These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13137#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1404 fasta sequence [ACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG-AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC-TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT--CCC-GGGAAGA-CTTGACC-GTC-AT-CCCCAA-GTTCGCCTACC-GC-AC-CTACGCCGGGCAGG-TGAGGCAGCAGGGGGAGCACGAGAGCC-TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG-TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC-AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA-CGGCGGGCCA-CCTGTTCCCCATCA-CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTATGCCTCGTTTCATCTNCC] [+] EMBL AK099017 [ACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATT ] [+] EMBL AK061527 [ CCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTTTGCCT ] [+] EMBL AK119210 [ CCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTtt ] [+] EMBL AK104452 [ CCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGT ] [+] EMBL CB649885 [ ATTCCCCTCCACCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCACCCCCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTAC ] [+] EMBL CB669158 [ ACCTCCTCTCTCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTTCACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA ] [-] EMBL CB669159 [ GTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTAGGCCTCGTTTCATCTNCC] [-] EMBL CB649886 [ CCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGGAAACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCGTATTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCGGATATAGAGAAATGACAATAATATTTTGCGGAG ] [+] EMBL BI812288 [ AACACCCAGAAGCTCTTCCCGCCCATCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCCGTGCACCGGGACATGCTGGTGGGGTTCGGGAAATGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGCAAGCTGTC CGGCACATCGCGCAGCGGCTCCCGTGGGT CGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCAaaaaaa ] [+] EMBL BI806429 [ acCCCCGCCATCCTCTTCCCCGGGGAAGACCTTGACCGGTCAATCCCCCAAGGTTCGCCTACCGGCAACACTACGCC GGCAGGTTGA GCA CA GGGGAGCACGAGACCC T CACCGGGACAT CTGTTGGGTTTCGGAAATTGGGGGTTGGAGCCCCCTGGAGATGGAGAACCCGTTCCCGGCGGGCGA GC GCGGTGCACCTGT GCACGGCGCGGAGGACCTCATCGTGCCCGT C AGCTGTCGCGGCACATCGCGCAGCGGCT CCGTGGGTGCGGTACCACGAGCTGCCCACCGGC GGCCANCCTGTTCCCCATCACCCGAAGGGAT CCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGAC ATAATATTTTGCGGAGTCAaaaaaaa ] consensusID : consensus_13137#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 589 fasta sequence [AGTAGTAAAAAAAGGGATAGTACTCGTAACTCGCGAAGGCGATAGGAGGGTGCGCATGCGCGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGACACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTCGTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGTCCATCGCCTTTTTGCTTTGTTAATTTCTCGTGTTCAACGCAGCGTTTGTTTCGTAGTACGTCGTCGTAGCCTGTTCGTGATTTGCCACCGCTCCCTGTTTTTACAATTTTGCTGTATAATCAGCTCGGTTGCGGTCTCGATCTCAAGATTGACACTATCTCACATAAAT] [-] EMBL CF313333 [AGTAGTAAAAAAAGGGATAGTACTCGTAACTCGCGAAGGCGATAGGAGGGTGCGCATGCGCGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGACACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTCGTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGTCCATCGCCTT ] [+] EMBL AK107958 [ GGTGCGCATGCGCGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGACACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTCGTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGCCCATCGCCTTTTTGCTTTGTTAATTTCTCGTGTTCAACGCAGCGTTTGTTTCGTAGTACGTCGTCGTAGCCTGTTCGTGATTTGCCACCGCTCCCTGTTTTTACAATTTTGCTGTATAATCAGCTCGGTTGCGGTCTCGATCTCAAGATTGACACTATCTCACATAAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13137#0 ------------------------------------------------------------ consensus_13137#1 AGTAGTAAAAAAAGGGATAGTACTCGTAACTCGCGAAGGCGATAGGAGGGTGCGCATGCG 60 consensus_13137#0 ------------------------------------------------------------ consensus_13137#1 CGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGA 120 consensus_13137#0 ---------------------------------ACCCTCGCGCACTCCCATTCCCATCCT 27 consensus_13137#1 CACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCT 180 *************************** consensus_13137#0 CCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCA 87 consensus_13137#1 CCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCA 240 ************************************************************ consensus_13137#0 CCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGG 147 consensus_13137#1 CCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGG 300 ************************************************************ consensus_13137#0 CGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTC 207 consensus_13137#1 CGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTC 360 ******************************************************** ** consensus_13137#0 ---CAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTG--TACCGGCAG 262 consensus_13137#1 GTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGT 420 * * * ** * * * ** * * * * ***** * * * ** consensus_13137#0 CT-TCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCC 321 consensus_13137#1 CCATCGCCTTTTTGCTTTGTTAATTTCTCGTGTTCAACGCAGCGTTT-GTTTCGTAGTAC 479 * ** * * * * * *** * * * ** * ** * * * * * consensus_13137#0 AAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTA-AGG 380 consensus_13137#1 GTCGTCGTAGCCTGTTCGTGATTTGCCACCGCTCC-CTGTTTTTACAATTTTGCTGTATA 538 * * *** ** ** * * * * *** * ** * consensus_13137#0 ATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCC 440 consensus_13137#1 ATCAGCTCGGTTGCGGTCTCGATCTCAAGATTGACACTATCTCACATAAAT--------- 589 ***** * * ** ** ** * *** * ** consensus_13137#0 TCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTC 500 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 CTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACA 560 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 TCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCA 620 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 TGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGT 680 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 CAATCCTGGGGCCGGTGGGGAACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGG 740 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 AGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCC 800 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 CCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCCTCCAGCGTCATCTCCT 860 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 TCAACCCCGCCATCCTCTCCCGGGAAGACTTGACCGTCATCCCCAAGTTCGCCTACCGCA 920 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 CCTACGCCGGGCAGGTGAGGCAGCAGGGGGAGCACGAGAGCCTGCACCGGGACATGCTGG 980 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 TGGGGTTCGGGAAGTGGGGGTGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCG 1040 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 AGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGCAGCTGTCGC 1100 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 GGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCACGGCGGGCCACC 1160 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 TGTTCCCCATCACCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACG 1220 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 AGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGA 1280 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 ATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTAT 1340 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 CCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTATGCCTCGTTTCATC 1400 consensus_13137#1 ------------------------------------------------------------ consensus_13137#0 TNCC 1404 consensus_13137#1 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||