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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13149#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 399 fasta sequence
[TACAGTGTGGTTGTTGCTAGTCGATCAGTTATACCAAAGTGTAGAACACTAATATAAGCTCAGATCTACACGAGACCGAACCTCTCGAACCCTTTCTTGCTACAGTAAATTCCCCACCCTCGACCCCTCTTCCTCCTCGATTCCGGCGACCTCGTCGCG-CNG-NG-CGG-G-A-GG-G-AGA--GGGGTCGTCCCCCCTCCCCCATAGTAGTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC-G-GA-TTGTGACCAGCGACGGTGGAGGCGACGAGGTTACGGCTCGCAACTGCGA-TGGCGACGCGGATACGACCCGAGGCGACGGNGGCCGCCACCGGNGGTTGAGCTTT]
[+] EMBL OSC022 [TACAGTGTGGTTGTTGCTAGTCGATCAGTTATACCAAAGTGTAGAACACTAATATAAGCTCAGATCTACACGAGACCGAACCTCTCGAACCCTTTCTTGCTACAGTAAATTCCCCACCCTCGACCCCTCTTCCTCCTCGATTCCNGCGACCTCG GCG GNG N CGG GNA GGTG AGA GGGGTCGTCCCCCCTCCCCCATAGTAGTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAA ]
[+] EMBL AU172939 [ AAGCTCAGATCTACACGAGACCGAACCTCTCGAACCCTTTCTTGCTACAGTAAATTCCCCACCCTCGACCCCTCTTCCTCCTCGATTCCGGCGACCTCGTCGC CGGCGG CGG G A GG GNANAAGGGGGTCNTCCCCCCTCCCCCATAGTANTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC GCGA TTGTGACCAGCGACGGTGGAGGCGACGAGGTTACGGNTCGCAACTGCGA TGGCGACGCGGATACGACCCGAGGCGACGGNG ]
[+] EMBL AU172938 [ AAGCTCAGATCTACACGAGACCGAACCTCTCGAACCCTTTCTTGCTACAGTAAATTCCCCACCCTCGACCCCTCTTCCTCCTCGATTCCGGCGACCTCGTCGC CGGCGG CGG G A GG GAAGAG GGGGTCGTCCCCCCTCCCCCATAGTAGTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC GCGA TTGTGACCAGCGACGGTGGAGGCGACGAGGTTACGGNTCGCAACTGCGA TGGCGACGCGGATACGACCCGAGGCGACGGNG ]
[+] EMBL AU064608 [ AAGCTCAGATCTACACGAGACCGAACCTCTCGAACCCTTTCTTGCTACAGTAAATTCCCCACCCTCGACCCCTCTTCCTCCTCGATTCCGGCGACCTCGTCNC CNG G CGGNGNA GG G AGA GGGGTCGTCCCCCCTCCCCCATAGTAGTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC G GA TTGTGACCAGCGACGGTGGAGGCGACGAGGTTACGGCTCGCAACTGCGA TGGCGACGCGGATACGACCCGAGGC ]
[+] EMBL AU065062 [ AAGCTCAGATCTACACGAGACCGAACCTCTCGAACCCTTTCTTGCTACAGTAAATTCCCCACCCTCGACCCCTCTTCCTCCTCGATTCCGGCGACCTCGTCG G CTG TG CGGTGAA GG G AGA GGGGTCGTCCCCCCTCCCCCATAGTAGTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGACGG GA TTGTGACCAGCGACGGTGGAGGCGACGAGGTTACGGCTCGCAACTGCGA TGGCGACGCGGATACGACC ]
[+] EMBL AU064579 [ AAGCTCAGATCTACACGAGACCGAACCTCTCGAACCCTTTCTTGCTACAGTAAATTCCCCACCCTCGACCCCTCTTCCTCCTCGATTCCGGCGACCTCGTCG G CAG NG CGGNG A GG G AGA GGGGTCGTCCCCCCTCCCCCATAGTAGTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC G GA TTGTGACCAGCGACGGTGGAGGCGACGAGGTTACGGCTCGCAACTGCGA TGGCGACGCGGATACGACC ]
[+] EMBL AU064176 [ AAGCTCAGATCTACACGAGACCGAACCTCTCGAACCCTTTCTTGCTACAGTAAATTCCCCACCCTCGACCCCTCTTCCTCCTCGATTCCGGCGACCTCGTCGCGACNG NG CGG G A GG G AGA GGGGTCGTCCCCCCTCCCCCATAGTAGTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC GNGA TTNTGACCAGCGACGGTGGAGGCGACGAGGTTACGGCTCGCAACTGCGATTGGCGACGNGGATACGACCCNAGGCGACGGCGGCCGC ]
[+] EMBL C74623 [ AGCTCAGATCTACACGAGACCGAACCTCTCGAACCCTTTCTTGCTACAGTAAATTCCCCACCCTNGACCCCTCTTCCTNCTCGATTCCGGCGACCTCGTC NG CTG NG CGGNT A GG G AGA GGGGTCGTCCCCCCTCCCCNATAGTAGTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC G GA TTGTGACCAGCGACGGTGGAGGCGACGAGGTTACGGCTCGNAACTGCGA TNGCGACGCGG ]
[+] EMBL C28972 [ CGAACCCTTTNTTGCTACAGTAAATTCCCCACCCTCGACCCCTCTTCCTCCTCGATTCCNGCGACCT CG CNG NGNCGG G ATGG G AGA GGGGTCGTCCCCCCTCCCCCATAGTAGTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC G AATTTGTGACCAGCGACGGTNGAGGCGACGAGGTTACGG ]
[+] EMBL OS0439A [ TTTCTTGCTACAGTAAATNCCCCACCCTCGACCCCTCTTCCTCCTCGATTCCGGCGACCTCGTCGCG CTG G CGG GNN GG G AGA GGGGTCGTCCCCCCTCCCCCATAGTAGTTACGTAGTCGGGCTAGTCTCGTTAGGTCGGGTTCTTCCCGTTTTCTTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC GCGA TTGTGACCAGCGACGGTGGAGGCGACGAGGTTACGGCTCGCAACTGCGA TNGNGACGCGGATACGACCCGAGGCGACGGNGGCCGGCACCGGNGGTTGAGCTTT]
[+] EMBL OSC4591 [ CCACCCTNGANCCCTCTTCCTCCTCGATTCCGGCGACCTCGTCG N CTG NG CGG GNA GG G AGA GGGGTCGTCCCCCCTCCCCCATAGTAGTTACGTAGTCGGGCTAGTNTCGTTAGGTCGGGTTCTTCCCGTTTNNTTCTCGTTAGTNAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC G GA TTTTAACCAGCGACGGTGGAGGCGACGAGGTTACGGCTCGCAACTNCNA TGGCGACGCGGATACGACC ]
[+] EMBL AU165002 [ TTCTCGTTAGTGAGGCGATGGAAGTTGGAGATGGCGGCGGCGAC G GA TTGTNACCAGCGACGGTGGAGGCGACGAGGTTACGGCTCGCAACTGCNA TGGCGACGCGGATACGACC ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||