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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13167#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2732 fasta sequence
[CTTTGCCGAATTGCCGTGGCCTCGCGGCACTCCCTCCTCTCTCGCAGACTCGCAGTAGTATGCTAGGGATGAGAATATGAGATGCCTCTCCCAATTCATGGCGCCGCCGTCCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGAGGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTCGGGCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCAACCTCTCGGTTCATGAAATACGTGATCTCTTTTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCATCGGTGAAATCTGGCAGAGAGTGATACTTGTTCCAGTCAGTGGAGGCATTATAGTTGGAGTGTTTAAC-ACATTAAGAAGTTCTATAGCAACCAACTCAAATGACACTATGTCTAAGATAAAAGGTGCCTTTAGGCCATTTTTGAAAGCCATGGCAGCATCTTTTACTCTTGGAACTGGAAATTCTTTGGGGCCTGAGGGTCCAAGTGTGGAGATTGGTTCATCTATAGCCAAAGGATTTGGAAATGTGTTTAAATTGGAAGGAGGGAAAAAACTTTCTCTTGTGGCAGCTGGATCAGCAGCTGGAATCGCATCAGGTTTTAATGCTGCTGTTGCCGGGTGCTTTTTCGCCGTGGAATCTGTTTTGTGGCCTACTTCTGTTGACTCTTCATCCCTTTCCAACTCAACACCTATGGTGATACTCAGTGCAGTGATAGCGTCTGTTGTTTCAGAGATTGGTCTTGGTTCTGATCCTGCTTTTACCGTTCCAGAATATGATTTCCGCTCGCCAACAGAGATTGAAAGTATGAGGATATTTACATGACTTAATAAATGTCAGAACTTCCTCTATATCTTTTGCTGGGCATCTTCTGTGGGTTGGTGTCTACTACACTATCTAGGTGTACAGCACTTTCTATGGAGATAGTTCAAAGTTTACAAACGGCAACCGGATTACCAAAGGCTGCATCTCCTGCCTTGGGTGGCCTTATTGTTGGTCTTCTAGCCCTTGTATACCCTGAAGTTCTTTATTGGGGCTTTGAAAATGTTGATATTTTGCTGGAATCACGACCATTCACAAGTGGACTCTCAGCAGCTGTATTGGTTCAGCTCATTGGAGTAAAAGTATTGGCGACATCTTTGTGCAGGGCTTTTGGATTGGTTGGAGGCTATTATGCACCATCCCTTTTTATTGGTGCAGCTACAGGCATGGCGTATGGAAAGGTCGTGAGGTTTACATTTACTGGCCCGGATTCACTGTTCCAAATCCCGTTCCTAGATGTGGCGTCACCTCAAGCATATGGCCTGGTAGGTATGGCAGCCACGCTTGCTGGTGTATGCAAGGTGCCTCTTACATCTGTCCTCCTACTGTTTGAGCTTACTCAGGACTATCGTATAGTTTTACCTTTGCTTGGTGCTGTTGGAGTATCATCTTGGATTGCTTCTCCCCAGAGGTTCTCTAGGAGCAATAGGAGTAAGCCGGATTCCTCAGAGGTGAAATCAAGTAATTTTAAACAGGAAAAAAGTGTGCCCTCCCAGACACAAGGAGCTTCTGTGGATACAGATAAGCCTATTACCGACCTATGTAAGCTTGAAAGTTCACTGTGTGTCTATGATGCCAAGCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCACTGTACGATTTATTGCAAGAGCAACAAAATGAAGTATATTCATCTAGGAAGCGAGACCTCAAGGTAGATCAATGTAATCTGGAGCACGAGGTCAATTGGTCAAATGAAATATACGTAAAAGGTACGGTTAATAAATGCAGTATGGCGTGTGGAAGAAATTACTA]
[+] EMBL AK100296 [CTTTGCCGAATTGCCGTGGCCTCGCGGCACTCCCTCCTCTCTCGCAGACTCGCAGTAGTATGCTAGGGATGAGAATATGAGATGCCTCTCCCAATTCATGGCGCCGCCGTCCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGAGGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTCGGGCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCAACCTCTCGGTTCATGAAATACGTGATCTCTTTTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCATCGGTGAAATCTGGCAGAGAGTGATACTTGTTCCAGTCAGTGGAGGCATTATAGTTGGAGTGTTTAAC ACATTAAGAAGTTCTATAGCAACCAACTCAAATGACACTATGTCTAAGATAAAAGGTGCCTTTAGGCCATTTTTGAAAGCCATGGCAGCATCTTTTACTCTTGGAACTGGAAATTCTTTGGGGCCTGAGGGTCCAAGTGTGGAGATTGGTTCATCTATAGCCAAAGGATTTGGAAATGTGTTTAAATTGGAAGGAGGGAAAAAACTTTCTCTTGTGGCAGCTGGATCAGCAGCTGGAATCGCATCAGGTTTTAATGCTGCTGTTGCCGGGTGCTTTTTCGCCGTGGAATCTGTTTTGTGGCCTACTTCTGTTGACTCTTCATCCCTTTCCAACTCAACACCTATGGTGATACTCAGTGCAGTGATAGCGTCTGTTGTTTCAGAGATTGGTCTTGGTTCTGATCCTGCTTTTACCGTTCCAGAATATGATTTCCGCTCGCCAACAGAGATTGAAAGTATGAGGATATTTACATGACTTAATAAATGTCAGAACTTCCTCTATATCTTTTGCTGGGCATCTTCTGTGGGTTGGTGTCTACTACACTATCTAGGTGTACAGCACTTTCTATGGAGATAGTTCAAAGTTTACAAACGGCAACCGGATTACCAAAGGCTGCATCTCCTGCCTTGGGTGGCCTTATTGTTGGTCTTCTAGCCCTTGTATACCCTGAAGTTCTTTATTGGGGCTTTGAAAATGTTGATATTTTGCTGGAATCACGACCATTCACAAGTGGACTCTCAGCAGCTGTATTGGTTCAGCTCATTGGAGTAAAAGTATTGGCGACATCTTTGTGCAGGGCTTTTGGATTGGTTGGAGGCTATTATGCACCATCCCTTTTTATTGGTGCAGCTACAGGCATGGCGTATGGAAAGGTCGTGAGGTTTACATTTACTGGCCCGGATTCACTGTTCCAAATCCCGTTCCTAGATGTGGCGTCACCTCAAGCATATGGCCTGGTAGGTATGGCAGCCACGCTTGCTGGTGTATGCAAGGTGCCTCTTACATCTGTCCTCCTACTGTTTGAGCTTACTCAGGACTATCGTATAGTTTTACCTTTGCTTGGTGCTGTTGGAGTATCATCTTGGATTGCTTCTCCCCAGAGGTTCTCTAGGAGCAATAGGAGTAAGCCGGATTCCTCAGAGGTGAAATCAAGTAATTTTAAACAGGAAAAAAGTGTGCCCTCCCAGACACAAGGAGCTTCTGTGGATACAGATAAGCCTATTACCGACCTATGTAAGCTTGAAAGTTCACTGTGTGTCTATGATGCCAAGCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAGTCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTTTTGGTTGGTTTTGTAGATGAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGGTATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTT ]
[+] EMBL CB679684 [ TACGGATGAGAATATGAGATGCCTCTCCCAATTCATGGCGCCGCCGTCCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGAGGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTAGGGCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCGACCTCTCGGTTCATGAAATACGTGATCTCTATTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCCTCGGTGAAATCTGGGAGAGAGTGATACTTGTTCCAGTCGCTGGAGGTATTATAGCTGGAGTGTTGAACTTCATTAAGAAGTTCTATAGCAACCAACTCAAATG ]
[+] EMBL CB623038 [ CTCCCAATTCATGGCGCCGCCGTCCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGATGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTCGGGCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCAACCTCTCGGTTCATGAAATACGTGATCTCTTTTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCATCGGTGAAATCTGGCAGAGAGTGATACTTGTTCCAGTCAGTGGAGGCATTATAGTTGGAGTGTTTAAC ACATTAAGAAGTTCTATAGCAACCAACTCAAATGACACTATGTCTAAGATAAAAGGTGCCTTTAGGCCATTTTTGAAAGCCATGGCAGCATCTTTTACTCTTGGAACTGGAAATTCTTTGGGGCCTGAGGGTCCAAGTGTGGAGATTGGTTCATCTATAGCCAAAGGATTTGGAAATGTGTTTAAATTGGAAGGAGGAAAAAAACTTTCTCTTGTGGCAGCTGGATCAGCAGCTGGAATCGCATCAGGTTTTAATGCTGCTGTTGCCGGGTGCTTTTTCGCCGTGGAATCTGTGTTGTGGCCTACTc ]
[+] EMBL CB642971 [ TGGCGCCTTCGACCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGAGGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTCGGGCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCGACCTCTCGGTTCATGAAATACGTGATCTCTTTTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCATCCGTGAAATCTGGCAGAGAGTGATACTTGTTCCAGTCAGTGGAGGCATTATAGGTGGAGTGTTTAAC ACATTAAGAAGTTCTATAGCAACCAACTCAAATGACACTATGTCTAAGATAAAAGGTGCCTTTAGGCCATTTTTGAAAGCCATGGCAGCATCTTTTACTCTTGGAACTGGAAATTCTTTGGGGCCTGAGGGTCCAAGTGTGGAGATTGGGTCGTCTATAGCCAAAGGATTTGGATATGTGCTTAAATTGGAAGGAGGGAAAAAACTTTCTCTTGTGG ]
[+] EMBL CB643010 [ TGGCCCCTCCGGCCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGAGGAGGA ]
[-] EMBL CB623039 [ aTTTAAACAGGAAAAAAGTGTGCCCTCCCATACACAAGGAGCTTCTGTGGATACAGATAAGCCTATTACCGACCTATGTAAGCTTGAAAGTTCACTGTGTGTCTATGATGCCAAGCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAAAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTT AAGAGCGTTTAGTTTTGCACAAGTGGAT ]
[+] EMBL CB683500 [ GAGCCTCTGTGGATACAGATAAGCCTATTACCGACCTATGTAAGCTTGAAAGTTCACTGTGTGTCTATGATGCCAAGCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACCAGTATTTTTAGA ]
[-] EMBL CB642972 [ GCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTGGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGA ]
[-] EMBL CB643011 [ AATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGGGACTCAGAAACGTACTGTTGAAGGCCCTTTAGTTTTGCACAAGTGGATATATNCGTTTTTATTtctttaa ]
[-] EMBL CB679685 [ CACT AATTTTATGC TGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCACTGTACGATTTATTGCAAGAGCAACAAAATGAAGTATATTCATCTAGGAAGCGAGACCTCAAGGTAGATCAATGTAATCTGGAGCACGAGGTCAATTGGTCAAATGAAATATACGTAAAAGGTACGGTTAATAAATGCA ]
[-] EMBL CB683892 [ AAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCACTGTACGATTTATTGCAAGAGCAACAAAATGAAGTATATTCATCTAGGAAGCGAGACCTCAAGGTAGATCAATGTAATCTGGAGCACGAGGTCAATTGGTCAAATGAAATATACGTAAGTGCTACGGTTAATAAATGCAGTATGGCGTGTGGAAGAAATTACTA]
consensusID : consensus_13167#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 714 fasta sequence
[CGTTTGTTATGATAATTGAGAGCAACAGATCTTTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTTTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATTTTTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACCCAGTTTTGATATTTCATCCCAAAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCCCAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCCCTGTACGATTTATTGCAAGAGCAACAAAATAAGGGATATTCATTTAAAAAAAAAAAAAAAAAAAAACATAAAGGGA]
[-] EMBL CB618501 [CGTTTGTTATGATAATTGAGAGCAACAGATCTTTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTTTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATTTTTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACCCAGTTTTGATATTTCATCCCAAAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCCCAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCCCTGTACGATTTATTGCAAGAGCAACAAAATAAGGGATATTCATTTAAAAAAAAAAAAAAAAAAAAACATAAAGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13167#0 CTTTGCCGAATTGCCGTGGCCTCGCGGCACTCCCTCCTCTCTCGCAGACTCGCAGTAGTA 60
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 TGCTAGGGATGAGAATATGAGATGCCTCTCCCAATTCATGGCGCCGCCGTCCGTGGCACC 120
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 CTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCG 180
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 CCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATG 240
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 CGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTG 300
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GGAGGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTCGG 360
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCAACCTCTCGGTTCATGAAATACGTGATCT 420
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 CTTTTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCATCGGTGA 480
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 AATCTGGCAGAGAGTGATACTTGTTCCAGTCAGTGGAGGCATTATAGTTGGAGTGTTTAA 540
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 CACATTAAGAAGTTCTATAGCAACCAACTCAAATGACACTATGTCTAAGATAAAAGGTGC 600
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 CTTTAGGCCATTTTTGAAAGCCATGGCAGCATCTTTTACTCTTGGAACTGGAAATTCTTT 660
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GGGGCCTGAGGGTCCAAGTGTGGAGATTGGTTCATCTATAGCCAAAGGATTTGGAAATGT 720
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GTTTAAATTGGAAGGAGGGAAAAAACTTTCTCTTGTGGCAGCTGGATCAGCAGCTGGAAT 780
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 CGCATCAGGTTTTAATGCTGCTGTTGCCGGGTGCTTTTTCGCCGTGGAATCTGTTTTGTG 840
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GCCTACTTCTGTTGACTCTTCATCCCTTTCCAACTCAACACCTATGGTGATACTCAGTGC 900
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 AGTGATAGCGTCTGTTGTTTCAGAGATTGGTCTTGGTTCTGATCCTGCTTTTACCGTTCC 960
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 AGAATATGATTTCCGCTCGCCAACAGAGATTGAAAGTATGAGGATATTTACATGACTTAA 1020
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 TAAATGTCAGAACTTCCTCTATATCTTTTGCTGGGCATCTTCTGTGGGTTGGTGTCTACT 1080
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 ACACTATCTAGGTGTACAGCACTTTCTATGGAGATAGTTCAAAGTTTACAAACGGCAACC 1140
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GGATTACCAAAGGCTGCATCTCCTGCCTTGGGTGGCCTTATTGTTGGTCTTCTAGCCCTT 1200
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GTATACCCTGAAGTTCTTTATTGGGGCTTTGAAAATGTTGATATTTTGCTGGAATCACGA 1260
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 CCATTCACAAGTGGACTCTCAGCAGCTGTATTGGTTCAGCTCATTGGAGTAAAAGTATTG 1320
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GCGACATCTTTGTGCAGGGCTTTTGGATTGGTTGGAGGCTATTATGCACCATCCCTTTTT 1380
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 ATTGGTGCAGCTACAGGCATGGCGTATGGAAAGGTCGTGAGGTTTACATTTACTGGCCCG 1440
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GATTCACTGTTCCAAATCCCGTTCCTAGATGTGGCGTCACCTCAAGCATATGGCCTGGTA 1500
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GGTATGGCAGCCACGCTTGCTGGTGTATGCAAGGTGCCTCTTACATCTGTCCTCCTACTG 1560
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 TTTGAGCTTACTCAGGACTATCGTATAGTTTTACCTTTGCTTGGTGCTGTTGGAGTATCA 1620
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 TCTTGGATTGCTTCTCCCCAGAGGTTCTCTAGGAGCAATAGGAGTAAGCCGGATTCCTCA 1680
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GAGGTGAAATCAAGTAATTTTAAACAGGAAAAAAGTGTGCCCTCCCAGACACAAGGAGCT 1740
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 TCTGTGGATACAGATAAGCCTATTACCGACCTATGTAAGCTTGAAAGTTCACTGTGTGTC 1800
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 TATGATGCCAAGCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACT 1860
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 AAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTG 1920
consensus_13167#1 ------------------------------------------------------------
consensus_13167#0 GAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACT 1980
consensus_13167#1 ----------CGTTTGTTATGATAATTGAGAGCAACAGATCTTTAATAGGCTTGGTAACT 50
******************************** *****************
consensus_13167#0 CTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAA 2040
consensus_13167#1 CTCAAAGATATCCAGGATTTTTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAA 110
******************** ***************************************
consensus_13167#0 CCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAG 2100
consensus_13167#1 CCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAG 170
************************************************************
consensus_13167#0 ACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTA 2160
consensus_13167#1 ACATTTTTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTA 230
**** * *****************************************************
consensus_13167#0 GTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAA 2220
consensus_13167#1 GTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAA 290
************************************************************
consensus_13167#0 GGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAG 2280
consensus_13167#1 GGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAG 350
************************************************************
consensus_13167#0 ATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATC 2340
consensus_13167#1 ATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACCCAGTTTTGATATTTCATC 410
***************************************** ***** ************
consensus_13167#0 CCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGG 2400
consensus_13167#1 CCAAAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGG 470
*** ********************************************************
consensus_13167#0 ACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTA 2460
consensus_13167#1 ACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTA 530
************************************************************
consensus_13167#0 CTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTG 2520
consensus_13167#1 CTGTTGAAGGGCCTTTAGTTTTGCCCAAGTGGATATATGCGGTTTTATTGCACCAGCGTG 590
************************ ***********************************
consensus_13167#0 CTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCACTGTACGATTTA 2580
consensus_13167#1 CTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCCCTGTACGATTTA 650
*********************************************** ************
consensus_13167#0 TTGCAAGAGCAACAAAATGAAGTATATTCATCTAGGAAGCGAGACCTCAAGGTAGATCAA 2640
consensus_13167#1 TTGCAAGAGCAACAAAATAAGGGATATTCATTTAAAAAAAAAAAAAAAAAAAAACATAAA 710
****************** * * ******** ** ** * * ** * ** **
consensus_13167#0 TGTAATCTGGAGCACGAGGTCAATTGGTCAAATGAAATATACGTAAAAGGTACGGTTAAT 2700
consensus_13167#1 GGGA-------------------------------------------------------- 714
* *
consensus_13167#0 AAATGCAGTATGGCGTGTGGAAGAAATTACTA 2732
consensus_13167#1 --------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||