCTGCTGTCTCAGCCTCTCAGGTTGCAAACCCCATATCCCAGAGCTCGACGCCACCCATGTGGTTTTTCAACTTCAACCGAAATGGCCCCTCTGGCTTCTCCGGCGCCTCCACCGCCGAGGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGGCGTGCGCGTCGTCATGGCCGTGCGCAACGTCGCCGCCGGGCACAAGGCCCGCGAGGCGATCCGGGCGGAGATCCACGGCGCCATAGTCCATGTGCTGGAGATGGACCTCAGCTCCATGGATTCGGTGAGGAGGTTTGCCTCCGAGTTTGACTCTCTGAACCTACCTCTCAACATACTCATCAATAACGCTGGAATCCTGTCCAAGGACTGCATACGCTCCATTGACGGCCTAGAATTGCATTTTGCAACTAATCACATTGGCCATTTTCTTCTAACGAATCTTTTACTGGAGAACATGAAGAGCACAAGTAGGACAACTGGTGTCGA AGGAAGGATCATAAATGTGTCGTCTTCGGGGCACA TTTTGACCTATCCTGAAGGGATATGTTTCGATAGTGTAAAAGATCTTTCGAGATTCTCCACTTATATTGCTTACGGCCAGTCCAAGCTTGCCAACATTTTGCACTCTACCGAGCTTGCACGAATTCTGAAGGGAGATGGTGTGAACATTTCAGCAAATGCGATCCATCCCGGTTTTGTTGGAACCAACCTATTCAAGAACTGGACTATGGCTAATGCTGTGGTGAACACCATTGGAAGAATCGTATGTAAAACTGTAGAACAGGGTGCTGCAACGACATGTTATGTGGCATTACATCCTCAAGTTACTGGAATAAGTGGGAAGTACTTCAGCAACTGCAATTTAGAGACCCCAAGCTCACAGGCTTCAAATGCAGAGTTGGCCAAGAAACTATGGGAATTTAGCTCCAACATTGTGTCGGCTGCCAAACTGTAGTTTGAGTTATTCATATATGCATGCGCTACATTTTATTTCGTGTAAGCCGAACATAAAATTTTCATAGAAAGTCTACAAATAAAGAGAGTGT ] [+] EMBL CB653035 [ ACGCC CCCATGTGGTTTTTCAACTTCAACCGAAATGGCCCCTCTGGCTTCTCCGGCGCCTCCACCGCCGAGGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGGCGTGCGCGTCGTCATGGCCGTGCGCAACGTCGCCGCCGGGCACAAGGCCCGCGAGGCGATCCGGGCGGAGATCCACGGCGCCATAGTCCATGTGCTGGAGATGGACCTCAGCTCCATGGATTCGGTGAGGAGGTTTGCCTCCGAGTTTGACTCTCTGAACCTACCTCTCAACATACTCATCAATAACGCTGGAATCCTGTCCAAGGACTGCATACGCTCCATTGACGGCCTAGAATTGCATTTTGCAACTAATCACATTGGCCATTTTCTTCTAACGAATCTTTTACTGGAGAACATGAAGAGCACAAGTAGGACAACTGGTGTCGA AGGAAGGATCATAAATGTGTCGTCTTCGGGGCACA TTTTGACCTATCCTGAAGGGATATGTTTCGATAGTGTAAAAGATCTTTCGAGATTCTCCACTTATATTGCTTACGGCCAGTCCAAGCTTGCCAACATTTTGCACTCTACCGAGCTTGCACGAATTCTGAAGGGAGATGGTGTGAACATTTCAGCAAATGCGATCCATCCCGGTTTTGTTGGAACCAACCTATTCAAGAACTGGACTATG ] [-] EMBL CB653036 [ CTGTCCAAGGACTGCATACGCTCCATTGACGGCCTAGAATTGCATTTTGCAACTAATCACATTGGCCATTTTCTTCTAACGAATCTTTTACTGGAGAACATGAAGAGCACAAGTAGGACAACTGGTGTCGA AGGAAGGATCATAAATGTGTCGTCTTCGGGGCACA TTTTGACCTATCCTGAAGGGATATGTTTCGATAGTGTAAAAGATCTTTCGAGATTCTCCACTTATATTGCTTACGGCCAGTCCAAGCTTGCCAACATTTTGCACTCTACCGAGCTTGCACGAATTTTGAAGGGAGATGGTGTGAACATTTCAGCAAATGCGATCCATCCCGGTTTTGTTGGAACCAACCTATTCAAGAACTGGACTATGGCTAATGCTGTGGTGAACACCATTGGAAGAATCGTATGTAAAACTGTAGAACAGGGTGCTGCAACGACATGTTATGTGGCATTACATCCTCAAGTTACTGGAATAAGTGGGAAGTACTTCAGCAACTGCAATTTAGAGACCCCAAGCTCACAGGCTTCAAATGCAGAGTTGGCCAAGAAACTATGGGAATTTAGCTCCAACATTGTGTCGGCTGCCAAACTGTAGTTTGAGTTATTCATATATGCATGCGCTACATTTTATTTCGTGTAAGCCGAACATAAAATTTTCATAGAAAGTCTACAAATAAAGAGAGTGTAGTTCCTCCCAAAAAtcttc] [+] EMBL AU030642 [ TTTTACTGGAGAACATGAAGAGCACAAGTAGGACAACTGGTGTCGA AGGAAGGATCATAAATGTGTCGTCTTCGGGGCACA TTTTGACCTATCCTGAAGGGATATGTTTCGATAGTGTAAAAGATCTTTCGAGATTCTCCACTTATATTGCTTACGGCCAGTCCAAGCTTGCCAACATTTTGCACTCTACCGAGCTTGCACGAATTCTGAAGGGAGATGGTGTGAACATTTCAGCAAATGCGATCCATCCCGGTTTTGTTGGAACCAACCTATTCAAGAACTGGACTATGGCTAATGCTGTGGTGAACACCATTGGAAGAATCGTATGTAAAACTGTAGAACAGGGTGCTGCAACGACATGTTATGTGGCATTACATCCTCAAGTTACTGGAATAAGTGGGAAGTACTTCAGCAACTGCAATTTAGAGACCCCAAGCTCACAGGCTTCAAATGCAGAGTTGGCCAAGAAACTATGGGAATTTAGCTCCAACATTGTGTCGGCTGCCAAACTGTAGTTTGAGTTATTCATATATGCATGCGCTACATTTTATTTCGTGTAAGCCGAACATAAAATTTTCATAGAAAGTCTACAAATAAAGAGAGTGTAGTTCCTCCCAAAAAAAA ] [+] EMBL AU030610 [ TGANGTGCNCANGTNGNTCNNCTGGTGTCGANGGGACGGNTCATAAATGTGTCGTCTTCGGGGCACATTTTTGACCTATCCTGAAGGGATATGTTTCGATCGTGTAAAAGNTCTTTCGAGATTCTCCACTTATATTGCTTNCGGCCNGTCCANGCTTGCCAACNTTTTGCACTCTNCCGNGCTTGCACGAATTCTGANGGGNGATGGTGTGAACATTTCAGCAAATGCGATCCATCCCGGTTTTGTTGGAACCAACCTATTCAAGAACTGGNCTATGGCTNATGCTGTGGTGAACACCATTGGNNGAATCGTATGTAAAACTGTNGAACAGGGTGCTGCAACGACATGTTATGTGGCATTACATCCTCAAGTTACTGGAATAAGTGGGAAGTACTTCAGCNACTGCNATTTAGAGACCCCAAGCTCACAGGCTTCAAATGCNGNGTTGGCCAAGAAACTATGGGNATTTAGCTCCAACATTGTGTCGGCTGCCAAACTGTNGTTTGAGTTATTCATATATGCATGCGCTACATTTTATTTCGTGTAAGCCGAACATAAAATTTTCATAGAAAGTCTACAAATAAAGAGNGTGTNGTTCCTCCCAAAAAAAA ] [+] EMBL CB684467 [ GTGGGCAGTACTTCAGCAACTGCAATTTAGAGACCCCAAGCTCACAGGCTTCAAATGCAGAGTTGGCCAAGAAACTATGGGAATTTAGCTCCAACATTGTGTCGGCTGCCAAACTGTAGTTTGAGTTATTCATATATGCATGCGCTACATTTTATTTCGTGTAAGCCGAACATAAAATTTTCATAGAAAGTCTACAAATAAAGAGAGTGT ] consensusID : consensus_13114#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 786 fasta sequence [AGAAGACGATGTGGTTGCGCCGACGACGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTCGTTGTCCCTGCTCGCCAGGTGCTCGGTACAATGCCCCACTGTGCGCTTTGTTTCTTCAGAATATTAGTAGAACTCTTTGAAAGAAGTTAGAAGTTAGTACCTTGTTCTCTTCGGAATGTTTGTTTTCCTATGTTCTTAGGGTGCATGGCATCATTTGTGATGCTGTTAGAAATGGTCAAACCACTTAAATCACCAATTGGCATTGGCACACTTGGAATTAACTTGGAAGTGATTTGTTCATGCATATTGATATCAGCGTCTCCATCGCCTGCAGTTGCTCCTCCAGACTGCAGCTAGCGTGACGAGAAACATCTTCTTGAGACGATATCAGAAGGTTTTCTCTACAAGCTTCCCTTCGATCGTGTAGCCAGCATCTGTAGGCTATAGCTCGTTAGCTGTAAAACTTGTGCTAGCTCGTTTATTGGTTCTTTCATTTGTTTCCTGTTAGTCAGTTTCTCCTCCCCCAGTTTTTTAGCTTGTTCTCTTCTGTTTTCCAGTCGAGTGCATGACTGCGATTTGCTCGGTCGTGCACATGTCGAGCTTGACGTGCGCTTAGTCCGCACGGAGCGCGTCGCGCGGCTTGATCCCACGTTTTTACTTTCTGTACTGAATAAAAGGAAGAAAAAACAGAGAAAATGCTGGAACGTTTCTACGCAGCGCCAAAACACACCTGAGTTCATCGTGTTCTTGTGTTCATTCTCTCTCGC] [+] EMBL CB645961 [AGAAGACGATGTGGTTGCGCCGACGACGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTCGTTGTCCCTGCTCGCCAGGTGCTCGGTACAATGCCCCACTGTGCGCTTTGTTTCTTCAGAATATTAGTAGAACTCTTTGAAAGAAGTTAGAAGTTAGTACCTTGTTCTCTTCGGAATGTTTGTTTTCCTATGTTCTTAGGGTGCATGGCATCATTTGTGATGCTGTTAGAAATGGTCAAACCACTTAAATCACCAATTGGCATTGGCACACTTGGAATTAACTTGGAAGTGATTTGTTCATGCATATTGATATCAGCGTCTCCATCGCCTGCAGTTGCTCCTCCAGACTGCAGCTAGCGTGACGAGAAACATCTTCTTGAGACGATATCAGAAGGTTTTCTCTACAAGCTTCCCTTCGATCGTGTAGCCAGCATCTGTAGGCTATAGCTCGTTAGCTGTAAAACTTGTGCTAGCTCGTTTATTGGTTCTTTCATTTGTTTCCTGTTAGTCAGTTTCTCCTCCCCCAGTTTTTTAGCTTGTTCTCTTCTGTTTTCCAGTCGAGTGCATGACTGCGATTTGCTCGGTCGTGCACATGTCGAGCTTGACGTGCGCTTAGTCCGCACGGAGCGCGTCGCGCGGCTTGATCCCACGTTTTTACTTTCTGTACTGAATAAAAGGAAGAAAAAACAGAGAAAATGCTGGAACGTTTCTACGCAGCGCCAAAACACACCTGAGTTCATCGTGTTCTTGTGTTCATTCTCTCTCGC] consensusID : consensus_13114#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 582 fasta sequence [CTTATATTGCTTACGGCCAGTCCAAGCTTGCCAACATTTTGCACTCTACCGAGCTTGCACGAATTCTGAAGGTAGTGTTCTTATTTGCTAAGCATGCCTATGAGTAAATTTTGTATGTTGTCTCTGTTTGCATATGATTATAGCCAAATCTATGAATCATAAGTTGGAAACCGTTAAGTATGAATAGGGAGATGGTGTGAACATTTCAGCAAATGCGATCCATCCCGGTTTTGTTGGAACCAACCTGTTCAAGAACTGGACTATGGCTAATGGTAATCCCTAGACCTTTCAATGCAAAATTGTTGAAGATATTTTTGGAATAAATTAGTAGTACTTGAAGAAGCATACTCTTAAAAATATTAATTTGGGATGATTCCCAAACATTTTGATCCTTGCTATCTGGCGTGGAAAGGTTGCATCTCCTAAACACATGATGCTATTTGTGAATGCATCTCCTTTTATACCATTATACCATTTTCAATTGTTCTTCTCCATTACAGCTGTGGTGAACACCATTGGAAGAATCGTATGTAAAACTGTAGNNCANGGTGCTGCAACGACATGTTATGTGGCANNACATCC] [+] EMBL CF197298 [CTTATATTGCTTACGGCCAGTCCAAGCTTGCCAACATTTTGCACTCTACCGAGCTTGCACGAATTCTGAAGGTAGTGTTCTTATTTGCTAAGCATGCCTATGAGTAAATTTTGTATGTTGTCTCTGTTTGCATATGATTATAGCCAAATCTATGAATCATAAGTTGGAAACCGTTAAGTATGAATAGGGAGATGGTGTGAACATTTCAGCAAATGCGATCCATCCCGGTTTTGTTGGAACCAACCTGTTCAAGAACTGGACTATGGCTAATGGTAATCCCTAGACCTTTCAATGCAAAATTGTTGAAGATATTTTTGGAATAAATTAGTAGTACTTGAAGAAGCATACTCTTAAAAATATTAATTTGGGATGATTCCCAAACATTTTGATCCTTGCTATCTGGCGTGGAAAGGTTGCATCTCCTAAACACATGATGCTATTTGTGAATGCATCTCCTTTTATACCATTATACCATTTTCAATTGTTCTTCTCCATTACAGCTGTGGTGAACACCATTGGAAGAATCGTATGTAAAACTGTAGNNCANGGTGCTGCAACGACATGTTATGTGGCANNACATCC] consensusID : consensus_13114#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 474 fasta sequence [TTTTGCAGGAGATGTTGGAAGAAGAAGAGGAAGTGGTTGCGCCGACGACGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTCGTTGTCCCTGCTCGCCAGGTGCTCGTTGCTCCTCCAGACTGCAGCTAGCGTGACGAGAAACATCTTCTTGAGACGATATCAGAAGGTTTTCTCTACAAGCTTCCCTTCGATCGTGTAGCCAGCATCTGTAGGCTATAGCTCGTTAGCTGTAAAACTTGTGCTAGCTCGTTTATTGGTTCTTTCATTTGTTTCCTGTTAGTCAGTTTCTCCTCCCCCAGTTTTTTAGCTTGTTCTCTTCTGTTTTCCAGTCGAGTGCATGACTGCGATTTGCTCGGTCGTGCACATGTCGAGCTTGACGTGCGCTTAGTCCGCACGGAGCGCGTCGCGCGGCTTGATCCCACGTTTTTACTTTCTGTACTGAATAAAAGGAAGA] [+] EMBL AK062860 [TTTTGCAGGAGATGTTGGAAGAAGAAGAGGAAGTGGTTGCGCCGACGACGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTCGTTGTCCCTGCTCGCCAGGTGCTCGTTGCTCCTCCAGACTGCAGCTAGCGTGACGAGAAACATCTTCTTGAGACGATATCAGAAGGTTTTCTCTACAAGCTTCCCTTCGATCGTGTAGCCAGCATCTGTAGGCTATAGCTCGTTAGCTGTAAAACTTGTGCTAGCTCGTTTATTGGTTCTTTCATTTGTTTCCTGTTAGTCAGTTTCTCCTCCCCCAGTTTTTTAGCTTGTTCTCTTCTGTTTTCCAGTCGAGTGCATGACTGCGATTTGCTCGGTCGTGCACATGTCGAGCTTGACGTGCGCTTAGTCCGCACGGAGCGCGTCGCGCGGCTTGATCCCACGTTTTTACTTTCTGTACTGAATAAAAGGAAGA] consensusID : consensus_13114#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 367 fasta sequence [AGAAGAGGAAGTGGTTGCGCCGACGACGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTCGTTGTCCCTGCTCGCCAGGTGCTCGGTTGTCGCTGACATACTGCTGAGCAGAAAACCAGCACCCATCGGCTTAGTACCTGTCTGCTCTGCTGTCTCAGCCTCTCAGGTTGCAAACCCCATATCCCAGAGCTCGACGCCACCCATGTGGTTTTTCAACTTCAACCGAAATGGCCCCTCTGGCTTCTCCGGCGCCTCCACCGCCGAGGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCNGTCGTCACAGGCGCGTCG-AC-GGCATCGGGCTGGAGAAGACGCGC] [+] EMBL AU162306 [AGAAGAGGAAGTGGTTGCGCCGACGACGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTCGTTGTCCCTGCTCGCCAGGTGCTCGGTTGTCGCTGACATACTGCTGAGCAGAAAACCAGCACCCATCGGCTTAGTACCTGTCTGCTCTGCTGTCTCAGCCTCTCAGGTTGCAAACCCCATATCCCAGAGCTCGACGCCACCCATGTGGTTTTTCAACTTCAACCGAAATGGCCCCTCTGGCTTCTCCGGCGCCTCCACCGCCGAGGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCNGTCGTCACAGGCGCGTCG AC GGCATCGGGCTGGAGAAGACGCGC] [+] EMBL AU165848 [AGAAGAGGAAGTGGTTGCGCCGACGACGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTCGTTGTCCCNGCTCGCCAGGNGCTCGGTTGTCGCTGACATACNGCTGAGCAGAAAACCAGCACCCATCGGCTTAGTACCTGTCTGCTCTGCTGTCTCAGCCTCTCAGGTTGCAAACNCCATATCCCAGAGCTCGACGCCACCCATGTGGTTTTTCAACTTCAACCGAAATGGCCCCTCTGGCTTCTCCGGCGCCTCCACCGCCGAGGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGGCGCGTCGAACGGGCATCGGGCTGGAGACGA ] consensusID : consensus_13114#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 275 fasta sequence [CGGCCTAGAATTGCATTTTGCAACTAATCACATTGGCCATTTTCTTCTAACGAATCTTTTACTGGAGAACATGAAGAGCACAAGTAGGACAACTGGTGTCGAAGGAAGGATCATAAATGTGTCGTCTTCGGGGCACATTTTGACCTATCCTGAAGGGATATGTTTCGATAGTGTAAAAGATCTTTCGAGATTCTCCACTTATATTGCTTACGGCCAGTCCAAGCTTGCCAACATNNNGCACTCTACCGAGCTTNNNNNNNTTCTNNNNNNNGNNG] [+] EMBL CF196401 [CGGCCTAGAATTGCATTTTGCAACTAATCACATTGGCCATTTTCTTCTAACGAATCTTTTACTGGAGAACATGAAGAGCACAAGTAGGACAACTGGTGTCGAAGGAAGGATCATAAATGTGTCGTCTTCGGGGCACATTTTGACCTATCCTGAAGGGATATGTTTCGATAGTGTAAAAGATCTTTCGAGATTCTCCACTTATATTGCTTACGGCCAGTCCAAGCTTGCCAACATNNNGCACTCTACCGAGCTTNNNNNNNTTCTNNNNNNNGNNG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13114#0 ------------------------------------------------------------ consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 AGAAGACGATGTGGTTGCGCCGACGACGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCG 60 consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 ------------------------------------------------------------ consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 CGCGCCGGCTTCGGGTGTCGTTGTCCCTGCTCGCCAGGTGCTCGGTACAATGCCCCACTG 120 consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 ------------------------------------------------------------ consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 TGCGCTTTGTTTCTTCAGAATATTAGTAGAACTCTTTGAAAGAAGTTAGAAGTTAGTACC 180 consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 ---------------------------------AAGAAGAGGAAGTGGTTGCGCCGACGA 27 consensus_13114#4 ----------------------------------AGAAGAGGAAGTGGTTGCGCCGACGA 26 consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 -----------CTTATATTGCTTACGGCCAGTCCAAGCTTGCCAACATTTTGCACTCTAC 49 consensus_13114#1 TTGTTCTCTTCGGAATGTTTGTTTTCCTATGTTCTTAGGGTGCATGGCATCATTTGTGAT 240 consensus_13114#3 -----------------------------------------------TTTTGCAGGAGAT 13 consensus_13114#0 CGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTC-GTTGTC 86 consensus_13114#4 CGAGGTGAGCGGGTTGACGGAGGAGGAGGCAGCGCGCGCCGGCTTCGGGTGTC-GTTGTC 85 consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 CGAGCTTGCACGAATTCTGAAGGTAGTGTTCTTATTTGCTAAGCATGCCTATGAGTAAAT 109 consensus_13114#1 GCTGTTAGAAATGGTCAAACCACTTAAATCACCAATTGGCATTGGCACACTTGGAATTAA 300 consensus_13114#3 GTTGGAAGAAGAAGAGGAAGTGGTTGCGCCGACGAC-GAGGTGAGCGGGTT---GACGGA 69 consensus_13114#0 CCTGCTCGCCAGGTGCTCGTTGCTCCTCCAGACTGCAGCTAGCGTGACGAGA---AACAT 143 consensus_13114#4 CCTGCTCGCCAGGTGCTCG----------------------------------------- 104 consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 TTTGTATGTTGTCTCTGTTTGCATATGATTATAGCCAAATCTATGAATCATA---AGTTG 166 consensus_13114#1 CTTGGAAGTGATTTGTTCATGCATATTGATATCAGCGTCTCCA-TCGCCTG----CAGTT 355 consensus_13114#3 GGAGGAGGCAGCGCGCGCCGGCTT-CGGGTGTCGTTGTCCCTGCTCGCCAGGTGCTCGTT 128 consensus_13114#0 CTTCTTGAGACGATATCAGAAGGTTGTCGCTGACATACTGCTGAGCAGAAAACCAGCACC 203 consensus_13114#4 ----------------------GTTGTCGCTGACATACTGCTGAGCAGAAAACCAGCACC 142 consensus_13114#5 --------------------CGGCCTAGAATTGCATTTTGCAACTAATCACATTGGCCAT 40 consensus_13114#2 GAAACCGTTAAGTATGAATAGGGAGATGGTGTGAACATTTCAGCAAATGCGATCCATCCC 226 consensus_13114#1 GCTCCTCCAGACTGCAGCTAGCGTGACGAGAAACATCTTCTTG-AGACGATATCAGAAGG 414 consensus_13114#3 GCTCCTCCAGACTGCAGCTAGCGTGACGAGAAACATCTTCTTG-AGACGATATCAGAAGG 187 * * * * * consensus_13114#0 CATCGGCTTAGTACCTGTCT--GCTCTGCTGTCTCAGCCTCTCAGGTTGCAAACCCCATA 261 consensus_13114#4 CATCGGCTTAGTACCTGTCT--GCTCTGCTGTCTCAGCCTCTCAGGTTGCAAACCCCATA 200 consensus_13114#5 TTTCTTCTAACGAATCTTTT--ACTGGAGAACATGAAGAGCACAAGTAGGACAACTGGTG 98 consensus_13114#2 GGTTTTGTTGGAACCAACCT--GTTCAAGAACTGGACTATGGCTAATGGTAATCCCTAGA 284 consensus_13114#1 TTTTCTCTACAAGCTTCCCTTCGATCGTGTAGCCAGCATCTGTAGGCTATAGCTCGTTAG 474 consensus_13114#3 TTTTCTCTACAAGCTTCCCTTCGATCGTGTAGCCAGCATCTGTAGGCTATAGCTCGTTAG 247 * * * * * * consensus_13114#0 TC---CCAGA---GCTCG-----ACGCCACCCATGTGGTT--TTTCAACTTCAACCGAAA 308 consensus_13114#4 TC---CCAGA---GCTCG-----ACGCCACCCATGTGGTT--TTTCAACTTCAACCGAAA 247 consensus_13114#5 TC---GAAGGAAGGATCATAAATGTGTCGTCTTCGGGGCACATTTTGACCTATCCTGAAG 155 consensus_13114#2 CCTTTCAATGCAAAATTGTTG--AAGATATTTTTGGAATAAATTAGTAGTACTTGAAGAA 342 consensus_13114#1 CTGTAAAACTTGTGCTAGCTCGTTTATTGGTTCTTTCATTTGTTTCCTGTTAGTCAGTTT 534 consensus_13114#3 CTGTAAAACTTGTGCTAGCTCGTTTATTGGTTCTTTCATTTGTTTCCTGTTAGTCAGTTT 307 * * ** consensus_13114#0 TGGCCCCTCTGGC---------TTCTCCGGCG-CCTCCACCGCCGAGGAGGTCACCGCCG 358 consensus_13114#4 TGGCCCCTCTGGC---------TTCTCCGGCG-CCTCCACCGCCGAGGAGGTCACCGCCG 297 consensus_13114#5 GGATATGTTTCGA---------TAGTGTAAAA-GATCTTTCG--AGATTCTCCACTTATA 203 consensus_13114#2 GCATACTCTTAAAAATAT----TAATTTGGGATGATTCCCAAACATTTTGATCCTTGCTA 398 consensus_13114#1 CTCCTCCCCCAGTTTTTTAGCTTGTTCTCTTCTGTTTTCCAGTCGAGTGCATGACTGCGA 594 consensus_13114#3 CTCCTCCCCCAGTTTTTTAGCTTGTTCTCTTCTGTTTTCCAGTCGAGTGCATGACTGCGA 367 * * * consensus_13114#0 G-----CGTCGACGCCCGGGGCTTGGCCGCCGT-CGTCACAGGCGC-GTCGA-GCGGCAT 410 consensus_13114#4 G-----CGTCGACGCCCGGGGCTTGGCCGCNGT-CGTCACAGGCGC-GTCGA--CGGCAT 348 consensus_13114#5 T-----TGCTTACGGCCAGTCCAAGCTTGCCAA-CATNNNGCACTCTACCGA-GCTTNNN 256 consensus_13114#2 T-----CTGGCGTGGAAAGGTTGCATCTCCTAAACACATGATGCTATTTGTG-AATGCAT 452 consensus_13114#1 TTTGCTCGGTCGTGCACATGTCGAGCTTGACGTGCGCTTAGTCCGCACGGAGCGCGTCGC 654 consensus_13114#3 TTTGCTCGGTCGTGCACATGTCGAGCTTGACGTGCGCTTAGTCCGCACGGAGCGCGTCGC 427 * * * consensus_13114#0 CGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGGCGTGCGCGTCGTCATGGCCGTGCG 470 consensus_13114#4 CGGGCTGGAGAAGACGCGC----------------------------------------- 367 consensus_13114#5 NNNNTTCTNNNNNNNGNNG----------------------------------------- 275 consensus_13114#2 CTCCTTTTATACCATTATACCATTTTCAATTGTTCTTCTCCATTACAGCTGTGGTGAACA 512 consensus_13114#1 GCGGCTTGATCCCACGTTTTTACTTTCTGTACTGAATAAAAGGAAGAAAAAACAGAGAAA 714 consensus_13114#3 GCGGCTTGATCCCACGTTTTTACTTTCTGTACTGAATAAAAGGAAGA------------- 474 * consensus_13114#0 CAACGTCGCCGCCGGGCACAAGGCCCGCGAGGCGATCCGGGCGGAGATCCACGGCGCCAT 530 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 CCATTGGAAGAATCGTATGTAAAACTGTAGNNCANGGTGCTGCAACGACATGTTATGTGG 572 consensus_13114#1 ATGCTGGAACGTTTCTACGCAGCGCCAAAACACACCTGAGTTCATCGTGTTCTTGTGTTC 774 consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 AGTCCATGTGCTGGAGATGGACCTCAGCTCCATGGATTCGGTGAGGAGGTTTGCCTCCGA 590 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 CANNACATCC-------------------------------------------------- 582 consensus_13114#1 ATTCTCTCTCGC------------------------------------------------ 786 consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 GTTTGACTCTCTGAACCTACCTCTCAACATACTCATCAATAACGCTGGAATCCTGTCCAA 650 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 GGACTGCATACGCTCCATTGACGGCCTAGAATTGCATTTTGCAACTAATCACATTGGCCA 710 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 TTTTCTTCTAACGAATCTTTTACTGGAGAACATGAAGAGCACAAGTAGGACAACTGGTGT 770 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 CGAAGGAAGGATCATAAATGTGTCGTCTTCGGGGCACATTTTGACCTATCCTGAAGGGAT 830 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 ATGTTTCGATAGTGTAAAAGATCTTTCGAGATTCTCCACTTATATTGCTTACGGCCAGTC 890 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 CAAGCTTGCCAACATTTTGCACTCTACCGAGCTTGCACGAATTCTGAAGGGAGATGGTGT 950 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 GAACATTTCAGCAAATGCGATCCATCCCGGTTTTGTTGGAACCAACCTATTCAAGAACTG 1010 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 GACTATGGCTAATGCTGTGGTGAACACCATTGGAAGAATCGTATGTAAAACTGTAGAACA 1070 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 GGGTGCTGCAACGACATGTTATGTGGCATTACATCCTCAAGTTACTGGAATAAGTGGGAA 1130 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 GTACTTCAGCAACTGCAATTTAGAGACCCCAAGCTCACAGGCTTCAAATGCAGAGTTGGC 1190 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 CAAGAAACTATGGGAATTTAGCTCCAACATTGTGTCGGCTGCCAAACTGTAGTTTGAGTT 1250 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 ATTCATATATGCATGCGCTACATTTTATTTCGTGTAAGCCGAACATAAAATTTTCATAGA 1310 consensus_13114#4 ------------------------------------------------------------ consensus_13114#5 ------------------------------------------------------------ consensus_13114#2 ------------------------------------------------------------ consensus_13114#1 ------------------------------------------------------------ consensus_13114#3 ------------------------------------------------------------ consensus_13114#0 AAGTCTACAAATAAAGAGAGTGTAGTTCCTCCCAAAAAAAATC 1353 consensus_13114#4 ------------------------------------------- consensus_13114#5 ------------------------------------------- consensus_13114#2 ------------------------------------------- consensus_13114#1 ------------------------------------------- consensus_13114#3 ------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||