cluster # 13148

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13148 cluster # 13148 Sequences # 12 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13148#0 length = 1970 sequences # 10

consensus_13148#1 length = 949 sequences # 2

consensusID : consensus_13148#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1970
fasta sequence

                              [CCTTCCCCGGATCAAGCAGCTAGGGTTTCCACCTCTCCCTCCCCCAAATCTTCTCCATGGCCGCCGCCGCCGCCGCCGACGCATCGGCCGAGGCCGCGGCCATCGCGCGGCGCCTGGCCTCCTGCAACGGCTCCGCACGGGAGCGCGCGGTGCGGCACCTCCTCTCCACCTTCCTCCCGGCCTCGGCTCCGCACCTCTCCGCCTCCGACCTCCTCAAGCTCTGGAAGGGCCTCTTCTTCTGCTTCTGGCACTCCGACAAGCCGCTCTACCAGTCCTCCCTCGCCACCCGCCTCGCCGCCGGCGTCTCCTCGGGCCCCTCGCCGGCCGCCGCCGCCGCCTTCTTCGCCGCCTACCTCGCCACCCTCCGCCGCGAGTGGGTCCACATCGACACCCACCGCCTCGACAAGTTCTACCTCCTCAACCGCAGGTTCCTCCACCACGCCTTCCTCCTCCTCGCCGCCAACTCCTTCGCCGCCGACCTCACCTCCCAGGTCGTATCGATCCTGTCGGAGAAGGTACTCCTTCCCGAGGCCGACAACGTCGCCGCCGGCTCGCCCCGTGGGCTTGGGTACCATGTCGCCGAGGTGTTTCTGGACGAGCTGTCGCCTGTGCTCCCTGTGAGCTTACAGACAATGGAGGTGTTGCTATCTCCTTTCTTCGCTGTGTTGGAGAAGTCATCTGATAGGGTGATGGTGGCTAAGGTTAAGTCTAGTGTGTTTGAGAGGTTCCTCGAGAGCGGCAAACAATTGCTCGAGATGGCGAAGAAAGGCGAGGGGGTGGAGAAGGGGAGCGCAGACGAGAAGATTGGGAAGGTTGGCTTGCTGTTTGGGTTCAGCAAGAGGTTCTCAGATATTGGGGCGAAGGCGGAGACCGTGCAAGCAAACCGAAAGGTGCTATTTGGGCTGAGGGATGCGTTTGTGAAGGTTGAGAAAGGATTGGAGCTCTCTGGGGTCGAGATTGCTGTGCCAGAGTTCAAGAGTACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGATGAGGTGAAGGTGGAGAAGAAGAAGAAGAAAAAGGCGAAGAAAGCTTCATTGGTGGAAGGTGAGACAGAGGGGGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAAAGAGAAGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGAAACAGAGTACAGACGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATGAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCAAGTGCTTTGCCCGC-TAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATAGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGAAGCCTTCCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCTTTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTCTATTATTACTTAATTCTTCA-CCTAGGTTAGTCTTATACGCTGTTGACTATGCAACAAATTTATATTTATGGATTGTTTAATGTTGTGTTATGTCATAGCGCATTCATGATAATCATGTGGGTGATCATTCTTTGGAATTAGCAGTAGCAATTTTGATCTGGAAAAAAAAAA]

[+] EMBL AK064729             [CCTTCCCCGGATCAAGCAGCTAGGGTTTCCACCTCTCCCTCCCCCAAATCTTCTCCATGGCCGCCGCCGCCGCCGCCGACGCATCGGCCGAGGCCGCGGCCATCGCGCGGCGCCTGGCCTCCTGCAACGGCTCCGCACGGGAGCGCGCGGTGCGGCACCTCCTCTCCACCTTCCTCCCGGCCTCGGCTCCGCACCTCTCCGCCTCCGACCTCCTCAAGCTCTGGAAGGGCCTCTTCTTCTGCTTCTGGCACTCCGACAAGCCGCTCTACCAGTCCTCCCTCGCCACCCGCCTCGCCGCCGGCGTCTCCTCGGGCCCCTCGCCGGCCGCCGCCGCCGCCTTCTTCGCCGCCTACCTCGCCACCCTCCGCCGCGAGTGGGTCCACATCGACACCCACCGCCTCGACAAGTTCTACCTCCTCAACCGCAGGTTCCTCCACCACGCCTTCCTCCTCCTCGCCGCCAACTCCTTCGCCGCCGACCTCACCTCCCAGGTCGTATCGATCCTGTCGGAGAAGGTACTCCTTCCCGAGGCCGACAACGTCGCCGCCGGCTCGCCCCGTGGGCTTGGGTACCATGTCGCCGAGGTGTTTCTGGACGAGCTGTCGCCTGTGCTCCCTGTGAGCTTACAGACAATGGAGGTGTTGCTATCTCCTTTCTTCGCTGTGTTGGAGAAGTCATCTGATAGGGCGATGGTGGCTAAGGTTAAGTCTAGTGTGTTTGAGAGGTTCCTCGAGAGCGGCAAACAATTGCTCGAGATGGCGAAGAAAGGCGAGGGGGTGGAGAAGGGGAGCGCAGACGAGAAGATTGGGAAGGTTGGCTTGCTGTTTGGGTTCAGCAAGAGGTTCTCAGATATTGGGGCGAAGGCGGAGACCGTGCAAGCAAACCGAAAGGTGCTATTTGGGCTGAGGGATGCGTTTGTGAAGGTTGAGAAAGGATTGGAGCTCTCTGGGGTCGAGATTGCTGTGCCAGAGTTCAAGAGTACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGATGAGGTGAAGGTGGAGAAGAAGAAGAAGAAAAAGGCGAAGAAAGCTTCATTGGTGGAAGGTGAGACAGAGGGGGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAAGAAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB670841             [                 AGCTAGGGTTTCCACCTCTCCCTCCCCCAAATCTTCTCCATGGCCGCCGCCGCCGCCGCCGACGCATCGGCCGAGGCCGCGGCCATCGCGCGGCGCCTGGCCTCCTGCAACGGCTCCGCACGGGAGCGCGCGGTGCGGCACCTCCTCTCCACCTTCCTCCCGGCCTCGGCTCCGCACCTCTCCGCCTCCGACCTCCTCAAGCTCTGGAAGGGCCTCTTCTTCTGCTTCTGGCACTCCGACAAGCCGCTCTACCAGTCCTCCCTCGCCACCCGCCTCGCCGCCGGCGTCTCCTCGGGCCCCTCGCCGGCCGCCGCCGCCGCCTTCTTCGCCGCCTACCTCGCCACCCTCCGCCGCGAGTGGGTCCACATCGACACCCACCGCCTCGACAAGTTCTACCTCCTCAACCGCAGGTTCCTCCACCACGCCTTCCTCCTCCTCGCCGCCAACTCCTTCGCCGCCGACCTCACCTCCCAGGTCGTATCGATCCTGTCGGAGAAGGTACTCCTTCCCGAGGCCGACAACGTCGCCGCCGGCTCGCCCCGTGGGCTTGGGTACCATGTCGCCGAGGTGTTTCTGGACGAGCTGTCGCCTGTGCTCCCTGTGAGCTTACAGACAATGGAGGTGTTGCTATCTCCTTTCTTCGCTGTGTTGGAGAAGTCATCTGATAGGGTGATGGTGGCTAAGGTTAAGTCTAGTGTGTTTGAGAGGTTCCTCGAGAGCGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK119253             [                                                                                       CCGAGGCCGCGGCCATCGCGCGGCGCCTGGCCTCCTGCAACGGCTCCGCACGGGAGCGCGCGGTGCGGCACCTCCTCTCCACCTTCCTCCCGGCCTCGGCTCCGCACCTCTCCGCCTCCGACCTCCTCAAGCTCTGGAAGGGCCTCTTCTTCTGCTTCTGGCACTCCGACAAGCCGCTCTACCAGTCCTCCCTCGCCACCCGCCTCGCCGCCGGCGTCTCCTCGGGCCCCTCGCCGGCCGCCGCCGCCGCCTTCTTCGCCGCCTACCTCGCCACCCTCCGCCGCGAGTGGGTCCACATCGACACCCACCGCCTCGACAAGTTCTACCTCCTCAACCGCAGGTTCCTCCACCACGCCTTCCTCCTCCTCGCCGCCAACTCCTTCGCCGCCGACCTCACCTCCCAGGTCGTATCGATCCTGTCGGAGAAGGTACTCCTTCCCGAGGCCGACAACGTCGCCGCCGGCTCGCCCCGTGGGCTTGGGTACCATGTCGCCGAGGTGTTTCTGGACGAGCTGTCGCCTGTGCTCCCTGTGAGCTTACAGACAATGGAGGTGTTGCTATCTCCTTTCTTCGCTGTGTTGGAGAAGTCATCTGATAGGGTGATGGTGGCTAAGGTTAAGTCTAGTGTGTTTGAGAGGTTCCTCGAGAGCGGCAAACAATTGCTCGAGATGGCGAAGAAAGGCGAGGGGGTGGAGAAGGGGAGCGCAGACGAGAAGATTGGGAAGGTTGGCTTGCTGTTTGGGTTCAGCAAGAGGTTCTCAGATATTGGGGCGAAGGCGGAGACCGTGCAAGCAAACCGAAAGGTGCTATTTGGGCTGAGGGATGCGTTTGTGAAGGTTGAGAAAGGATTGGAGCTCTCTGGGGTCGAGATTGCTGTGCCAGAGTTCAAGAGTACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGATGAGGTGAAGGTGGAGAAGAAGAAGAAGAAAAAGGCGAAGAAAGCTTCATTGGTGGAAGGTGAGACAGAGGGGGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAAAGAGAAGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGGAACAGAGTACAGACGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATGAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCAAGTGCTTTGCCCGC TAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATAGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGAAGCCTTCCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCTTTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTCTATTATTACTTAATTCTTCA CCTAGGTTAGTCTTATACGCTGTTGACTATGCAACAAATTTATATTTATGGATTGTTTA                                                                                            ]
[+] EMBL CB618445             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCCGCCGACCTCACCTCCCAGGTCGTATCGATCCTGTCGGAGAAGGTACTCCTTCCCGAGGCCGACAACGTCGCCGCCGGCTCGCCCCGTGGGCTTGGGTACCATGTCGCCGAGGTGTTTCTGGACGAGCTGTCGCCTGTGCTCCCTGTGAGCTTACAGACAATGGAGGTGTTGCTATCTCCTTTCTTCGCTGTGTTGGAGAAGTCATCTGATAGGGTGATGGTGGCTAAGGTTAAGTCTAGTGTGTTTGAGAGGTTCCTCGAGAGCGGCAAACAATTGCTCGAGATGGCGAAGAAAGGCGAGGGGGTGGAGAAGGGGAGCGCAGACGAGAAGATTGGGAAGGTTGGCTTGCTGTTTGGGTTCAGCAAGAGGTTCTCAGATATTGGGGCGAAGGCGGAGACCGTGCAAGCAAACCGAAAGGTGCTATTTGGGCTGAGGGATGCGTTTGTGAAGGTTGAGAAAGGATTGGAGCTCTCTGGGGTCGAGATTGCTGTGCCAGAGTTCAAGAGTACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGATGAGGTGAAGGTGG   AGAAGAAGAAGAAAAAGGTGAAGAAAGCTTCATTGGTGGAAGGTGAGACGGAGGGGGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAAAGAGAAGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGAAACAGAGTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB670842             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAAAGAGAAGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGGAACAGAGTACAGACGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATGAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCAAGTGCTTTGCCCGC TAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATAGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGAAGCCTTCCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCTTTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTCTATTATTACTTAATTCTTCA CCTAGGTTAGTCTTATACGCTGTTGACTATGCAACAAATTTATATTTATGGATTGTTTAATGTTGTGTTA                                                                                 ]
[-] EMBL CB618446             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAAAAAGGTCAAGAAGGAGAAGAAAGAGAAGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGAAACAGAGTACAGATGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATGAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCAAGTGCTTCGCCCGC TAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATAGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGAAGCCTTTCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCTTTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTCTATTATTACTTAATTCTTCA CCTAGGTTAGTCTTATACGCTGTTGACTATGCAACAAATTTATATTTATGGATTGTTTAA                                                                                           ]
[-] EMBL CB618405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTCACGAAACAGAGTACAGATGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATGAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCAAGTGCTTCGCCCGC TAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATAGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCTCCGCAGTGCTTGAGGGTGCCACCATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGAAGCCTTTTTCAGCCGTGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCTTTTAGGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTATATTATTACTTAATTGTTCACCCTAGGTCAGTCTTATACGCTGT                                                                                                                                ]
[-] EMBL CA759514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCAAGTGCTTCGCCCGCTTAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATAGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCATTTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATTTGCAAAGAAGGTCTTGAAGAAGCCTTTTTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGTACTCTTTTATGAATTGACACTGCAGTGATCATGCTTTTTGCATGGTGTGTCTTTTCAACCGTGTTCTATTATTACTTAATTCTTCA CCTAGGTTAGTTTTATACGCTGTTGACTATGCAACAAATTTATATTTATGGATTGTTTAATGTTGTGTTATGTCATAGCGCATTCATGATAATCATGTGGGTGATCATTCTTTGGAATTAGCAGTAGCAATTTTGATCTGGAAAAAAAAAA]
[-] EMBL CF314555             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTTTGCCCGC TAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATAGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGAAGCCTTCCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCTTTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTCTATTATTACTTAATTCTTCG CCTAGGTTAGTCTTATACGCTGTTGACTATGCAACAAATTTATATTTATGGATTGTTTAATGTTGTGTTATGTCATAGCGCATTCATGATAATCATGCGGGTGATCAaaaaa                                       ]
[+] EMBL BI805447             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCTTCCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCCNGAACTCTTTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTCTATTATTACTTAATTCTTCA CCTAGGTTAGTCTTATACGCTGTTGACTATGC ACCAATTTATATTTATGGATTGTTTAATGTTGTGTTAaaaaaa                                                                           ]




>consensus_13148#0
CCTTCCCCGGATCAAGCAGCTAGGGTTTCCACCTCTCCCTCCCCCAAATCTTCTCCATGG
CCGCCGCCGCCGCCGCCGACGCATCGGCCGAGGCCGCGGCCATCGCGCGGCGCCTGGCCT
CCTGCAACGGCTCCGCACGGGAGCGCGCGGTGCGGCACCTCCTCTCCACCTTCCTCCCGG
CCTCGGCTCCGCACCTCTCCGCCTCCGACCTCCTCAAGCTCTGGAAGGGCCTCTTCTTCT
GCTTCTGGCACTCCGACAAGCCGCTCTACCAGTCCTCCCTCGCCACCCGCCTCGCCGCCG
GCGTCTCCTCGGGCCCCTCGCCGGCCGCCGCCGCCGCCTTCTTCGCCGCCTACCTCGCCA
CCCTCCGCCGCGAGTGGGTCCACATCGACACCCACCGCCTCGACAAGTTCTACCTCCTCA
ACCGCAGGTTCCTCCACCACGCCTTCCTCCTCCTCGCCGCCAACTCCTTCGCCGCCGACC
TCACCTCCCAGGTCGTATCGATCCTGTCGGAGAAGGTACTCCTTCCCGAGGCCGACAACG
TCGCCGCCGGCTCGCCCCGTGGGCTTGGGTACCATGTCGCCGAGGTGTTTCTGGACGAGC
TGTCGCCTGTGCTCCCTGTGAGCTTACAGACAATGGAGGTGTTGCTATCTCCTTTCTTCG
CTGTGTTGGAGAAGTCATCTGATAGGGTGATGGTGGCTAAGGTTAAGTCTAGTGTGTTTG
AGAGGTTCCTCGAGAGCGGCAAACAATTGCTCGAGATGGCGAAGAAAGGCGAGGGGGTGG
AGAAGGGGAGCGCAGACGAGAAGATTGGGAAGGTTGGCTTGCTGTTTGGGTTCAGCAAGA
GGTTCTCAGATATTGGGGCGAAGGCGGAGACCGTGCAAGCAAACCGAAAGGTGCTATTTG
GGCTGAGGGATGCGTTTGTGAAGGTTGAGAAAGGATTGGAGCTCTCTGGGGTCGAGATTG
CTGTGCCAGAGTTCAAGAGTACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGATG
AGGTGAAGGTGGAGAAGAAGAAGAAGAAAAAGGCGAAGAAAGCTTCATTGGTGGAAGGTG
AGACAGAGGGGGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAAAGAGA
AGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGAAACAGAGTACAG
ACGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATG
AGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGG
TCAATGGAGGCAGCAGCTCAAGTGCTTTGCCCGCTAGTGGGAAAGCTGCAAAGAAAAGGA
AGAGAGCAAAATCTGCAGATAGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAG
GTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGA
ATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCAT
CTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAA
CGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGA
AGCCTTCCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCTTT
TATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTCT
ATTATTACTTAATTCTTCACCTAGGTTAGTCTTATACGCTGTTGACTATGCAACAAATTT
ATATTTATGGATTGTTTAATGTTGTGTTATGTCATAGCGCATTCATGATAATCATGTGGG
TGATCATTCTTTGGAATTAGCAGTAGCAATTTTGATCTGGAAAAAAAAAA

consensusID : consensus_13148#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 949
fasta sequence

                              [CATGGAACTGAAGGAGTAGAAACCAGAGTTCAAGAGTACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGATGAGGTGAAGGTGGAGAAGAAGAAGAAGAAAAAGGCGAAGAAAGCTTCATTGGTGGAAGGTGAGACAGAGGGGGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAGAGAGAAGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGGAACAGAGTACAGACGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATGAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCAAGTGCTTTGCCCGCTAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATAGGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGAAGCCTTTCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCTTTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTCTATTATTACTTAATTCTTCACCTAGGTTAGTCTTATACGCTGNTGACTATGCAACAAATCTATATTTATGGATTGGTTAATGGNTGGGGNTA]

[+] EMBL CF314554             [CATGGAACTGAAGGAGTAGAAACCAGAGTTCAAGAGTACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGATGAGGTGAAGGTGGAGAAGAAGAAGAAGAAAAAGGCGAAGAAAGCTTCATTGGTGGAAGGTGAGACAGAGGGGGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAGAGAGAAGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGGAACAGAGTACAGACGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATGAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCAAGTGCTTTGCCCGCTAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATAGGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA765131             [                                                                                                                                                                                                   gggGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGAAACAGAGTACAGATGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATGAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCAAGTGCTTCGCCCGCTAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATA GGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGAAGCCTTTCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCTTTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTCTATTATTACTTAATTCTTCACCTAGGTTAGTCTTATACGCTGNTGACTATGCAACAAATCTATATTTATGGATTGGTTAATGGNTGGGGNTA]




>consensus_13148#1
CATGGAACTGAAGGAGTAGAAACCAGAGTTCAAGAGTACCGAGGTGACAGGGGTGGAGAA
TGGCATGGATTTGGATGAGGTGAAGGTGGAGAAGAAGAAGAAGAAAAAGGCGAAGAAAGC
TTCATTGGTGGAAGGTGAGACAGAGGGGGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAA
GAAGGAGAAGAGAGAGAAGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGT
CACGGAACAGAGTACAGACGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGA
GGCTGTTACATTTGATGAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGC
AGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCAAGTGCTTTGCCCGCTAGTGGGAA
AGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGATAGGGTTATCGGTTTCTGATGGAG
ACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAG
TGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGT
GCTTGAGGCTGCCACCATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGC
CTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTG
CAAAGAAGGTCTTGAAGAAGCCTTTCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATT
TCTCTGCATGAACTCTTTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTG
TCTTTTCAACCGTGTTCTATTATTACTTAATTCTTCACCTAGGTTAGTCTTATACGCTGN
TGACTATGCAACAAATCTATATTTATGGATTGGTTAATGGNTGGGGNTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13148#0      CCTTCCCCGGATCAAGCAGCTAGGGTTTCCACCTCTCCCTCCCCCAAATCTTCTCCATGG 60
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      CCGCCGCCGCCGCCGCCGACGCATCGGCCGAGGCCGCGGCCATCGCGCGGCGCCTGGCCT 120
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      CCTGCAACGGCTCCGCACGGGAGCGCGCGGTGCGGCACCTCCTCTCCACCTTCCTCCCGG 180
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      CCTCGGCTCCGCACCTCTCCGCCTCCGACCTCCTCAAGCTCTGGAAGGGCCTCTTCTTCT 240
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      GCTTCTGGCACTCCGACAAGCCGCTCTACCAGTCCTCCCTCGCCACCCGCCTCGCCGCCG 300
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      GCGTCTCCTCGGGCCCCTCGCCGGCCGCCGCCGCCGCCTTCTTCGCCGCCTACCTCGCCA 360
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      CCCTCCGCCGCGAGTGGGTCCACATCGACACCCACCGCCTCGACAAGTTCTACCTCCTCA 420
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      ACCGCAGGTTCCTCCACCACGCCTTCCTCCTCCTCGCCGCCAACTCCTTCGCCGCCGACC 480
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      TCACCTCCCAGGTCGTATCGATCCTGTCGGAGAAGGTACTCCTTCCCGAGGCCGACAACG 540
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      TCGCCGCCGGCTCGCCCCGTGGGCTTGGGTACCATGTCGCCGAGGTGTTTCTGGACGAGC 600
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      TGTCGCCTGTGCTCCCTGTGAGCTTACAGACAATGGAGGTGTTGCTATCTCCTTTCTTCG 660
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      CTGTGTTGGAGAAGTCATCTGATAGGGTGATGGTGGCTAAGGTTAAGTCTAGTGTGTTTG 720
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      AGAGGTTCCTCGAGAGCGGCAAACAATTGCTCGAGATGGCGAAGAAAGGCGAGGGGGTGG 780
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      AGAAGGGGAGCGCAGACGAGAAGATTGGGAAGGTTGGCTTGCTGTTTGGGTTCAGCAAGA 840
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      GGTTCTCAGATATTGGGGCGAAGGCGGAGACCGTGCAAGCAAACCGAAAGGTGCTATTTG 900
consensus_13148#1      ------------------------------------------------------------
                                                                                   

consensus_13148#0      GGCTGAGGGATGCGTTTGTGAAGGTTGAGAAAGGATTGGAGCTCTCTGGGGTCGAGATTG 960
consensus_13148#1      --------------------------------------------CATGGAACTGAAGGAG 16
                                                                     ***    **    *

consensus_13148#0      CTGTG-CCAGAGTTCAAGAGTACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGAT 1019
consensus_13148#1      TAGAAACCAGAGTTCAAGAGTACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGAT 76
                         *   ******************************************************

consensus_13148#0      GAGGTGAAGGTGGAGAAGAAGAAGAAGAAAAAGGCGAAGAAAGCTTCATTGGTGGAAGGT 1079
consensus_13148#1      GAGGTGAAGGTGGAGAAGAAGAAGAAGAAAAAGGCGAAGAAAGCTTCATTGGTGGAAGGT 136
                       ************************************************************

consensus_13148#0      GAGACAGAGGGGGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAAAGAG 1139
consensus_13148#1      GAGACAGAGGGGGCCAAGGATTCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAGAGAG 196
                       ******************************************************* ****

consensus_13148#0      AAGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGAAACAGAGTACA 1199
consensus_13148#1      AAGAAGAAAAAGAAGAAGGTAGAGGTTGTTGATGAGGGAGATGTCACGGAACAGAGTACA 256
                       ************************************************ ***********

consensus_13148#0      GACGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGAT 1259
consensus_13148#1      GACGCTCCTGCAGAGGAGGACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGAT 316
                       ************************************************************

consensus_13148#0      GAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATG 1319
consensus_13148#1      GAGACATTGATGTCCAATCTCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATG 376
                       ************************************************************

consensus_13148#0      GTCAATGGAGGCAGCAGCTCAAGTGCTTTGCCCGCTAGTGGGAAAGCTGCAAAGAAAAGG 1379
consensus_13148#1      GTCAATGGAGGCAGCAGCTCAAGTGCTTTGCCCGCTAGTGGGAAAGCTGCAAAGAAAAGG 436
                       ************************************************************

consensus_13148#0      AAGAGAGCAAAATCTGCAGATAGG-TTATCGGTTTCTGATGGAGACGATGTTAGCAGCGA 1438
consensus_13148#1      AAGAGAGCAAAATCTGCAGATAGGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGA 496
                       ************************ ***********************************

consensus_13148#0      AGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAA 1498
consensus_13148#1      AGGTACAATTATTTCCCAGGATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAA 556
                       ************************************************************

consensus_13148#0      GAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACC 1558
consensus_13148#1      GAATAATCTAGTTTGGAAGCCTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACC 616
                       ************************************************************

consensus_13148#0      ATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGA 1618
consensus_13148#1      ATCTGCTACTCCAAGAGGGAGTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGA 676
                       ************************************************************

consensus_13148#0      AACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAA 1678
consensus_13148#1      AACGCCTACGCCTGTGAAGAAGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAA 736
                       ************************************************************

consensus_13148#0      GAAGCCTTCCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCT 1738
consensus_13148#1      GAAGCCTTTCTCAGCCGCGAAGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCT 796
                       ******** ***************************************************

consensus_13148#0      TTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTT 1798
consensus_13148#1      TTTATGAATTGACACTGCAGTGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTT 856
                       ************************************************************

consensus_13148#0      CTATTATTACTTAATTCTTCACCTAGGTTAGTCTTATACGCTGTTGACTATGCAACAAAT 1858
consensus_13148#1      CTATTATTACTTAATTCTTCACCTAGGTTAGTCTTATACGCTGNTGACTATGCAACAAAT 916
                       ******************************************* ****************

consensus_13148#0      TTATATTTATGGATTGTTTAATGTTGTGTTATGTCATAGCGCATTCATGATAATCATGTG 1918
consensus_13148#1      CTATATTTATGGATTGGTTAATGGNTGGGGNTA--------------------------- 949
                        *************** ******    *   *                            

consensus_13148#0      GGTGATCATTCTTTGGAATTAGCAGTAGCAATTTTGATCTGGAAAAAAAAAA 1970
consensus_13148#1      ----------------------------------------------------