cluster # 1312

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Oryza sativa
cluster # 1312 cluster # 1312 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1312#0 length = 548 sequences # 2

consensusID : consensus_1312#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 548
fasta sequence

                              [TAGCCGGAGCTTTCATAGATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGAGAGAGATCAGGTGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAGACGATGAACAAACTGGG-AACACACGAAACAAGGTGGG--A-G-ACATCATCG-AATCAGAG-ATGAACAATTAAACG-AGGCTATATATGACGATGACGGCTTAGTTGCCACC-AGACTCCTCGCAGCCCGGGGGCTTG-TAGGCGATGAAGCTGATGAGCTGCACCTGCCT-AACGTAGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGAGTCGGTGCACCCGAACATGGGCAGATTCCACATGGTCCAGTACCAGACGACGAAGTATCCAGGGGAACAGAGGAAGAACACGGTAGACAAAACCGACCTAGATGAAAACGAGGCAGGGAACCCACTAGGAACGGAGCAGGTACATCGAACTGAACAGGAG]

[+] EMBL CB965419             [TAGCCGGAGCTTTCATAGATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGAGAGAGATCAGGTGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAGACGATGAACAAACTGGG AACACACGAAACAAGGTGGG  A G ACATCATCG AATCAGAG ATGAACAATTAAACG AGGCTATATATGACGATGACGGCTTAGTTGCCACC AGACTCCTCGCAGCCCGGGGGCTTG TAGGCGATGAAGCTGATGAGCTGCACCTGCCT AACGTAGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGAGTCGGTGCACCCGAACATGGGCAGATTCCACATGGTCCAGTACCAGACGACGAAGTATCCAGGGGAACAGAGGAAGAACACGGTAGACAAAACCGACCTAGATGAAAACGAGGCAGGGAACCCACTAGGAACGGAGCAGGTACATCGAACTGAACAGGAG]
[+] EMBL CB965375             [TAGCCGGAGCTTTCATAGATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGAGAGAGATCAGGTGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAGACGATGAACAAACTGGGCAACACACGAAACAAGGTGGGTCACGCACATCATCGCAATCAGAGCATGAACAATTAAACGCAGGCTATATATGACGATGACGGCTTAGTTGCCACCAAGACTCCTCGCAGCCCGGGGGCTTGATAGGCGATGAAGCTGATGAGCTGCACCTGCCTAAACGT GTCGAAGCCGAAGATACGGACGAATGCAT                                                                                                                                                                                                                 ]




>consensus_1312#0
TAGCCGGAGCTTTCATAGATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAG
CAGATACCACTCTTACATCAAGTCAGAGAGAGATCAGGTGAAACAAAAACAAAAGCAGAG
CACGGCCGGTAAAATCAAAAGACGATGAACAAACTGGGAACACACGAAACAAGGTGGGAG
ACATCATCGAATCAGAGATGAACAATTAAACGAGGCTATATATGACGATGACGGCTTAGT
TGCCACCAGACTCCTCGCAGCCCGGGGGCTTGTAGGCGATGAAGCTGATGAGCTGCACCT
GCCTAACGTAGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACGCCTTCTTGGCCT
CCTCGAGCTCCTTGAGCACCTGGGTGGAGTCGGTGCACCCGAACATGGGCAGATTCCACA
TGGTCCAGTACCAGACGACGAAGTATCCAGGGGAACAGAGGAAGAACACGGTAGACAAAA
CCGACCTAGATGAAAACGAGGCAGGGAACCCACTAGGAACGGAGCAGGTACATCGAACTG
AACAGGAG

clustalw multiple alignements is not computed in this case