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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13137#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1404 fasta sequence
[ACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG-AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC-TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT--CCC-GGGAAGA-CTTGACC-GTC-AT-CCCCAA-GTTCGCCTACC-GC-AC-CTACGCCGGGCAGG-TGAGGCAGCAGGGGGAGCACGAGAGCC-TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG-TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC-AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA-CGGCGGGCCA-CCTGTTCCCCATCA-CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTATGCCTCGTTTCATCTNCC]
[+] EMBL AK099017 [ACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATT ]
[+] EMBL AK061527 [ CCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTTTGCCT ]
[+] EMBL AK119210 [ CCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTtt ]
[+] EMBL AK104452 [ CCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGT ]
[+] EMBL CB649885 [ ATTCCCCTCCACCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCACCCCCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTAC ]
[+] EMBL CB669158 [ ACCTCCTCTCTCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTTCACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA ]
[-] EMBL CB669159 [ GTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTAGGCCTCGTTTCATCTNCC]
[-] EMBL CB649886 [ CCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGGAAACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCGTATTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCGGATATAGAGAAATGACAATAATATTTTGCGGAG ]
[+] EMBL BI812288 [ AACACCCAGAAGCTCTTCCCGCCCATCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCCGTGCACCGGGACATGCTGGTGGGGTTCGGGAAATGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGCAAGCTGTC CGGCACATCGCGCAGCGGCTCCCGTGGGT CGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCAaaaaaa ]
[+] EMBL BI806429 [ acCCCCGCCATCCTCTTCCCCGGGGAAGACCTTGACCGGTCAATCCCCCAAGGTTCGCCTACCGGCAACACTACGCC GGCAGGTTGA GCA CA GGGGAGCACGAGACCC T CACCGGGACAT CTGTTGGGTTTCGGAAATTGGGGGTTGGAGCCCCCTGGAGATGGAGAACCCGTTCCCGGCGGGCGA GC GCGGTGCACCTGT GCACGGCGCGGAGGACCTCATCGTGCCCGT C AGCTGTCGCGGCACATCGCGCAGCGGCT CCGTGGGTGCGGTACCACGAGCTGCCCACCGGC GGCCANCCTGTTCCCCATCACCCGAAGGGAT CCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGAC ATAATATTTTGCGGAGTCAaaaaaaa ]
consensusID : consensus_13137#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 589 fasta sequence
[AGTAGTAAAAAAAGGGATAGTACTCGTAACTCGCGAAGGCGATAGGAGGGTGCGCATGCGCGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGACACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTCGTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGTCCATCGCCTTTTTGCTTTGTTAATTTCTCGTGTTCAACGCAGCGTTTGTTTCGTAGTACGTCGTCGTAGCCTGTTCGTGATTTGCCACCGCTCCCTGTTTTTACAATTTTGCTGTATAATCAGCTCGGTTGCGGTCTCGATCTCAAGATTGACACTATCTCACATAAAT]
[-] EMBL CF313333 [AGTAGTAAAAAAAGGGATAGTACTCGTAACTCGCGAAGGCGATAGGAGGGTGCGCATGCGCGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGACACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTCGTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGTCCATCGCCTT ]
[+] EMBL AK107958 [ GGTGCGCATGCGCGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGACACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTCGTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGCCCATCGCCTTTTTGCTTTGTTAATTTCTCGTGTTCAACGCAGCGTTTGTTTCGTAGTACGTCGTCGTAGCCTGTTCGTGATTTGCCACCGCTCCCTGTTTTTACAATTTTGCTGTATAATCAGCTCGGTTGCGGTCTCGATCTCAAGATTGACACTATCTCACATAAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13137#0 ------------------------------------------------------------
consensus_13137#1 AGTAGTAAAAAAAGGGATAGTACTCGTAACTCGCGAAGGCGATAGGAGGGTGCGCATGCG 60
consensus_13137#0 ------------------------------------------------------------
consensus_13137#1 CGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGA 120
consensus_13137#0 ---------------------------------ACCCTCGCGCACTCCCATTCCCATCCT 27
consensus_13137#1 CACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCT 180
***************************
consensus_13137#0 CCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCA 87
consensus_13137#1 CCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCA 240
************************************************************
consensus_13137#0 CCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGG 147
consensus_13137#1 CCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGG 300
************************************************************
consensus_13137#0 CGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTC 207
consensus_13137#1 CGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTC 360
******************************************************** **
consensus_13137#0 ---CAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTG--TACCGGCAG 262
consensus_13137#1 GTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGT 420
* * * ** * * * ** * * * * ***** * * * **
consensus_13137#0 CT-TCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCC 321
consensus_13137#1 CCATCGCCTTTTTGCTTTGTTAATTTCTCGTGTTCAACGCAGCGTTT-GTTTCGTAGTAC 479
* ** * * * * * *** * * * ** * ** * * * * *
consensus_13137#0 AAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTA-AGG 380
consensus_13137#1 GTCGTCGTAGCCTGTTCGTGATTTGCCACCGCTCC-CTGTTTTTACAATTTTGCTGTATA 538
* * *** ** ** * * * * *** * ** *
consensus_13137#0 ATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCC 440
consensus_13137#1 ATCAGCTCGGTTGCGGTCTCGATCTCAAGATTGACACTATCTCACATAAAT--------- 589
***** * * ** ** ** * *** * **
consensus_13137#0 TCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTC 500
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 CTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACA 560
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 TCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCA 620
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 TGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGT 680
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 CAATCCTGGGGCCGGTGGGGAACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGG 740
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 AGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCC 800
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 CCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCCTCCAGCGTCATCTCCT 860
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 TCAACCCCGCCATCCTCTCCCGGGAAGACTTGACCGTCATCCCCAAGTTCGCCTACCGCA 920
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 CCTACGCCGGGCAGGTGAGGCAGCAGGGGGAGCACGAGAGCCTGCACCGGGACATGCTGG 980
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 TGGGGTTCGGGAAGTGGGGGTGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCG 1040
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 AGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGCAGCTGTCGC 1100
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 GGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCACGGCGGGCCACC 1160
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 TGTTCCCCATCACCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACG 1220
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 AGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGA 1280
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 ATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTAT 1340
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 CCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTATGCCTCGTTTCATC 1400
consensus_13137#1 ------------------------------------------------------------
consensus_13137#0 TNCC 1404
consensus_13137#1 ----
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||